Clc09G13890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G13890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr09: 15993065 .. 15993502 (-)
RNA-Seq Expression	Clc09G13890
Synteny	Clc09G13890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAAATAATCTCAAACATTTCATGAGATTCCTCTGGATATGTTCAATTGTGATGGTACAGACATGCTTTGCTATTCCATTTGAGCAATGGACAGTTCAAGTAGTTAACAACATGAAAAGTGGTCAACCTCTGTTTCTTCATTGCAAGTCGAAAGATGACGATTTGGGAGTTCATAAGCTACGAGCTGGACAACAGTTTTCATGGAAATTTAGAGAGAATATTGTGCAATCCACATTGTTTTGGTGTTACATGCGTAGCAATCATGGCCATATTGCTGGGGAAGTATTTTGGACAAATAGTATTTACGCATGGCTTTCTTATAGATGTGGTAACCAAACTTGTGTTTGGTCCGTTAGAGATGATGGACTCTATTTGAAAGATGCTACTCAAAATAAATTTCAAGCGATGAGGCTATGGACGCCAGGCCCCTAG

mRNA sequence

ATGGTGAAAAATAATCTCAAACATTTCATGAGATTCCTCTGGATATGTTCAATTGTGATGGTACAGACATGCTTTGCTATTCCATTTGAGCAATGGACAGTTCAAGTAGTTAACAACATGAAAAGTGGTCAACCTCTGTTTCTTCATTGCAAGTCGAAAGATGACGATTTGGGAGTTCATAAGCTACGAGCTGGACAACAGTTTTCATGGAAATTTAGAGAGAATATTGTGCAATCCACATTGTTTTGGTGTTACATGCGTAGCAATCATGGCCATATTGCTGGGGAAGTATTTTGGACAAATAGTATTTACGCATGGCTTTCTTATAGATGTGGTAACCAAACTTGTGTTTGGTCCGTTAGAGATGATGGACTCTATTTGAAAGATGCTACTCAAAATAAATTTCAAGCGATGAGGCTATGGACGCCAGGCCCCTAG

Coding sequence (CDS)

ATGGTGAAAAATAATCTCAAACATTTCATGAGATTCCTCTGGATATGTTCAATTGTGATGGTACAGACATGCTTTGCTATTCCATTTGAGCAATGGACAGTTCAAGTAGTTAACAACATGAAAAGTGGTCAACCTCTGTTTCTTCATTGCAAGTCGAAAGATGACGATTTGGGAGTTCATAAGCTACGAGCTGGACAACAGTTTTCATGGAAATTTAGAGAGAATATTGTGCAATCCACATTGTTTTGGTGTTACATGCGTAGCAATCATGGCCATATTGCTGGGGAAGTATTTTGGACAAATAGTATTTACGCATGGCTTTCTTATAGATGTGGTAACCAAACTTGTGTTTGGTCCGTTAGAGATGATGGACTCTATTTGAAAGATGCTACTCAAAATAAATTTCAAGCGATGAGGCTATGGACGCCAGGCCCCTAG

Protein sequence

MVKNNLKHFMRFLWICSIVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLWTPGP

Homology

[Close]

BLAST of Clc09G13890 vs. NCBI nr
Match: KAE8651473.1 (hypothetical protein Csa_001696 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 5.7e-47
Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 1   MVKNNLKHFMRFLW-ICSIVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGV 60
           MVK N+K  M FLW I SIVM+QTC A+PF+QW+V+VVN+MK G PL+L C+S D+DLGV
Sbjct: 1   MVK-NVKQLMGFLWVIISIVMLQTCSALPFQQWSVKVVNSMKHGGPLYLRCQSADNDLGV 60

Query: 61  HKLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCG-NQTCVW 120
           H LR GQ F WKFRENI  +T+FWCYMRS +G IA EVFWTN+ Y+W+SYRCG N+ CVW
Sbjct: 61  HNLRPGQNFFWKFRENISSTTMFWCYMRSKYGFIAREVFWTNNFYSWISYRCGRNKDCVW 120

Query: 121 SVRDDGLYLKDATQN-KFQAMRLWTPGP 146
           SVRDDG YL+D   N  F  M  W   P
Sbjct: 121 SVRDDGTYLQDDADNGVFMHMDEWNELP 147

[Close]

BLAST of Clc09G13890 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 8.0e-33
Identity = 70/147 (47.62%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 1   MVKNNLKHFMRFLWI---CSIVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDL 60
           M+  NLKH    L +     ++++QT    P E W VQV N M+ GQ L LHCKSKDDD 
Sbjct: 2   MMIMNLKHCKGLLVLVITSLLIVIQTSDGAPLEHWAVQVKNEMQ-GQSLLLHCKSKDDDF 61

Query: 61  GVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSI-YAWLSYRCGNQTC 120
           G   L+ GQ FSWKFREN+ Q+TL+WCYM ++H H++ EVFW  +    +LSYRC +  C
Sbjct: 62  GKQILKQGQSFSWKFRENLWQNTLYWCYMSNDHNHVSLEVFWPEAASKPYLSYRCRDNVC 121

Query: 121 VWSVRDDGLYLKDATQNKFQAMRLWTP 144
            WS R+DG+Y+ +  +NKF+    W P
Sbjct: 122 YWSARNDGIYIYNVPENKFELHTKWLP 147

[Close]

BLAST of Clc09G13890 vs. NCBI nr
Match: PQP91987.1 (uncharacterized protein Pyn_22176 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-29
Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 21  VQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQST 80
           ++    I F++W V VVNN+ +G+ LF HCKSKDDDLG   L  G +F+W F+E+   ST
Sbjct: 28  LENTVGIRFDRWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKEHFFGST 87

Query: 81  LFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRL 140
           L+WCYM +   H A +VFW  S ++WL YRC  + C+W  +DDG+Y+K   +N+ +    
Sbjct: 88  LYWCYMSTGQKHAALDVFWVESDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHK 147

Query: 141 W 142
           W
Sbjct: 148 W 148

[Close]

BLAST of Clc09G13890 vs. NCBI nr
Match: XP_021806080.1 (S-protein homolog 1-like [Prunus avium])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-29
Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 27  IPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYM 86
           I F++W V VVNN+ +G+ LF HCKSKDDDLG   L  G +F+W F+E+   STL+WCYM
Sbjct: 34  IRFDRWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKEDFFGSTLYWCYM 93

Query: 87  RSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLW 142
            +   H A +VFW  S ++WL YRC  + C+W  +DDG+Y+K   +N+ +    W
Sbjct: 94  STGQKHAALDVFWVESDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKW 148

[Close]

BLAST of Clc09G13890 vs. NCBI nr
Match: XP_023532937.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 137.9 bits (346), Expect = 7.0e-29
Identity = 60/129 (46.51%), Postives = 86/129 (66.67%), Query Frame = 0


Query: 17  SIVMVQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENI 76
           + VM ++CFA  F+ W ++V N+M  G+ L +HCKSKDDDLG   L+ G    W+FRENI
Sbjct: 15  AFVMSESCFAYRFDAWRIRVFNDMSHGETLRIHCKSKDDDLGRQTLKVGNNLKWEFRENI 74

Query: 77  VQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQ-NKF 136
             +TLFWC + S +GH A EVF  NS    L +RC    C+WS+RDDG+Y+++++Q N +
Sbjct: 75  WLTTLFWCNINSPYGHAALEVF--NSRDPVLYFRCHGYVCIWSIRDDGIYVRNSSQNNNY 134

Query: 137 QAMRLWTPG 145
           + +  W PG
Sbjct: 135 ELIAKWEPG 141

[Close]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.2e-27
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 31  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNH 90
           +W V VVN + +G+ LF+HCKSK+DDLG   L+   +FSW F EN++ ST FWCYM  ++
Sbjct: 40  EWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDN 99

Query: 91  GHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLWTPG 145
           GH+   VFW + I   L +RCG + C+W+ + DGLYL ++   +    R W  G
Sbjct: 100 GHMNVNVFWDDVI---LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 31  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNH 90
           +W V V N + +G+ LF+HCKSK++DLG   L+   +FSW F EN++ STLFWCYM  + 
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDD 99

Query: 91  GHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLWTPG 145
           GH+  +VFW + I   L +RC  + CVW+ ++DGLYL ++   +      W  G
Sbjct: 100 GHMNVKVFWDDVI---LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKSG 150

[Close]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 46/146 (31.51%), Postives = 67/146 (45.89%), Query Frame = 0


Query: 2   VKNNLKHFMRFLWICSIVMVQTCFAI-PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH 61
           +KN+ K F+  L I    ++ +C    PF +  V V NN+     L + C+SKDDDLG H
Sbjct: 1   MKNSSKIFV-VLSIILFYVISSCHGYNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEH 60

Query: 62  KLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQ-----T 121
            L  GQ F WKFR +  ++TLF C           +  W N++  + +YR         +
Sbjct: 61  LLLHGQAFLWKFRPSWFRTTLFTC-----------KFLWNNNVKWFDTYRSDRDQGHCYS 120

Query: 122 CVWSVRDDGLYLKDATQNKFQAMRLW 142
           C WS+  D   +      KF     W
Sbjct: 121 CNWSINADSACISGNFNKKFDRCYPW 134

[Close]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 33/82 (40.24%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 46  LFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWC-YMRSNHGHIAGEVFWTNSIY 105
           L +HCKS+DDDLG H L  G+ F WKF  N   STL++C + +        E++  N  +
Sbjct: 58  LGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDF 117

Query: 106 AWLSYRCGNQTCVWSVRDDGLY 127
               YRC N  C W    DG+Y
Sbjct: 118 ----YRCAN--CTWKAEKDGIY 133

[Close]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.6e-10
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 28  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMR 87
           PF + TV  + N+  G PL +HCKSK DDLG+H +   Q++ +KF+ N+ +STLF+C  +
Sbjct: 24  PFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQ 83

Query: 88  SNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDG 125
            +        F +  IY     +     C W ++ DG
Sbjct: 84  WD------SQFKSFDIYDAQRDQGICDDCQWEIKPDG 114

[Close]

BLAST of Clc09G13890 vs. ExPASy TrEMBL
Match: A0A314XMI1 (S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_22176 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 21  VQTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQST 80
           ++    I F++W V VVNN+ +G+ LF HCKSKDDDLG   L  G +F+W F+E+   ST
Sbjct: 28  LENTVGIRFDRWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKEHFFGST 87

Query: 81  LFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRL 140
           L+WCYM +   H A +VFW  S ++WL YRC  + C+W  +DDG+Y+K   +N+ +    
Sbjct: 88  LYWCYMSTGQKHAALDVFWVESDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHK 147

Query: 141 W 142
           W
Sbjct: 148 W 148

[Close]

BLAST of Clc09G13890 vs. ExPASy TrEMBL
Match: A0A6P5RMF3 (S-protein homolog OS=Prunus avium OX=42229 GN=LOC110750112 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 0


Query: 27  IPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYM 86
           I F++W V VVNN+ +G+ LF HCKSKDDDLG   L  G +F+W F+E+   STL+WCYM
Sbjct: 34  IRFDRWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKEDFFGSTLYWCYM 93

Query: 87  RSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLW 142
            +   H A +VFW  S ++WL YRC  + C+W  +DDG+Y+K   +N+ +    W
Sbjct: 94  STGQKHAALDVFWVESDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKW 148

[Close]

BLAST of Clc09G13890 vs. ExPASy TrEMBL
Match: A0A6J1CRU0 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.4e-29
Identity = 58/130 (44.62%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 2   VKNNLKHFMRFLWICSIVMVQTCFAI-PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVH 61
           V++  KHF+ FL + S+V+++   A    ++W + VVN + +GQ LF+HCKSKD+DLG H
Sbjct: 7   VRSTKKHFLVFLLVLSLVILEPIEAFSELKKWQIHVVNGLSNGQTLFVHCKSKDNDLGEH 66

Query: 62  KLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAG-EVFWTNSIYAWLSYRCGNQTCVWS 121
            L +G +F+W FR N+  +TLFWCY+    G  A  +VFW      WL YRC +  C+W+
Sbjct: 67  NLNSGTEFNWTFRVNLWNTTLFWCYLHKPDGKSASFDVFWVEKKSIWLFYRCYHSNCIWT 126

Query: 122 VRDDGLYLKD 130
            +DDG+YL+D
Sbjct: 127 AKDDGIYLRD 136

[Close]

BLAST of Clc09G13890 vs. ExPASy TrEMBL
Match: A0A6J5Y6Z2 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51616 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 54/134 (40.30%), Postives = 79/134 (58.96%), Query Frame = 0


Query: 12  FLWICSIVMVQTCFAIP----FEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQ 71
           F+ +  + +   C   P    +  W V VVNN+ +G+ LF HCKSKDDDLG   L  G +
Sbjct: 11  FVCVAMLALSAPCLGSPVGIRYNSWHVHVVNNLSAGKTLFAHCKSKDDDLGERNLAPGTE 70

Query: 72  FSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYL 131
           F+W F+EN + +TL+WCYM +   H A +VFW    + WL YRC  + C+W  +DDG+Y+
Sbjct: 71  FNWSFKENFLGTTLYWCYMSTGQNHAALDVFWVEGEHIWLQYRCNWKDCIWIAKDDGIYI 130

Query: 132 KDATQNKFQAMRLW 142
           K   +N+ +    W
Sbjct: 131 KIIPENRDEFSHKW 144

[Close]

BLAST of Clc09G13890 vs. ExPASy TrEMBL
Match: A0A314ZRK3 (S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_06998 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 53/120 (44.17%), Postives = 76/120 (63.33%), Query Frame = 0


Query: 22  QTCFAIPFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTL 81
           +    I F++W V VVNN+ +G+ L  HCKSKDDDLG   L  G +F+W F+E+   STL
Sbjct: 29  ENAVGIRFDRWHVHVVNNLSAGKTLCAHCKSKDDDLGERNLAPGTEFNWSFKEHFFGSTL 88

Query: 82  FWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLW 141
           +WCYM +   H A +VFW  S ++WL YRC  + C+W  +DDG+Y+K   +N+ +    W
Sbjct: 89  YWCYMSTGQKHAALDVFWVESDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKW 148

[Close]

BLAST of Clc09G13890 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-28
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 0


Query: 31  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNH 90
           +W V VVN + +G+ LF+HCKSK+DDLG   L+   +FSW F EN++ ST FWCYM  ++
Sbjct: 40  EWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDN 99

Query: 91  GHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLWTPG 145
           GH+   VFW + I   L +RCG + C+W+ + DGLYL ++   +    R W  G
Sbjct: 100 GHMNVNVFWDDVI---LFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWEVG 150

[Close]

BLAST of Clc09G13890 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-25
Identity = 49/114 (42.98%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 31  QWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNH 90
           +W V V N + +G+ LF+HCKSK++DLG   L+   +FSW F EN++ STLFWCYM  + 
Sbjct: 40  EWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDD 99

Query: 91  GHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLYLKDATQNKFQAMRLWTPG 145
           GH+  +VFW + I   L +RC  + CVW+ ++DGLYL ++   +      W  G
Sbjct: 100 GHMNVKVFWDDVI---LFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKSG 150

[Close]

BLAST of Clc09G13890 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 28  PFEQWTVQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMR 87
           PF + TV  + N+  G PL +HCKSK DDLG+H +   Q++ +KF+ N+ +STLF+C  +
Sbjct: 24  PFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQ 83

Query: 88  SNHGHIAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDG 125
            +        F +  IY     +     C W ++ DG
Sbjct: 84  WD------SQFKSFDIYDAQRDQGICDDCQWEIKPDG 114

[Close]

BLAST of Clc09G13890 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 41/132 (31.06%), Postives = 59/132 (44.70%), Query Frame = 0


Query: 3   KNNLKHFMRFLWICSIVMVQTCF--------AIPFEQWTVQVVNNMKSGQPLFLHCKSKD 62
           KN +  F     IC +++  TC+          P      ++     +   L +HCKSKD
Sbjct: 8   KNLISTFSSMFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYLLGIHCKSKD 67

Query: 63  DDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRSNHGHIAGEVFWTNSIYAWLSYRCGNQ 122
           DDLG H  + G+ + WKF  N   STL++C    + G     VF  +       YRC N 
Sbjct: 68  DDLGFHIHKEGELYGWKFHVNFQNSTLYFCGF--SQGQDNKGVFDIDRAERDF-YRCRN- 127

Query: 123 TCVWSVRDDGLY 127
            C W+ + D LY
Sbjct: 128 -CTWNAKKDSLY 134

[Close]

BLAST of Clc09G13890 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.2 bits (160), Expect = 2.4e-11
Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 34  VQVVNNMKSGQPLFLHCKSKDDDLGVHKLRAGQQFSWKFRENIVQSTLFWCYMRS--NHG 93
           V + N ++  + L +HC+SKDDDLG H L+ GQ + + F +NI Q+T F C M    N  
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFK 88

Query: 94  H----IAGEVFWTNSIYAWLSYRCGNQTCVWSVRDDGLY 127
           H    +A E  W+ ++ A         +C W  R+DG+Y
Sbjct: 89  HHLDFVAYETSWSKALEA---------SCKWIGREDGIY 118

The following BLAST results are available for this feature:

BLAST of Clc09G13890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651473.1	5.7e-47	63.51	hypothetical protein Csa_001696 [Cucumis sativus]	[more]
KAE8650840.1	8.0e-33	47.62	hypothetical protein Csa_017632 [Cucumis sativus]	[more]
PQP91987.1	3.1e-29	44.63	uncharacterized protein Pyn_22176 [Prunus yedoensis var. nudiflora]	[more]
XP_021806080.1	4.1e-29	46.96	S-protein homolog 1-like [Prunus avium]	[more]
XP_023532937.1	7.0e-29	46.51	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc09G13890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	5.2e-27	44.74	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.4e-24	42.98	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
P0DN93	1.2e-12	31.51	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
P0DN92	1.2e-10	40.24	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
O23020	2.6e-10	35.05	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Clc09G13890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314XMI1	1.5e-29	44.63	S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_22176 PE=...	[more]
A0A6P5RMF3	2.0e-29	46.96	S-protein homolog OS=Prunus avium OX=42229 GN=LOC110750112 PE=3 SV=1	[more]
A0A6J1CRU0	3.4e-29	44.62	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013603 PE=3 SV=1	[more]
A0A6J5Y6Z2	1.3e-28	40.30	S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51616 PE=3 SV=1	[more]
A0A314ZRK3	1.3e-28	44.17	S-protein homolog OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_06998 PE=...	[more]

BLAST of Clc09G13890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.7e-28	44.74	S-protein homologue 1	[more]
AT4G29035.1	1.0e-25	42.98	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.8e-11	35.05	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	2.4e-11	31.06	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.4e-11	36.36	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..141 e-value: 8.7E-27 score: 93.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 24..134
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 24..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G13890.1	Clc09G13890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process