Clc09G18230 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTATTATTGGTGGAGGTATTGGTATTGGCGTTGAGCTTCCCGGTATAGGTGGCGGAGGCATCGGCATCGGGGGTGGCATCAACATCGGTATTGGCGGTACCGGCGATAACAGTGGTAGCGGCGGTAGTGGCGCATCCCCATGGGTTCAAATTTTCGATCTAGACAGCCCCATAGTTCCAGAAGTTGCAAGGTTTTCAGTGGAACGTTTCAACCTGGACCATAATAATACACTCAGGTACCAACACGTTTATGAAGGTTGGGTTCAGTTCGTGGATGAAAACACCAAAAGGTATCGTCTCAAATTAACAGTCCTAGACTGTTTGGAACGTTTGCTCAGGTTTGAGGTTATTGTGTGTGAAGTAACAAATGGCGATGACAAGTATAAACTTGAATCCTTCGTGCAAATCCACTAA ATGAGTATTATTGGTGGAGGTATTGGTATTGGCGTTGAGCTTCCCGGTATAGGTGGCGGAGGCATCGGCATCGGGGGTGGCATCAACATCGGTATTGGCGGTACCGGCGATAACAGTGGTAGCGGCGGTAGTGGCGCATCCCCATGGGTTCAAATTTTCGATCTAGACAGCCCCATAGTTCCAGAAGTTGCAAGGTTTTCAGTGGAACGTTTCAACCTGGACCATAATAATACACTCAGGTACCAACACGTTTATGAAGGTTGGGTTCAGTTCGTGGATGAAAACACCAAAAGGTATCGTCTCAAATTAACAGTCCTAGACTGTTTGGAACGTTTGCTCAGGTTTGAGGTTATTGTGTGTGAAGTAACAAATGGCGATGACAAGTATAAACTTGAATCCTTCGTGCAAATCCACTAA ATGAGTATTATTGGTGGAGGTATTGGTATTGGCGTTGAGCTTCCCGGTATAGGTGGCGGAGGCATCGGCATCGGGGGTGGCATCAACATCGGTATTGGCGGTACCGGCGATAACAGTGGTAGCGGCGGTAGTGGCGCATCCCCATGGGTTCAAATTTTCGATCTAGACAGCCCCATAGTTCCAGAAGTTGCAAGGTTTTCAGTGGAACGTTTCAACCTGGACCATAATAATACACTCAGGTACCAACACGTTTATGAAGGTTGGGTTCAGTTCGTGGATGAAAACACCAAAAGGTATCGTCTCAAATTAACAGTCCTAGACTGTTTGGAACGTTTGCTCAGGTTTGAGGTTATTGTGTGTGAAGTAACAAATGGCGATGACAAGTATAAACTTGAATCCTTCGTGCAAATCCACTAA MSIIGGGIGIGVELPGIGGGGIGIGGGINIGIGGTGDNSGSGGSGASPWVQIFDLDSPIVPEVARFSVERFNLDHNNTLRYQHVYEGWVQFVDENTKRYRLKLTVLDCLERLLRFEVIVCEVTNGDDKYKLESFVQIH Homology
BLAST of Clc09G18230 vs. NCBI nr
Match: XP_038887119.1 (uncharacterized protein LOC120077304 [Benincasa hispida]) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-13 Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0
BLAST of Clc09G18230 vs. NCBI nr
Match: XP_038887120.1 (uncharacterized protein LOC120077305 [Benincasa hispida]) HSP 1 Score: 82.8 bits (203), Expect = 2.5e-12 Identity = 56/133 (42.11%), Postives = 77/133 (57.89%), Query Frame = 0
BLAST of Clc09G18230 vs. NCBI nr
Match: ADN34263.1 (phloem filament protein [Cucumis melo subsp. melo] >KAA0031424.1 phloem filament protein [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 1.8e-10 Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Clc09G18230 vs. NCBI nr
Match: XP_023530867.1 (uncharacterized protein LOC111793278 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.2 bits (178), Expect = 2.0e-09 Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Clc09G18230 vs. NCBI nr
Match: XP_023530959.1 (uncharacterized protein LOC111793346 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.2 bits (178), Expect = 2.0e-09 Identity = 35/88 (39.77%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Clc09G18230 vs. ExPASy TrEMBL
Match: A0A6J1ELQ9 (uncharacterized protein LOC111434515 OS=Cucurbita moschata OX=3662 GN=LOC111434515 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09 Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 0
BLAST of Clc09G18230 vs. ExPASy TrEMBL
Match: A0A6J1EI90 (uncharacterized protein LOC111434592 OS=Cucurbita moschata OX=3662 GN=LOC111434592 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 8.3e-09 Identity = 34/90 (37.78%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Clc09G18230 vs. ExPASy TrEMBL
Match: A0A6J1EQ39 (uncharacterized protein LOC111434636 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08 Identity = 33/90 (36.67%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Clc09G18230 vs. ExPASy TrEMBL
Match: A0A6J1EJ75 (uncharacterized protein LOC111434636 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434636 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08 Identity = 33/90 (36.67%), Postives = 57/90 (63.33%), Query Frame = 0
BLAST of Clc09G18230 vs. ExPASy TrEMBL
Match: A0A0A0K477 (PP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067390 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08 Identity = 51/135 (37.78%), Postives = 69/135 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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