Clc09G12165 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G12165
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NADH-ubiquinone oxidoreductase chain 1
Location	ClcChr09: 10832113 .. 10832547 (-)
RNA-Seq Expression	Clc09G12165
Synteny	Clc09G12165

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCAGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAATAGAACCTTTTTCACCAAGTAATGCAAATTTCTCCCTTTTTAGAATGGCTACATTTATGTTAGTTTTGGTCGCTCGGGTCGTTGTACCTTTTGATTATGGTATGGTATTGTCAGATCCATAACTTTTAAAAACCACAAATCAAATGGTTACCAAACGGGGCTTAAGCGTGCAATTCCTTATACAAATAATTAAGTGCATAAAATACAATAATTGGGAGAAAGAGATGACATTAGTAATTCTTATAGTGGTTCAGATTCCCTACTTCACTCCTCAAGACTACTTAGGTATTTTACTGCAAGGATTGTTTGGCCCAAGGAGTTGGAAAGTAGAAGTGGGGAAGTAA

mRNA sequence

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCAGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAATAGAACCTTTTTCACCAAGTAATGCAAATTTCTCCCTTTTTAGAATGGCTACATTTATGTTAGTTTTGGTCGCTCGGGTCGTTGTACCTTTTGATTATGTAATTCTTATAGTGGTTCAGATTCCCTACTTCACTCCTCAAGACTACTTAGGTATTTTACTGCAAGGATTGTTTGGCCCAAGGAGTTGGAAAGTAGAAGTGGGGAAGTAA

Coding sequence (CDS)

ATGGCTTTTGTGCAACGTCGAAAGGGTCCTGATGTAGTGGGATCGTTCAGATTGTTACAACCTCTAGCAGATGGTTTGAAATTGATTCTAATAGAACCTTTTTCACCAAGTAATGCAAATTTCTCCCTTTTTAGAATGGCTACATTTATGTTAGTTTTGGTCGCTCGGGTCGTTGTACCTTTTGATTATGTAATTCTTATAGTGGTTCAGATTCCCTACTTCACTCCTCAAGACTACTTAGGTATTTTACTGCAAGGATTGTTTGGCCCAAGGAGTTGGAAAGTAGAAGTGGGGAAGTAA

Protein sequence

MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMATFMLVLVARVVVPFDYVILIVVQIPYFTPQDYLGILLQGLFGPRSWKVEVGK

Homology

[Close]

BLAST of Clc09G12165 vs. NCBI nr
Match: QCD93700.1 (NADH dehydrogenase I subunit 6 [Vigna unguiculata])

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-20
Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSFRLLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 61 VVPFDY 66

[Close]

BLAST of Clc09G12165 vs. NCBI nr
Match: KAG8362761.1 (hypothetical protein BUALT_BualtUnG0039900 [Buddleja alternifolia] >KAG8363174.1 hypothetical protein BUALT_BualtMtG0005400 [Buddleja alternifolia])

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 98  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 157

Query: 61  VVPFDY 64
           VVPFDY
Sbjct: 158 VVPFDY 163

[Close]

BLAST of Clc09G12165 vs. NCBI nr
Match: KAG4914234.1 (hypothetical protein JHK87_051791 [Glycine soja] >KAG4914288.1 hypothetical protein JHK87_051845 [Glycine soja] >KAG4914310.1 hypothetical protein JHK87_051867 [Glycine soja])

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 61 VVPFDY 66

[Close]

BLAST of Clc09G12165 vs. NCBI nr
Match: KAF1856883.1 (hypothetical protein Lal_00001785 [Lupinus albus])

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 61 VVPFDY 66

[Close]

BLAST of Clc09G12165 vs. NCBI nr
Match: GER38991.1 (NADH-ubiquinone oxidoreductase chain 1 [Striga asiatica])

HSP 1 Score: 105.9 bits (263), Expect = 2.0e-19
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 91 VVPFDY 96

[Close]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot
Match: Q01300 (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-22
Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot
Match: P31839 (NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.5e-21
Identity = 56/70 (80.00%), Postives = 60/70 (85.71%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVA  
Sbjct: 37  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVAWA 96

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 97  VVPFDYGMVL 106

[Close]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot
Match: P92558 (NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE=1 SV=4)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-20
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANF LFRM   ATFML LVA  
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot
Match: Q01148 (NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.2e-20
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANF LFRM   ATFML LVA  
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFFLFRMAPVATFMLSLVAWA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot
Match: P26845 (NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 PE=3 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 2.9e-13
Identity = 41/66 (62.12%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARV 60
          MA +QRRKGP+VVG   LLQPLADGLKL++ EP  PS+AN  +F MA   TF L L A  
Sbjct: 34 MASMQRRKGPNVVGILGLLQPLADGLKLMIKEPILPSSANIFIFLMAPVLTFTLALCAWA 93

Query: 61 VVPFDY 64
          V+PFDY
Sbjct: 94 VIPFDY 99

[Close]

BLAST of Clc09G12165 vs. ExPASy TrEMBL
Match: A0A4D6LYR9 (NADH dehydrogenase I subunit 6 OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g1776 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.5e-20
Identity = 58/66 (87.88%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSFRLLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 61 VVPFDY 66

[Close]

BLAST of Clc09G12165 vs. ExPASy TrEMBL
Match: A0A6A5LB92 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00001785 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.7e-20
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 61 VVPFDY 66

[Close]

BLAST of Clc09G12165 vs. ExPASy TrEMBL
Match: A0A5A7Q257 (NADH-ubiquinone oxidoreductase chain 1 OS=Striga asiatica OX=4170 GN=STAS_15563 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.7e-20
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 31 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61 VVPFDY 64
          VVPFDY
Sbjct: 91 VVPFDY 96

[Close]

BLAST of Clc09G12165 vs. ExPASy TrEMBL
Match: A0A385G2B5 (NADH-ubiquinone oxidoreductase chain 1 OS=Ammopiptanthus mongolicus OX=126911 GN=nad1 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 9.7e-20
Identity = 57/66 (86.36%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 132 MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 191

Query: 61  VVPFDY 64
           VVPFDY
Sbjct: 192 VVPFDY 197

[Close]

BLAST of Clc09G12165 vs. ExPASy TrEMBL
Match: A0A6M8EI04 (NADH-ubiquinone oxidoreductase chain 1 OS=Clerodendrum yunnanense OX=201513 GN=nad1 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADGLKLIL EP SPS+ANFSLFRM   ATFML LVAR 
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARA 90

Query: 61  VVPFDYVILI 68
           VVPFDY I++
Sbjct: 91  VVPFDYGIVL 100

[Close]

BLAST of Clc09G12165 vs. TAIR 10
Match: AT2G07785.1 (NADH dehydrogenase family protein )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1  MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
          MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR 
Sbjct: 1  MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 60

Query: 61 VVPFDYVILI 68
          VVPFDY +++
Sbjct: 61 VVPFDYGMVL 70

[Close]

BLAST of Clc09G12165 vs. TAIR 10
Match: ATMG01120.1 (NADH dehydrogenase 1B )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR 
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. TAIR 10
Match: ATMG00516.1 (NADH dehydrogenase 1C )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR 
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. TAIR 10
Match: ATMG01275.1 (NADH dehydrogenase 1A )

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-21
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 1   MAFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRM---ATFMLVLVARV 60
           MAFVQRRKGPDVVGSF LLQPLADG KLIL EP SPS+ANF LFRM   ATFML LVAR 
Sbjct: 31  MAFVQRRKGPDVVGSFGLLQPLADGSKLILKEPISPSSANFFLFRMAPVATFMLSLVARA 90

Query: 61  VVPFDYVILI 68
           VVPFDY +++
Sbjct: 91  VVPFDYGMVL 100

[Close]

BLAST of Clc09G12165 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein )

HSP 1 Score: 40.4 bits (93), Expect = 9.7e-04
Identity = 27/77 (35.06%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 2   AFVQRRKGPDVVGSFRLLQPLADGLKLILIEPFSPSNANFSLFRMA---TFMLVLVARVV 61
           A +Q+R GP+  G   +LQ LADG KL+  E   PS  N  LF +      + +L++  V
Sbjct: 56  AGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSV 115

Query: 62  VPF-DYVILIVVQIPYF 75
           +PF ++++L  + I  F
Sbjct: 116 IPFSNHLVLADLNIGIF 132

The following BLAST results are available for this feature:

BLAST of Clc09G12165 vs. NCBI nr


Match Name	E-value	Identity	Description
QCD93700.1	3.1e-20	87.88	NADH dehydrogenase I subunit 6 [Vigna unguiculata]	[more]
KAG8362761.1	2.0e-19	86.36	hypothetical protein BUALT_BualtUnG0039900 [Buddleja alternifolia] >KAG8363174.1...	[more]
KAG4914234.1	2.0e-19	86.36	hypothetical protein JHK87_051791 [Glycine soja] >KAG4914288.1 hypothetical prot...	[more]
KAF1856883.1	2.0e-19	86.36	hypothetical protein Lal_00001785 [Lupinus albus]	[more]
GER38991.1	2.0e-19	86.36	NADH-ubiquinone oxidoreductase chain 1 [Striga asiatica]	[more]

BLAST of Clc09G12165 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q01300	7.7e-22	81.43	NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida OX=4102 GN=ND1 PE=3 SV...	[more]
P31839	6.5e-21	80.00	NADH-ubiquinone oxidoreductase chain 1 OS=Oenothera berteroana OX=3950 GN=ND1 PE...	[more]
P92558	3.2e-20	78.57	NADH-ubiquinone oxidoreductase chain 1 OS=Arabidopsis thaliana OX=3702 GN=ND1 PE...	[more]
Q01148	3.2e-20	78.57	NADH-ubiquinone oxidoreductase chain 1 OS=Triticum aestivum OX=4565 GN=ND1 PE=2 ...	[more]
P26845	2.9e-13	62.12	NADH-ubiquinone oxidoreductase chain 1 OS=Marchantia polymorpha OX=3197 GN=ND1 P...	[more]

BLAST of Clc09G12165 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D6LYR9	1.5e-20	87.88	NADH dehydrogenase I subunit 6 OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g1776 PE...	[more]
A0A6A5LB92	9.7e-20	86.36	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00001785 PE=3 SV=1	[more]
A0A5A7Q257	9.7e-20	86.36	NADH-ubiquinone oxidoreductase chain 1 OS=Striga asiatica OX=4170 GN=STAS_15563 ...	[more]
A0A385G2B5	9.7e-20	86.36	NADH-ubiquinone oxidoreductase chain 1 OS=Ammopiptanthus mongolicus OX=126911 GN...	[more]
A0A6M8EI04	1.3e-19	82.86	NADH-ubiquinone oxidoreductase chain 1 OS=Clerodendrum yunnanense OX=201513 GN=n...	[more]

BLAST of Clc09G12165 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07785.1	1.3e-21	78.57	NADH dehydrogenase family protein	[more]
ATMG01120.1	1.3e-21	78.57	NADH dehydrogenase 1B	[more]
ATMG00516.1	1.3e-21	78.57	NADH dehydrogenase 1C	[more]
ATMG01275.1	1.3e-21	78.57	NADH dehydrogenase 1A	[more]
ATCG01100.1	9.7e-04	35.06	NADH dehydrogenase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PFAM	PF00146	NADHdh	coord: 1..70 e-value: 1.5E-13 score: 50.8
IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	PANTHER	PTHR11432	NADH DEHYDROGENASE SUBUNIT 1	coord: 1..67
None	No IPR available	PANTHER	PTHR11432:SF20	NADH DEHYDROGENASE 1A	coord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G12165.1	Clc09G12165.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity