Clc09G16360 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGGCGGGGGTAGCAACGATGGTACTGGCGGCGGCGGCGGAACGAAAAGAAGAAGAAAATTGACAGCGACAATGACAAACGAGAACTGAAATAAGAGAAAGGAGAGAAAGGAGGAAAGAAATGAAGAGTGAAAGGAGAGATATGAGGAGAGAAATGAAGAATGAAAAGAGAGAAATGAAGATGGTGGAGGTGAAAATGAGAGGAAGGGGCTGCCGGTCGGAATTTAAAGCATGGAACTCGTGGACCCCGTCCACGAGTTCGGTCAATGCATGCCTCTGCATGCGTCTGCATGCAGGCTGACACCGGCAGTGCTTCAGGAAATCGTGGACCGGGTCCACGATTTCACAACCCTATTCTTCAAAATTCTTTCTCCCCCACCCTATTTTTCCAAATTCTTTCTCCCCCACCCTATTTTTTGAATTCTTTTTTTAAAAAAATATTATTTTAAAAAAAATTCTAAAATTTAAGGACTATGTATTATATTTTAAAATCTAGTGATCAAATAAAAACTAGATCCAAAATCTAGGAAGGAAGATGATGTTTTTTTCCAAAAATATTTGATGATGGGTCCAAAAACTTCTATTTTGTGACTTTGGTTTTTATTTATTGTGTAGAATCTTGGGGAGAGAAGTCCTCCTTTTCTTGTAACTCATAATCCACAAGAAAAGCCAAAAGAAATATTGGTCAAGTGGTCATCCAGTTCCATCAGTTGGTGCTTTCAAAGCTTTAAAATGAGCTTCATACCATCCAAGGGAGGAGACAACTTTGGTTTTGTGGTGCATATCAAGGTAATTATTTTTCTTCAAAAGAAAAATAAATAAATAAATAAATAAATAAATAAATAAAGTGAGATAAGAGATTTGAATCACAAATTTTATTCGCTTTTAACTTTTAAAGAAAGGTTATTTTATTTTTGCCTTCACTTTTTTATTTGGCATAATATCTATATTTAAAATGGTTGATAATGCTTTTATTTCTAAATTTCATTCTTATTTCTTATTTATGTGTTTTTATACTTTTTCTCAACACATAAATAAACCATTATTTAATTATTTTGATTCATGAATTACATAACAAGTATTTAAAAATAAATATAACATAAAAATTGGATATTTAATTTTATAATATAACATAAAATTAGTTTGACCTTTTTAAATTAAAATGCTAGAGAAAGAAATAAAACGAAAGGTTAAGAAATTAACAAGTGGGAAATGAGAAACTGAAAATAAAATGAGATATCAAAAATGGTAATGTTATCCAAGAGACCCTATTTTGTGTTTGTTAGGGTTCCGTTTCTTGTTTCTTATTTTTGTTTCTATTTTTCATTTTATAAGAAACGGATGTGTTTGATAATTGTTTTCGTTTCTTATTTTCAAAATTTAAGAAACTTTTCGAAAAATTAGAGAAATTTTTGGGAATCACCAAAACTAGTTTCGTGAATTCTGTTCTCACTCGATTTGTTTTTCTTTTCATGTTTCTCTCGCTCTTGCTCTCGCTTCCTTTCTTCACTCATAATCACTTGTATCTCTCTCGCTCTCTCACTCTTGCTCTTTTACTCTCGCAAAGAAAAAACAAGAAAAAAGAAACAAGAAACTGTTATCAAACAACTTTCTGTTTTTGTTTCTTTTTTTTAAGAAACAGGAAACATGAATCGTTGTCAAACTTAATTCTATTTCTTGTTCTCAAAAAAGGAGAAACAGGAAACAAGAAACACAAAACGAGAAACAGGAAACAGAAAACAGAAACATTATCAGACGGGCCCTTAGTTTCTTATTTCCTATTTCTATTTATTGTTCCTCATTTCCTCTTTCTTTTTTTTTTTTTTTTTTTTTTCTTCTTTTTTATGAAGAAAGATTAGTAGACTAAAATAATAGGTTTGGTAACTATCCACTATGTCTTGCTCTCTCAAATTTAAATAATTAAAAAAATGGAAGTCTTACCTAAGATTAACAATTTAAAATAAGATATTCAAAATTATTATAATGTTATATAATAAATTTTTAACATTTATTGTACATTTTAAAAGTGGAAAATAATAAAGTAATACTTTTACTAGTTTAAAAAAATGGTAAAAGAGAATAAAAAACGAAAGGTTAAAGTGTTAATATAATCAAATTTACTCTAATCCATCAACTTAAACTTTTCAATCAATCCGTAATTTAGAAACTCAACCTTGTTTCTAAATAACACAACTTTGATGAAAGAAGTACAAAACTACAGCCATATAAGAAAACAAAAATGCATATACTTTTCAAATACTAAAAACAAGAAAAGAGAAACAACATTGATGAAACTTGAATATGCAATAACATGCATATTCAATTCCTTTGATGTTATGTTCTAGCATGGCATGTGTTGATTGTGTGCTGCCTTTTTTCTTTAGGTTATGGCTCCCTTGAGGATGAGGTTAAGGTAATGATTGCTACCTGCACTTTAATTTTGATTTTGGTATTTGCAAAACCTACATTATGATTTTTTTTCTCTTCCCTCGATTTATTACCAAGATTTTTATCTTCTTTAGTAAAAAAGTTGAATTCTTAATCAAATTTCTTAAGCAAAAATGAGTTTTTAAAAGCTCCAACTTTTTTTAGCTTCTAAAATTTGGCTTGGTTTTTAAAATCATTGGAAGAAAATAATGTAGATAACAAAGTAAGACATCTAGAGGTGGAAGAAGTGTTTAGAGGCTAAATTTTGAAAAATTAAAAATCAAATAATTAGTAAACGAGACGTTAAACATTATTGCAGGCAGGTATGATTGCAGCACATGATGTTTTGGGAAAAAATTGGAGTGTTTTGAGCAATCCAAAGCACATGGTACCTTCTCTAACAGAAAGAGGAGCACGCCTTTCGGTCACAAGATTTCTTCGTCAATACATATCTACTGGATCATTAACGTGAGCCACTACAATACTACATTAATTTTAGGGATGTTTTAAAAAATAGAAAAATGGTTGAAGATAATTACAAATATAGCAAAATTTTACTTTCTATCTATGATAGACCGCGATAGATTTAGATAGACATCTATCACTTTGCCAGATAGACATAGATAAATGTCTATTTGGATCTATCATAGTCTATCACATATAAGAAGTAAAATTTTGCTATATTTGTAAATTAGTTTGATATTTTTTTTATTTATAACCATTATTCTTCTATCGTTGTTTACGATTGTAATCTCTTTTATAGTGTATCATGAGAACTCATATTAGTTTATTTTATGACACAGTATAATGGAAGAAGGGGGGAAAGTATTTACCTTCAAGGGAATAATAAGTAACAAGTTGCCCCAAAAGGTTGTTTTAAGAGTTCACAGCCCTCAATTTTATTGGAAGGTATTTAACTTGATTATTTAATTAATTAATTAATATAGTAGTTTGATGTATATTTTCAAAAAATGTATATACCATAGGATAAGTTAATTTATTGTTACTCAAATTAATTTGTTTTGACAGGTTAATGACACAAGCTGACATAGGTCTTGGAGAAGCATATATCAATGGAGACTTTTCATTTATGGATAAAGATGAAGGTCTTCTTAACCTTATTTTGGTGAGATTAATTATTTTATTTAATTTTTTTCAGTCATTTAAATATCATTTTTTCTCAATGTTGTTAAGTGATCTAAATAGACTCTTTCATACTTAATTATTTTCTCATTTACATGCAGGTTCTCATAGCTAATAAAGATACAAATTCTTCCATTGCAAAACTAAAGAAGAGAAGGTAA ATGGCGGCGGCGGGGGTAGCAACGATGGCTGACACCGGCAGTGCTTCAGGAAATCGTGGACCGGGTTATGGCTCCCTTGAGGATGAGGTTAAGGCAGGTATGATTGCAGCACATGATGTTTTGGGAAAAAATTGGAGTGTTTTGAGCAATCCAAAGCACATGGTACCTTCTCTAACAGAAAGAGGAGCACGCCTTTCGGTCACAAGATTTCTTCGTCAATACATATCTACTGGATCATTAACGTTAATGACACAAGCTGACATAGGTCTTGGAGAAGCATATATCAATGGAGACTTTTCATTTATGGATAAAGATGAAGGTCTTCTTAACCTTATTTTGGTTCTCATAGCTAATAAAGATACAAATTCTTCCATTGCAAAACTAAAGAAGAGAAGGTAA ATGGCGGCGGCGGGGGTAGCAACGATGGCTGACACCGGCAGTGCTTCAGGAAATCGTGGACCGGGTTATGGCTCCCTTGAGGATGAGGTTAAGGCAGGTATGATTGCAGCACATGATGTTTTGGGAAAAAATTGGAGTGTTTTGAGCAATCCAAAGCACATGGTACCTTCTCTAACAGAAAGAGGAGCACGCCTTTCGGTCACAAGATTTCTTCGTCAATACATATCTACTGGATCATTAACGTTAATGACACAAGCTGACATAGGTCTTGGAGAAGCATATATCAATGGAGACTTTTCATTTATGGATAAAGATGAAGGTCTTCTTAACCTTATTTTGGTTCTCATAGCTAATAAAGATACAAATTCTTCCATTGCAAAACTAAAGAAGAGAAGGTAA MAAAGVATMADTGSASGNRGPGYGSLEDEVKAGMIAAHDVLGKNWSVLSNPKHMVPSLTERGARLSVTRFLRQYISTGSLTLMTQADIGLGEAYINGDFSFMDKDEGLLNLILVLIANKDTNSSIAKLKKRR Homology
BLAST of Clc09G16360 vs. NCBI nr
Match: XP_038888566.1 (uncharacterized protein LOC120078371 [Benincasa hispida]) HSP 1 Score: 157.1 bits (396), Expect = 1.0e-34 Identity = 90/146 (61.64%), Postives = 102/146 (69.86%), Query Frame = 0
BLAST of Clc09G16360 vs. NCBI nr
Match: XP_021801550.1 (uncharacterized protein LOC110745730 isoform X3 [Prunus avium]) HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. NCBI nr
Match: PQP98618.1 (uncharacterized protein Pyn_14166 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. NCBI nr
Match: XP_021801549.1 (uncharacterized protein LOC110745730 isoform X2 [Prunus avium]) HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. NCBI nr
Match: XP_021801547.1 (uncharacterized protein LOC110745730 isoform X1 [Prunus avium] >XP_021801548.1 uncharacterized protein LOC110745730 isoform X1 [Prunus avium]) HSP 1 Score: 149.1 bits (375), Expect = 2.8e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. ExPASy TrEMBL
Match: A0A6P5RI30 (uncharacterized protein LOC110745730 isoform X1 OS=Prunus avium OX=42229 GN=LOC110745730 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. ExPASy TrEMBL
Match: A0A314Y176 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_14166 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. ExPASy TrEMBL
Match: A0A314ZDY7 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_25660 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. ExPASy TrEMBL
Match: A0A6P5RF36 (uncharacterized protein LOC110745730 isoform X2 OS=Prunus avium OX=42229 GN=LOC110745730 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. ExPASy TrEMBL
Match: A0A6P5R9G9 (uncharacterized protein LOC110745730 isoform X3 OS=Prunus avium OX=42229 GN=LOC110745730 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.3e-32 Identity = 82/145 (56.55%), Postives = 96/145 (66.21%), Query Frame = 0
BLAST of Clc09G16360 vs. TAIR 10
Match: AT3G23530.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 135.2 bits (339), Expect = 3.8e-32 Identity = 73/140 (52.14%), Postives = 92/140 (65.71%), Query Frame = 0
BLAST of Clc09G16360 vs. TAIR 10
Match: AT3G23510.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 134.8 bits (338), Expect = 5.0e-32 Identity = 73/140 (52.14%), Postives = 91/140 (65.00%), Query Frame = 0
BLAST of Clc09G16360 vs. TAIR 10
Match: AT3G23480.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 104.4 bits (259), Expect = 7.3e-23 Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Clc09G16360 vs. TAIR 10
Match: AT3G23480.2 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 104.4 bits (259), Expect = 7.3e-23 Identity = 60/132 (45.45%), Postives = 77/132 (58.33%), Query Frame = 0
BLAST of Clc09G16360 vs. TAIR 10
Match: AT3G23470.1 (Cyclopropane-fatty-acyl-phospholipid synthase ) HSP 1 Score: 100.5 bits (249), Expect = 1.0e-21 Identity = 59/133 (44.36%), Postives = 76/133 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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