Clc09G11100 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G11100
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic
Location	ClcChr09: 9837157 .. 9842919 (+)
RNA-Seq Expression	Clc09G11100
Synteny	Clc09G11100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTGATTCTTTTTTACCATTATCTTCTAGTCAGTGTGGCACCTGCTCTCTCTGCCAAAACCACACCAACAAAATTGGAGAAGCATCTTCTCTTCAATTTTGAGAACTACCCAGATCAAAATACTTCAAATTCAGTCCCTAAATTCCCTGAAAATGGCTTTGCAAACGAGTTTATCTCTTCATCGTTCACCATCTCTTTCTCCTTCTCATTCCTTCCTTCCATTTGGGTCTCTCCAGCTCAAGCCTCACAATCTCGTTCTTCAGGTGAGATTTCATGTTTTCTTCTAATGTATAATTACATTTCTCTTATAGATGATTCTGTTTTCTTTAACATACAAAATATGGGGTTGTTTGTATATTATGCTACTGAGCTTCAGTTATTGAATTCTTGTTGAAATTTGAGGAATTGGGGAAGTTGATGGCTGGAAATTCGATTTCTATTTTTGAATTCTCGTATTTTGGATAGTATATCAGTAGGTAACTATGTTTTTGCGCTTGGATTTTTGTTTTCTACATACAAAAGTGGGGTTGTTCGTATATAATGCTAGTGAGCTTTAGTGAATTCCGGTTGAAATGTGAGGAAATGGGGGAAGGTGATGGCTGGTAAGTGCATGTTTGGGAGTGATTTTGAAATTATTAAAATCACTTTTGTCGTGTTCAAAATTATCCTAAAACACGCATTTGATCACTCAAAATTAGTTTAAGGTTTAAATACTACTTTGGTCATTGTAATTTTAGTTTTTGCTCACTTTGGTCCCTCTACTTTCAAAATGTTCATTTTGGTCCCTATACTTTCAACTTTGGTTCATTTTGGTCCCTATACTTTAAAAATGTTCATTTTGGTCCATGTATTTTCAACTTTGGTTTATATTGGTACTTGAACTTAAAAAAAAAAAAGACCATTTTTATCCTTTAAAAGTGAAAATGAAGGGACCAAAATGACAACTTTTTAAAAGGATAAGAACTAAAATGAACCAAAGTTAGAAGTACAATGATTAAAATGAATATTTTTGAAGTATAGGGACCAAAATGAACCAAAACCAAAAGTATAGGGGACCAAAATGAACAATTTGAAAGTATAAGGACCAAAATGAACCAAAACCAAAAGTATAGGGACTAAAGTAGTATTTATATCTTAGTTTAACATTTAACTTTACACTTTTAAATGTAATTTTCATATCGTCAAAATTGTTTTTGAATGATCAAAAGTATATTTCAGAGTGATCTAAAGTATTTTAAAATCACTTTCAAACATGCCCTAATGGGAAATCTACTTTTGAATTCTCATATTTTGGATAATATGTCACCAGAGAAACTACGTTTTGTTCTTGGATTTCAATCATAAGTTGTTTTTGAGATGAACCGTCTGTAGTTTTATACCCAGAACTCCCAATTTATTGAAGTATGAAATGAAATCTGTTGGTCCCGTAAAGTTAGAAACTTAGTAAAGTTGACGAAGCTTTGAGGGAGTTTGAACTTATTGTCTCGGAGTTTTGATTCTGAGAAAAGCACTTTGTCTGAAAGCATTTTCTTTAAACTTTTTCCACTAAAGGTGCATTAAAGTGTTTTTAGGATTTTCAAAGTTACTTTTGATTGTTAAAATCTTGAAAAGTGTTTTCAAAGTTAATTTTGATTGTTAAAATCTTGAAAAGCTTACCAAACTCACGCTTGGAACTGTTAAGAATTGGTTGGGTCTTGAACATGGTTATGTTCCATGGTGGTCACCTACCTAAGATTTAATATCCTATGAGTTTCTTTGACACCCAAATGTTGAGTTATCTCATGAGATTAGTCAGTAAACTGACCTAGACACTCACGGATATTTAAAAAAAAAAAAAAGAGATAGAGAACATGACTGTGTTTATTTGTGTTCATTTAAGTATAAAATTGATCATTTGGTCTTGATATGTTTCAAACTTTTAGTGAAAATTGTTCTGATGCTATGTGATCCATCAAATTAGGTTCTGTATTTTGTAAAGGTTAATTCTGAAATTTTGTCCGAACAAGTTTGATATTTTAATTGTTTGTTCAACACATAATCTGTTTAGATTCAACAAGAGCCTGAAAATTATTTAATTCTTTGTTTCTTTGTGGCACTTGTTTTTATTATAGTATCAGATTCCATGTAATATCCTTTTTCTTTTTCTCCAAGCTGTTCTCTAATGGACACTTTCGCCACGTTCAATTTCTTTGAATGATATTGTTCCTATGTAGGAAATTGTGCATCATTTTGATGTACCAATTTTTCAGAACGTTAGAAAGGGCTGTAGACTTAATGTTGGGAGGTTTTCTAAACTTCAGGTATGCATTTGTTCAAAAAGCATCGACTTATTGAGTTCATATTTCTGTAACTAATAAAATTGTATTTGTTAAGGTATCTCTTGTCACAAGAATTTTCCATTATTAAAGAACAACCAGCTATCATAATTTGAATCACTGAATTTTTCTAAGCACTTCTCCGAAACCTGCCTTCTTCACCGTTGAAGCCAACTTGTGTCCTCAAATAGTTTTCTCAAGACTACTTATACTTACCTCCAAATCATTTGCCTTGATTATTTGAAAAAATATACCCCTTAATTAGACAATTCCTTTTTCTTGTTTGGCCCCTCCTATTCCAACATAAAACGTGGCCCAACCCTTTCTTTCTTACAAGTTACTCCTTTTTTCTTTCGTTGACTCTTTCGACACCAATGCTTTTTCTACTGACCCCCCTCTCTTCCAAACAGCCATGCACTCTCGGTGATTTTTCCTTCCTTGAGCTTGCGTATGCACCCTTATTACACACCTCTTTGCTTTTCCTCTGCCATATCAGTATTCTTAATCCTTTTATTATCCTTATCCAAATTATTTGTAACATTCTTCCTACTGAAATACTCCTTAATCCACCCCATTCTCTTAATGTCCGATGGATGGGGTCCCTTGATTTTATCATCTAATTTTGAAGTTTCCTCCTTTTACACGCCATGGACTTTCCACCCTTTTCTAGCCAGCAAATTTTCTTGAATACGGCACCACCGTCTTGCATTGCTCCATTTCTTTCTGCTGCTGTAATCGCAATTTCACAATGAGTGAATCTACAGAAATTCTTTTCTACTTCCAAACAATCTTCCAATTGTTAGGTCTTCTATGCCCACTGTAAGAGTCTCCCACAATCATCTTCAAGGAATCTTAGAACTTCCTCCTTCCCCAAGTTTATGGCTGAAAAATTCACTTTTTATCCACCCCCTGCCACATTCCTCACTTTTGAAATTCTCAATAAATGTTGGAAACTCTTAATTGATTTTTGCTATTTTTGTTACTATACAAAATGGGCTATATTTAAAAAGTTGTGTACAAATTTTCCATTTTTGAAATCGACTTAAATTTACATAAGGTGATATACTTTCTTCCATTGAATTGAAAATTCTTCAAATTGTATCATTATTAACTTCTTTTTTTTTTTTTTTTTTTTTTCCTACACTGGATGAAGGCAGATGTTTCAAAGGGAATTGGCAATGGAATCTCAATCATCGACAATGTTTGAGAGTAATTTGTTATCTGATTCAACATTCTTTATAAGCCAATCATTTTCATTAATTTTGTGGCTGATATCTTTCAAGTGATCTGTAGGTTATGACTTAAGTTCAAAATATAGACATGTTTATTCACAATTTTAACAATACCTCTTTAAACTAGATTTGATACATAAATTATTAAAGGGTTGCTTTCAAATATAACAAAATGAATCAAAATATTTACAAATTTAGAAATATGTACTAATAGGCAGTGATAGACATTGATAGACTATTATCGTCTATCACTGTCTATCGACAATGACATTTTGCTATATTTGAAAATATTTCTAGCAGTTTTACTATTTAAAACAATTACCCATTGTTAAACTATATTCATACATACAATGCAAGATATGTCAAACTAGATTCAACACATACGTCATTAAACTAGGTAAATCAGTAGTAAGAACAAAGGATTGAAATTGTAGTAAAATATAAAAGGTAAAGAAATACCATGGCTCTCAAAGTATGTTTGAACTTAAACCAACTAAGCCAATGTCTACCTTCATCTCCGCCTACATGGAATAGTATACTCTTAATACTCTGATAATATTTCTAGCTCCATATAATGGTACTCCTAACCTTCAACCACAATGGTTTGAAACATTGACCTCCAATGTATTCATGTTCTCAACAAAAACAACTCAATTTGAGATTATCACATCCACAGTTTTTAACCTGCATGCACTTTATTTTCCATGAAACTATTCCGAATTTATGAATTTGAGATCTTTTAGACTAACGTTTGTTATTCACTTGAAAGAAGTATAATATATATAAAAAGGATAATTGGCTCTTAAATTTATTAATTTAATATTTTTTGTGGTGAATGTTTGAAGAGCATTTTCTCATTTTTGCAGATTATCGACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCTGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAATGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTGTCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTAGATCTTTCTGCTAAAGAACTGCAAGTAAGAGTCCACATTTACAGACCATGTAATTTGATGGGTAAACTGTTGGTTCAAACTTGGGATACCTGTATCCCAAGTCTCTGAAAACCCCATGAACTTATGTATTTGAAACTGTTAGTATAAACTGAGCTTTTAAATATGTATTTGAAATCACCTCCTTGAAGCTGGTGATTTGCGGAAGACATCGATAGTCTAGCTTTTCTAACGCGATTTCCCTCCATATTATTTGTTGGACAGGAACAAGTGAGAAGCGGTGATGCCAGTGCTACGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATCGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTATTACTGTCCAGCTCACTGATTTCTGAATCTTAGAATATCAGGAGCATCCTATCATATAATATAAAATTTGATTCTCTGCTTTGCTTTCCTTGATTTTAATCGAAAGTGAATGGGTGATTATTGATTATCATGTAAATGTATCAAGAACACGCTTCCTGGTTCCTCATGTCGAGCTTTTCAAAACCTGTTGTTCTCTATCTCTTCATCAAGTTTCATATTTTCAGGAGTGTTCTACTTGGAAACTAGTTAACTTTTCCAGACAAACTGAATTCTGTGTGTTCTCCATCGCAATTCATTGAGCAAATTTCCATGAAAATAAATGGGAGCCAAGCACTTGTTGACTTGTTAAGTAGATCGAGAGTCGATATTTAATGAGCCCATCTTTATTGTTTCTATCATCTATGTTTGCAGGTTTACAACGCGCTTGGGGTTAGTTATGTGCGCGACGATAAGCTTGACAAGGGAATTGCCCAGTTCGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCATTGAAGGAGCGTGTGGAGATGTACAAGGGAGTTCCAGTGAAATCTAAGAACAGATGA

mRNA sequence

ATGAATTTGATTCTTTTTTACCATTATCTTCTAGTCAGTGTGGCACCTGCTCTCTCTGCCAAAACCACACCAACAAAATTGGAGAAGCATCTTCTCTTCAATTTTGAGAACTACCCAGATCAAAATACTTCAAATTCAGTCCCTAAATTCCCTGAAAATGGCTTTGCAAACGAGTTTATCTCTTCATCGTTCACCATCTCTTTCTCCTTCTCATTCCTTCCTTCCATTTGGGTCTCTCCAGCTCAAGCCTCACAATCTCGTTCTTCAGATTATCGACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCTGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAATGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTGTCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTAGATCTTTCTGCTAAAGAACTGCAAGAACAAGTGAGAAGCGGTGATGCCAGTGCTACGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATCGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTACAACGCGCTTGGGGTTAGTTATGTGCGCGACGATAAGCTTGACAAGGGAATTGCCCAGTTCGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCATTGAAGGAGCGTGTGGAGATGTACAAGGGAGTTCCAGTGAAATCTAAGAACAGATGA

Coding sequence (CDS)

ATGAATTTGATTCTTTTTTACCATTATCTTCTAGTCAGTGTGGCACCTGCTCTCTCTGCCAAAACCACACCAACAAAATTGGAGAAGCATCTTCTCTTCAATTTTGAGAACTACCCAGATCAAAATACTTCAAATTCAGTCCCTAAATTCCCTGAAAATGGCTTTGCAAACGAGTTTATCTCTTCATCGTTCACCATCTCTTTCTCCTTCTCATTCCTTCCTTCCATTTGGGTCTCTCCAGCTCAAGCCTCACAATCTCGTTCTTCAGATTATCGACCAGAAAAAGGCCTAGCATTATTTGTATCTGCTTTCTCATCAGGGCAATCTTTATGGCTGGTTTCTGCTGAAGCAGCATTTGCTAGGGAAGACATGAAAATGAATACAGTTTACGAGATTGGGGAGTTATTTGAATTAGGAATACAGCTGTCTTATCTATTATTACTATTAGGTCTTCTTGGGGTTGGAACCTTCTTTGTCATACGTCAAGTTCTTGTTCGTAGAGAACTAGATCTTTCTGCTAAAGAACTGCAAGAACAAGTGAGAAGCGGTGATGCCAGTGCTACGGAATATTTTGAACTTGGTGCAGTTATGCTGAGGAGGAAGTTTTATCCTGCTGCCACAAAGTATTTGCTTCAGGCAATCGATAAGTGGGACGGGGACGATCAAGATCTTGCGCAGGTTTACAACGCGCTTGGGGTTAGTTATGTGCGCGACGATAAGCTTGACAAGGGAATTGCCCAGTTCGAAACTGCTGTGAAGCTTCAACCTGGATATGTTACAGCTTGGAACAATCTTGGAGATGCATATGAGAAAAAGAAAGAATACAAGTCAGCTCTGAAAGCTTTCGAAGAAGTTCTTCTTTTCGATCCGAACAACAAGCTTGCTCGGCCAAGACGAGATGCATTGAAGGAGCGTGTGGAGATGTACAAGGGAGTTCCAGTGAAATCTAAGAACAGATGA

Protein sequence

MNLILFYHYLLVSVAPALSAKTTPTKLEKHLLFNFENYPDQNTSNSVPKFPENGFANEFISSSFTISFSFSFLPSIWVSPAQASQSRSSDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR

Homology

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BLAST of Clc09G11100 vs. NCBI nr
Match: XP_038898984.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-117
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 81  AQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFEL 140
           A  SQS +   + +PEKGLALFVSAFSSGQSLWL+SAEAAFAREDMK N VYEIGELFEL
Sbjct: 77  AMESQSSTMFENSQPEKGLALFVSAFSSGQSLWLISAEAAFAREDMKTNAVYEIGELFEL 136

Query: 141 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 200
           GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVML
Sbjct: 137 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVML 196

Query: 201 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 260
           RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY
Sbjct: 197 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 256

Query: 261 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 320
           VTAWNNLGDAYEKKKEYK+ALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN
Sbjct: 257 VTAWNNLGDAYEKKKEYKAALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 316

[Close]

BLAST of Clc09G11100 vs. NCBI nr
Match: XP_038898985.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-117
Identity = 226/241 (93.78%), Postives = 231/241 (95.85%), Query Frame = 0


Query: 81  AQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFEL 140
           A  SQS +   + +PEKGLALFVSAFSSGQSLWL+SAEAAFAREDMK N VYEIGELFEL
Sbjct: 33  AMESQSSTMFENSQPEKGLALFVSAFSSGQSLWLISAEAAFAREDMKTNAVYEIGELFEL 92

Query: 141 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 200
           GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVML
Sbjct: 93  GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVML 152

Query: 201 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 260
           RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY
Sbjct: 153 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 212

Query: 261 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 320
           VTAWNNLGDAYEKKKEYK+ALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN
Sbjct: 213 VTAWNNLGDAYEKKKEYKAALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 272

[Close]

BLAST of Clc09G11100 vs. NCBI nr
Match: XP_008461470.1 (PREDICTED: uncharacterized protein ycf37 isoform X2 [Cucumis melo])

HSP 1 Score: 431.4 bits (1108), Expect = 6.7e-117
Identity = 226/241 (93.78%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 81  AQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFEL 140
           A  SQS +   +  P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMK NTVYEIGELFEL
Sbjct: 17  AMESQSSTMFENCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFEL 76

Query: 141 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 200
           GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVML
Sbjct: 77  GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVML 136

Query: 201 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 260
           RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY
Sbjct: 137 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 196

Query: 261 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 320
           VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKN
Sbjct: 197 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKN 256

[Close]

BLAST of Clc09G11100 vs. NCBI nr
Match: XP_008461469.1 (PREDICTED: uncharacterized protein ycf37 isoform X1 [Cucumis melo] >KAA0061283.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa] >TYK09862.1 Tetratricopeptide-like helical [Cucumis melo var. makuwa])

HSP 1 Score: 431.0 bits (1107), Expect = 8.8e-117
Identity = 229/252 (90.87%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 70  FSFLPSIWVSPAQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMN 129
           FS L       A  SQS +   +  P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMK N
Sbjct: 62  FSKLQMFQRELAMESQSSTMFENCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTN 121

Query: 130 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 189
           TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA
Sbjct: 122 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 181

Query: 190 TEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 249
            EYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ
Sbjct: 182 MEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 241

Query: 250 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVE 309
           FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+
Sbjct: 242 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVD 301

Query: 310 MYKGVPVKSKNR 320
           MYKGVPVKSKNR
Sbjct: 302 MYKGVPVKSKNR 313

[Close]

BLAST of Clc09G11100 vs. NCBI nr
Match: XP_011659092.1 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X2 [Cucumis sativus] >KAE8646164.1 hypothetical protein Csa_015953 [Cucumis sativus])

HSP 1 Score: 426.8 bits (1096), Expect = 1.7e-115
Identity = 223/241 (92.53%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 81  AQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFEL 140
           A  SQS +   + +P+KGLALF+SAFSSGQSLWLVSAEAA A EDMK NTVYEIGELFEL
Sbjct: 17  AMESQSSAMFENCQPQKGLALFLSAFSSGQSLWLVSAEAALAGEDMKTNTVYEIGELFEL 76

Query: 141 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 200
           GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVML
Sbjct: 77  GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVML 136

Query: 201 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 260
           RRKFYPAATK+LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY
Sbjct: 137 RRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 196

Query: 261 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 320
           VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKN
Sbjct: 197 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKN 256

[Close]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot
Match: B9DHG0 (Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PYG7 PE=1 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.4e-93
Identity = 185/228 (81.14%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 95  KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGLL 154
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 74  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 133

Query: 155 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQ 214
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASATE FELGAVMLRRKFYPAA K+L Q
Sbjct: 134 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 193

Query: 215 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 274
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 194 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 253

Query: 275 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 320
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 254 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 301

[Close]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot
Match: C0PEY7 (Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Zea mays OX=4577 GN=PYG7 PE=2 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 8.6e-91
Identity = 179/249 (71.89%), Postives = 199/249 (79.92%), Query Frame = 0


Query: 77  WVSPAQASQSRSSDYRPEK------GLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVY 136
           WV  A  +    S + P K       L L  SA       WL +A+ A +    K+N VY
Sbjct: 73  WVVFASENVQEISSHLPRKDERRSGNLLLRFSALPYCTMAWLSTAQLAQSSVGEKLNMVY 132

Query: 137 EIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEY 196
           E+GELFELGIQLSYLL+L+GLLG GTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEY
Sbjct: 133 EVGELFELGIQLSYLLILIGLLGAGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEY 192

Query: 197 FELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFET 256
           FELGAVMLRRKFYPAA KYL QAIDKWD D+QDLAQVYNALGVSY R++KLDK I QF+ 
Sbjct: 193 FELGAVMLRRKFYPAAIKYLQQAIDKWDRDEQDLAQVYNALGVSYKRENKLDKAIQQFQK 252

Query: 257 AVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYK 316
           AV+LQPGYVTAWNNLGDAYE++K+ KSALKAFEEVLLFDPNNK+ARPR D L+ RV MYK
Sbjct: 253 AVELQPGYVTAWNNLGDAYEQQKDLKSALKAFEEVLLFDPNNKVARPRVDDLRPRVSMYK 312

Query: 317 GVPVKSKNR 320
           GVPVKS+ R
Sbjct: 313 GVPVKSEKR 321

[Close]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot
Match: O78458 (Uncharacterized protein ycf37 OS=Guillardia theta OX=55529 GN=ycf37 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.8e-16
Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 135 LFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELG 194
           L+  G+ L  L +L+        F+I Q+  RR  DL    +QE++R+  A   +++ELG
Sbjct: 8   LYVSGLSLILLFILV--------FIISQIWSRRTADLRLVSIQEKIRNAKADGKDFYELG 67

Query: 195 AVMLRRKFYPAATKYLLQAIDKWDGDDQ-DLAQVYNALGVSYVRDDKLDKGIAQFETAVK 254
            + L +K Y  A      A++ W+ DD+  LA +YN +G +Y +  + D  +  +E A+ 
Sbjct: 68  VIFLSKKLYDQAIINFRYALNLWELDDKTGLANLYNTIGFTYTQIAQYDLALFYYEKALL 127

Query: 255 LQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV 307
            +P Y+    N+G  YEK      A   + ++L +D +NK A  + + L  R+
Sbjct: 128 HEPNYLVTLKNIGFIYEKTNNLVKAKDIYLQILKYDVDNKFATDKLNLLTGRL 172

[Close]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot
Match: P48277 (Uncharacterized protein ycf37 OS=Cyanophora paradoxa OX=2762 GN=ycf37 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 9.4e-13
Identity = 43/163 (26.38%), Postives = 87/163 (53.37%), Query Frame = 0


Query: 144 YLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFY 203
           + L++L L+     F+I+++   R LDL    L++++    A+  +Y  L ++ +++K Y
Sbjct: 13  FSLIVLALIS----FLIQEIQKSRFLDLEITRLRKKIYQEKATEKDYNNLASIYIKKKLY 72

Query: 204 PAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWN 263
             A K  L+ ++  + D   LA +YN+LG      ++ +  I  ++ A+   P ++ A  
Sbjct: 73  SQAQKEFLKILENKNLDKSQLALIYNSLGYICSAQEQYELAIEYYKKALFYIPDFILARI 132

Query: 264 NLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV 307
           NL   +E K     A+  ++EVL+FDP N+LA+ +   ++  +
Sbjct: 133 NLARIFELKNLKTEAINMYQEVLIFDPKNQLAKRKLSIIENLI 171

[Close]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot
Match: Q1XDU6 (Uncharacterized protein ycf37 OS=Pyropia yezoensis OX=2788 GN=ycf37 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.7e-07
Identity = 42/168 (25.00%), Postives = 77/168 (45.83%), Query Frame = 0


Query: 138 LGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 197
           L + + YL +L   L +  + + +Q+     L+   K   ++ ++      E F    V 
Sbjct: 3   LALPIFYLSILTIFLLILNWLIFQQLKTILLLESQFKYFVDKSQNRKLEPDESFAFAKVC 62

Query: 198 LRRKFYPAATKYLLQAIDKWD-----GDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAV 257
           + +K++  A      A+  +       ++  +A +YN LG  Y    +       +E A+
Sbjct: 63  VAKKYFSKAIIEGQLALKNYRDLNILDNNIVIANLYNMLGFIYFEAGQTSFAKNFYEQAL 122

Query: 258 KLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRD 301
           ++ P YV A NNL   YE+ K+ K A   +++VL  + NNK A  R+D
Sbjct: 123 QINPNYVVALNNLAKIYEEVKDLKKAESLYDKVLTLNLNNKTANRRKD 170

[Close]

BLAST of Clc09G11100 vs. ExPASy TrEMBL
Match: A0A1S3CET8 (uncharacterized protein ycf37 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500057 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 3.3e-117
Identity = 226/241 (93.78%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 81  AQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFEL 140
           A  SQS +   +  P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMK NTVYEIGELFEL
Sbjct: 17  AMESQSSTMFENCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTNTVYEIGELFEL 76

Query: 141 GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 200
           GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVML
Sbjct: 77  GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVML 136

Query: 201 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 260
           RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY
Sbjct: 137 RRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGY 196

Query: 261 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKN 320
           VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+MYKGVPVKSKN
Sbjct: 197 VTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVDMYKGVPVKSKN 256

[Close]

BLAST of Clc09G11100 vs. ExPASy TrEMBL
Match: A0A5A7UZ94 (Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00310 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.3e-117
Identity = 229/252 (90.87%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 70  FSFLPSIWVSPAQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMN 129
           FS L       A  SQS +   +  P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMK N
Sbjct: 62  FSKLQMFQRELAMESQSSTMFENCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTN 121

Query: 130 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 189
           TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA
Sbjct: 122 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 181

Query: 190 TEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 249
            EYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ
Sbjct: 182 MEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 241

Query: 250 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVE 309
           FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+
Sbjct: 242 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVD 301

Query: 310 MYKGVPVKSKNR 320
           MYKGVPVKSKNR
Sbjct: 302 MYKGVPVKSKNR 313

[Close]

BLAST of Clc09G11100 vs. ExPASy TrEMBL
Match: A0A1S3CEI5 (uncharacterized protein ycf37 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500057 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.3e-117
Identity = 229/252 (90.87%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 70  FSFLPSIWVSPAQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMN 129
           FS L       A  SQS +   +  P+KGLALFVSAFSSGQSLWLVSAEAAFA EDMK N
Sbjct: 62  FSKLQMFQRELAMESQSSTMFENCEPQKGLALFVSAFSSGQSLWLVSAEAAFAGEDMKTN 121

Query: 130 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 189
           TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA
Sbjct: 122 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 181

Query: 190 TEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 249
            EYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ
Sbjct: 182 MEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 241

Query: 250 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVE 309
           FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+
Sbjct: 242 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVD 301

Query: 310 MYKGVPVKSKNR 320
           MYKGVPVKSKNR
Sbjct: 302 MYKGVPVKSKNR 313

[Close]

BLAST of Clc09G11100 vs. ExPASy TrEMBL
Match: A0A0A0K4L3 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G284440 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 1.0e-115
Identity = 226/252 (89.68%), Postives = 233/252 (92.46%), Query Frame = 0


Query: 70  FSFLPSIWVSPAQASQSRS--SDYRPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMN 129
           FS L       A  SQS +   + +P+KGLALF+SAFSSGQSLWLVSAEAA A EDMK N
Sbjct: 62  FSKLQMFQRELAMESQSSAMFENCQPQKGLALFLSAFSSGQSLWLVSAEAALAGEDMKTN 121

Query: 130 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 189
           TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA
Sbjct: 122 TVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA 181

Query: 190 TEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 249
            EYFELGAVMLRRKFYPAATK+LLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ
Sbjct: 182 MEYFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQ 241

Query: 250 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVE 309
           FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERV+
Sbjct: 242 FETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVD 301

Query: 310 MYKGVPVKSKNR 320
           MYKGVPVKSKNR
Sbjct: 302 MYKGVPVKSKNR 313

[Close]

BLAST of Clc09G11100 vs. ExPASy TrEMBL
Match: A0A6J1DWQ6 (tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024774 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.6e-114
Identity = 214/228 (93.86%), Postives = 222/228 (97.37%), Query Frame = 0


Query: 92  RPEKGLALFVSAFSSGQSLWLVSAEAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGL 151
           +PEKGL +FVSAFSSGQ LWL+SAEAAFARED++ N V+EIGELFELGIQLSYLLLLLGL
Sbjct: 13  QPEKGLGVFVSAFSSGQFLWLISAEAAFAREDIRTNAVFEIGELFELGIQLSYLLLLLGL 72

Query: 152 LGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLL 211
           LGVGTFFV+RQVLVRRELDLSAKELQEQVRSGDASA EYFELGAVMLRRKFYPAATK+LL
Sbjct: 73  LGVGTFFVVRQVLVRRELDLSAKELQEQVRSGDASAMEYFELGAVMLRRKFYPAATKFLL 132

Query: 212 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEK 271
           QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGI QFETAVKLQPGYVTAWNNLGDAYEK
Sbjct: 133 QAIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGITQFETAVKLQPGYVTAWNNLGDAYEK 192

Query: 272 KKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 320
           KKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR
Sbjct: 193 KKEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKGVPVKSKNR 240

[Close]

BLAST of Clc09G11100 vs. TAIR 10
Match: AT1G22700.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94
Identity = 185/228 (81.14%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 95  KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGLL 154
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 74  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 133

Query: 155 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQ 214
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASATE FELGAVMLRRKFYPAA K+L Q
Sbjct: 134 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 193

Query: 215 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 274
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 194 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 253

Query: 275 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 320
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 254 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 301

[Close]

BLAST of Clc09G11100 vs. TAIR 10
Match: AT1G22700.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 342.4 bits (877), Expect = 3.8e-94
Identity = 185/228 (81.14%), Postives = 198/228 (86.84%), Query Frame = 0


Query: 95  KGLALFVSAFSSGQSLWLVSA--EAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGLL 154
           K L +  S F  GQSL +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLL
Sbjct: 69  KKLPIKGSTFLLGQSLLMVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLL 128

Query: 155 GVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQ 214
           GVGTF+VIRQVLVRRELDLSAKELQEQVRSGDASATE FELGAVMLRRKFYPAA K+L Q
Sbjct: 129 GVGTFYVIRQVLVRRELDLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQ 188

Query: 215 AIDKWDGDDQDLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKK 274
           AI KWDGDDQDLAQVYNALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKK
Sbjct: 189 AIQKWDGDDQDLAQVYNALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKK 248

Query: 275 KEYKSALKAFEEVLLFDPNNKLARPRRDALKERVEMYKG-VPVKSKNR 320
           KE   AL AFEEVLLFDPNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 249 KELPLALNAFEEVLLFDPNNKVARPRRDALKDRVKLYKGVVAVKSKKR 296

[Close]

BLAST of Clc09G11100 vs. TAIR 10
Match: AT1G22700.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-91
Identity = 177/211 (83.89%), Postives = 189/211 (89.57%), Query Frame = 0


Query: 112 LVSA--EAAFAREDMKMNTVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRREL 171
           +VSA  + A A E +K   +YE+GELFEL IQLSYLLLLLGLLGVGTF+VIRQVLVRREL
Sbjct: 1   MVSAHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYVIRQVLVRREL 60

Query: 172 DLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIDKWDGDDQDLAQVYN 231
           DLSAKELQEQVRSGDASATE FELGAVMLRRKFYPAA K+L QAI KWDGDDQDLAQVYN
Sbjct: 61  DLSAKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYN 120

Query: 232 ALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEEVLLFD 291
           ALGVSYVR+DKLDKGIAQFE AVKLQPGYVTAWNNLGDAYEKKKE   AL AFEEVLLFD
Sbjct: 121 ALGVSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFD 180

Query: 292 PNNKLARPRRDALKERVEMYKG-VPVKSKNR 320
           PNNK+ARPRRDALK+RV++YKG V VKSK R
Sbjct: 181 PNNKVARPRRDALKDRVKLYKGVVAVKSKKR 211

[Close]

BLAST of Clc09G11100 vs. TAIR 10
Match: AT3G11540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-07
Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = 0


Query: 223 DLAQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAF 282
           + AQ  N LGV Y    K+D   +  E A+   P Y  A+NNLG  Y        A+ A+
Sbjct: 361 NFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAY 420

Query: 283 EEVLLFDPNNKLARPRR 300
           EE L  DP+++ A   R
Sbjct: 421 EECLKIDPDSRNAGQNR 437

[Close]

BLAST of Clc09G11100 vs. TAIR 10
Match: AT5G56290.1 (peroxin 5 )

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05
Identity = 22/67 (32.84%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 225 AQVYNALGVSYVRDDKLDKGIAQFETAVKLQPGYVTAWNNLGDAYEKKKEYKSALKAFEE 284
           A V+  LGV Y    + D+ I  F+TA++L+P   + WN LG       +   A+ A+++
Sbjct: 590 ADVHIVLGVLYNLSREFDRAITSFQTALQLKPNDYSLWNKLGATQANSVQSADAISAYQQ 649

Query: 285 VLLFDPN 292
            L   PN
Sbjct: 650 ALDLKPN 656

The following BLAST results are available for this feature:

BLAST of Clc09G11100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898984.1	1.8e-117	93.78	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]
XP_038898985.1	1.8e-117	93.78	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]
XP_008461470.1	6.7e-117	93.78	PREDICTED: uncharacterized protein ycf37 isoform X2 [Cucumis melo]	[more]
XP_008461469.1	8.8e-117	90.87	PREDICTED: uncharacterized protein ycf37 isoform X1 [Cucumis melo] >KAA0061283.1...	[more]
XP_011659092.1	1.7e-115	92.53	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic isoform X...	[more]

BLAST of Clc09G11100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DHG0	5.4e-93	81.14	Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Arabid...	[more]
C0PEY7	8.6e-91	71.89	Tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Zea ma...	[more]
O78458	1.8e-16	29.48	Uncharacterized protein ycf37 OS=Guillardia theta OX=55529 GN=ycf37 PE=3 SV=1	[more]
P48277	9.4e-13	26.38	Uncharacterized protein ycf37 OS=Cyanophora paradoxa OX=2762 GN=ycf37 PE=3 SV=1	[more]
Q1XDU6	7.7e-07	25.00	Uncharacterized protein ycf37 OS=Pyropia yezoensis OX=2788 GN=ycf37 PE=3 SV=1	[more]

BLAST of Clc09G11100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CET8	3.3e-117	93.78	uncharacterized protein ycf37 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500057...	[more]
A0A5A7UZ94	4.3e-117	90.87	Tetratricopeptide-like helical OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CEI5	4.3e-117	90.87	uncharacterized protein ycf37 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500057...	[more]
A0A0A0K4L3	1.0e-115	89.68	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G284440 ...	[more]
A0A6J1DWQ6	2.6e-114	93.86	tetratricopeptide repeat domain-containing protein PYG7, chloroplastic OS=Momord...	[more]

BLAST of Clc09G11100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22700.1	3.8e-94	81.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22700.2	3.8e-94	81.14	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G22700.3	1.8e-91	83.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G11540.1	4.6e-07	36.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G56290.1	1.5e-05	32.84	peroxin 5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 225..258 e-value: 0.088 score: 21.9 coord: 187..220 e-value: 340.0 score: 1.6 coord: 259..292 e-value: 1.1E-7 score: 41.5
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 259..292 score: 13.2754
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 225..258 score: 10.6204
IPR001440	Tetratricopeptide repeat 1	PFAM	PF00515	TPR_1	coord: 261..292 e-value: 4.6E-9 score: 35.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 166..313 e-value: 1.5E-23 score: 85.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 186..299
None	No IPR available	PFAM	PF13432	TPR_16	coord: 198..257 e-value: 0.0015 score: 19.2
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 67..312
None	No IPR available	PANTHER	PTHR26312:SF177	TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN PYG7, CHLOROPLASTIC	coord: 67..312
None	No IPR available	PROSITE	PS50293	TPR_REGION	coord: 259..292 score: 10.170074

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G11100.2	Clc09G11100.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity