Clc09G16366 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGAAGCTGTTGGCCATGAATTCATGGAAGACTTTTTTGGTTCTTGTGAATCAGTGTTAGCACAAAATGGTCTTCTTCCTCTACAGGTTTAAAATTTTTTATTGCTAACTCCATAAATATTTAAAAAATTATTATAAATAAAAAAAAAGATCGAGCCATTTATAAATATAGAAGTCTATCACATTATCACCTAAAGATAGAGAAGTTTATTATAGTTTATCGTTAACAACACTAAAATTTTTATATATTTATTAATATTTTGACTCATTTTACTATATTTAAAAACAACTTTAAGTATTTTTTTTTTTAATATAATTAATTAATTTTTATATTTTCATTTTATTTTGCATTATTAGTTCATATCATGGCCGGACGAGTCTTATGAAGAATATCGTCTAAGTGCTGGTTTTATCCAAGAATATATATTTCCAGAGGATGTCTACCCTCATTAACTAGAGTAACAACAGCCATATGGCTTCTGCATCTAGACTTAGGTATATAATTATTTAACCTATGATTATTATTATTATTAGGTTGAAATAACATTTTGATCCCTATACTTTGGAGTTTGTTCTATTTTAGTCACTATACTTTTAAATGTCCAAATTTAGTTCTTGTACTTTCAATAAATATTAAATTTAATCTCTACGACTAGTTTGTTGTGGATTTTTTCATTCATTTTTATTTTTTATTAGCATTTTCACTATAATTATTATAATTATTATGATTATTTAATTAATTTTGATAAAAATTAACTTCGAAAGACTAAATTTAAGATTTATTGAAGTATATGAGACTAAAATAGTATTTTAACGTTGTTATTATTGAAGAATAATTAGTCTATGATTTCTAACTATAAGTTTCATGGTTAATTCCCATCTATTTTACAGCGTGGAGCATACTATAAAACATTGAGGTGTTGGAGACAGAATTTCTTGAATAATAAAAGGTAAGAAAGCTTCTTCATATCATATTGTAAAAAAAAAAAAAAAAAAAAAAGAAACCAATTAAAAAATGTGTTTCAAATTATTGAAATATAATTTATATTTATTTTCAGCAAGATACTCGAACTTAGTTTTGATGAAAGTTTCTTCCGAACATGGGAATACTATTTTGATCATTGTGCTGCTGGTTTTAAATCACGTACTCTCGGAGACTATCAAGTATGTTATATATACGTTCATGTTCATGTATGTCCTTACTAAAATCTACAAAAATAGGCTAATTAAATCCTAAGAATTATAAATATTATTGTTAATTAAAAGAAATGTAACTTACTTTTTATTTTTATTTTTATTGTAGATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATCATGA ATGATAGAAGCTGTTGGCCATGAATTCATGGAAGACTTTTTTGGTTCTTGTGAATCACGTGGAGCATACTATAAAACATTGAGGTGTTGGAGACAGAATTTCTTGAATAATAAAAGCAAGATACTCGAACTTAGTTTTGATGAAAGTTTCTTCCGAACATGGGAATACTATTTTGATCATTGTGCTGCTGGTTTTAAATCACGTACTCTCGGAGACTATCAAATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATCATGA ATGATAGAAGCTGTTGGCCATGAATTCATGGAAGACTTTTTTGGTTCTTGTGAATCACGTGGAGCATACTATAAAACATTGAGGTGTTGGAGACAGAATTTCTTGAATAATAAAAGCAAGATACTCGAACTTAGTTTTGATGAAAGTTTCTTCCGAACATGGGAATACTATTTTGATCATTGTGCTGCTGGTTTTAAATCACGTACTCTCGGAGACTATCAAATTGTGTTTTCAAGGCCTGGTAATGTTGCAACTTTCAAAGATCCATCATGA MIEAVGHEFMEDFFGSCESRGAYYKTLRCWRQNFLNNKSKILELSFDESFFRTWEYYFDHCAAGFKSRTLGDYQIVFSRPGNVATFKDPS Homology
BLAST of Clc09G16366 vs. NCBI nr
Match: XP_038877038.1 (tuberculostearic acid methyltransferase UfaA1-like, partial [Benincasa hispida]) HSP 1 Score: 141.4 bits (355), Expect = 3.9e-30 Identity = 75/152 (49.34%), Postives = 82/152 (53.95%), Query Frame = 0
BLAST of Clc09G16366 vs. NCBI nr
Match: XP_038888566.1 (uncharacterized protein LOC120078371 [Benincasa hispida]) HSP 1 Score: 141.0 bits (354), Expect = 5.1e-30 Identity = 78/153 (50.98%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. NCBI nr
Match: XP_038891587.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120080979 [Benincasa hispida]) HSP 1 Score: 136.0 bits (341), Expect = 1.6e-28 Identity = 75/151 (49.67%), Postives = 82/151 (54.30%), Query Frame = 0
BLAST of Clc09G16366 vs. NCBI nr
Match: XP_022973880.1 (uncharacterized protein LOC111472470 isoform X2 [Cucurbita maxima]) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28 Identity = 74/153 (48.37%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. NCBI nr
Match: XP_022973879.1 (uncharacterized protein LOC111472470 isoform X1 [Cucurbita maxima]) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28 Identity = 74/153 (48.37%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy Swiss-Prot
Match: O53732 (Tuberculostearic acid methyltransferase UfaA1 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=ufaA1 PE=1 SV=3) HSP 1 Score: 54.7 bits (130), Expect = 6.3e-07 Identity = 26/62 (41.94%), Postives = 33/62 (53.23%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy TrEMBL
Match: A0A6J1IFX4 (uncharacterized protein LOC111472470 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472470 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 74/153 (48.37%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy TrEMBL
Match: A0A6J1ICH0 (uncharacterized protein LOC111472470 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472470 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 74/153 (48.37%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy TrEMBL
Match: A0A6J1EXS1 (uncharacterized protein LOC111439562 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439562 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28 Identity = 74/153 (48.37%), Postives = 80/153 (52.29%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy TrEMBL
Match: A0A6J1EY68 (uncharacterized protein LOC111439562 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439562 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28 Identity = 74/153 (48.37%), Postives = 80/153 (52.29%), Query Frame = 0
BLAST of Clc09G16366 vs. ExPASy TrEMBL
Match: A0A6J1IB60 (uncharacterized protein LOC111473008 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473008 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.2e-28 Identity = 73/153 (47.71%), Postives = 82/153 (53.59%), Query Frame = 0
BLAST of Clc09G16366 vs. TAIR 10
Match: AT3G23510.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 112.5 bits (280), Expect = 1.8e-25 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of Clc09G16366 vs. TAIR 10
Match: AT3G23470.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 109.4 bits (272), Expect = 1.5e-24 Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of Clc09G16366 vs. TAIR 10
Match: AT3G23530.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 107.1 bits (266), Expect = 7.6e-24 Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 0
BLAST of Clc09G16366 vs. TAIR 10
Match: AT3G23480.2 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 102.4 bits (254), Expect = 1.9e-22 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of Clc09G16366 vs. TAIR 10
Match: AT3G23460.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 101.7 bits (252), Expect = 3.2e-22 Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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