Clc09G12060 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G12060
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	TCP transcription factor
Location	ClcChr09: 10750187 .. 10751360 (-)
RNA-Seq Expression	Clc09G12060
Synteny	Clc09G12060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGGAGTGCATGGGATAATTTTATCCCAAAGGTTCCATTTATTAGGCGCAGCAAAAGGCGGGCAATGTCAGTGTCAGTCACAGGTTCTCATCTCCACTACTCTCCAGGTATGATTCTTCCCTTTCTTCTTCACAAACTTCCACATTTTATTCCTTCAATTCCACCAATGGTCCCTCCCTTTTGATTCTGATGTTTCCATCTTTTTGTGACAATCAAAAGATAAGAAAGAATCAAATTTCACAAACACCCTCTATTCAAAATTCCCTAAATTACCCATTTCATGAATCTCCGCCCATTATCCGCCGGAAAATGAAGACCAGTGCCGCCGGAGAGATTGTTCCAGTCCAAGGCGGTCACATCCTCCGCTCTACCGGCAGGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGCCGTGTGAGATTGTCGGCTCACACCGCCATCCGATTCTACGATGTGCAAGACCGACTGGGTTACGATCGGCCCAGTAAAGCCGTCGATTGGCTAATTAAAAAGGCCAAATTCGCCATTGATAAGCTTCAAGAACTTCCCCCTTATTTCCCCATTGCCAATGGTTTCACAGACCCAAATCCCAAGACAGGGGAAACAGAGTCTTCTGAATTTGGTTCCCAGTTGCACTTGCCATCCGCCGTTGAAAACTTCGCTCCGCCTCTAGAATCTTTATTTCCGATGAGTTCTGCGACCACGTCCACTAATTTTCAGGGCTATCCGGTGAATTTCATTTTGAGACCCACTGACCCGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGACTCTCCCCTAATTCCGTCGGAGGAAGATGGAAACCATTCGCCGGCGAATGACCAGCGGCTTATTTCCGATTCGATTCCGGCGGGGTACGAAGGAGACGAGGCTGGGCTGTGGCTGCAGCAGCCATTGTTAGGGCAAAATTCGGCAGCGGCGTTTTCCCAGAGGGTGTCGGTTCAGGCCAGTTTGGGGCATTCGCTGCCGATTCGTGGTTGGAGCAATCAGAATCGACAGTTGTCGGTGCTCGGCGGCCGATTTGATGGGTCATCGGAGTTGCGTACGCCGTCGCGGATTCGAGGTGAAGGTCGGGAAGATGGCGTCGTTTCCGGGACTCATTCGTCGCCGCCGAATTATCGCCGGTAG

mRNA sequence

ATGAATGGAGTGCATGGGATAATTTTATCCCAAAGGTTCCATTTATTAGGCGCAGCAAAAGGCGGGCAATGTCAGTGTCAGTCACAGGTTCTCATCTCCACTACTCTCCAGATAAGAAAGAATCAAATTTCACAAACACCCTCTATTCAAAATTCCCTAAATTACCCATTTCATGAATCTCCGCCCATTATCCGCCGGAAAATGAAGACCAGTGCCGCCGGAGAGATTGTTCCAGTCCAAGGCGGTCACATCCTCCGCTCTACCGGCAGGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGCCGTGTGAGATTGTCGGCTCACACCGCCATCCGATTCTACGATGTGCAAGACCGACTGGGTTACGATCGGCCCAGTAAAGCCGTCGATTGGCTAATTAAAAAGGCCAAATTCGCCATTGATAAGCTTCAAGAACTTCCCCCTTATTTCCCCATTGCCAATGGTTTCACAGACCCAAATCCCAAGACAGGGGAAACAGAGTCTTCTGAATTTGGTTCCCAGTTGCACTTGCCATCCGCCGTTGAAAACTTCGCTCCGCCTCTAGAATCTTTATTTCCGATGAGTTCTGCGACCACGTCCACTAATTTTCAGGGCTATCCGGTGAATTTCATTTTGAGACCCACTGACCCGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGACTCTCCCCTAATTCCGTCGGAGGAAGATGGAAACCATTCGCCGGCGAATGACCAGCGGCTTATTTCCGATTCGATTCCGGCGGGGTACGAAGGAGACGAGGCTGGGCTGTGGCTGCAGCAGCCATTGTTAGGGCAAAATTCGGCAGCGGCGTTTTCCCAGAGGGTGTCGGTTCAGGCCAGTTTGGGGCATTCGCTGCCGATTCGTGGTTGGAGCAATCAGAATCGACAGTTGTCGGTGCTCGGCGGCCGATTTGATGGGTCATCGGAGTTGCGTACGCCGTCGCGGATTCGAGGTGAAGGTCGGGAAGATGGCGTCGTTTCCGGGACTCATTCGTCGCCGCCGAATTATCGCCGGTAG

Coding sequence (CDS)

ATGAATGGAGTGCATGGGATAATTTTATCCCAAAGGTTCCATTTATTAGGCGCAGCAAAAGGCGGGCAATGTCAGTGTCAGTCACAGGTTCTCATCTCCACTACTCTCCAGATAAGAAAGAATCAAATTTCACAAACACCCTCTATTCAAAATTCCCTAAATTACCCATTTCATGAATCTCCGCCCATTATCCGCCGGAAAATGAAGACCAGTGCCGCCGGAGAGATTGTTCCAGTCCAAGGCGGTCACATCCTCCGCTCTACCGGCAGGAAAGACCGTCATAGTAAGGTCTTCACCGCCAAAGGCCCTCGCGACCGCCGTGTGAGATTGTCGGCTCACACCGCCATCCGATTCTACGATGTGCAAGACCGACTGGGTTACGATCGGCCCAGTAAAGCCGTCGATTGGCTAATTAAAAAGGCCAAATTCGCCATTGATAAGCTTCAAGAACTTCCCCCTTATTTCCCCATTGCCAATGGTTTCACAGACCCAAATCCCAAGACAGGGGAAACAGAGTCTTCTGAATTTGGTTCCCAGTTGCACTTGCCATCCGCCGTTGAAAACTTCGCTCCGCCTCTAGAATCTTTATTTCCGATGAGTTCTGCGACCACGTCCACTAATTTTCAGGGCTATCCGGTGAATTTCATTTTGAGACCCACTGACCCGGCTCGAGATCTCGCCCTCTCTCTCCATAACCTCCATGACTCTCCCCTAATTCCGTCGGAGGAAGATGGAAACCATTCGCCGGCGAATGACCAGCGGCTTATTTCCGATTCGATTCCGGCGGGGTACGAAGGAGACGAGGCTGGGCTGTGGCTGCAGCAGCCATTGTTAGGGCAAAATTCGGCAGCGGCGTTTTCCCAGAGGGTGTCGGTTCAGGCCAGTTTGGGGCATTCGCTGCCGATTCGTGGTTGGAGCAATCAGAATCGACAGTTGTCGGTGCTCGGCGGCCGATTTGATGGGTCATCGGAGTTGCGTACGCCGTCGCGGATTCGAGGTGAAGGTCGGGAAGATGGCGTCGTTTCCGGGACTCATTCGTCGCCGCCGAATTATCGCCGGTAG

Protein sequence

MNGVHGIILSQRFHLLGAAKGGQCQCQSQVLISTTLQIRKNQISQTPSIQNSLNYPFHESPPIIRRKMKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVENFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNHSPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGWSNQNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR

Homology

[Close]

BLAST of Clc09G12060 vs. NCBI nr
Match: XP_023529225.1 (transcription factor TCP10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.2 bits (1071), Expect = 1.5e-112
Identity = 214/286 (74.83%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MK+SAA EIVPVQGGHI+RST RKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVE 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIANGF DPN KTGETE+        L SAV 
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNRKTGETET----ESSELQSAVG 120

Query: 188 NFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 247
           +FAP LE  FP +SATTS NFQGYPV+ IL PT P RDLALSLHN HDS LIPSE++ N 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTGPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 248 SPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGWSN 307
           SP N QRLI DSIPAGYEG +AGLWLQQPL+GQNS AAFSQ           +P+ GWSN
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ-----------VPMHGWSN 240

Query: 308 QNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           Q RQ +  GGRF+G SE  TPSRIRGEG EDGVVSG+HSS PNY R
Sbjct: 241 QIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. NCBI nr
Match: KAG6589264.1 (Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022963.1 Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416.8 bits (1070), Expect = 1.9e-112
Identity = 214/286 (74.83%), Postives = 231/286 (80.77%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MK+SAA EIVPVQGGHI+RST RKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVE 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIANGF DPN KTGETE+   G    L SAV 
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNRKTGETETESSG----LQSAVG 120

Query: 188 NFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 247
           +FAP LE  FP +SATTS NFQGYPV+ IL PTDP RDLALSLHN HDS LIPSE++ N 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNANS 180

Query: 248 SPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGWSN 307
           SP N QRLI DSIPAGYEG +AGLWLQQPL+GQNS AAFSQ           +P+ GWS+
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ-----------VPMHGWSD 240

Query: 308 QNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           Q RQ +  GGR  G SE  TPSRIRGEG EDGVVSG+HSS PNY R
Sbjct: 241 QIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. NCBI nr
Match: XP_022989259.1 (transcription factor TCP10-like [Cucurbita maxima])

HSP 1 Score: 414.5 bits (1064), Expect = 9.4e-112
Identity = 216/288 (75.00%), Postives = 233/288 (80.90%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MKTSAA EIVPVQGGHI+RST RKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKTSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTG--ETESSEFGSQLHLPSA 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIA+GF DPN KTG  ETES+E      L SA
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIAHGFADPNRKTGERETESTE------LQSA 120

Query: 188 VENFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDG 247
           V +FAP LE  FP +SATTS NFQGYPV+ IL PTDP RDLALSLHN HDS LIPSE++ 
Sbjct: 121 VGHFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNA 180

Query: 248 NHSPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGW 307
           N SP N QRLI DSIPAGYEG +AGLWLQQPL+ QNS AAFSQ           +P+ GW
Sbjct: 181 NSSPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMEQNSTAAFSQ-----------VPMHGW 240

Query: 308 SNQNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           SNQ RQ +  GGRF+G SE  TPSRIRGEG EDGVVSG+HSS PNY R
Sbjct: 241 SNQIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. NCBI nr
Match: XP_022930891.1 (transcription factor TCP10-like [Cucurbita moschata])

HSP 1 Score: 407.1 bits (1045), Expect = 1.5e-109
Identity = 209/286 (73.08%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MK+SAA EIVPVQGGHI+RST RKDRHSKVFT+KGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTSKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVE 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIANGF DPN KTGETE+        L SAV 
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNQKTGETET----ESSELQSAVG 120

Query: 188 NFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 247
           +FAP LE  FP +SATTS NFQGYPV+ IL PTDP RDLALSLHN H+S LIPSE++ N 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHESRLIPSEQNANS 180

Query: 248 SPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGWSN 307
           SP N QRLI DSIPAGYEG +AGLWLQQPL+GQNS AAFSQ           + + GWS+
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ-----------VQMHGWSD 240

Query: 308 QNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           Q RQ +  GGR  G SE  TPSRIRGEG EDGVV G+HSS PNY R
Sbjct: 241 QIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVLGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. NCBI nr
Match: XP_038877605.1 (transcription factor TCP10-like [Benincasa hispida])

HSP 1 Score: 345.9 bits (886), Expect = 4.1e-91
Identity = 170/195 (87.18%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MKTS  GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY
Sbjct: 1   MKTSTGGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVE 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPYFPI +G TD NPKTGET+S EFG QL L SA  
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLKELPPYFPIVSGLTDSNPKTGETDSPEFGFQLQLQSATG 120

Query: 188 NFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 247
           NFAPP ESLFPMSSAT STNFQGYPVN I RPTDP RDLALSLHN HDS +IPSEEDG+H
Sbjct: 121 NFAPPPESLFPMSSATVSTNFQGYPVNLISRPTDPVRDLALSLHNFHDSRVIPSEEDGSH 180

Query: 248 SPANDQRLISDSIPA 263
           S ANDQRLI+DSIPA
Sbjct: 181 STANDQRLIADSIPA 195

[Close]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot
Match: Q8LPR5 (Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-38
Identity = 111/272 (40.81%), Postives = 137/272 (50.37%), Query Frame = 0


Query: 58  HESPPIIRRKMKTSAA-----GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSA 117
           H  PP   R   TS A     GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 118 HTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP-----IANGFTDPNPK 177
           HTAI+FYDVQDRLG+DRPSKAVDWLIKKAK +ID+L ELPP+ P     +A     P   
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRT 127

Query: 178 TGETESS---------------------EFGSQLHLPSAVENFAPP----------LESL 237
           T +T+ S                       G   H  +   +F PP          ++S 
Sbjct: 128 TAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSF 187

Query: 238 FPMSSATTST--------NF-QGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 276
           FP+  ++T          N+   +P + + R     +DL LSL +  D P        +H
Sbjct: 188 FPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHH 247

[Close]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot
Match: Q9MAH8 (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-38
Identity = 107/239 (44.77%), Postives = 139/239 (58.16%), Query Frame = 0


Query: 60  SPPIIRRKMKTSA------AGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAH 119
           SPP++  +   SA       GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA 
Sbjct: 13  SPPLLEMRHHQSATENGGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAP 72

Query: 120 TAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP----------IANG--- 179
           TAI+FYDVQDRLG+DRPSKAVDWLI KAK AID L +LPP+ P           AN    
Sbjct: 73  TAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWNPADTLRQHAAAAANAKPR 132

Query: 180 -----FTDPNPKTGETESSEFGSQ-----LHLPSAV--ENFAPPLESLFPMSSATTSTNF 239
                 + P P+  ETE    G +       LP+++  ++ A  ++S FP+  A+T  ++
Sbjct: 133 KTKTLISPPPPQPEETEHHRIGEEEDNESSFLPASMDSDSIADTIKSFFPV--ASTQQSY 192

Query: 240 QGYPVNFILRPTDPARD-LALSLHNLHDSPLIPSE-EDGNHSPANDQRLISDSIPAGYE 266
              P +   R     +D L LSL +  + P  P++ E    S  ++ +L  DS  A +E
Sbjct: 193 HHQPPS---RGNTQNQDLLRLSLQSFQNGPPFPNQTEPALFSGQSNNQLAFDSSTASWE 246

[Close]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot
Match: A2WM14 (Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-37
Identity = 113/283 (39.93%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 74  GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKA 133
           GEIV VQGGHI+RSTGRKDRHSKV TA+GPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA
Sbjct: 197 GEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 256

Query: 134 VDWLIKKAKFAIDKLQELPPYFPIANG----------FTDPNPKTGETESSE-------- 193
           VDWLIK AK AIDKL  LP + P A G           +  +P + E    +        
Sbjct: 257 VDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVAH 316

Query: 194 ---------FGSQLHLPSAVEN--FAPPLESLFPM--------SSATTST-----NFQGY 253
                     G    LP ++++   A  ++S FPM        SS+TT+       FQ Y
Sbjct: 317 TAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQSY 376

Query: 254 PVNFILRPTDPARDLALSLHNLHDSPLIPSEE------DGNHSPANDQRLISDSIPAGYE 296
             + + R    +++L LSL +L D P+   ++       G  +    Q L S +  A Y 
Sbjct: 377 TPDLLSRTGSQSQELRLSLQSLPD-PMFHHQQHRHGGGGGGGNGTTQQALFSGA--ANYS 436

[Close]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot
Match: Q8LT07 (Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-37
Identity = 113/283 (39.93%), Postives = 144/283 (50.88%), Query Frame = 0


Query: 74  GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKA 133
           GEIV VQGGHI+RSTGRKDRHSKV TA+GPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA
Sbjct: 73  GEIVAVQGGHIVRSTGRKDRHSKVCTARGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 132

Query: 134 VDWLIKKAKFAIDKLQELPPYFPIANG----------FTDPNPKTGETESSE-------- 193
           VDWLIK AK AIDKL  LP + P A G           +  +P + E    +        
Sbjct: 133 VDWLIKNAKDAIDKLDVLPAWQPTAGGAGAGNAAAPPSSSTHPDSAENSDDQAQAITVAH 192

Query: 194 ---------FGSQLHLPSAVEN--FAPPLESLFPM--------SSATTST-----NFQGY 253
                     G    LP ++++   A  ++S FPM        SS+TT+       FQ Y
Sbjct: 193 TAFDFAGGGSGGTSFLPPSLDSDAIADTIKSFFPMGGTAGGEASSSTTAAQSSAMGFQSY 252

Query: 254 PVNFILRPTDPARDLALSLHNLHDSPLIPSEE------DGNHSPANDQRLISDSIPAGYE 296
             + + R    +++L LSL +L D P+   ++       G  +    Q L S +  A Y 
Sbjct: 253 TPDLLSRTGSQSQELRLSLQSLPD-PMFHHQQHRHGGGGGGGNGTTQQALFSGA--ANYS 312

[Close]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot
Match: O82277 (Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-37
Identity = 95/177 (53.67%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 74  GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKA 133
           GEIV VQGGHI+R+TGRKDRHSKVFT+KGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA
Sbjct: 13  GEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 72

Query: 134 VDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETES------SEFGSQLHLPSAVE 193
           VDWLIKKAK AIDKL+            T   P   + ES       E   Q    +A  
Sbjct: 73  VDWLIKKAKTAIDKLE----LGETTTTTTRQEPVNTKPESPTLVFQRENNDQTQFVAANL 132

Query: 194 NFAPPLESLFPMSSAT-----TSTNFQGYP----VNFILRPTDP----ARDLALSLH 232
           +    +++ FP ++ T     T+ NFQ YP     N + R T P    ++DL LSLH
Sbjct: 133 DPEDAMKTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLH 185

[Close]

BLAST of Clc09G12060 vs. ExPASy TrEMBL
Match: A0A6J1JNV1 (transcription factor TCP10-like OS=Cucurbita maxima OX=3661 GN=LOC111486387 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 4.6e-112
Identity = 216/288 (75.00%), Postives = 233/288 (80.90%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MKTSAA EIVPVQGGHI+RST RKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKTSAAAEIVPVQGGHIIRSTARKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTG--ETESSEFGSQLHLPSA 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIA+GF DPN KTG  ETES+E      L SA
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIAHGFADPNRKTGERETESTE------LQSA 120

Query: 188 VENFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDG 247
           V +FAP LE  FP +SATTS NFQGYPV+ IL PTDP RDLALSLHN HDS LIPSE++ 
Sbjct: 121 VGHFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHDSRLIPSEQNA 180

Query: 248 NHSPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGW 307
           N SP N QRLI DSIPAGYEG +AGLWLQQPL+ QNS AAFSQ           +P+ GW
Sbjct: 181 NSSPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMEQNSTAAFSQ-----------VPMHGW 240

Query: 308 SNQNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           SNQ RQ +  GGRF+G SE  TPSRIRGEG EDGVVSG+HSS PNY R
Sbjct: 241 SNQIRQSAGHGGRFEGPSEFCTPSRIRGEGVEDGVVSGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. ExPASy TrEMBL
Match: A0A6J1ES58 (transcription factor TCP10-like OS=Cucurbita moschata OX=3662 GN=LOC111437241 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 7.3e-110
Identity = 209/286 (73.08%), Postives = 228/286 (79.72%), Query Frame = 0


Query: 68  MKTSAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGY 127
           MK+SAA EIVPVQGGHI+RST RKDRHSKVFT+KGPRDRRVRLSAHTAIRFYDVQD+LGY
Sbjct: 1   MKSSAAAEIVPVQGGHIIRSTARKDRHSKVFTSKGPRDRRVRLSAHTAIRFYDVQDQLGY 60

Query: 128 DRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETESSEFGSQLHLPSAVE 187
           DRPSKAVDWLIKKAKFAIDKL+ELPPY PIANGF DPN KTGETE+        L SAV 
Sbjct: 61  DRPSKAVDWLIKKAKFAIDKLRELPPYSPIANGFADPNQKTGETET----ESSELQSAVG 120

Query: 188 NFAPPLESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 247
           +FAP LE  FP +SATTS NFQGYPV+ IL PTDP RDLALSLHN H+S LIPSE++ N 
Sbjct: 121 HFAPSLEPFFPTTSATTSINFQGYPVDLILTPTDPPRDLALSLHNFHESRLIPSEQNANS 180

Query: 248 SPANDQRLISDSIPAGYEGDEAGLWLQQPLLGQNSAAAFSQRVSVQASLGHSLPIRGWSN 307
           SP N QRLI DSIPAGYEG +AGLWLQQPL+GQNS AAFSQ           + + GWS+
Sbjct: 181 SPGNYQRLIGDSIPAGYEGGDAGLWLQQPLMGQNSTAAFSQ-----------VQMHGWSD 240

Query: 308 QNRQLSVLGGRFDGSSELRTPSRIRGEGREDGVVSGTHSSPPNYRR 354
           Q RQ +  GGR  G SE  TPSRIRGEG EDGVV G+HSS PNY R
Sbjct: 241 QIRQSAGHGGRLQGPSEFCTPSRIRGEGVEDGVVLGSHSSSPNYHR 271

[Close]

BLAST of Clc09G12060 vs. ExPASy TrEMBL
Match: A0A1Q3C6T3 (TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19463 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.1e-61
Identity = 165/352 (46.88%), Postives = 193/352 (54.83%), Query Frame = 0


Query: 71  SAAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRP 130
           S  GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRP
Sbjct: 10  STGGEIVQVQGGHIIRSTGRKDRHSKVSTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRP 69

Query: 131 SKAVDWLIKKAKFAIDKLQELPPYFPIANGF-----TDPNPKTG--------ETESSEFG 190
           SKAVDWLI+KAK AIDKL +LPP+ PIA+G       +PN   G        ++ESS + 
Sbjct: 70  SKAVDWLIEKAKSAIDKLADLPPWHPIASGSGVPIEAEPNTAAGSSEMAIGEQSESSGYN 129

Query: 191 SQLHL-----PSAVENFAPP----------LESLFPMSSATTSTNFQGYPVNFILRPTDP 250
            QLH      PS   +F PP          ++S FP SS  +S NFQ YP + I R T P
Sbjct: 130 FQLHRQLGDDPSNDSSFIPPSLDTDPIADTMKSFFPTSSTASSINFQNYPPDMISRSTIP 189

Query: 251 ARDLALSLHNLHDSPLI--PSEEDGNHSPANDQRLISDSIPAGYE--------------- 310
            +DL LSLH   D  LI   ++ D +H+ + DQ L   S P GYE               
Sbjct: 190 TQDLGLSLHPFQDPGLIHGQAQGDSSHTNSTDQNLFVGSAPVGYEANFQRMVAWSNGTST 249

Query: 311 -----GDEAGLWL--------QQPLLGQNSAAAFSQRVSVQASLGHSLPIRGW------- 351
                G   G ++        QQ LLGQ S  AFSQR  +Q+S   S  IR W       
Sbjct: 250 ENRGGGGSVGGFIFNSLALPHQQALLGQGS--AFSQRGPLQSSFAQS--IRSWDDISIAS 309

[Close]

BLAST of Clc09G12060 vs. ExPASy TrEMBL
Match: A0A6A6K413 (TCP domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_011489 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 2.8e-61
Identity = 161/345 (46.67%), Postives = 194/345 (56.23%), Query Frame = 0


Query: 72  AAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPS 131
           A GEIV VQGGHI+RSTGRKDRHSKV+TAKGPRDRRVRLSAHTAI+FYDVQDRLGYDRPS
Sbjct: 4   AGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 63

Query: 132 KAVDWLIKKAKFAIDKLQELPPYFPIA---NGFTDPNPKTG--------ETESSEFGSQL 191
           KAVDWLIKKAK AIDKL ELPP+ P+A   NG  + +   G        ++ESS +  QL
Sbjct: 64  KAVDWLIKKAKSAIDKLAELPPWHPLANNTNGTMEADQNAGSSEMAIAEQSESSGYSFQL 123

Query: 192 HL-----PSAVENFAPP----------LESLFPMSSATTSTNFQGYPVNFILRPTDPARD 251
           H      PS   +F  P          ++SLFP SS T+S NFQGYP + I R T+   D
Sbjct: 124 HRHLADNPSNGSSFITPSIDPDAIPDTMKSLFPTSSTTSSMNFQGYPPDIISRTTNHTED 183

Query: 252 LALSLHNLHDSPLI--PSEEDGNHSPANDQRLISDSIPAGYEGD---------------- 311
           L LSLH   D  LI   S+ D +H+P+NDQ L + S P GYE +                
Sbjct: 184 LGLSLHCFQDQGLIRGQSQADTSHAPSNDQNLFAGSAPVGYEANFQRMVAWSNNTSTENR 243

Query: 312 -EAGLWLQQP-------LLGQNSAAAFSQRVSVQASLGHSLPIRGWSN------------ 351
            + G     P       LLGQ+   AFSQR  +Q+S   S  IR W++            
Sbjct: 244 TDGGFAFNSPQMPPPQTLLGQDQ--AFSQRGPLQSSFAQS--IRAWNDLTMASADHHRTQ 303

[Close]

BLAST of Clc09G12060 vs. ExPASy TrEMBL
Match: A0A2C9UT11 (TCP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G138300 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 163/341 (47.80%), Postives = 192/341 (56.30%), Query Frame = 0


Query: 72  AAGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPS 131
           A GEIV VQGGHI+RSTGRKDRHSKV+T+KGPRDRRVRLSAHTAI+FYDVQDRLGYDRPS
Sbjct: 4   AGGEIVQVQGGHIVRSTGRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPS 63

Query: 132 KAVDWLIKKAKFAIDKLQELPPYFPIANGF-----TDPNPKTGE------TESSEFGSQL 191
           KAVDWLIKKAK AIDKL ELPP+ P AN       TD N  + E      +ESS +  QL
Sbjct: 64  KAVDWLIKKAKSAIDKLAELPPWHPTANDANGMMETDHNAGSSEMAIAEQSESSGYSFQL 123

Query: 192 HL-----PSAVENFAPP------LESLFPMSSATTSTNFQGYPVNFILRPTDPARDLALS 251
           H      PS   +F  P      ++SLFP SS T++ NFQGYP   I R T+ + DL LS
Sbjct: 124 HRQLADNPSNDSSFITPPIDPDTMKSLFPTSSTTSTMNFQGYPPEIISRTTNHSEDLGLS 183

Query: 252 LHNLHDSPLI--PSEEDGNHSPANDQRLISDSIPAGYEGD-----------------EAG 311
           LH   D  LI   S+ D +H+P+NDQ L   S P GYE +                 + G
Sbjct: 184 LHPFQDQDLIHGQSQADTSHTPSNDQNLFGGSAPVGYEANFQRMMAWSNNTGTENRTDGG 243

Query: 312 LWL-------QQPLLGQNSAAAFSQRVSVQASLGHSLPIRGW-------SNQNR-----Q 351
                     QQ LL Q S  AFSQR  +Q+S   +  IR W       +N +R     Q
Sbjct: 244 FGFNPPQMPPQQTLLEQES--AFSQRGPLQSSFAQT--IRAWNDLTMASANHHRAQEIHQ 303

[Close]

BLAST of Clc09G12060 vs. TAIR 10
Match: AT3G15030.1 (TCP family transcription factor 4 )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 111/272 (40.81%), Postives = 137/272 (50.37%), Query Frame = 0


Query: 58  HESPPIIRRKMKTSAA-----GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSA 117
           H  PP   R   TS A     GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 118 HTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP-----IANGFTDPNPK 177
           HTAI+FYDVQDRLG+DRPSKAVDWLIKKAK +ID+L ELPP+ P     +A     P   
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRT 127

Query: 178 TGETESS---------------------EFGSQLHLPSAVENFAPP----------LESL 237
           T +T+ S                       G   H  +   +F PP          ++S 
Sbjct: 128 TAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSF 187

Query: 238 FPMSSATTST--------NF-QGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 276
           FP+  ++T          N+   +P + + R     +DL LSL +  D P        +H
Sbjct: 188 FPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHH 247

[Close]

BLAST of Clc09G12060 vs. TAIR 10
Match: AT3G15030.2 (TCP family transcription factor 4 )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 111/272 (40.81%), Postives = 137/272 (50.37%), Query Frame = 0


Query: 58  HESPPIIRRKMKTSAA-----GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSA 117
           H  PP   R   TS A     GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 118 HTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP-----IANGFTDPNPK 177
           HTAI+FYDVQDRLG+DRPSKAVDWLIKKAK +ID+L ELPP+ P     +A     P   
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRT 127

Query: 178 TGETESS---------------------EFGSQLHLPSAVENFAPP----------LESL 237
           T +T+ S                       G   H  +   +F PP          ++S 
Sbjct: 128 TAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSF 187

Query: 238 FPMSSATTST--------NF-QGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 276
           FP+  ++T          N+   +P + + R     +DL LSL +  D P        +H
Sbjct: 188 FPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHH 247

[Close]

BLAST of Clc09G12060 vs. TAIR 10
Match: AT3G15030.3 (TCP family transcription factor 4 )

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-39
Identity = 111/272 (40.81%), Postives = 137/272 (50.37%), Query Frame = 0


Query: 58  HESPPIIRRKMKTSAA-----GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSA 117
           H  PP   R   TS A     GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA
Sbjct: 8   HPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSA 67

Query: 118 HTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP-----IANGFTDPNPK 177
           HTAI+FYDVQDRLG+DRPSKAVDWLIKKAK +ID+L ELPP+ P     +A     P   
Sbjct: 68  HTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAANAKPRRT 127

Query: 178 TGETESS---------------------EFGSQLHLPSAVENFAPP----------LESL 237
           T +T+ S                       G   H  +   +F PP          ++S 
Sbjct: 128 TAKTQISPSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNESSFLPPSMDSDSIADTIKSF 187

Query: 238 FPMSSATTST--------NF-QGYPVNFILRPTDPARDLALSLHNLHDSPLIPSEEDGNH 276
           FP+  ++T          N+   +P + + R     +DL LSL +  D P        +H
Sbjct: 188 FPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHH 247

[Close]

BLAST of Clc09G12060 vs. TAIR 10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 )

HSP 1 Score: 159.5 bits (402), Expect = 5.1e-39
Identity = 107/239 (44.77%), Postives = 139/239 (58.16%), Query Frame = 0


Query: 60  SPPIIRRKMKTSA------AGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAH 119
           SPP++  +   SA       GEIV VQGGHI+RSTGRKDRHSKV TAKGPRDRRVRLSA 
Sbjct: 13  SPPLLEMRHHQSATENGGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAP 72

Query: 120 TAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFP----------IANG--- 179
           TAI+FYDVQDRLG+DRPSKAVDWLI KAK AID L +LPP+ P           AN    
Sbjct: 73  TAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQLPPWNPADTLRQHAAAAANAKPR 132

Query: 180 -----FTDPNPKTGETESSEFGSQ-----LHLPSAV--ENFAPPLESLFPMSSATTSTNF 239
                 + P P+  ETE    G +       LP+++  ++ A  ++S FP+  A+T  ++
Sbjct: 133 KTKTLISPPPPQPEETEHHRIGEEEDNESSFLPASMDSDSIADTIKSFFPV--ASTQQSY 192

Query: 240 QGYPVNFILRPTDPARD-LALSLHNLHDSPLIPSE-EDGNHSPANDQRLISDSIPAGYE 266
              P +   R     +D L LSL +  + P  P++ E    S  ++ +L  DS  A +E
Sbjct: 193 HHQPPS---RGNTQNQDLLRLSLQSFQNGPPFPNQTEPALFSGQSNNQLAFDSSTASWE 246

[Close]

BLAST of Clc09G12060 vs. TAIR 10
Match: AT2G31070.1 (TCP domain protein 10 )

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-38
Identity = 95/177 (53.67%), Postives = 112/177 (63.28%), Query Frame = 0


Query: 74  GEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKA 133
           GEIV VQGGHI+R+TGRKDRHSKVFT+KGPRDRRVRLSAHTAI+FYDVQDRLGYDRPSKA
Sbjct: 13  GEIVEVQGGHIIRATGRKDRHSKVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKA 72

Query: 134 VDWLIKKAKFAIDKLQELPPYFPIANGFTDPNPKTGETES------SEFGSQLHLPSAVE 193
           VDWLIKKAK AIDKL+            T   P   + ES       E   Q    +A  
Sbjct: 73  VDWLIKKAKTAIDKLE----LGETTTTTTRQEPVNTKPESPTLVFQRENNDQTQFVAANL 132

Query: 194 NFAPPLESLFPMSSAT-----TSTNFQGYP----VNFILRPTDP----ARDLALSLH 232
           +    +++ FP ++ T     T+ NFQ YP     N + R T P    ++DL LSLH
Sbjct: 133 DPEDAMKTFFPATTTTNGGGGTNINFQNYPHQDDNNMVSRTTTPPPNLSQDLGLSLH 185

The following BLAST results are available for this feature:

BLAST of Clc09G12060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529225.1	1.5e-112	74.83	transcription factor TCP10-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589264.1	1.9e-112	74.83	Transcription factor TCP10, partial [Cucurbita argyrosperma subsp. sororia] >KAG...	[more]
XP_022989259.1	9.4e-112	75.00	transcription factor TCP10-like [Cucurbita maxima]	[more]
XP_022930891.1	1.5e-109	73.08	transcription factor TCP10-like [Cucurbita moschata]	[more]
XP_038877605.1	4.1e-91	87.18	transcription factor TCP10-like [Benincasa hispida]	[more]

BLAST of Clc09G12060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPR5	2.5e-38	40.81	Transcription factor TCP4 OS=Arabidopsis thaliana OX=3702 GN=TCP4 PE=1 SV=1	[more]
Q9MAH8	7.2e-38	44.77	Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1	[more]
A2WM14	2.1e-37	39.93	Transcription factor PCF5 OS=Oryza sativa subsp. indica OX=39946 GN=PCF5 PE=4 SV...	[more]
Q8LT07	2.1e-37	39.93	Transcription factor PCF5 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF5 PE=2 ...	[more]
O82277	2.1e-37	53.67	Transcription factor TCP10 OS=Arabidopsis thaliana OX=3702 GN=TCP10 PE=1 SV=1	[more]

BLAST of Clc09G12060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JNV1	4.6e-112	75.00	transcription factor TCP10-like OS=Cucurbita maxima OX=3661 GN=LOC111486387 PE=4...	[more]
A0A6J1ES58	7.3e-110	73.08	transcription factor TCP10-like OS=Cucurbita moschata OX=3662 GN=LOC111437241 PE...	[more]
A0A1Q3C6T3	2.1e-61	46.88	TCP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_1946...	[more]
A0A6A6K413	2.8e-61	46.67	TCP domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_011489 PE=4...	[more]
A0A2C9UT11	2.4e-60	47.80	TCP domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G138300 PE...	[more]

BLAST of Clc09G12060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15030.1	1.7e-39	40.81	TCP family transcription factor 4	[more]
AT3G15030.2	1.7e-39	40.81	TCP family transcription factor 4	[more]
AT3G15030.3	1.7e-39	40.81	TCP family transcription factor 4	[more]
AT1G53230.1	5.1e-39	44.77	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT2G31070.1	1.5e-38	53.67	TCP domain protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 89..162 e-value: 2.5E-30 score: 106.1
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 90..148 score: 31.964437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 325..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..353
None	No IPR available	PANTHER	PTHR31072:SF136	TRANSCRIPTION FACTOR TCP10	coord: 70..341
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 70..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G12060.2	Clc09G12060.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity