Clc09G12235 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTTGCACTTAGGCCATTTTATCGAATTAAATTTTATTTGTGGTTATTTGTGTTTCTCCCTCCTCTCTATTATTCTCTCTTCTCCCTCTTCCTCCTCTTAGTTCTCATCTCTCTTTTTAATTCTATAAATAATTAATTTATGGGACACTTCCCGTGGGATTAAGAAAGCTTACGGGGCTTAAGAATTTTGATGCTTCCTTGAATCAAATTCATGGGGATTTATCAGAGTTGAGGTTTTTGACAAACCTAGTTTTTTTCTAGTTGTTTGAAAATCAAATCTCCAGCGAAATTCTAGTGGAGTTTGGTGAATTCAAGTCGCTTGTGAATCTCTCATTTTACAAGAACAAACTTACAGGGCCTCTTTTGCAATTGATTGGTTCTTTCATGGCTTTTGCTTTCATAGATGCATTGGAAAATTTCTTGGCAGTGTCGATTCCTCCTAATACCCATTCACAGCAAAACCAGAAGAATAAAAGTTGA ATGATGTTGTTTGAAAATCAAATCTCCAGCGAAATTCTAGTGGAGTTTGGTGAATTCAAGTCGCTTGTGAATCTCTCATTTTACAAGAACAAACTTACAGGGCCTCTTTTGCAATTGATTGGTTCTTTCATGGCTTTTGCTTTCATAGATGCATTGGAAAATTTCTTGGCAGTGTCGATTCCTCCTAATACCCATTCACAGCAAAACCAGAAGAATAAAAGTTGA ATGATGTTGTTTGAAAATCAAATCTCCAGCGAAATTCTAGTGGAGTTTGGTGAATTCAAGTCGCTTGTGAATCTCTCATTTTACAAGAACAAACTTACAGGGCCTCTTTTGCAATTGATTGGTTCTTTCATGGCTTTTGCTTTCATAGATGCATTGGAAAATTTCTTGGCAGTGTCGATTCCTCCTAATACCCATTCACAGCAAAACCAGAAGAATAAAAGTTGA MMLFENQISSEILVEFGEFKSLVNLSFYKNKLTGPLLQLIGSFMAFAFIDALENFLAVSIPPNTHSQQNQKNKS Homology
BLAST of Clc09G12235 vs. NCBI nr
Match: KAA0038638.1 (receptor-like protein kinase HAIKU2 [Cucumis melo var. makuwa]) HSP 1 Score: 87.0 bits (214), Expect = 7.2e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. NCBI nr
Match: XP_008466102.1 (PREDICTED: receptor-like protein kinase HAIKU2 [Cucumis melo] >TYK31239.1 receptor-like protein kinase HAIKU2 [Cucumis melo var. makuwa]) HSP 1 Score: 87.0 bits (214), Expect = 7.2e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. NCBI nr
Match: XP_038897449.1 (receptor-like protein kinase 7 [Benincasa hispida]) HSP 1 Score: 87.0 bits (214), Expect = 7.2e-14 Identity = 44/63 (69.84%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. NCBI nr
Match: XP_004136412.1 (receptor-like protein kinase 7 [Cucumis sativus] >KGN60296.1 hypothetical protein Csa_000768 [Cucumis sativus]) HSP 1 Score: 86.7 bits (213), Expect = 9.4e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. NCBI nr
Match: KAG7024597.1 (Receptor-like protein kinase HAIKU2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 84.3 bits (207), Expect = 4.7e-13 Identity = 42/67 (62.69%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy Swiss-Prot
Match: F4I2N7 (Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 8.3e-13 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy Swiss-Prot
Match: Q9LJM4 (Receptor-like protein kinase HAIKU2 OS=Arabidopsis thaliana OX=3702 GN=IKU2 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.5e-11 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy Swiss-Prot
Match: P93194 (Receptor-like protein kinase OS=Ipomoea nil OX=35883 GN=INRPK1 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05 Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy Swiss-Prot
Match: Q8VZG8 (MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3) HSP 1 Score: 48.9 bits (115), Expect = 2.9e-05 Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy Swiss-Prot
Match: Q9LP24 (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana OX=3702 GN=At1g35710 PE=1 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 9.2e-04 Identity = 20/62 (32.26%), Postives = 34/62 (54.84%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy TrEMBL
Match: A0A5D3E5X6 (Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005270 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy TrEMBL
Match: A0A5A7T707 (Receptor-like protein kinase HAIKU2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001710 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy TrEMBL
Match: A0A1S3CQF8 (receptor-like protein kinase HAIKU2 OS=Cucumis melo OX=3656 GN=LOC103503626 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.5e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy TrEMBL
Match: A0A0A0LJT1 (Receptor protein kinase CLAVATA1 OS=Cucumis sativus OX=3659 GN=Csa_3G893950 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.6e-14 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of Clc09G12235 vs. ExPASy TrEMBL
Match: A0A6J1IQN4 (receptor-like protein kinase HAIKU2 OS=Cucurbita maxima OX=3661 GN=LOC111477316 PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.3e-12 Identity = 40/67 (59.70%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Clc09G12235 vs. TAIR 10
Match: AT1G09970.1 (Leucine-rich receptor-like protein kinase family protein ) HSP 1 Score: 73.9 bits (180), Expect = 5.9e-14 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Clc09G12235 vs. TAIR 10
Match: AT1G09970.2 (Leucine-rich receptor-like protein kinase family protein ) HSP 1 Score: 73.9 bits (180), Expect = 5.9e-14 Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
BLAST of Clc09G12235 vs. TAIR 10
Match: AT3G19700.1 (Leucine-rich repeat protein kinase family protein ) HSP 1 Score: 68.6 bits (166), Expect = 2.5e-12 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0
BLAST of Clc09G12235 vs. TAIR 10
Match: AT4G08850.1 (Leucine-rich repeat receptor-like protein kinase family protein ) HSP 1 Score: 48.9 bits (115), Expect = 2.0e-06 Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of Clc09G12235 vs. TAIR 10
Match: AT4G08850.2 (Leucine-rich repeat receptor-like protein kinase family protein ) HSP 1 Score: 48.9 bits (115), Expect = 2.0e-06 Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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