Clc09G11250 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGGACCTGAAATGCCATCAGCTGAGCTGCTTGCTGCTGCAGCAAAACTAACCGAAGCACAAACTGAGCTTAGGTATTTCATTAAATGTTATGAATATTTATTTGATCATGTAATCTTGAGATCAAAATTTTTGAACAGACAAATCGGTGAAACGACTTATTTCCATCTTCTCTATATTTCCAGGGAAGCTGAGTTGGAGGAAGACGATGAGTTATTTGTCGGGCCTCCACCACCTGCTATGGTTGCAGAAGCTGAAACAGCCAATGAGGCTGAGCGGTTTGAAGAGGTATGCTTTACTCAGATTTGTTGCTTGTAATATATGCTAACATAAGTTTGGTGGGGCAAAAAATTCAATCTTTAAATTTCTAATATTATTGTAAAAGGAGGATATACCATTTGTTGAGTTGATTGTCAACCCTCTCCTCAGGAGTTAGTTAAAGCTACTTCATTCACCTGATGTCTGATGGGAAGAGGAGTCAAGTTTATTTATTTCAATTTGCTACAAGATGGATAAATTGAGACTGGGTCCTTTTTCTATCATTAGTTTTTGGACTTCTATTTTTGTTGGACTTGTTTTTTTGTATGCCCTTGTTATTCTTTAATTTTCCCAAGGAAATCTTGGCTTCTTACCAAAAAAAAAAAAAAAAACAAAGAAGAAGAATAAATTGAGACGAGAATTGTTATACAAAAAGATCTCATATGTAGTTAAAAATCTCTTTTCAAAAGGGAACAAAGGTTCTATAATGTTAGCATATTGGTTGATGCACAAGCATTCCATGAAAAATGTTATATTTTAACCAATAATATTTTCATCTCAGGTTTCAAGAATTATGGATGTTGAGGGAGATAGTCCATACGACATATTGGGATTGAACCCGAAACCTTTCCATTGAAAATATTAAGAGAGGTATGATTTTTGAGTTATTTATAAAGTACAATGTTCCCTTGCCCAAAAAAATATTAGTAACTTCCTAGCTCTTGAAACTTGTATATTTCATATTAACTAGTATTATGATCAACTACTGTAAATTATATCCAAGGATTGATATATGAATCTACGATTGCAATCTATAGGAGATTTGATAAAATCATGAATTTATTCCCCAATGCCCAGCATTTTAAACGGCACTTCAATAATTTCTGGTGCATTTTCTTCAGGTACTGGAAAATGTCACTTTTGGTGCATCCAGACAAATGCTCTCATCCTCAGGCCAACCAAGCTTTTATTCGATTGAATAATGCTTTCAAGGAATTACAAGATCCTGATAAGGTAGTTCTTTCCTCCTCAATTGATGTGTACTTGATTTTGACAATGAGTAATCTTTTAGTTGCCCGATCTCTTATCTCGGTTGAAACCAATATTTAGCTTGTATTTACTCTTTTTTTTCCTGATTAAATTAGAAATCTGAATGTATAGCTTGTATTTGCAAACTAGATCTCTAGAGATATAGAATTTCATACATAAAAGGTAAATGGTAAATCTTGAGGTCGCAACATTCTCCAACATGATGTACAAAAAAGAACAAAAAAAAAAAAAAAAAACTCAAAATGTCTTGCAGAATTGAAGCTTCTAGCTACATTTTGAGCTTCTTGGTCGTGGTGCGAAATTTTAGTTGGGAACTTGTTTAGCCTATTATTGATTGACACATGTGCTCATGCATATTTCGGTCTTCTAGCACTAGAGTTTTGCGATGCACATCTTTATTGTTTTATGATTAATTGGAGTCTCTCTCTCTTACTTTTCTTGTAAATTTTCGTTTGTGTGTTTGTTTTTTTCCTGGGATTTAGATTAAAAGCTATATAGCAACGTGTCAATTCAAACTATTTTTAGAAATTTAATATACAAGACAATTGAGGATTTTCTGTTCTTTATATGAATATGAACGTTAAATGGTCTCAGAAATACCTTGTTCACTAAATGCACAATTGATATGTAATGAAGGGCTACCAAATGTAACAAATGAAAAATGCTTCGTAAGATGATGCAGGCAGAAAGCTGATTCTTTCAATTTCAATTTATATTTCTGTAGTCTCATTACATCGGTACTTTTAAGAAGAAACACTAAAAGGTGAAGTTGATAAAGAAACATGTGTACCACTCAATACAAAGAAACTTCATTGGTAATTGCATCAACATGACTTGAAAAAGTGGACCAGCTTCTTACATGTAGTGTTTCAAATTTGCAGCGGAAGGCACTCGATGATAAAATTAAACTCAAGGAGGAACAGGAGCAATTTAAAGTATGCATCTTGATTCAAGTTCTACATACCAGTATGAGTGCAAAGGTCAATTTTGAATTAATGTTTTTACTTGAATAGGTTGAATTAAGAGGGATGCGTGAAGCTGCAAAATGGAGAAAATCACAAGGTATCGGTGTCTATTCATGAGGTCTATGTTCTCTTTATACATCGACAGTGGAGTTCTACTTCATTTTACTCTTCTTTTCTCCTATTTTTAGGTTGTTAGAACTTTTTTTTTTGATAAGGGTAAAACTGAACCATCTTAGCAATTGTCCATGAAAGGGAGGGAGGGATTTTAGGGAACTAGAAAAAGGTACACAAAGGAAGTAGAGATAGCGGTTTTCTTTGTGGGGATGGAGATGGGGTACGGATGGGACTTTCACTCTAATATTATTTTGGAGTCGAGGATGGGCAATGACATTGAACCTAGATCCATCACCATCCTTTAAATTTTAGTTACTTTTTAGTATTTGAAAAAAAAACTTAACTGCTACATCATAAATGTCCAATAAAACAGTGACCAATTTTTGCGACTATTCACAAATAACATACTGTTGTGTGTGAATTAGTGTGAATTGTGTTTGCTTTTGCTGTGGAAACTATACATGAATATTTCCATTAGAAATTGGTGCAATTTTTTGGGGGTGCAATCAGTGGAACCATGTCTTTATTTCATCCTGTCAATGAAACTTTTCCTTTATCTGTAGGAATATCAATGGAGGGTGATGATGAACTCCTTGCCGACATGGATGCTGAAGTTAAAGTAGAACCCAAAAGAGATGAATGGATGACCAGCCTACCTCCTGAAAGAAAGGTAAGGCACCTTTTTTTTTTTCCCCTATTGATGCTAATTCTCTTTTACATTTACTGCATGTACCGTTTCAAATAATCTACACTTTTCTCAAGCCATGTCTCACCCTCTGTCAATATGTCAGGAGAATAATGATTTCTTATTAGATGTTTTAAATTTCTGAAAAAGGTTGCAGAGCTGTAGCATTATTTCATTCAAGGATCCTTACTAAATTTTCATTAAAATGGGAAATAAAATAAGGGTTTTTGTCTTAGAAAATAGAGGAAGGTTACATGACTGATATTCATTTTATACTTCCATTAGCATTTTGAAGGTTCAAAACCGTCCTTTAGAGGTAGAAGAACGAACAGAACTTTAAGTTGGGCATTTCTTATGATGTCTTATAACTTCGACACCATTAATCATGTGGCATGCTTTACTTGATGTTAAGCCTGAACACTCTTTAATATGGTTATTATCAAGTTTGCGTCTTAAACTTTTTGCCTTCTCTTCCAGCCTGGCATGACTATGCAATCTTCTAGATTCAGCAAGAGCTCCAAGGAAGGTCGCGGCGATACGAGTGTTTGGACCGACACTCCTTCCGACAGAGCTCAGAAAGCAAAGATGAGGTGCACACTTGTTACCTCGAAGAGTCAAAAGTTTAATTTCAATTCCCATCCTAAACAAAATACAAACTATTGTTGATTCAATCTTTCATCTGTCAGTTACTTGGAAGCATATAATGAAGCCGCTGCACTTGCTTCGAATGAAGAAGAAGCGAAGAAGTATAGTTCAGAGTCAGCTTTAGTGGACAAATATAATCAAGACAAACGCTCCAAATCGCTCGTAGAGAAGCACCGTGAAGGGGTGAAAAGCCGTGGAAAGAAAAAATTGAAGCAAGTGGCGGAGAAAGAAGACGACTGGGTGGGAAAACATCCATGGAAGCCTTGGGATCGTGAGAAGGATTTAACTGCTGGTAGGAAGACCATAAATTTTGATCCCGAGAACATGGCTCAGGGCTTAGGTTCCAGATTTTCCTCAGGAAGCTACCAAAGGAATTTTCTTTAG ATGCTTGGACCTGAAATGCCATCAGCTGAGCTGCTTGCTGCTGCAGCAAAACTAACCGAAGCACAAACTGAGCTTAGGGAAGCTGAGTTGGAGGAAGACGATGAGTTATTTGTCGGGCCTCCACCACCTGCTATGGTTGCAGAAGCTGAAACAGCCAATGAGGCTGAGCGGTTTGAAGAGCATTTTAAACGGCACTTCAATAATTTCTGGTGCATTTTCTTCAGGTACTGGAAAATGTCACTTTTGGTGCATCCAGACAAATGCTCTCATCCTCAGGCCAACCAAGCTTTTATTCGATTGAATAATGCTTTCAAGGAATTACAAGATCCTGATAAGCGGAAGGCACTCGATGATAAAATTAAACTCAAGGAGGAACAGGAGCAATTTAAAGTTGAATTAAGAGGGATGCGTGAAGCTGCAAAATGGAGAAAATCACAAGGAATATCAATGGAGGGTGATGATGAACTCCTTGCCGACATGGATGCTGAAGTTAAAGTAGAACCCAAAAGAGATGAATGGATGACCAGCCTACCTCCTGAAAGAAAGCCTGGCATGACTATGCAATCTTCTAGATTCAGCAAGAGCTCCAAGGAAGGTCGCGGCGATACGAGTGTTTGGACCGACACTCCTTCCGACAGAGCTCAGAAAGCAAAGATGAGTTACTTGGAAGCATATAATGAAGCCGCTGCACTTGCTTCGAATGAAGAAGAAGCGAAGAAGTATAGTTCAGAGTCAGCTTTAGTGGACAAATATAATCAAGACAAACGCTCCAAATCGCTCGTAGAGAAGCACCGTGAAGGGGTGAAAAGCCGTGGAAAGAAAAAATTGAAGCAAGTGGCGGAGAAAGAAGACGACTGGGTGGGAAAACATCCATGGAAGCCTTGGGATCGTGAGAAGGATTTAACTGCTGGTAGGAAGACCATAAATTTTGATCCCGAGAACATGGCTCAGGGCTTAGGTTCCAGATTTTCCTCAGGAAGCTACCAAAGGAATTTTCTTTAG ATGCTTGGACCTGAAATGCCATCAGCTGAGCTGCTTGCTGCTGCAGCAAAACTAACCGAAGCACAAACTGAGCTTAGGGAAGCTGAGTTGGAGGAAGACGATGAGTTATTTGTCGGGCCTCCACCACCTGCTATGGTTGCAGAAGCTGAAACAGCCAATGAGGCTGAGCGGTTTGAAGAGCATTTTAAACGGCACTTCAATAATTTCTGGTGCATTTTCTTCAGGTACTGGAAAATGTCACTTTTGGTGCATCCAGACAAATGCTCTCATCCTCAGGCCAACCAAGCTTTTATTCGATTGAATAATGCTTTCAAGGAATTACAAGATCCTGATAAGCGGAAGGCACTCGATGATAAAATTAAACTCAAGGAGGAACAGGAGCAATTTAAAGTTGAATTAAGAGGGATGCGTGAAGCTGCAAAATGGAGAAAATCACAAGGAATATCAATGGAGGGTGATGATGAACTCCTTGCCGACATGGATGCTGAAGTTAAAGTAGAACCCAAAAGAGATGAATGGATGACCAGCCTACCTCCTGAAAGAAAGCCTGGCATGACTATGCAATCTTCTAGATTCAGCAAGAGCTCCAAGGAAGGTCGCGGCGATACGAGTGTTTGGACCGACACTCCTTCCGACAGAGCTCAGAAAGCAAAGATGAGTTACTTGGAAGCATATAATGAAGCCGCTGCACTTGCTTCGAATGAAGAAGAAGCGAAGAAGTATAGTTCAGAGTCAGCTTTAGTGGACAAATATAATCAAGACAAACGCTCCAAATCGCTCGTAGAGAAGCACCGTGAAGGGGTGAAAAGCCGTGGAAAGAAAAAATTGAAGCAAGTGGCGGAGAAAGAAGACGACTGGGTGGGAAAACATCCATGGAAGCCTTGGGATCGTGAGAAGGATTTAACTGCTGGTAGGAAGACCATAAATTTTGATCCCGAGAACATGGCTCAGGGCTTAGGTTCCAGATTTTCCTCAGGAAGCTACCAAAGGAATTTTCTTTAG MLGPEMPSAELLAAAAKLTEAQTELREAELEEDDELFVGPPPPAMVAEAETANEAERFEEHFKRHFNNFWCIFFRYWKMSLLVHPDKCSHPQANQAFIRLNNAFKELQDPDKRKALDDKIKLKEEQEQFKVELRGMREAAKWRKSQGISMEGDDELLADMDAEVKVEPKRDEWMTSLPPERKPGMTMQSSRFSKSSKEGRGDTSVWTDTPSDRAQKAKMSYLEAYNEAAALASNEEEAKKYSSESALVDKYNQDKRSKSLVEKHREGVKSRGKKKLKQVAEKEDDWVGKHPWKPWDREKDLTAGRKTINFDPENMAQGLGSRFSSGSYQRNFL Homology
BLAST of Clc09G11250 vs. NCBI nr
Match: XP_038898675.1 (DNA ligase 1 [Benincasa hispida]) HSP 1 Score: 576.2 bits (1484), Expect = 1.8e-160 Identity = 310/348 (89.08%), Postives = 315/348 (90.52%), Query Frame = 0
BLAST of Clc09G11250 vs. NCBI nr
Match: XP_008461948.1 (PREDICTED: uncharacterized protein LOC103500427 [Cucumis melo]) HSP 1 Score: 571.6 bits (1472), Expect = 4.4e-159 Identity = 306/348 (87.93%), Postives = 315/348 (90.52%), Query Frame = 0
BLAST of Clc09G11250 vs. NCBI nr
Match: XP_004150393.1 (uncharacterized protein LOC101213388 [Cucumis sativus] >KGN44664.2 hypothetical protein Csa_016603 [Cucumis sativus]) HSP 1 Score: 567.4 bits (1461), Expect = 8.2e-158 Identity = 304/348 (87.36%), Postives = 313/348 (89.94%), Query Frame = 0
BLAST of Clc09G11250 vs. NCBI nr
Match: XP_023521008.1 (DNA ligase 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 550.1 bits (1416), Expect = 1.4e-152 Identity = 300/350 (85.71%), Postives = 310/350 (88.57%), Query Frame = 0
BLAST of Clc09G11250 vs. NCBI nr
Match: KAG7011072.1 (hypothetical protein SDJN02_27870, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 550.1 bits (1416), Expect = 1.4e-152 Identity = 300/350 (85.71%), Postives = 310/350 (88.57%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy Swiss-Prot
Match: Q4V893 (GPALPP motifs-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Gpalpp1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.6e-08 Identity = 54/166 (32.53%), Postives = 81/166 (48.80%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy Swiss-Prot
Match: Q8IXQ4 (GPALPP motifs-containing protein 1 OS=Homo sapiens OX=9606 GN=GPALPP1 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 9.5e-08 Identity = 54/167 (32.34%), Postives = 82/167 (49.10%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy Swiss-Prot
Match: Q69ZC8 (GPALPP motifs-containing protein 1 OS=Mus musculus OX=10090 GN=Gpalpp1 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-07 Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy Swiss-Prot
Match: Q5R863 (GPALPP motifs-containing protein 1 OS=Pongo abelii OX=9601 GN=GPALPP1 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.2e-07 Identity = 54/167 (32.34%), Postives = 81/167 (48.50%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy Swiss-Prot
Match: Q3ZBM6 (GPALPP motifs-containing protein 1 OS=Bos taurus OX=9913 GN=GPALPP1 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 8.3e-04 Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy TrEMBL
Match: A0A1S3CFW3 (uncharacterized protein LOC103500427 OS=Cucumis melo OX=3656 GN=LOC103500427 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 2.1e-159 Identity = 306/348 (87.93%), Postives = 315/348 (90.52%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy TrEMBL
Match: A0A6J1DVD5 (uncharacterized protein LOC111023459 OS=Momordica charantia OX=3673 GN=LOC111023459 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.6e-153 Identity = 294/348 (84.48%), Postives = 311/348 (89.37%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy TrEMBL
Match: A0A6J1EHJ8 (DNA ligase 1 OS=Cucurbita moschata OX=3662 GN=LOC111433443 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 8.6e-153 Identity = 300/349 (85.96%), Postives = 310/349 (88.83%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy TrEMBL
Match: A0A2C9WFD9 (J domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G191800 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.3e-134 Identity = 261/348 (75.00%), Postives = 293/348 (84.20%), Query Frame = 0
BLAST of Clc09G11250 vs. ExPASy TrEMBL
Match: A0A5N6RPR7 (J domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_018184 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 1.3e-132 Identity = 259/348 (74.43%), Postives = 292/348 (83.91%), Query Frame = 0
BLAST of Clc09G11250 vs. TAIR 10
Match: AT1G65280.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 421.8 bits (1083), Expect = 5.2e-118 Identity = 231/356 (64.89%), Postives = 280/356 (78.65%), Query Frame = 0
BLAST of Clc09G11250 vs. TAIR 10
Match: AT5G22080.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04 Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0
BLAST of Clc09G11250 vs. TAIR 10
Match: AT5G22080.2 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04 Identity = 41/135 (30.37%), Postives = 65/135 (48.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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