Clc09G11525 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G11525
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein translation factor SUI1 homolog
Location	ClcChr09: 10209457 .. 10209795 (-)
RNA-Seq Expression	Clc09G11525
Synteny	Clc09G11525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGAATTAGACTACCAGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA

mRNA sequence

ATGGTTGAATTAGACTACCAGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA

Coding sequence (CDS)

ATGGTTGAATTAGACTACCAGATCCCATCCGCATTTGATCCATTCGCCGAAGCCAAGGATTCGGATGCCCCCGGAACCAAAGAGTATGTTCATATTCGCGTCCAACAAAGGAATGGGAAGAAGTGCTTGACTACAGTCCAAGGTCTGAAGAAAGAGTTTAGCTACGAGAAGATTCTCAAAGACGTGAAGAAGGAATTCTGCTGTAATGGTAACGTTGTGCAAGACAAAGAATTGGGGAAGATAATTCAACTTCAAGGCGATCAGCGTAAGAACGTCTCTCAGTTTCTTGTTCATGCTGGTCTGGTCAAGAAGGATCAGATCAAGATTCATGGGTTTTGA

Protein sequence

MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF

Homology

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BLAST of Clc09G11525 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 5.7e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

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BLAST of Clc09G11525 vs. NCBI nr
Match: XP_022976609.1 (protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 protein translation factor SUI1 homolog 1 [Cucurbita maxima] >KAG6592045.1 Protein translation factor SUI1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54
Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. NCBI nr
Match: XP_023536045.1 (protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 220.7 bits (561), Expect = 6.3e-54
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA++KDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADSKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. NCBI nr
Match: XP_022936190.1 (protein translation factor SUI1 homolog 1 [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 6.3e-54
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of Clc09G11525 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 1.9e-45
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc09G11525 vs. ExPASy Swiss-Prot
Match: Q9SQF4 (Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.6e-45
Identity = 89/113 (78.76%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD I+IHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113

[Close]

BLAST of Clc09G11525 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.3e-45
Identity = 88/113 (77.88%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M +L+ Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc09G11525 vs. ExPASy Swiss-Prot
Match: P56330 (Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFAEA   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of Clc09G11525 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.6e-44
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEK 60
           M +LD QIP+AFDPFAEA   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 61  ILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           ILKD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of Clc09G11525 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 39  MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 98

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 99  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of Clc09G11525 vs. ExPASy TrEMBL
Match: A0A0A0K771 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. ExPASy TrEMBL
Match: A0A1S3BI45 (protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103490142 PE=3 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.8e-55
Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. ExPASy TrEMBL
Match: A0A6J1IJY4 (protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC111476953 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.4e-54
Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. ExPASy TrEMBL
Match: A0A6J1FCX8 (protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC111442862 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 107/112 (95.54%), Postives = 110/112 (98.21%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD+QIPSAFDPFA+AKDSDAPGTK YVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKAYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           DVKKEFCCNGNVVQD+ELGKIIQLQGDQRKNVSQFLV AGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDRELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-52
Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFAEAKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLV  G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 201.8 bits (512), Expect = 2.8e-52
Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60
           MVELD QIPSA+DPFAEAKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SYE+ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRK VSQFLV  G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of Clc09G11525 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.4e-46
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc09G11525 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-46
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of Clc09G11525 vs. TAIR 10
Match: AT5G54760.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-46
Identity = 90/113 (79.65%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   MVELDYQIPSAFDPFAEAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKIL 60
           M ELD Q+P+AFDPFA+A   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 61  KDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVHAGLVKKDQIKIHGF 113
           KD+KKEFCCNG VVQD ELG++IQLQGDQRKNVS FLV AGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of Clc09G11525 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139787.1	5.7e-55	97.32	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]
KAA0025154.1	5.7e-55	97.32	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
XP_022976609.1	2.8e-54	96.43	protein translation factor SUI1 homolog 1 [Cucurbita maxima] >XP_022976610.1 pro...	[more]
XP_023536045.1	6.3e-54	95.54	protein translation factor SUI1 homolog 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022936190.1	6.3e-54	95.54	protein translation factor SUI1 homolog 1 [Cucurbita moschata]	[more]

BLAST of Clc09G11525 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41568	1.9e-45	79.65	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SQF4	5.6e-45	78.76	Protein translation factor SUI1 homolog OS=Brassica oleracea OX=3712 PE=3 SV=1	[more]
Q94JV4	7.3e-45	77.88	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P56330	1.6e-44	75.65	Protein translation factor SUI1 homolog OS=Zea mays OX=4577 GN=TIF PE=3 SV=1	[more]
A6MZM2	1.6e-44	75.65	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]

BLAST of Clc09G11525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHR8	2.8e-55	97.32	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0K771	2.8e-55	97.32	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G209580 PE=3 S...	[more]
A0A1S3BI45	2.8e-55	97.32	protein translation factor SUI1 homolog 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1IJY4	1.4e-54	96.43	protein translation factor SUI1 homolog 1 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FCX8	3.1e-54	95.54	protein translation factor SUI1 homolog 1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Clc09G11525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	2.8e-52	85.71	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	2.8e-52	85.71	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	1.4e-46	79.65	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	1.8e-46	79.65	Translation initiation factor SUI1 family protein	[more]
AT5G54760.2	1.8e-46	79.65	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 27..100 e-value: 5.0E-24 score: 84.6
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 30..100 score: 22.460489
None	No IPR available	GENE3D	3.30.780.10		coord: 2..112 e-value: 3.4E-45 score: 155.3
None	No IPR available	PANTHER	PTHR10388:SF65	PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG	coord: 1..112
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 1..112
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 7..112 e-value: 5.5E-52 score: 172.9
IPR005874	Eukaryotic translation initiation factor SUI1	PIRSF	PIRSF004499	Transl_init_SUI1_Euk	coord: 1..112 e-value: 2.0E-47 score: 158.1
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 28..111 e-value: 1.54302E-47 score: 144.985
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 4..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G11525.1	Clc09G11525.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity