Clc09G13440 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGGGCCTATTTTTTCTCTCAGCTCTTTCACTCCACTTTTTCCCTTTATAAAACTCCGCTCCACTCCTTCGCAATTCCAACTCTCTTCTCTTTTCTCTCTCTCATCTTCAATCTTTCTCTCTCTCTCTCTCTCTCCGGATTGAGAAGAAGGAACAACAATGGATTCTTCTGCAACTGCGAGAAGGCCATACTTCATTGACGAAGACGATGGATTGGTCTCTTTGGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACCACAACCACTATCCTCACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCACCAGAAACCTCTCGTTTTCCTCCTCCAGAATCTCACCCAGGTTTTACGACGCCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTCTCTGATAACAAAGATATTTTCATGTACAGGTTAGTTTTTCCCTTTTCTTTCTTGAAGGAGAAATTCGAGTTTTTTTTTTTTTTTTTTTTTAAAAAAAAATCTGAATTGTGGATTTTGGTTTTGATTTATGAATCGGAGAATCTGTTTGATGATTTGATTGAGAGAAACCTAATAAAATAGGGATCGGTCTTTTAATTCCTTTTCCTGTATAAATCTCGAGATCTATTTTTAATTCTGGATCGGTGGTTAAATCTGATGATATTATTATGATTATGATCTGCAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCAAAAGAGAAGAAGTTGAATCTATCATCGTCCATTAAAGCTATGAGGAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAATCCACCACCGACCACGATTGCCGTTTCCGCCCCGGCACGGTGGCGGCGGCGTAGATCAAGGAATAATCATAATATATATATATATATATATATATAAACACATATATATATATATAAAACATTCCCCGGAAAGAGGTGAAGATTTGAAGACTGAGGAAGAAGAAGAACCGGGAAGAGCAGAGAGTTCGTTTTGGTTATAATTTTTGTTTTGTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTCTTTTTTTTTTTATTTTTTTTATTTGGGGGTTTAAATTGTGGTGAGAAAATTATGCAACTGTGAATGAAGTTGTGTTAATGGTAGTGAGGAAGTCTTGTGTTCATTTTTTTTTACTGGGATTTGCTCACTTTTTTTTTTTTCTTTTTTTTGTGTGTATATTATGATATAATGAAATGACTAATGACAAACAATATGATTTGGCTTTTTACTATAA TGTGGGCCTATTTTTTCTCTCAGCTCTTTCACTCCACTTTTTCCCTTTATAAAACTCCGCTCCACTCCTTCGCAATTCCAACTCTCTTCTCTTTTCTCTCTCTCATCTTCAATCTTTCTCTCTCTCTCTCTCTCTCCGGATTGAGAAGAAGGAACAACAATGGATTCTTCTGCAACTGCGAGAAGGCCATACTTCATTGACGAAGACGATGGATTGGTCTCTTTGGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACCACAACCACTATCCTCACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCACCAGAAACCTCTCGTTTTCCTCCTCCAGAATCTCACCCAGGTTTTACGACGCCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTCTCTGATAACAAAGATATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCAAAAGAGAAGAAGTTGAATCTATCATCGTCCATTAAAGCTATGAGGAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAATCCACCACCGACCACGATTGCCGTTTCCGCCCCGGCACGGTGGCGGCGGCGTAGATCAAGGAATAATCATAATATATATATATATATATATATATAAACACATATATATATATATAAAACATTCCCCGGAAAGAGGTGAAGATTTGAAGACTGAGGAAGAAGAAGAACCGGGAAGAGCAGAGAGTTCGTTTTGGTTATAATTTTTGTTTTGTTTTTCTTTTTTTCTTTTTTTCTTTTTTTTCTTTTTTTTTTTATTTTTTTTATTTGGGGGTTTAAATTGTGGTGAGAAAATTATGCAACTGTGAATGAAGTTGTGTTAATGGTAGTGAGGAAGTCTTGTGTTCATTTTTTTTTACTGGGATTTGCTCACTTTTTTTTTTTTCTTTTTTTTGTGTGTATATTATGATATAATGAAATGACTAATGACAAACAATATGATTTGGCTTTTTACTATAA ATGGATTCTTCTGCAACTGCGAGAAGGCCATACTTCATTGACGAAGACGATGGATTGGTCTCTTTGGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACCACAACCACTATCCTCACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCACCAGAAACCTCTCGTTTTCCTCCTCCAGAATCTCACCCAGGTTTTACGACGCCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTCTCTGATAACAAAGATATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCAAAAGAGAAGAAGTTGAATCTATCATCGTCCATTAAAGCTATGAGGAAAAAAGATCAGAGAAAATCCACTTCTCCGGGAAAATCCACCACCGACCACGATTGCCGTTTCCGCCCCGGCACGGTGGCGGCGGCGTAG MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHHNHYPHSFFLRPKVICHGGALRRTTTRNLSFSSSRISPRFYDARFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA Homology
BLAST of Clc09G13440 vs. NCBI nr
Match: XP_038888234.1 (FCS-Like Zinc finger 2-like [Benincasa hispida]) HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85 Identity = 158/173 (91.33%), Postives = 162/173 (93.64%), Query Frame = 0
BLAST of Clc09G13440 vs. NCBI nr
Match: XP_011652677.2 (FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_000756 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 0
BLAST of Clc09G13440 vs. NCBI nr
Match: KAA0038523.1 (senescence-associated family protein [Cucumis melo var. makuwa] >TYK31120.1 senescence-associated family protein [Cucumis melo var. makuwa]) HSP 1 Score: 314.7 bits (805), Expect = 4.9e-82 Identity = 157/173 (90.75%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of Clc09G13440 vs. NCBI nr
Match: XP_022973263.1 (uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharacterized protein LOC111801327 [Cucurbita pepo subsp. pepo] >KAG6571751.1 FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75 Identity = 148/171 (86.55%), Postives = 153/171 (89.47%), Query Frame = 0
BLAST of Clc09G13440 vs. NCBI nr
Match: KAG7033613.1 (hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75 Identity = 148/171 (86.55%), Postives = 153/171 (89.47%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-34 Identity = 86/170 (50.59%), Postives = 114/170 (67.06%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33 Identity = 90/180 (50.00%), Postives = 120/180 (66.67%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.5e-12 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 5.2e-10 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy TrEMBL
Match: A0A5D3E683 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003980 PE=3 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82 Identity = 157/173 (90.75%), Postives = 163/173 (94.22%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy TrEMBL
Match: A0A0A0LIA5 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G911280 PE=3 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80 Identity = 158/176 (89.77%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy TrEMBL
Match: A0A6J1ICI7 (uncharacterized protein LOC111471819 OS=Cucurbita maxima OX=3661 GN=LOC111471819 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75 Identity = 148/171 (86.55%), Postives = 153/171 (89.47%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy TrEMBL
Match: A0A6J1EYH1 (uncharacterized protein LOC111439605 OS=Cucurbita moschata OX=3662 GN=LOC111439605 PE=3 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75 Identity = 148/171 (86.55%), Postives = 152/171 (88.89%), Query Frame = 0
BLAST of Clc09G13440 vs. ExPASy TrEMBL
Match: A0A6J1DNP1 (uncharacterized protein LOC111022896 OS=Momordica charantia OX=3673 GN=LOC111022896 PE=3 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 8.8e-69 Identity = 141/171 (82.46%), Postives = 145/171 (84.80%), Query Frame = 0
BLAST of Clc09G13440 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 147.9 bits (372), Expect = 7.4e-36 Identity = 86/170 (50.59%), Postives = 114/170 (67.06%), Query Frame = 0
BLAST of Clc09G13440 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 144.4 bits (363), Expect = 8.2e-35 Identity = 90/180 (50.00%), Postives = 120/180 (66.67%), Query Frame = 0
BLAST of Clc09G13440 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
BLAST of Clc09G13440 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 68.2 bits (165), Expect = 7.5e-12 Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0
BLAST of Clc09G13440 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11 Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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