Clc09G09890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G09890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr09: 8489852 .. 8491886 (+)
RNA-Seq Expression	Clc09G09890
Synteny	Clc09G09890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCATCCACAAGAGCTACATTATCTTGCTTGTAATATCCATTTCTTTGAGCACAGAACTAACACAAGTGAGCGATGCAATTTTCAACAAATATTACGTTCGCATCATCATCAATGGCTTCAATAACGCAACGATTGGAGTTCATTGCAAGTCGAAAGACAACGATCTCAATAACCACTTCATCCCAATATGGGGTGACTACCAGTAGCATTTTCGAACAAACTTGTTCGGGACGACGCTGTTCTATTGCCATATTTGGTGGATTGAAGGGCACATTACCTATCAGGCCTATTGGCATGAGGACAACTTTGAGAGAGATGCATGTGGAGTTGGACATTGCAGATGGAAGGTAGATGCTCAAGGAATTTCAAGTTTCAGTGTTGGCCAAAATGTGTATCAATTAAAATTCAAATGGGAGCATTGAACAAAAGCCTCATACTAAATAATTAAGATGGAGGCTCTTCAAGGATAGATGTTATCTGGAATGCTCCTAAGTATTTTTCTATAAATATGAAGGCCACATTTCATCATTACTCTTTAATTTAGTTTTTAAGTTTCGAAGTCTATGTTTTCTTTCAATTTTTTACGTTGGTTTTTCATCCTTCCATTCTTAAAGAAATATTTGAGTTCATTAGCCAAAATCCAAAAAAAGAACAAAAGAAAAAACAAAAGAAAATTTCTTAAATATTATTTCTTTTAGTTTTCAAAACTCTAACTTACCATATTGAAAATAGAATTTTGAAAACATTACTAAAATAATAGTGGATAGCGAAACAAAAATTAAACACATACCCTAAGATTTTAAGGGATTGTTTGGAACAATGAGTTTGAGTTATGGAGTCTAAAGTTAATATGTTGGAGTTAGGAAATATATGCGTTTGAGATGCAAAGTTGTTGAGGCTAGAGGTTAGGAAAGAGTAGAGACAAAAAGAGAGGAAACGAGGAATTAGATAGAGTTCATCGATAAATGTGCAAACTTCAATAGTAAATATTGTTAAAGTTGGTGGAGTTGACTTATATATCTTACACCAACTTATGAAGTTAGTAGGCCAAACACCCCTATAAAGTTAAAAACCGAAAGATTGTACTAAAATTTAAATTATAAAATTAATTTTCCCCAACTACCGAACTTTTAGCTTCATCCTTGATGTATCATATCCATTTTTTGTTTCTTTCTTTCTTTGATAATTTTCACAATCATCTTTCTGGTTTATAGAATAAAAATCATACCAATATGAGCATAGCTAAGCTTCTTTAAAAATGGTAGATCCGAATCACAACAAACCTCTAATTCTCATGTGTCGCAATAAATAATATAATAACAACAATAACAAATAATCAACTTTAACTATAGATGTTCATGAAATAAAAGCATTAGTGCATTCATCTTAATTATACCATGCACATGCATAACATTCAATGACGAATCACAAATATTTTTTAACACAATATAAAGAAGTAGATTTCTCACATCATCACCAATTCATCACTATAAAAACACAACAAAATAGGAGAGAACATGAATAATCAATTACATCAAAATTATAGCACAAAAGAAAATGCCCAATCATCACTCTTCCAAATACAAAATTATTTATTCACTTCTTCTTCTCCTCTCACAGACCTTTACTCTTCCATCGCTGTGTTTAGAAACCAAAGAAAATGTCTTCCCCGCCTTCATCCGATGGCATGTGACCGTCATCAATGGCTTAAACGGCACCATAGCGATGTCAGTTCATTGTCAGTCGCAGGACGATGATCTCGGCCTCCAGACCCTCCCACCGACCGCCAATGTCTCGTGGAGTTTTCAGGCCAATTTCTTCCATTCCACACTTTTCTGGTGCCACCTTCAAAAAGGCGGTGGGGGTGGAGATGGCGGCTGTAGGGCAGCGTTTAAGGTGTTTTGGCACGATGGGCGACTGTTCGAGAAGTGTGGTTGGAAAAACTGCATTTGGATCGCTAAAGATGACGGTATTTACATTAGAAACTTTGCCCAGGGTACTGACCAACTTTGTTATTTATGGGAAGGTTGA

mRNA sequence

ATGGGCATCCACAAGAGCTACATTATCTTGCTTGTAATATCCATTTCTTTGAGCACAGAACTAACACAAGTGAGCGATGCAATTTTCAACAAATATTACGTTCGCATCATCATCAATGGCTTCAATAACGCAACGATTGGAGTTCATTGCAAGTCGAAAGACAACGATCTCAATAACCACTTCATCCCAATATGGGGGCACATTACCTATCAGGCCTATTGGCATGAGGACAACTTTGAGAGAGATGCATGTGGAGTTGGACATTGCAGATGGAAGACCTTTACTCTTCCATCGCTGTGTTTAGAAACCAAAGAAAATGTCTTCCCCGCCTTCATCCGATGGCATGTGACCGTCATCAATGGCTTAAACGGCACCATAGCGATGTCAGTTCATTGTCAGTCGCAGGACGATGATCTCGGCCTCCAGACCCTCCCACCGACCGCCAATGTCTCGTGGAGTTTTCAGGCCAATTTCTTCCATTCCACACTTTTCTGGTGCCACCTTCAAAAAGGCGGTGGGGGTGGAGATGGCGGCTGTAGGGCAGCGTTTAAGGTGTTTTGGCACGATGGGCGACTGTTCGAGAAGTGTGGTTGGAAAAACTGCATTTGGATCGCTAAAGATGACGGTATTTACATTAGAAACTTTGCCCAGGGTACTGACCAACTTTGTTATTTATGGGAAGGTTGA

Coding sequence (CDS)

ATGGGCATCCACAAGAGCTACATTATCTTGCTTGTAATATCCATTTCTTTGAGCACAGAACTAACACAAGTGAGCGATGCAATTTTCAACAAATATTACGTTCGCATCATCATCAATGGCTTCAATAACGCAACGATTGGAGTTCATTGCAAGTCGAAAGACAACGATCTCAATAACCACTTCATCCCAATATGGGGGCACATTACCTATCAGGCCTATTGGCATGAGGACAACTTTGAGAGAGATGCATGTGGAGTTGGACATTGCAGATGGAAGACCTTTACTCTTCCATCGCTGTGTTTAGAAACCAAAGAAAATGTCTTCCCCGCCTTCATCCGATGGCATGTGACCGTCATCAATGGCTTAAACGGCACCATAGCGATGTCAGTTCATTGTCAGTCGCAGGACGATGATCTCGGCCTCCAGACCCTCCCACCGACCGCCAATGTCTCGTGGAGTTTTCAGGCCAATTTCTTCCATTCCACACTTTTCTGGTGCCACCTTCAAAAAGGCGGTGGGGGTGGAGATGGCGGCTGTAGGGCAGCGTTTAAGGTGTTTTGGCACGATGGGCGACTGTTCGAGAAGTGTGGTTGGAAAAACTGCATTTGGATCGCTAAAGATGACGGTATTTACATTAGAAACTTTGCCCAGGGTACTGACCAACTTTGTTATTTATGGGAAGGTTGA

Protein sequence

MGIHKSYIILLVISISLSTELTQVSDAIFNKYYVRIIINGFNNATIGVHCKSKDNDLNNHFIPIWGHITYQAYWHEDNFERDACGVGHCRWKTFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQLCYLWEG

Homology

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BLAST of Clc09G09890 vs. NCBI nr
Match: KAE8646226.1 (hypothetical protein Csa_016670 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 4.1e-100
Identity = 181/275 (65.82%), Postives = 200/275 (72.73%), Query Frame = 0


Query: 1   MGIHKSYIILLVISISLSTELTQVSDAIFNKYYVRIIINGFNNATIGVHCKSKDNDLNNH 60
           MGI KSYIILLVISI+LS ELTQVS A+F K+YV  IINGF+NATIG HC+SKD+DL N 
Sbjct: 1   MGIRKSYIILLVISIALSAELTQVSSALFEKFYVH-IINGFDNATIGAHCRSKDDDLGNQ 60

Query: 61  FIPI-----------------------W--GHITYQAYWHEDNFERDACGVGHCR----- 120
           FIP+                       W  GHITY+AYWHE++FE   CG GHCR     
Sbjct: 61  FIPVNAEFHWNFRTNFLGTTLFYCHVWWIGGHITYKAYWHENDFELSRCGDGHCRWKADP 120

Query: 121 -----------------WKTFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQ 180
                            WKT TLPSLCLETK+NVFPAFIRWHVTVIN LN +  M VHC+
Sbjct: 121 QGVSSYFVDQKRISPNSWKTLTLPSLCLETKDNVFPAFIRWHVTVINRLNASKGMLVHCR 180

Query: 181 SQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLF 229
           SQDDDLGLQTLPPTAN++WSF+ANFFHSTLFWC LQKGGGGG G  RAAFKVFWHD RLF
Sbjct: 181 SQDDDLGLQTLPPTANITWSFEANFFHSTLFWCRLQKGGGGGHGSVRAAFKVFWHDVRLF 240

[Close]

BLAST of Clc09G09890 vs. NCBI nr
Match: KAA0050608.1 (leguminosin group486 secreted peptide [Cucumis melo var. makuwa] >TYK07832.1 leguminosin group486 secreted peptide [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.9e-65
Identity = 115/136 (84.56%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 93  TFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSW 152
           T T PSLCLETK+NVFPAFIRWHVTVIN LN + AMSVHC+SQDDDLGLQTLPPTAN+SW
Sbjct: 24  TLTFPSLCLETKDNVFPAFIRWHVTVINRLNDSKAMSVHCRSQDDDLGLQTLPPTANISW 83

Query: 153 SFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYI 212
           SF+ANFFHSTLFWC LQKGGG   GG RAAFKVFWHD RLFEKCGWKNCIWIAKD GIYI
Sbjct: 84  SFEANFFHSTLFWCRLQKGGGSIHGGVRAAFKVFWHDVRLFEKCGWKNCIWIAKDGGIYI 143

Query: 213 RNFAQGTDQLCYLWEG 229
           RNFA+G DQL Y WEG
Sbjct: 144 RNFAKGIDQLSYPWEG 159

[Close]

BLAST of Clc09G09890 vs. NCBI nr
Match: XP_031744194.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 2.5e-65
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 92  KTFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVS 151
           +T TLPSLCLETK+NVFPAFIRWHVTVIN LN +  M VHC+SQDDDLGLQTLPPTAN++
Sbjct: 22  QTLTLPSLCLETKDNVFPAFIRWHVTVINRLNASKGMLVHCRSQDDDLGLQTLPPTANIT 81

Query: 152 WSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIY 211
           WSF+ANFFHSTLFWC LQKGGGGG G  RAAFKVFWHD RLF+KCGWKNCIW+AKDDGIY
Sbjct: 82  WSFEANFFHSTLFWCRLQKGGGGGHGSVRAAFKVFWHDVRLFDKCGWKNCIWMAKDDGIY 141

Query: 212 IRNFAQGTDQLCYLWEG 229
           IRNFA+  DQL Y WEG
Sbjct: 142 IRNFAKEIDQLSYTWEG 158

[Close]

BLAST of Clc09G09890 vs. NCBI nr
Match: KAG7014486.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 258.8 bits (660), Expect = 4.3e-65
Identity = 122/199 (61.31%), Postives = 143/199 (71.86%), Query Frame = 0


Query: 30  NKYYVRIIINGFNNATIGVHCKSKDNDLNNHFIPIWGHITYQAYWHEDNFERDACGVGHC 89
           ++YYV  ++NG +   + VHC+SKD+DL  H +P  G          D+F+         
Sbjct: 156 SRYYVH-VVNGLSTLPLTVHCQSKDDDLGIHHLPNRG----------DDFQ--------- 215

Query: 90  RWKTFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTAN 149
            W          +TK +VFPAFIRWHVTV NGLNG  AMSVHC+SQDDDLGL TLPPTA+
Sbjct: 216 -WN--------FKTKGSVFPAFIRWHVTVTNGLNGAEAMSVHCRSQDDDLGLHTLPPTAD 275

Query: 150 VSWSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDG 209
            SWSF+ANFFH+TLFWC LQKGGGGG GG  AAFKVFWHD RLFEKCGWKNC+WIAKDDG
Sbjct: 276 FSWSFEANFFHTTLFWCRLQKGGGGG-GGVEAAFKVFWHDARLFEKCGWKNCVWIAKDDG 324

Query: 210 IYIRNFAQGTDQLCYLWEG 229
           IYI+NFA+G D+L Y WEG
Sbjct: 336 IYIKNFAKGIDELSYTWEG 324

[Close]

BLAST of Clc09G09890 vs. NCBI nr
Match: KAG6575954.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 8.4e-45
Identity = 81/100 (81.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 128 MSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFW 187
           MSVHC+SQDDDLGL TLPPTA+ SWSF+ANFFH+TLFWC LQKGGGG  GG  AAFKVFW
Sbjct: 1   MSVHCRSQDDDLGLHTLPPTADFSWSFEANFFHTTLFWCRLQKGGGG--GGVEAAFKVFW 60

Query: 188 HDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQLCYLWE 228
           HD RLFEKCGWKNC+WIAKDDGIYI+NFA+G D+L Y WE
Sbjct: 61  HDARLFEKCGWKNCVWIAKDDGIYIKNFAKGIDELSYTWE 98

[Close]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-28
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 103 TKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHST 162
           T++ + P    W VTV+NGL     + +HC+S++DDLG   L      SW+F  N  HST
Sbjct: 30  TRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHST 89

Query: 163 LFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQL 222
            FWC++ K  G           VFW D  LF +CGWKNCIW AK DG+Y+ N A G D L
Sbjct: 90  FFWCYMNKDNG------HMNVNVFWDDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVL 148

Query: 223 CYLWE 228
              WE
Sbjct: 150 SRKWE 148

[Close]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.8e-26
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 103 TKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHST 162
           T++ V P    W VTV NGL     + +HC+S+++DLG   L      SW+F  N  HST
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHST 89

Query: 163 LFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQL 222
           LFWC++ K  G          KVFW D  LF +C WKNC+W AK+DG+Y+ N A G D L
Sbjct: 90  LFWCYMSKDDG------HMNVKVFWDDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVL 148

Query: 223 CYLWE 228
              W+
Sbjct: 150 SEKWK 148

[Close]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 42/136 (30.88%), Postives = 64/136 (47.06%), Query Frame = 0


Query: 96  LPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQ 155
           L S  L      FP      V ++N      ++ +HC+S+D+DL  QT+    ++S+SF+
Sbjct: 9   LLSFFLSKSSGFFPVI---EVRIMNRRGNGRSIGIHCRSKDNDLQNQTVTSGHDMSFSFR 68

Query: 156 ANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFW----HDGRLFEKCGWKNCIWIAKDDGIY 215
            +FFH+T F+C LQ      D   +  F  +      DGR   +C WK       DDG+Y
Sbjct: 69  EDFFHTTHFYCDLQ-----WDKETKFGFYSYQAKRDDDGRCSSQCLWK-----IMDDGLY 125

Query: 216 IRNFAQGTDQLCYLWE 228
                 G DQ   +W+
Sbjct: 129 ------GFDQEHQIWQ 125

[Close]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.5e-09
Identity = 35/101 (34.65%), Postives = 48/101 (47.52%), Query Frame = 0


Query: 112 IRWHVTVINGLN-GTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQK 171
           IR H+T +   N     + +HC+S+DDDLG   L       W F  NF +STL++C    
Sbjct: 41  IRGHLTRVTIQNDNDYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFC---- 100

Query: 172 GGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIY 212
             G   G  +      +   R F +C   NC W A+ DGIY
Sbjct: 101 --GFSQGQMKKGVFEIYRANRDFYRCA--NCTWKAEKDGIY 133

[Close]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 33/114 (28.95%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 116 VTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGG 175
           V + N L   + +++HC+S DDDLGL+ L P  + S+ F+ +   +TLF+CH    G   
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQS- 98

Query: 176 DGGCRAAFKVFWHD-GRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQLCYLWEG 229
                  F ++  D   +       NCIW     G  + + +     +CY W G
Sbjct: 99  -----KRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDWNG 146

[Close]

BLAST of Clc09G09890 vs. ExPASy TrEMBL
Match: A0A5A7U5Q7 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G001290 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 9.3e-66
Identity = 115/136 (84.56%), Postives = 121/136 (88.97%), Query Frame = 0


Query: 93  TFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSW 152
           T T PSLCLETK+NVFPAFIRWHVTVIN LN + AMSVHC+SQDDDLGLQTLPPTAN+SW
Sbjct: 24  TLTFPSLCLETKDNVFPAFIRWHVTVINRLNDSKAMSVHCRSQDDDLGLQTLPPTANISW 83

Query: 153 SFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYI 212
           SF+ANFFHSTLFWC LQKGGG   GG RAAFKVFWHD RLFEKCGWKNCIWIAKD GIYI
Sbjct: 84  SFEANFFHSTLFWCRLQKGGGSIHGGVRAAFKVFWHDVRLFEKCGWKNCIWIAKDGGIYI 143

Query: 213 RNFAQGTDQLCYLWEG 229
           RNFA+G DQL Y WEG
Sbjct: 144 RNFAKGIDQLSYPWEG 159

[Close]

BLAST of Clc09G09890 vs. ExPASy TrEMBL
Match: A0A0A0K6N5 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333900 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.2e-65
Identity = 112/137 (81.75%), Postives = 122/137 (89.05%), Query Frame = 0


Query: 92  KTFTLPSLCLETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVS 151
           +T TLPSLCLETK+NVFPAFIRWHVTVIN LN +  M VHC+SQDDDLGLQTLPPTAN++
Sbjct: 22  QTLTLPSLCLETKDNVFPAFIRWHVTVINRLNASKGMLVHCRSQDDDLGLQTLPPTANIT 81

Query: 152 WSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIY 211
           WSF+ANFFHSTLFWC LQKGGGGG G  RAAFKVFWHD RLF+KCGWKNCIW+AKDDGIY
Sbjct: 82  WSFEANFFHSTLFWCRLQKGGGGGHGSVRAAFKVFWHDVRLFDKCGWKNCIWMAKDDGIY 141

Query: 212 IRNFAQGTDQLCYLWEG 229
           IRNFA+  DQL Y WEG
Sbjct: 142 IRNFAKEIDQLSYTWEG 158

[Close]

BLAST of Clc09G09890 vs. ExPASy TrEMBL
Match: A0A6J1GQY7 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456308 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 87/137 (63.50%), Postives = 101/137 (73.72%), Query Frame = 0


Query: 113 RWHVTVINGLNGTIAMSVHCQS---------------------QDDDLGLQTLPPTANVS 172
           R++V V NGL+ T+ ++VHCQS                     +DDDLGL TLPPTA+ S
Sbjct: 20  RYYVHVANGLS-TLPLTVHCQSKDDDLGIHHLPNRGDDFQWNFKDDDLGLHTLPPTADFS 79

Query: 173 WSFQANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIY 229
           WSF+ANFFH+TLFWC LQKGGGG  GG  AAFKVFWHD RLFEKCGWKNC+WIAKDDGIY
Sbjct: 80  WSFEANFFHTTLFWCRLQKGGGG--GGVEAAFKVFWHDARLFEKCGWKNCVWIAKDDGIY 139

[Close]

BLAST of Clc09G09890 vs. ExPASy TrEMBL
Match: A0A5N5H3T8 (S-protein homolog OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039876 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.4e-39
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 97  PSLCL-ETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQ 156
           PSLC   TK  VFP F +WHV V+NG+    ++ VHC+S+D+DLG+Q L P  N +W F+
Sbjct: 20  PSLCFPSTKGEVFPVFTKWHVYVVNGVGNQESLFVHCKSKDNDLGIQNLSPGTNTTWGFR 79

Query: 157 ANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNF 216
            NFFHSTLFWC+L+K          AA KVFW D  LFEKC WKNCIWIAKDDGIYI++F
Sbjct: 80  TNFFHSTLFWCYLRKSSAQ-----HAALKVFWQDIYLFEKCNWKNCIWIAKDDGIYIKDF 139

Query: 217 AQGTDQLCYLWE 228
           A   D+    WE
Sbjct: 140 ANVRDEFSKKWE 146

[Close]

BLAST of Clc09G09890 vs. ExPASy TrEMBL
Match: A0A5N5FGI6 (S-protein homolog OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_003072 PE=3 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 7.4e-39
Identity = 74/132 (56.06%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 97  PSLCL-ETKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQ 156
           PSLC   TK  VFP F +WHV V+NG+    ++ VHC+S+D+DLG+Q L P  N +W F+
Sbjct: 20  PSLCFPSTKGEVFPVFTKWHVYVVNGVGNQESLFVHCKSKDNDLGIQNLSPGTNTTWGFR 79

Query: 157 ANFFHSTLFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNF 216
            NFFHSTLFWC+L+K          AA KVFW D  LFEKC WKNCIWIAKDDGIYI++F
Sbjct: 80  TNFFHSTLFWCYLRKSSAQ-----HAALKVFWQDIYLFEKCNWKNCIWIAKDDGIYIKDF 139

Query: 217 AQGTDQLCYLWE 228
           A   D+    WE
Sbjct: 140 ANFRDEFSKKWE 146

[Close]

BLAST of Clc09G09890 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-29
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 103 TKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHST 162
           T++ + P    W VTV+NGL     + +HC+S++DDLG   L      SW+F  N  HST
Sbjct: 30  TRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHST 89

Query: 163 LFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQL 222
            FWC++ K  G           VFW D  LF +CGWKNCIW AK DG+Y+ N A G D L
Sbjct: 90  FFWCYMNKDNG------HMNVNVFWDDVILFHRCGWKNCIWTAKTDGLYLWNSASGEDVL 148

Query: 223 CYLWE 228
              WE
Sbjct: 150 SRKWE 148

[Close]

BLAST of Clc09G09890 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-27
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 103 TKENVFPAFIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHST 162
           T++ V P    W VTV NGL     + +HC+S+++DLG   L      SW+F  N  HST
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHST 89

Query: 163 LFWCHLQKGGGGGDGGCRAAFKVFWHDGRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQL 222
           LFWC++ K  G          KVFW D  LF +C WKNC+W AK+DG+Y+ N A G D L
Sbjct: 90  LFWCYMSKDDG------HMNVKVFWDDVILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVL 148

Query: 223 CYLWE 228
              W+
Sbjct: 150 SEKWK 148

[Close]

BLAST of Clc09G09890 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 33/114 (28.95%), Postives = 53/114 (46.49%), Query Frame = 0


Query: 116 VTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGG 175
           V + N L   + +++HC+S DDDLGL+ L P  + S+ F+ +   +TLF+CH    G   
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQS- 98

Query: 176 DGGCRAAFKVFWHD-GRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQLCYLWEG 229
                  F ++  D   +       NCIW     G  + + +     +CY W G
Sbjct: 99  -----KRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESDHAFNICYDWNG 146

[Close]

BLAST of Clc09G09890 vs. TAIR 10
Match: AT5G04047.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 61.6 bits (148), Expect = 9.3e-10
Identity = 35/121 (28.93%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 111 FIRWHVTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQK 170
           F  +++ + N L G   + ++C+S           P  N  W+ +   F  TL WC++  
Sbjct: 25  FRHFNIQISNQLGGNKQLMINCRSGKQQATKVDFLP-FNTVWTLKFTVFPKTLIWCNVWM 84

Query: 171 GGGGGDGGCRAAFKVF-WHDGRLFEKCGWKN---CIWIAKDDGIYIRNFAQGTDQLCYLW 228
           G         A F  F   +  + + CG +    C W A++DGIY+RN A GT +L Y W
Sbjct: 85  GPNYVH---HAKFNAFIGKESFIHDICGGRKPNICFWQAQEDGIYVRNNATGTFKLMYKW 141

[Close]

BLAST of Clc09G09890 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 33/113 (29.20%), Postives = 52/113 (46.02%), Query Frame = 0


Query: 116 VTVINGLNGTIAMSVHCQSQDDDLGLQTLPPTANVSWSFQANFFHSTLFWCHLQKGGGGG 175
           V + N L G + +  HC+S++DDLG Q+L P  + S+ F  + F  TLF+C    G    
Sbjct: 28  VVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAES- 87

Query: 176 DGGCRAAFKVFWHD-GRLFEKCGWKNCIWIAKDDGIYIRNFAQGTDQLCYLWE 228
                  F ++     + F++ G K C W  + +G        G    CY W+
Sbjct: 88  -----HIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSWD 134

The following BLAST results are available for this feature:

BLAST of Clc09G09890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646226.1	4.1e-100	65.82	hypothetical protein Csa_016670 [Cucumis sativus]	[more]
KAA0050608.1	1.9e-65	84.56	leguminosin group486 secreted peptide [Cucumis melo var. makuwa] >TYK07832.1 leg...	[more]
XP_031744194.1	2.5e-65	81.75	S-protein homolog 1-like [Cucumis sativus]	[more]
KAG7014486.1	4.3e-65	61.31	S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6575954.1	8.4e-45	81.00	S-protein-like 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Clc09G09890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	4.3e-28	44.00	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.8e-26	43.20	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q40975	2.6e-09	30.88	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]
P0DN92	4.5e-09	34.65	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FMQ4	1.3e-08	28.95	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]

BLAST of Clc09G09890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U5Q7	9.3e-66	84.56	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G0...	[more]
A0A0A0K6N5	1.2e-65	81.75	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_7G333900 PE=3 SV=1	[more]
A0A6J1GQY7	2.0e-44	63.50	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456308 PE=3 SV=1	[more]
A0A5N5H3T8	7.4e-39	56.06	S-protein homolog OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_0398...	[more]
A0A5N5FGI6	7.4e-39	56.06	S-protein homolog OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_0030...	[more]

BLAST of Clc09G09890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	3.1e-29	44.00	S-protein homologue 1	[more]
AT4G29035.1	1.3e-27	43.20	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	9.3e-10	28.95	Plant self-incompatibility protein S1 family	[more]
AT5G04047.1	9.3e-10	28.93	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	1.6e-09	29.20	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 115..226 e-value: 1.1E-27 score: 96.6
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 104..212 coord: 23..77
None	No IPR available	PANTHER	PTHR31232:SF46	S-PROTEIN HOMOLOG 1-RELATED	coord: 104..212 coord: 23..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G09890.2	Clc09G09890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region