Clc09G11240 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G11240
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionJ domain-containing protein
LocationClcChr09: 9931005 .. 9933441 (+)
RNA-Seq ExpressionClc09G11240
SyntenyClc09G11240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
atgggtagtcggaggaagaagaagcgtactgcggattcagaagagtcttcttcctcgtcaccgtcctcctccgatgattccgacagctcctctatgcggtcgcgccgccatcaccgcagtggcagttctagaagggagaaggacaaggaacgagagtcgaggattagagatagggagaggaagagaaaagataggaatagggagagagatagaaagaggagaaagaagaaattgagaagggagagcaagagaaagagggatgattatggatctgagagtgataacgagtcctcccattcaggggattctgttgatagcaagtctgatagacggaaggtgaagattattgagcctgaagtgattgtacgccagctgctgaaggaatttcctgatgttggaaatgacttaaaacaggttctttccttgaatttttgtggtatttgttggtttcagtttgttctgattatgtttctcatttgacattgttgtgcatacttgttgaatctttgaattctagttgggaagggttagcttcgttagagatggatggcttgttggcagggggtttgaaactgagaaatgcatactaatacaagagaaggggaaatgaggtatccccacaagaccagtgggttacaaaaagaactctcaattggcaaaactatgcataaacttctagtttaaagactccgcagagaaagaacagcaagttagtgaaaacttttccaaaagctctcaatgctcgacttgaaacttgtaggcaagggaggttgttgacgtggatcaagcgattcatctcttttgaaacagacttatttagagcaaacttcccttccttcaacctctccatcataggcgattttttctaatagacccctgatgggatggttgagatagtagcaaaactcttccaattttctagtcctctcaaaattttttcctcaacaggcttctagaaagcttgtttctctgaattagttcaaaagccattccatgtatggtaatttatcaaaggagcatctgaagcttctctggtattttcatgctttgttcgcctcctacatttatgctctataccagaataaattttgctggatgccaattccaaaatgtggaaacaggtcctctggttttctgagtaaagtgccatttacttgagcttattttcctttttattttcgatgtaatttaacaagtaaatttgagacatttaaatttttgttcacaagaaatctactgaagtgtcatttacatgagtttatctaactttttatttttaatgtgatttaacaagtaaatttgagatatttaaatttttgttcacaggaaatctactttgatcagatttcatctatgagagaaaagaaattcgacttatagacacagaaattcacctttttatccatgaattgttaagagccgttgtttgaatgtgattgtaatgttctggtctagctttaaatcttaggaaaacagcatttattgggataaatgttagagtaggaaaaacagaggagttggctgagttcttgggctgtaaaactgaagctttgccttttaattacttgggttttgctccccttgctgtttgggatcccatcaccgacaagtttaggtctaaattgagcaaatgaagaggccttctcttatctaaaggggtgagtttaactttggctcaaataatgttaaatatttcccttatactacttttcccttctcaaaggtaaggtggatgtgacaaaagagatggattgtttggagataaggattttttttatgggatggtggtgattttaaaagatgtacccacttgtaaattggaaagggacttccgtttctatttcaaaggtgaccttgggataggacccttcaagcaatctacaactgaatacttcttggtggtgttcctttttgatgtttatctacaattggaaaagtttcttgtaagtaggtttgcttgggaaaagtgtttttttttttttttggaacttgttatgcaaaaaagtcatctggtgtttgggaaccaaagatgtaaatgatcgtcacgtttatcggggataaaatcaagtattttgatgtgatgaattaaatattttctattgccaaatatttatttgattgtttgtttatcttacactcttgatacaacgtacaagcacatttttttttaattaccatgtgatacgtttgtggttgttatctgtttccttgatcttctttcataaagagcatcttctgactgagaatgattgatgatagacaagccttaggaaACTAGCATATAACTGCTGTTTATTTTACTACACAACACTCTTACATTGCATTTAATAATTGTTTTTAATTTCCTCATCTTTTTCTTATGAGATACTCCTTTCCTAATCTTATTCGTTAATAGCTTCTCAAGATGATTGATGATGGACAAGCTGTTGATATTTAG

mRNA sequence

atgggtagtcggaggaagaagaagcgtactgcggattcagaagagtcttcttcctcgtcaccgtcctcctccgatgattccgacagctcctctatgcggtcgcgccgccatcaccgcagtggcagttctagaagggagaaggacaaggaacgagagtcgaggattagagatagggagaggaagagaaaagataggaatagggagagagatagaaagaggagaaagaagaaattgagaagggagagcaagagaaagagggatgattatggatctgagagtgataacgagtcctcccattcaggggattctgttgatagcaagtctgatagacggaaggtgaagattattgagcctgaagtgattgtacgccagctgctgaaggaatttcctgatgttggaaatgacttaaaacagCTTCTCAAGATGATTGATGATGGACAAGCTGTTGATATTTAG

Coding sequence (CDS)

atgggtagtcggaggaagaagaagcgtactgcggattcagaagagtcttcttcctcgtcaccgtcctcctccgatgattccgacagctcctctatgcggtcgcgccgccatcaccgcagtggcagttctagaagggagaaggacaaggaacgagagtcgaggattagagatagggagaggaagagaaaagataggaatagggagagagatagaaagaggagaaagaagaaattgagaagggagagcaagagaaagagggatgattatggatctgagagtgataacgagtcctcccattcaggggattctgttgatagcaagtctgatagacggaaggtgaagattattgagcctgaagtgattgtacgccagctgctgaaggaatttcctgatgttggaaatgacttaaaacagCTTCTCAAGATGATTGATGATGGACAAGCTGTTGATATTTAG

Protein sequence

MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRERKRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
Homology
BLAST of Clc09G11240 vs. NCBI nr
Match: XP_038898675.1 (DNA ligase 1 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 9.8e-58
Identity = 145/151 (96.03%), Postives = 147/151 (97.35%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGSRRKKKRT DS+E SSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESR RDRER
Sbjct: 1   MGSRRKKKRTVDSDEPSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRSRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNES HSGDSVDS+SDRRKVKIIEPEV
Sbjct: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESPHSGDSVDSRSDRRKVKIIEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI
Sbjct: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 151

BLAST of Clc09G11240 vs. NCBI nr
Match: XP_004150393.1 (uncharacterized protein LOC101213388 [Cucumis sativus] >KGN44664.2 hypothetical protein Csa_016603 [Cucumis sativus])

HSP 1 Score: 221.5 bits (563), Expect = 5.0e-54
Identity = 138/151 (91.39%), Postives = 147/151 (97.35%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGSRRKKKRTA SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREKDKERESRIRDRER
Sbjct: 1   MGSRRKKKRTAGSEDPSSSSPSSSDDSDSSSMRSRRHYRSDSSRREKDKERESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRKRRKKKLRRESKRK+DDYGSESDNESSHSG+SV++KSDRRKVKI EPEV
Sbjct: 61  KRKDRNRERDRKRRKKKLRRESKRKKDDYGSESDNESSHSGNSVNTKSDRRKVKIKEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           I+RQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Sbjct: 121 ILRQLLKDFPDIGNDLKQLLKMIDDGQAVDI 151

BLAST of Clc09G11240 vs. NCBI nr
Match: XP_008461948.1 (PREDICTED: uncharacterized protein LOC103500427 [Cucumis melo])

HSP 1 Score: 213.8 bits (543), Expect = 1.0e-51
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGSRRKK RT  SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREK+KERESRIRDRER
Sbjct: 51  MGSRRKKNRTVGSEDPSSSSPSSSDDSDSSSMRSRRHYRSDSSRREKEKERESRIRDRER 110

Query: 61  KRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKII 120
           KRK+RN    RERDRKRRKKKLRRESKRKRDD+GS+SDNESSHSGDSVD+KSDRRKVKI+
Sbjct: 111 KRKNRNRERDRERDRKRRKKKLRRESKRKRDDFGSDSDNESSHSGDSVDTKSDRRKVKIM 170

Query: 121 EPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           EPEVIVRQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Sbjct: 171 EPEVIVRQLLKDFPDIGNDLKQLLKMIDDGQAVDI 205

BLAST of Clc09G11240 vs. NCBI nr
Match: XP_022926268.1 (DNA ligase 1 [Cucurbita moschata])

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRER
Sbjct: 1   MGSGRKKKRT-ECSEPSSSSPSSSDNSDSSSMRSRRHRRSGSSRREKDKKRESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS SG+S DS+ +RRK++ +EPEV
Sbjct: 61  KRKDRNRERDRKMRKKKLRREAKRKRDDYGSESDAESSRSGNSSDSEFERRKLRSVEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           +VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Sbjct: 121 VVRELLKEFPDVGNDLKQLLSMIDDGQAVDI 150

BLAST of Clc09G11240 vs. NCBI nr
Match: KAG6607621.1 (hypothetical protein SDJN03_00963, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-45
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRER
Sbjct: 1   MGSGRKKKRT-ECSEPSSSSPSSSDNSDSSSMRSRRHRRSGSSRREKDKKRESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS SG+S DS+ +RRK++ +EPEV
Sbjct: 61  KRKDRNRERDRKMRKKKLRREAKRKRDDYGSESDAESSRSGNSSDSEFERRKLRSVEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           +VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Sbjct: 121 VVRELLKEFPDVGNDLKQLLSMIDDGQAVDI 150

BLAST of Clc09G11240 vs. ExPASy TrEMBL
Match: A0A0A0K7U1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281360 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.4e-54
Identity = 138/151 (91.39%), Postives = 147/151 (97.35%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGSRRKKKRTA SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREKDKERESRIRDRER
Sbjct: 1   MGSRRKKKRTAGSEDPSSSSPSSSDDSDSSSMRSRRHYRSDSSRREKDKERESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRKRRKKKLRRESKRK+DDYGSESDNESSHSG+SV++KSDRRKVKI EPEV
Sbjct: 61  KRKDRNRERDRKRRKKKLRRESKRKKDDYGSESDNESSHSGNSVNTKSDRRKVKIKEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           I+RQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Sbjct: 121 ILRQLLKDFPDIGNDLKQLLKMIDDGQAVDI 151

BLAST of Clc09G11240 vs. ExPASy TrEMBL
Match: A0A1S3CFW3 (uncharacterized protein LOC103500427 OS=Cucumis melo OX=3656 GN=LOC103500427 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.1e-52
Identity = 136/155 (87.74%), Postives = 146/155 (94.19%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGSRRKK RT  SE+ SSSSPSSSDDSDSSSMRSRRH+RS SSRREK+KERESRIRDRER
Sbjct: 51  MGSRRKKNRTVGSEDPSSSSPSSSDDSDSSSMRSRRHYRSDSSRREKEKERESRIRDRER 110

Query: 61  KRKDRN----RERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKII 120
           KRK+RN    RERDRKRRKKKLRRESKRKRDD+GS+SDNESSHSGDSVD+KSDRRKVKI+
Sbjct: 111 KRKNRNRERDRERDRKRRKKKLRRESKRKRDDFGSDSDNESSHSGDSVDTKSDRRKVKIM 170

Query: 121 EPEVIVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           EPEVIVRQLLK+FPD+GNDLKQLLKMIDDGQAVDI
Sbjct: 171 EPEVIVRQLLKDFPDIGNDLKQLLKMIDDGQAVDI 205

BLAST of Clc09G11240 vs. ExPASy TrEMBL
Match: A0A6J1EHJ8 (DNA ligase 1 OS=Cucurbita moschata OX=3662 GN=LOC111433443 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 7.1e-46
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRER
Sbjct: 1   MGSGRKKKRT-ECSEPSSSSPSSSDNSDSSSMRSRRHRRSGSSRREKDKKRESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS SG+S DS+ +RRK++ +EPEV
Sbjct: 61  KRKDRNRERDRKMRKKKLRREAKRKRDDYGSESDAESSRSGNSSDSEFERRKLRSVEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           +VR+LLKEFPDVGNDLKQLL MIDDGQAVDI
Sbjct: 121 VVRELLKEFPDVGNDLKQLLSMIDDGQAVDI 150

BLAST of Clc09G11240 vs. ExPASy TrEMBL
Match: A0A6J1IUN5 (uncharacterized protein LOC111480750 OS=Cucurbita maxima OX=3661 GN=LOC111480750 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 8.4e-39
Identity = 115/139 (82.73%), Postives = 126/139 (90.65%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGS RKKKRT +  E SSSSPSSSD+SDSSSMRSRRH RSGSSRREKDK+RESRIRDRER
Sbjct: 1   MGSGRKKKRT-EYSEPSSSSPSSSDNSDSSSMRSRRHGRSGSSRREKDKKRESRIRDRER 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDRNRERDRK RKKKLRRE+KRKRDDYGSESD ESS SG+S DS+ +RRK+  IEPEV
Sbjct: 61  KRKDRNRERDRKMRKKKLRREAKRKRDDYGSESDAESSRSGNSSDSEFERRKLGTIEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQL 140
           +VR+LLKEFPDVGNDLKQ+
Sbjct: 121 VVRELLKEFPDVGNDLKQV 138

BLAST of Clc09G11240 vs. ExPASy TrEMBL
Match: A0A6J1DVD5 (uncharacterized protein LOC111023459 OS=Momordica charantia OX=3673 GN=LOC111023459 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-29
Identity = 109/151 (72.19%), Postives = 119/151 (78.81%), Query Frame = 0

Query: 1   MGSRRKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKDKERESRIRDRER 60
           MGS RKK RT DS E SSSSPSS DDSD+S+ RSRRHHR G SRREKDK+RES      R
Sbjct: 1   MGSGRKKWRTDDS-EPSSSSPSSDDDSDTSASRSRRHHRGGGSRREKDKKRES------R 60

Query: 61  KRKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEV 120
           KRKDR RERDRKRRKKK RRE KRKR DY SESD+ SS        +S+  KV+ IEPEV
Sbjct: 61  KRKDRMRERDRKRRKKKSRREGKRKR-DYFSESDDGSS-------GESELEKVR-IEPEV 120

Query: 121 IVRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           +VRQLLKEFPDVG+DL+QLLKMIDDGQAVDI
Sbjct: 121 VVRQLLKEFPDVGDDLEQLLKMIDDGQAVDI 135

BLAST of Clc09G11240 vs. TAIR 10
Match: AT1G65280.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-09
Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = 0

Query: 5   RKKKRTADSEESSSSSPSSSDDSDSSSMRSRRHHRSGSSRREKD---KERESRIRDRERK 64
           ++   + D   SS++S SSS  SD S   SR+  +    RR+ D    ERE R R RE++
Sbjct: 6   KRDSDSGDDTPSSATSSSSSYSSDESDSSSRKWRKKQKERRKSDGGSYEREKR-RKREKE 65

Query: 65  RKDRNRERDRKRRKKKLRRESKRKRDDYGSESDNESSHSGDSVDSKSDRRKVKIIEPEVI 124
           RK +  ER ++R+++ ++++ K K+ +Y  ESD ES    DS   + D       +PE +
Sbjct: 66  RKRKKIER-KERKRRDMKKKKKTKKREY--ESDTESYSGSDSFSDQED-------DPETV 125

Query: 125 VRQLLKEFPDVGNDLKQLLKMIDDGQAVDI 152
           V+++L EFP+VGNDLKQLLKMIDDGQAVDI
Sbjct: 126 VKEMLLEFPNVGNDLKQLLKMIDDGQAVDI 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038898675.19.8e-5896.03DNA ligase 1 [Benincasa hispida][more]
XP_004150393.15.0e-5491.39uncharacterized protein LOC101213388 [Cucumis sativus] >KGN44664.2 hypothetical ... [more]
XP_008461948.11.0e-5187.74PREDICTED: uncharacterized protein LOC103500427 [Cucumis melo][more]
XP_022926268.11.5e-4583.44DNA ligase 1 [Cucurbita moschata][more]
KAG6607621.11.5e-4583.44hypothetical protein SDJN03_00963, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7U12.4e-5491.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G281360 PE=4 SV=1[more]
A0A1S3CFW35.1e-5287.74uncharacterized protein LOC103500427 OS=Cucumis melo OX=3656 GN=LOC103500427 PE=... [more]
A0A6J1EHJ87.1e-4683.44DNA ligase 1 OS=Cucurbita moschata OX=3662 GN=LOC111433443 PE=4 SV=1[more]
A0A6J1IUN58.4e-3982.73uncharacterized protein LOC111480750 OS=Cucurbita maxima OX=3661 GN=LOC111480750... [more]
A0A6J1DVD51.2e-2972.19uncharacterized protein LOC111023459 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
AT1G65280.14.0e-0943.33DNAJ heat shock N-terminal domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..82
NoneNo IPR availablePANTHERPTHR47422DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEINcoord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G11240.1Clc09G11240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity