Clc09G13450 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G13450
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	PH domain-containing protein
Location	ClcChr09: 14110650 .. 14122103 (+)
RNA-Seq Expression	Clc09G13450
Synteny	Clc09G13450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATGAATATTGAATTGACTGTGAATTGCTCATCGTTCTTCTTCTTCTTCTTCTTCTTCTTGTTTTTCTTCATCTCAAGTTTCTTCTGCTTTCTTTTTGGTTTGTAGATTAACGTAACAAGAATTTGATCGAGAGGCCAGCAAAAATGTTGGAGGATCAAGTGGCATACTTATTGCAGAGGTATCTTGGAAATTATGTACGAGGACTCAACAAGGAGGCTCTGAAGATCAGTGTATGGCAAGGTTGGATTCATTTCGATTCCTGCACTCCTTGTTTCGTCTTCTTCATTTTACTTCTGCTGTCCCCATCGCATGCGTGTTAACTTTTGAAGCTCTGCAAACTTTGTACAGATATTGAGCTTTTAGTCTTAGGTGGTTTGAGTTTAAATTCGTGCAATCAGAAAAATGTAAGTTGTATTCAGAATTGTTTTAAGGTGGCGAATGAGAGGATAGTATTGAGTTTGCTAAGAAAATAGTATGTGGGATCAAACTATGTTGTTGATGAATTAGTGAGTTACATTTCTTCAGTTTGGACCTACTGTCATTCCACTCTGGATATAACTTCCAAGGCATCGCATCCCGCTCGGGTGAGGATGACTGATGTTATGTAAATAGAAACGAGAACTGACGTGTAGAGAATAGTAGTAGGATTAAGCGCCATTATAATATTAACCATAGAAGTTATACGAGGAAGTCAAGTCCATGATTTCTGCATGTATCAGGTTATGGATTGCGGTGAGCTGGAAACTTTTATAGGTTGAGGTTTTTCATAAAATATCTGATTTTGATTACAATTGAAATAATTAGAGGGGCATTACATTATCAAGCATGTGCGCAAGCTCTATTTGTTGTAATATATGCATTTGAAGTCCTTTGGTTTTGATTGAGCTTTCTACTTGTTCATGTTATTGTCTCACAGGTGATGTTGAGCTAACAAATATGCAGCTGAAGCCAGAGGCACTCAATGCATTGAAGTTGCCAGTGAAAGTTAAAGCCGGATTTCTTGGATCAGTCAAAATTAAGGTTTGTGAAATTTCGACTAGCACAGTCCATGATCATGTTTCACATCGGGATTCCCCTACAAAATTGAATAGTTTAAATATGCTTATAGTTGTTTTAACTTTATTTATTTATTTATTTATTTATTTTTTATTTTTATTTTTTTTTTAAGGAAATGATCTCTTTCATTGATGTAATGAAATGAGATAAAATCTCATAGTACAAGAGATGATACTAATGAGAGAACTTAAGAGCGGATTAGGGAATGCACCCGGGCATCTCAACTAGGTTGACACCCCCATATCTCTCTCATCATCTCCAACCAATGCCAAACTTGAACTATGCATAGTAGAGTACAAAGAGAACCAATAGTACAACTCAAACGTAACCCCGAATACAATGGGGGAGAGAACAAAAGTACTCTAGAAATAACATTAAACAGAAAATACTAGAATTCCTCTAAAACTATGGAGCTGGAAAAATAAATGCCTCCCAATTTTGACAAAGAACTTGAATGGGGAGATCTTCGAACTCTTTTGATAAAGTGCACCAAGAAAGAGGCATTTAGTAATATCACTTCCAACTGGTTTGACCAACTTGTTTTTTTTTGTCTTGAAATACCCTTTGGTTCCTCTCAAACCAAATTTCCACTGATAATGCCTTTATTGCGTTTGTCTAAATCAACCTTGGTCCCTTTTTGAGTGAAGGATCAATCAACATTTGTTGAGTGTTTTCACAAAAATCGTTGCCAAATACCCAATCCAACTCGAAAATAGAGAATATCTTCCACCAACAATTCATGACATAGGGACACCGGAAGGAAATATGCATCATGTCCTCTCCTTCTCTTTCACAAAGGGGGAAAATAGAATGGGATAAGCCCCTGTTTGGAAAGATTATGGACCAAAACTTACTTATCAGCAAGAGAAGGGAACTTGAAGCTGAATAGGAAACTTGAAACTTTGAAATTTGAAAGGAATTAATGTATTTGAACTGCGTGGTCATTAAAGTTCAAAATGATTAGGAAAGTGCACTTCAAGCAACGTGTTAAGACTCTTCTATTGTATAAAAAGAGTTGCCCTTTGACTTCTTAAATTTCCACAATTCATCTTCGGTGCAGAGTAATAAAGAGGGATTATTCAAAAGAAAAAAAAATCTGTTTATAATAGAAATGACAAACTTTTGTAGCCAATTGTGTTGATGGCTTGTGGCTGTAAGCCTGTAAGTAACTAACCATCAATATATTTGCTAAGAAAGTTTGGGAAAGGAGAGGACTATGAACATAAACAACACACCCATAAATATTTTGGAACATGCATAAAAAACATAAAGGCACGAGCAACTTCAAATAAATGTCTATATTTTTGTTCAGCAATACCATTCTGTTGAGGAGTATCACAACATGTAGCTTGATGAACAATACACTTATCTTGTAAAAAAGTAGTTAATTGTTCGTTAAAAAATTCAATTCCATTATCAGTGTGAAGAATGTGAATTTAGTTTGAAATTGAGTCTCAATCATTTTATAAAACGAACAAAAACCTCTTTTACTTCCGACTTTTTAGTTAACAAAGAAAGTCAAATGTAGTCTTCGCATTGGAAAACAAAACAATCAATTCCTTTAAATAAATTTGGAAACAAATATTTCAAGTAAATGAAAAAACTGGGATGCCCTAATCTATGATGTCGAAGCATTATAGTTTCTTGAACAGAAAGATAACTGACACTACTCAAAGTAATAGAGACCTGTCAATCATCCTAGAACGTCCAATCATCTCCCCCGAGTCTTGATCCTGAAAGAGGTAATGAGTTTCCCAAAAGATAACACTACAGTTAGCATCCTTAGATATTTTATTCACAGATAACAAATTACAAGTTAATTGTGGAACATGAAAGACAAAACGTAATGTGAGTTTTGTACTTAGAGGGATAGTTCCTTTGCTTGCAATAGATGTGAAACTACCACCGACAATACGGACTTTCTCTTTGCAATACACAAGGGAGTATGATTCAAATAAACAAGAGAAACTAGTCATATGAGTAGTAGCTCCGGAATCGATGATCCATGGAGAAAAATCTAGACACGAGAGAGAATTTAGACACGAGAAAGCTTGAGCGGAATTACCTGTATGTTCCAAAGAACCACTAGGATTACTAGATGAATTGGACTTTAGCAGCGTCGGGATTTGATCAATTTGCTCTTTACATGGACTGGAATCAACAATATTCGCATTAGAGGCTTGCTGGTGGGAATTTCTCTCAAATTGTTTAGAGCTCTTCCAATTTGCGAGTTTTTCATGAAGTTTCCAACAAGTTTCCCGCGTATGTCGGGGTTTATTGCAGTGACCGCACCAGACACGAGGCTTGTCATGAGTTTTGTTGGGTTGATCAAAAGCTTTCATTGCAGTATTTTCAATCACCAACGCTGAACTTTCAACTGAATCAATTGCCTTTTTTCCAATCATAACATTTCTGCGGCTTTCTTCATTGCAAATTTCAGAGAAAACATCATTAATAGTTGGAAGATTATTTTCCCCAAGTATCCTGCCTTTTACCTCATCAAACTCAACATTGAGACCGACAAGAAATTTGTAAATGCGACCATCTTCTACAGTTTTCCAATAATGTTTTTGGTCATTTGTGGACTTTCACTCATATGTATCAAATAGATCAAGATTTTATCAAGTCCTCTTCAGAGAGTGAAAATATTATGCAACTGAGTTACCTCCTTCTCGTATATTACCCAGTTTAAGATTCAACTCAAACACTTGTTACCCCAAATTGGAATACATTTTAGTCACTATCCCATAATTCCTTTACAGTAGAGTAGCACATGTAGTCACTGCTGATGTCTTCCACCATAGAACTGACAAGCCAAGTTATAACCATGGAGTTTACAGCGTCCCACCCAGCAAATGAAGGGTCACCTGGACTGGGAGCGGTGAGGATTCTGAAGCTGCAAGCTTGGGAAGTCAGGTATAAAGTGAAGTTGGAGGAAATGCAGGGTGTGGAGTTCAAGTGGCTTTGAAAGGCTCTTTATTCCCAAGCCTTCATTACTTTCATTTTCTGGAGTTCCCTGATATTTGTCTCTGTTGTTACTTTTGCCACCTGCATATTGTTGGGCGGTCAGCTTACTGCAGGCAGTGTTCTTTCGGCAACCTCTTGTTGGAATTCAGCTTAAGGAAGAGGAAATACCAGAATTTTAGCAGTTGTGTGCTTTGGAAGGTAAAAGACTATCTCAACTTCTAGATGATGGCTCTGGTCCCTGGATTCCTCAGATACGTACACTGTTAAATCATTAACAAAATTTTTGAATGCCTCATCCCCACTGGAAAAGGACCTTTTCCAAGCTGTATGGAAACCCAAAACCCCAAAAGAATAAATATTTTGGCAAGGCCGTTATTTATCTCCAACAATCTGCCCTGTTTAGCAAGCAGTGAAGACCTACAGCATTTGTTTTTTGCTTGTCCTTTTTCTAGCAAGTGTTGATGGAAGCTGTTTTCATACTTCAATGTGTTGTGGGTCTTTGGACACTCATTCTGTGATAATGTCTCCCAATTATTGAGAGGTCCCTCACTCTCATCTAAATCCCAAATACTATGGTCTAGGATATGATGATGGCGCTATGGTTGTGTCAACCTAGTTGAGATGACCCGGTATGCCTACTGATCCTTATTTATGTTTTCTTTGATCTCTTTGTATGTCTCTCTATAATATGAGCACTAGCCTCCTTTCATTATATCAATGAAAAGTTTATTTCCATTTCAAAAAAAAAAAAAGAAAACAAATTAAAAAAAGAAAGAAATGTAGAGCAAGACCACTGTTTGATGGTTCAGTGATTGTTCCTTCTTCTTTTTGCTGAGAGGTATCTGTGAAAGAAGTTAGTATTATCATCTCCCAATTTCAACCCATTCAACTTACTTTTTTGTATCAAATCCCTCTCCTCCAAAAGGTACAAAGTAAGGAGATCCCCTTTGATGGCCAATCTAATATACAACTCAGCTGCTGATAGATCTTCCAATTCATCCTTAGAGTAAAAAAAATTCCAGCTCCCATAATAATCTCTTCTCCTTTCTCTTCTTTTCTGCTTCATATTCTGAAAGCAACATTTCACATTTTCTTTCACCTTCCTCAGCTTCAAATTTATGATAAAACCAGCCCAACCATTTGATTGATCATCATTTAAAGTCTGTTTGATAAGCTTTGAACATTCCTCAATTAGCATTCAGCTGTTGCAAAACCGAAAAGGAGAAGGCCCCACTTAATGGCTCCAGCTTCTAATAACAAAGGCACTTTGGAAAATCAAAAGTCCTCGGTGTGTTAACATCCTTGTGTGGATCATGATCTTTGGCTACTTAAATTGCTCCTCAGTAATAAAAAGGAAGTTGCCCTCTCGCTGTTTGTCTCCTTCTATGTGCTACTTATGTAAACAGGATGGAGAAGATTTGCAACATCTCTTCTTTGCTTGCCCGTACTCAGCCTGATGCTGGTGGAGACTATTCCCCTCTCTTGACCATGTGAATCTTCGTCTTCCATTTGACAAAGGTTCAATAAATTTGTTGAATTTTTTCATTCCTCTTGTTACTCTTCCAATGGGAAATCGTTCATGGATCCATCTTGTAATATTAAAATCTTCCCCCAAACACCATGCTTCCACACAATAATGAGATAATGAGATCAACTCTGGCCAAAGTAATCTTCTTTCTCTATAATCTGTTGCTCCATAAGCATTTGTCACCCAACAAATATCTTGCAATGAGTTATGATTTTGACAGAGAGTGAGTAGCCACCTTTGGGGAATTCCAAAGGTGTGACTTTGCTCTCATCCCACATGATGAGTAATCCTCCTGACTTGCCATAAGCTTCCACAAAAGACCATCCAATATTATTTAGACTCCATATTGATTTAATTATCTGATAATCAATATCCGGCATTTTTGTTTCTTGAATCATCCCTAGATCTGGATGTTGCTGCTGCAATAAATTTTTCAATGCTGTCTTTTCAGATTTATCGTTACACCCCTTGTGGTCCATGATTTTAAATGTAGGTGGGAGAGTTTCATAGCTCCCTTTTAATTGATCTCTCCTTTGTACTTTGTCTATTTATGCTTTTTTTTCTTTCTTTTCTTCTTTCTTTCTTTCTTTTTTTTTTTATTGGAAAATGAAACAAAACTTTTCATTGATGTAATGATAATAGAGGCAAATGCTCAAAAGTACAAAGAAACAATAATGAAAAAGATAAAAACAAAAAGAGCAATATGGCATCTAACAGAATGATGCAAAGATAAAGACAAAGTTCAACAAGGATAAATAAAAGCTCCCCAATTTTATGCTCTTTTTTATATTGATGGTTCTTTTTGCTTTCTTTTGTATCTTGTATTTTGGAGCATTAGTCTTTTTTTATTTTCTTAATGAAAAGTGTGGTATCCTTTTCCACAGAAAGATCTTCTTGAGCTTGGAATTCAGTTTCTTGACTGAATTGAACCTTGTAGTGGTCTGAGTGAGTTCTTTTGTCTGCTTTTGAGCTGGTGGAATAGATTCAGTTAGCGTGTCAATGGGACATATGTCTATTTTCTTTTGATGTGTAAGATACCTATTTATTGGCTCTCAACTTGTGCTAAGGTATTTTTGGTGCTTAGGCAGTAAATTTATGGGTATGTTGACCTACTGTCTTCACTTCTTGCTGTTTTGCTACCTTTTATAAAGCAGTTCAAAACTTTCTGGCTGAATCTGCTCCCTCAAAAATCTGCACATGTGCAGCAGCCATGGATGGTTGTTGGCTTTCCAATCCATGGCTAGGTTAGGGTGCGAGACTGCTTCAGTTTATCATAGTGTTTCATTTGCAGTCATCCTTCTTTTTAATCCTTCTTGAGTTAGGATGCACCATTGAATATTGAGATCAACATCTTGTAACCAAGGATTAAAATGTTGTTGATGAAAATGTGAAGGTCTCAAATTTGCCGAAATATTCATATTGATGGATTATTCTAGGAAGGATTTTTTATTTGTTATTATGAAATTGAGCTTTACGGCTACTTGAAAGAGTACTTGTCATTTTGTTTCAACTTCGACTTCAGAGTTTTAGAGTATCAAGGTTTTTATGTCATTAATACATTTTCCAAATCAGGTTCCATGGAGCAGACTTGGTCAAGATCCTGTCATAGTGTATTTAGATCGAATTTTCTTATTAGCTGAGCCTGCTATGGAGGTTGAAGGACATAGTGAAGATGGTATCCAAGAGGTCAAGAAAACTAGAGTTCGTGTAAGTTTTATTTATTTATTTATTTTTTGGGGGTGGAGGGGGGATGAAGAAATCATATCACCATATAGACGTCTAATTTCTTCACTCTTGACATGGAGCAGGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAACGGTACGTCTACTGTAAGCACTATGGGTCATTCGCTTCCCTTATATGGTGGTTGCAAGTTTTTACATCAGTGATGTATATTTCATTAGATTAATGAAAAATCGTTTCCCTTTACAAAAAAAAAAAAAATACATCAGTGATGTATAGGGGATGCAAGTTTTTTCTTATGTAATCTTAATCAAGTTTTCTTCACTAATGGCAGATGAGTTCAGTGCTCTCATTTGCATTGGCTAAACATTTAAGGCCAAACTTGTAGAATTTTAAACAATCAAAGACAAGACTACCACTACTTTAGAAGAAACTAACTAGAGAAAATAAAAGCATCCCAATTTAAATATATATCTTGAATAGAAAAGGCTACATTACAAAAATGCCCATTTGTGTAAAAAAATATCCTTGAATTTTCAAAAGTTTCAAAAATACCCTTAAACTTTCAGAAAGAGTTCAAAAATACTCTTGCTGTCAGTTTTGGATGGAAACTGTTAGTGTTTTGTTTCAAAATTACCCCTGAACTTTTAAAAAATATAAAAAATCCCCTTAAACTTAAAAGTTAAGGGATAACTTTTTTTTTTTTTTTTTTTAAAAGGAAACAAGACTCTTCATTGAATTAATGAAATGAGACTAATACTCAAAGTACGATGATACATACAAAGAATACTAGAACTATAGTATCAGCGAATGCGTCGGATACCTCAACAAAGTTGACACGCCTTTAGCACTCCCAACATCTCTTAGTATAGAAAAAATAATAATAACTAATAATAATAACTAGCTGAAAATACAGATCCAATCAAACCCAAAAGCTCCCCTAATACAATGAGGAAAAACTGGAACATGGAACAACATTGCAAAATAAGCTCCAATATAAAGAAATATAAAGAGAACAGTACAAAAAAACTACCTTAAAAGATAGTATAGTGATCAATTCGTTTGATGTTCGAAAAGAACCAAATTTGAAACATATTATTTAGATATCTACAAATTTTTACATAGATACCCTCGTTTTCCTCTTATTTGTCCAATTCTTACACTAGTTTTCTTAGCAACCACAATAAAACTGAAACTTTAAGTTAAAGAAAAAATCTCCCAAATACAAGATTGTTAAAACGCATGCAAAGTCACGTCCAAATCTTCCAAGATATTGGTTTCTAGTCATTTATTCTACATCTCTAGCTTTCTCAACTCTGGGTCTTAACACTAAAAGAGATAGTGGTTAACTTAAATAGCCTTTTTTGTGTGTGTGTGTGTGGAGAAACCATGGAAAGAAAATTGAAAGAGTATAAACACACAAAGCCACAAAAGGAAGCCCACAAAGCGTACAAATATGATGAGTATTTTTTCATTGGGATGAAGACATAATTGAAAAATACTAGACTTCTCCACTTCTGAAAGATTTTGCCTGGTGCTCTCTCTCCAAATCCTTTGAAGACTTCTCCACTTCTTGTCTGAATTTGGAGTGCTTTTTTTCCAGCATAATGTAACTTCTTTTTAGAGCTAGGTTGGCACTTGTGCACTGTTCCTTTATCTTTTGATTTGTATTTGCTCTTTTGACCATTTGCTCTTTTTGGATTATTTTGACAGCTAAATAGTTTGCTGGGACATGATGAGGGTGCTAGGGGGTGTCAACCTAGTTGAGATTCCCGGGTGCATCTTTTGATCCTTATGTTCTTCTTGTTTATTGTATCTCTATGATGTACTTTGAGCATTAGTTTCATTAATTCAATGAACCAGACTTGTTTCTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGACATAATTGAAAACTTGTATTCTGAGGATAAAGAACAGAATCTTTTGAACGTATTTCACAGTTTCTGTCACCATACCGTTTATATATTATTAGAAAAAAAATACTAGACTGATCTATAGTGAGTAGAAATATCCTGACTGCATGTATGATCTGTTTAATGAAGAACAAAAACTTGTAGTGACAATAAGAAAATATGAAAAGTAACTTGATGAGATATAAACAAGAAAAACTCAAAATATGGTTCAACATCAATCATAACAATGGTTATCTTCGAACTTCAAATATCTTCAAAATATGGGTTGTCATTATTTAGCTGATGAAGATTAAAGAACATGCATTTGATTATTTCACTTATAATTGTGCGAAAAAAATATGTATGCTTGGTGTCTGATTGAACTTAGCTTCTAGGATGAAATGTGCTCGAGCTTGATGAGGTGATTGATTTATGGTTTCTTTTTATATGCCTGATAGCTAGCGTAACTCTATGTGAAAAGTTACTTATTTACATACTGATATTTTTGGGGCCTCACTTCAGAATTCCTATTTTCCTTCCTCTTAATTGATTATTTTTAGTGCAATCATATGTAAAATATTTTTCTTTGGAATGACTTTAATGCCATTTCTTCTGGGTTTTCTTTTTCTCAAGAATAATTCGTGGTTGGGATCACTGATCAGCACAATAATTGGAAATTTAAAGCTTTCGATATCAAATATTCACATCAGATATGAGGATATTGAAAGGTAAAAATAAATGTCTCTACTTCATGTGCTTGATTGGTTTGTTTAATAGCATAAGTTTCTATCTGCAGCAATCCTGGACATCCATTTGCAGCGGGTGTAAGTTTAGAAAAACTTTCAGCTGTTACAGTAGATGATGATGGGAAGGAGACTTTTATAACTGGTGGTGCACTTGATCGAATACTGAAGGTTTGCTTCTTAAACATTTCATTTCTTTAATGTCCTCGTCCCCTTCCCCCCTCTGACATGAAATGAGATCTGTGTTACTATTGGAAAAGATCCAATTACGTGCAGGCTTTTGAACAAACATTAATAATGCACAGTAAGGCTGTACCGTTCAACTTGCAAACCTTTAATCGTCATTAACTGTTTATTTCTACTTTTATTTTTATTTGTCTGTAGGAAAACAAACTTTTAATTGATAAGTGTGAAGTTACATTATAGTTTTCTTTTTATTTTTCCCCCTTTATATAAAATAAGAAATGAAAGATGATAATATACAAAATGTCCAGAATCTACCTCCCAAAAGGTGATAAGAACAAAAGTTAATGAGCATTTACGAGCCCTTCTCATTAGTAATAATCACTCATCCTTGGAAACCCACAAGTCTTGGCCAGATTCACGTGCAAAAGAAGGGAAAGCGTTTATTTCCCTTGATTTTTAGTCCCCTAAAAAGGTCAATGGAACTCTGTCAATATACGAAAAAAATTTGCCCATTCCTGCCTATCCTAAACAATACTCTTGTAAGAGTTTTGTAAGCCATTTCAAGAAGATGGAGTTAACTTGGATGTTTTAGAAGAAAGATGCATTTTGGTGCAAGTACCATCTTTGGCATCTAAATAGGCAAGAACAACTTGAACTTAAATGCCAATTAAAATCGACTAAAGGTAGGTATCTATCCTCTCTCCTCTCTCCTCTCTCAGCCTTCTCCGTTTGTCCCTGTCGATCAAGCCTCTCCCTGGATTGGATTTTCCCCGACTTCAAGCCTCTTCTTTAATCATCCTTCACTCATGGAATTTGTTAGCTGTAAGGTGAATGGCGGATTCTTCTGCACTTGGTTTGAATTCGGAAAGTTCGTAGTCGAAGATATGGAAGAAAAAAAAATTCTACTCCTATCGATTCGCATATGCTATGGTTGGTGAACCAGGTCACAGAACTGCTCAGCGGGTCTAGCACTCGTTTTTTCTTAAGGGATATGATAGATGCATCTGGAGAAATGAGATTATCAAAGTTCAAAAAAGATATGGGTTGGAACTTAAGATGCGTAGTTTGGCCAGCTTCGGGAGGACGTTTCTTCATTCATATTCTTGAGGGGCCTATGCAACAAGGGTGGGCAGAATTTCTGGGAATGCTTAATAATTTCATTAAAAGAAGTGGGAGATCAAAAATGAAGCCTGCAAAGAAGCCTGAAAGGAGTATGAAGCCTCAGGGGGTTGTCTCCACCTGTGATAGGCAGCGGCTGAGCTATGCAGAGATGTTAATGAAACTATGGAAGGAGCAAATCAGTCCCCTGTTATGGCTACACTAA

mRNA sequence

ATGAGAATGAATATTGAATTGACTATTAACAGGTATCTTGGAAATTATGTACGAGGACTCAACAAGGAGGCTCTGAAGATCAGTGTATGGCAAGGTGATGTTGAGCTAACAAATATGCAGCTGAAGCCAGAGGCACTCAATGCATTGAAGTTGCCAGTGAAAGTTAAAGCCGGATTTCTTGGATCAGTCAAAATTAAGGTTCCATGGAGCAGACTTGGTCAAGATCCTGTCATAGTGTATTTAGATCGAATTTTCTTATTAGCTGAGCCTGCTATGGAGGTTGAAGGACATAGTGAAGATGGTATCCAAGAGGTCAAGAAAACTAGAGTTCGTGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAACGAATAATTCGTGGTTGGGATCACTGATCAGCACAATAATTGGAAATTTAAAGCTTTCGATATCAAATATTCACATCAGATATGAGGATATTGAAAGCAATCCTGGACATCCATTTGCAGCGGGTGTAAGTTTAGAAAAACTTTCAGCTGTTACAGTAGATGATGATGGGAAGGAGACTTTTATAACTGGTGGTGCACTTGATCGAATACTGAAGCCTTCTCCGTTTGTCCCTGTCGATCAAGCCTCTCCCTGGATTGGATTTTCCCCGACTTCAAGCCTCTTCTTTAATCATCCTTCACTCATGGAATTTGTTAGCTGTAAGGTCACAGAACTGCTCAGCGGGTCTAGCACTCGTTTTTTCTTAAGGGATATGATAGATGCATCTGGAGAAATGAGATTATCAAAGTTCAAAAAAGATATGGGTTGGAACTTAAGATGCGTAGTTTGGCCAGCTTCGGGAGGACGTTTCTTCATTCATATTCTTGAGGGGCCTATGCAACAAGGGTGGGCAGAATTTCTGGGAATGCTTAATAATTTCATTAAAAGAAGTGGGAGATCAAAAATGAAGCCTGCAAAGAAGCCTGAAAGGAGTATGAAGCCTCAGGGGGTTGTCTCCACCTGTGATAGGCAGCGGCTGAGCTATGCAGAGATGTTAATGAAACTATGGAAGGAGCAAATCAGTCCCCTGTTATGGCTACACTAA

Coding sequence (CDS)

ATGAGAATGAATATTGAATTGACTATTAACAGGTATCTTGGAAATTATGTACGAGGACTCAACAAGGAGGCTCTGAAGATCAGTGTATGGCAAGGTGATGTTGAGCTAACAAATATGCAGCTGAAGCCAGAGGCACTCAATGCATTGAAGTTGCCAGTGAAAGTTAAAGCCGGATTTCTTGGATCAGTCAAAATTAAGGTTCCATGGAGCAGACTTGGTCAAGATCCTGTCATAGTGTATTTAGATCGAATTTTCTTATTAGCTGAGCCTGCTATGGAGGTTGAAGGACATAGTGAAGATGGTATCCAAGAGGTCAAGAAAACTAGAGTTCGTGAAATGGAAATCAAACTATTGGAGAGGATGCAGCGAACAAAGACAGAAACGAATAATTCGTGGTTGGGATCACTGATCAGCACAATAATTGGAAATTTAAAGCTTTCGATATCAAATATTCACATCAGATATGAGGATATTGAAAGCAATCCTGGACATCCATTTGCAGCGGGTGTAAGTTTAGAAAAACTTTCAGCTGTTACAGTAGATGATGATGGGAAGGAGACTTTTATAACTGGTGGTGCACTTGATCGAATACTGAAGCCTTCTCCGTTTGTCCCTGTCGATCAAGCCTCTCCCTGGATTGGATTTTCCCCGACTTCAAGCCTCTTCTTTAATCATCCTTCACTCATGGAATTTGTTAGCTGTAAGGTCACAGAACTGCTCAGCGGGTCTAGCACTCGTTTTTTCTTAAGGGATATGATAGATGCATCTGGAGAAATGAGATTATCAAAGTTCAAAAAAGATATGGGTTGGAACTTAAGATGCGTAGTTTGGCCAGCTTCGGGAGGACGTTTCTTCATTCATATTCTTGAGGGGCCTATGCAACAAGGGTGGGCAGAATTTCTGGGAATGCTTAATAATTTCATTAAAAGAAGTGGGAGATCAAAAATGAAGCCTGCAAAGAAGCCTGAAAGGAGTATGAAGCCTCAGGGGGTTGTCTCCACCTGTGATAGGCAGCGGCTGAGCTATGCAGAGATGTTAATGAAACTATGGAAGGAGCAAATCAGTCCCCTGTTATGGCTACACTAA

Protein sequence

MRMNIELTINRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVPWSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTETNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETFITGGALDRILKPSPFVPVDQASPWIGFSPTSSLFFNHPSLMEFVSCKVTELLSGSSTRFFLRDMIDASGEMRLSKFKKDMGWNLRCVVWPASGGRFFIHILEGPMQQGWAEFLGMLNNFIKRSGRSKMKPAKKPERSMKPQGVVSTCDRQRLSYAEMLMKLWKEQISPLLWLH

Homology

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BLAST of Clc09G13450 vs. NCBI nr
Match: XP_011652678.1 (uncharacterized protein LOC101212417 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 2.7e-98
Identity = 195/227 (85.90%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSEDGIQEVKKTRVREME+KLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P   L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEDL---HPS 230

[Close]

BLAST of Clc09G13450 vs. NCBI nr
Match: KAE8651464.1 (hypothetical protein Csa_002584 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 2.7e-98
Identity = 195/227 (85.90%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSEDGIQEVKKTRVREME+KLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P   L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEDL---HPS 230

[Close]

BLAST of Clc09G13450 vs. NCBI nr
Match: XP_038888106.1 (uncharacterized protein LOC120078006 isoform X2 [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-97
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILK 200
           ITGGALDRI K
Sbjct: 190 ITGGALDRIQK 200

[Close]

BLAST of Clc09G13450 vs. NCBI nr
Match: XP_038888105.1 (uncharacterized protein LOC120078006 isoform X1 [Benincasa hispida])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-97
Identity = 186/191 (97.38%), Postives = 187/191 (97.91%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILK 200
           ITGGALDRI K
Sbjct: 190 ITGGALDRIQK 200

[Close]

BLAST of Clc09G13450 vs. NCBI nr
Match: XP_008465914.1 (PREDICTED: uncharacterized protein LOC103503494 isoform X1 [Cucumis melo])

HSP 1 Score: 366.7 bits (940), Expect = 2.3e-97
Identity = 194/227 (85.46%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSED IQEVKKTR+REMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P  +L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEAL---HPS 230

[Close]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot
Match: Q5H8C4 (Vacuolar protein sorting-associated protein 13A OS=Mus musculus OX=10090 GN=Vps13a PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-27
Identity = 67/181 (37.02%), Postives = 110/181 (60.77%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           +NR+LG+YV  L++  L + +W+G V L N+ +K  AL+ L +P KVK G +GS+K+K+P
Sbjct: 11  LNRFLGDYVVNLDESQLSLGIWKGAVALKNLVIKENALHELDVPFKVKVGHIGSLKLKIP 70

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKK-TRVREMEIKLLER------- 128
           W  L   PV   L+ IFLL  P+  ++    D I+E K+    ++ E+K +E+       
Sbjct: 71  WKNLYTQPVEAVLEEIFLLIVPSSRIQ---YDPIKEEKQLMETKQQELKRIEKAKQKVFD 130

Query: 129 MQRTKTETNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTV 182
            ++ + E  +++   L++ II NL++ IS+IHIRYED  +N   P + G+SL+ +S  T 
Sbjct: 131 KEKPREEKQDTFTEKLVTQIIQNLQVQISSIHIRYEDDITNGDKPLSFGISLQNISLQTT 188

[Close]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot
Match: Q07878 (Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS13 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.8e-27
Identity = 65/195 (33.33%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           +NR LG+YV   +   L + +W GDV+L N++L+ + L++L LP+ VK+G LG + + VP
Sbjct: 10  LNRLLGSYVENFDPNQLNVGIWSGDVKLKNLKLRKDCLDSLNLPIDVKSGILGDLVLTVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREM-------EIKLLERM 128
           WS L   PV + ++  +LL  P  E   + E+ I+   + ++R++       + ++L   
Sbjct: 70  WSSLKNKPVKIIIEDCYLLCSPRSEDHENDEEMIKRAFRLKMRKVSEWELTNQARILSTQ 129

Query: 129 QRTKTETNNS------WLGSLISTIIGNLKLSISNIHIRYEDIES-NPGHPFAAGVSLEK 188
              KT +++S      ++ SL + II NL+++I NIH+RYED++      P + G++L +
Sbjct: 130 SENKTSSSSSEKNNAGFMQSLTTKIIDNLQVTIKNIHLRYEDMDGIFTTGPSSVGLTLNE 189

Query: 189 LSAVTVDDDGKETFI 190
           LSAV+ D +   +FI
Sbjct: 190 LSAVSTDSNWAPSFI 204

[Close]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot
Match: A1Z713 (Vacuolar protein sorting-associated protein 13 OS=Drosophila melanogaster OX=7227 GN=Vps13 PE=1 SV=2)

HSP 1 Score: 122.9 bits (307), Expect = 7.6e-27
Identity = 59/184 (32.07%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           +N+ LG+Y+  L++  LKI +W GDV L N++++  AL+ L LPV++  G+LG + +K+P
Sbjct: 11  LNKVLGDYIENLDRNQLKIGIWGGDVVLQNLKIRENALDELDLPVQLIYGYLGKLVLKIP 70

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQ---EVKKTRVREMEIKLLERMQRTK 128
           W  L   PVIV ++ +++L  P   V+ ++E   +   ++KK  +  +E    + ++  +
Sbjct: 71  WKNLYSQPVIVNIEDLYVLVSPNNNVQYNAEKEAKYEMDLKKAALDALEAARKKELEMDQ 130

Query: 129 TETNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGK 188
            + +  +   L + I+ NL++ I+N+H+RYED  +  G PF+ G+SL +L   T D D +
Sbjct: 131 PKADAGFAEKLTAQIVNNLQVQITNVHLRYED-TTTTGSPFSFGISLHELELYTTDCDWE 190

Query: 189 ETFI 190
           + ++
Sbjct: 191 KCYM 193

[Close]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot
Match: Q96RL7 (Vacuolar protein sorting-associated protein 13A OS=Homo sapiens OX=9606 GN=VPS13A PE=1 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-26
Identity = 66/179 (36.87%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           +NR+LG+YV  L+   L + +W+G V L N+Q+K  AL+ L +P KVK G +G++K+ +P
Sbjct: 11  LNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVGHIGNLKLIIP 70

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEG---HSEDGIQEVKK---TRVREMEIKLLERMQ 128
           W  L   PV   L+ I+LL  P+  ++      E  + E K+    R+ E + K++++ Q
Sbjct: 71  WKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEEAKQKVVDQEQ 130

Query: 129 RTKTETNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVD 182
               E  +++   L++ II NL++ IS+IHIRYED  +N   P + G+SL+ LS  T D
Sbjct: 131 HL-PEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRDKPLSFGISLQNLSMQTTD 188

[Close]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot
Match: Q54LB8 (Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoideum OX=44689 GN=vps13A PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.1e-25
Identity = 71/197 (36.04%), Postives = 117/197 (59.39%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNAL--KLPVKVKAGFLGSVKIK 68
           ++R LG YV+ LNK+ LKI ++ G V+L N++LK +AL  L   LP+ VK GFLG + +K
Sbjct: 11  LSRVLGEYVKNLNKDQLKIGIFGGSVQLQNLELKEDALANLPINLPITVKKGFLGKLDLK 70

Query: 69  VPWSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTK- 128
           VPW  L   PVI+ +D I+ LA P  + + +  D  +E KK    E++ K LE  +  K 
Sbjct: 71  VPWKDLKSKPVIINIDCIYALAVP--QTQNYKYDEKEEAKKQ--AELKKKKLENYEWIKS 130

Query: 129 -------------TETNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSL 188
                        +E ++S+   L++ II NL++ I+ +HIR+E+ +++ G  +A G++L
Sbjct: 131 IKDAEENEISSLQSEKSDSFTDRLVTKIIDNLQIVINKVHIRFEN-KNDIGKLYALGITL 190

Query: 189 EKLSAVTVDDDGKETFI 190
           +KLS  + D+    +F+
Sbjct: 191 DKLSIQSTDEFWIPSFV 202

[Close]

BLAST of Clc09G13450 vs. ExPASy TrEMBL
Match: A0A0A0LF94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G911780 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 1.3e-98
Identity = 195/227 (85.90%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSEDGIQEVKKTRVREME+KLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDGIQEVKKTRVREMEMKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P   L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEDL---HPS 230

[Close]

BLAST of Clc09G13450 vs. ExPASy TrEMBL
Match: A0A5D3E5L1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003970 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97
Identity = 194/227 (85.46%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSED IQEVKKTR+REMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P  +L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEAL---HPS 230

[Close]

BLAST of Clc09G13450 vs. ExPASy TrEMBL
Match: A0A1S3CPY5 (uncharacterized protein LOC103503494 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97
Identity = 194/227 (85.46%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSED IQEVKKTR+REMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P  +L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEAL---HPS 230

[Close]

BLAST of Clc09G13450 vs. ExPASy TrEMBL
Match: A0A1S3CQB7 (uncharacterized protein LOC103503494 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503494 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.1e-97
Identity = 194/227 (85.46%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSED IQEVKKTR+REMEIKLLERMQRTKTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEDVIQEVKKTRLREMEIKLLERMQRTKTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSL+STIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF
Sbjct: 130 NNSWLGSLVSTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSLFFNHPS 228
           ITGGALDRI K   FV ++Q         SPW    P  +L   HPS
Sbjct: 190 ITGGALDRIQK---FVELNQLAVYLDCDISPWYLDKPWEAL---HPS 230

[Close]

BLAST of Clc09G13450 vs. ExPASy TrEMBL
Match: A0A6J1IE12 (uncharacterized protein LOC111471811 OS=Cucurbita maxima OX=3661 GN=LOC111471811 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 3.0e-95
Identity = 188/221 (85.07%), Postives = 193/221 (87.33%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           WSRLGQDPVIVYLDRIFLLAEPA EVEGHSE+ IQEVKK RVREMEIKLLERMQR KTE 
Sbjct: 70  WSRLGQDPVIVYLDRIFLLAEPATEVEGHSEEAIQEVKKARVREMEIKLLERMQRMKTEV 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           NNSWLGSLISTIIGNLKLSISNIH+RYEDIESNPGHPFAAGVSLEKLSAVTVDDD KETF
Sbjct: 130 NNSWLGSLISTIIGNLKLSISNIHVRYEDIESNPGHPFAAGVSLEKLSAVTVDDDWKETF 189

Query: 189 ITGGALDRILKPSPFVPVDQ--------ASPWIGFSPTSSL 222
           ITGGALDRI K   FV ++Q         SPW    P   L
Sbjct: 190 ITGGALDRIRK---FVELNQLAVYLDCDISPWYMDKPWEDL 227

[Close]

BLAST of Clc09G13450 vs. TAIR 10
Match: AT4G17140.1 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 315.8 bits (808), Expect = 4.3e-86
Identity = 152/191 (79.58%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVEL NMQLKPEALNALKLPV+VKAGFLGSVK+KVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELKNMQLKPEALNALKLPVRVKAGFLGSVKLKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           W+RLGQ+PV+VYLDRIF+LAEPA +VEG SED IQE K+  +REME KL+ER +R +TE 
Sbjct: 70  WTRLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           N SW+GS+I+TI+GNLKLSISNIHIRYED+ESNPGHPF+AGV+LEKLSAVT+D+ GKETF
Sbjct: 130 NKSWMGSVINTIVGNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETF 189

Query: 189 ITGGALDRILK 200
           ITGG LD I K
Sbjct: 190 ITGGTLDSIQK 200

[Close]

BLAST of Clc09G13450 vs. TAIR 10
Match: AT4G17140.2 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 315.8 bits (808), Expect = 4.3e-86
Identity = 152/191 (79.58%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVEL NMQLKPEALNALKLPV+VKAGFLGSVK+KVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELKNMQLKPEALNALKLPVRVKAGFLGSVKLKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           W+RLGQ+PV+VYLDRIF+LAEPA +VEG SED IQE K+  +REME KL+ER +R +TE 
Sbjct: 70  WTRLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           N SW+GS+I+TI+GNLKLSISNIHIRYED+ESNPGHPF+AGV+LEKLSAVT+D+ GKETF
Sbjct: 130 NKSWMGSVINTIVGNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETF 189

Query: 189 ITGGALDRILK 200
           ITGG LD I K
Sbjct: 190 ITGGTLDSIQK 200

[Close]

BLAST of Clc09G13450 vs. TAIR 10
Match: AT4G17140.3 (pleckstrin homology (PH) domain-containing protein )

HSP 1 Score: 315.8 bits (808), Expect = 4.3e-86
Identity = 152/191 (79.58%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLGNYVRGLNKEALKISVWQGDVEL NMQLKPEALNALKLPV+VKAGFLGSVK+KVP
Sbjct: 10  LQRYLGNYVRGLNKEALKISVWQGDVELKNMQLKPEALNALKLPVRVKAGFLGSVKLKVP 69

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQEVKKTRVREMEIKLLERMQRTKTET 128
           W+RLGQ+PV+VYLDRIF+LAEPA +VEG SED IQE K+  +REME KL+ER +R +TE 
Sbjct: 70  WTRLGQEPVVVYLDRIFVLAEPATDVEGLSEDSIQEAKRNLIREMETKLVERARRLQTEM 129

Query: 129 NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDDDGKETF 188
           N SW+GS+I+TI+GNLKLSISNIHIRYED+ESNPGHPF+AGV+LEKLSAVT+D+ GKETF
Sbjct: 130 NKSWMGSVINTIVGNLKLSISNIHIRYEDLESNPGHPFSAGVTLEKLSAVTIDESGKETF 189

Query: 189 ITGGALDRILK 200
           ITGG LD I K
Sbjct: 190 ITGGTLDSIQK 200

[Close]

BLAST of Clc09G13450 vs. TAIR 10
Match: AT1G48090.1 (calcium-dependent lipid-binding family protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.7e-58
Identity = 110/197 (55.84%), Postives = 150/197 (76.14%), Query Frame = 0


Query: 9   INRYLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVP 68
           + RYLG YV GL+ EAL+ISVW+GDV L +++LK EALN+LKLPV VK+GF+G++ +KVP
Sbjct: 29  LRRYLGEYVHGLSTEALRISVWKGDVVLKDLKLKAEALNSLKLPVAVKSGFVGTITLKVP 88

Query: 69  WSRLGQDPVIVYLDRIFLLAEPAME---VEGHSEDGIQEVKKTRVREMEIKLLERMQRTK 128
           W  LG++PVIV +DR+F+LA PA +   ++    + + E K  ++ E E   LE   ++K
Sbjct: 89  WKSLGKEPVIVLIDRVFVLAYPAPDDRTLKEEDREKLLETKLQQIEEAETATLEARAKSK 148

Query: 129 TET---NNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPGHPFAAGVSLEKLSAVTVDD 188
             +    NSWLGS+I+TIIGNLK+SISN+HIRYED  SNPGHPFAAG++L KL+AVT+D+
Sbjct: 149 LGSPPQGNSWLGSIIATIIGNLKVSISNVHIRYEDSTSNPGHPFAAGITLAKLAAVTMDE 208

Query: 189 DGKETFITGGALDRILK 200
           +G ETF T GALD++ K
Sbjct: 209 EGNETFDTSGALDKLRK 225

[Close]

BLAST of Clc09G13450 vs. TAIR 10
Match: AT5G24740.1 (Protein of unknown function (DUF1162) )

HSP 1 Score: 102.4 bits (254), Expect = 7.6e-22
Identity = 53/156 (33.97%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 12  YLGNYVRGLNKEALKISVWQGDVELTNMQLKPEALNALKLPVKVKAGFLGSVKIKVPWSR 71
           YLG Y++ + K+ LKIS+W G+V L N++L PEA   L+LP+ +K G +G + IK+PW +
Sbjct: 16  YLGRYIKDIQKDQLKISLWNGEVLLENVELNPEAFEYLQLPIALKQGRVGKLSIKIPWKK 75

Query: 72  LGQDPVIVYLDRIFLLAEPAMEVEGHSEDGIQE----VKKTRVREMEIKLLERMQRTKTE 131
           L +DPV + ++ +F+ A    + E  S D +++     KK ++   E+  L R +     
Sbjct: 76  LHRDPVTIMIEDVFICASQRNDQE-WSSDVVEKREFAGKKAKLASAELAKLSR-RVFDNP 135

Query: 132 TNNSWLGSLISTIIGNLKLSISNIHIRYEDIESNPG 164
             NS++  + + I+ ++++SI N HI Y D +   G
Sbjct: 136 GGNSYMSYITAKILDSVQVSIKNFHILYSDAQPESG 169

The following BLAST results are available for this feature:

BLAST of Clc09G13450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652678.1	2.7e-98	85.90	uncharacterized protein LOC101212417 [Cucumis sativus]	[more]
KAE8651464.1	2.7e-98	85.90	hypothetical protein Csa_002584 [Cucumis sativus]	[more]
XP_038888106.1	1.4e-97	97.38	uncharacterized protein LOC120078006 isoform X2 [Benincasa hispida]	[more]
XP_038888105.1	1.4e-97	97.38	uncharacterized protein LOC120078006 isoform X1 [Benincasa hispida]	[more]
XP_008465914.1	2.3e-97	85.46	PREDICTED: uncharacterized protein LOC103503494 isoform X1 [Cucumis melo]	[more]

BLAST of Clc09G13450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5H8C4	1.2e-27	37.02	Vacuolar protein sorting-associated protein 13A OS=Mus musculus OX=10090 GN=Vps1...	[more]
Q07878	5.8e-27	33.33	Vacuolar protein sorting-associated protein 13 OS=Saccharomyces cerevisiae (stra...	[more]
A1Z713	7.6e-27	32.07	Vacuolar protein sorting-associated protein 13 OS=Drosophila melanogaster OX=722...	[more]
Q96RL7	3.8e-26	36.87	Vacuolar protein sorting-associated protein 13A OS=Homo sapiens OX=9606 GN=VPS13...	[more]
Q54LB8	7.1e-25	36.04	Putative vacuolar protein sorting-associated protein 13A OS=Dictyostelium discoi...	[more]

BLAST of Clc09G13450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF94	1.3e-98	85.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G911780 PE=4 SV=1	[more]
A0A5D3E5L1	1.1e-97	85.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CPY5	1.1e-97	85.46	uncharacterized protein LOC103503494 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CQB7	1.1e-97	85.46	uncharacterized protein LOC103503494 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IE12	3.0e-95	85.07	uncharacterized protein LOC111471811 OS=Cucurbita maxima OX=3661 GN=LOC111471811...	[more]

BLAST of Clc09G13450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17140.1	4.3e-86	79.58	pleckstrin homology (PH) domain-containing protein	[more]
AT4G17140.2	4.3e-86	79.58	pleckstrin homology (PH) domain-containing protein	[more]
AT4G17140.3	4.3e-86	79.58	pleckstrin homology (PH) domain-containing protein	[more]
AT1G48090.1	1.7e-58	55.84	calcium-dependent lipid-binding family protein	[more]
AT5G24740.1	7.6e-22	33.97	Protein of unknown function (DUF1162)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026854	Vacuolar protein sorting-associated protein 13-like, N-terminal domain	PFAM	PF12624	Chorein_N	coord: 8..101 e-value: 8.9E-30 score: 103.2
IPR031646	Vacuolar protein sorting-associated protein 13, second N-terminal domain	PFAM	PF16908	VPS13	coord: 132..191 e-value: 3.0E-20 score: 73.0
None	No IPR available	PANTHER	PTHR45523:SF2	SUBFAMILY NOT NAMED	coord: 65..199
None	No IPR available	PANTHER	PTHR45523	TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED	coord: 65..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G13450.1	Clc09G13450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane