Clc09G09860 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G09860
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr09: 8477597 .. 8478043 (+)
RNA-Seq Expression	Clc09G09860
Synteny	Clc09G09860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTATGATGAGGAATATGGTTGTTTTGTGGCTCGTGACGGCGGCTTTGGTTGGGGCTCAGGTTCCGAGGGTGGCGTTACCTCCGCCATCGCCTTCGAGGTACTATGTTCACATCGTAAATGGTCTAAGCCAGTTCAGTATGCTTGTGCATTGCCAGTCCAAGGACGATGATTTGGGATATCAACATTTGCAGAACCGTGGAGATGATTTTCAATGGAATTTTAAGGTGAACTTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCAGATGCATATGTCTCTTTCGAGACCTTTTGGCCTGAGTCTAAGAACACTTGGCTTCGTGATAGGTGTGGGAGTCAAGGAAGTTGTATTTGGATTGCTAAAGATGATGGAATTTATCTCAGAAACAATCCAGCTCAAGTTGACGAGCTTATTCACAAATGGATCCCGATTTGA

mRNA sequence

ATGATTATGATGAGGAATATGGTTGTTTTGTGGCTCGTGACGGCGGCTTTGGTTGGGGCTCAGGTTCCGAGGGTGGCGTTACCTCCGCCATCGCCTTCGAGGTACTATGTTCACATCGTAAATGGTCTAAGCCAGTTCAGTATGCTTGTGCATTGCCAGTCCAAGGACGATGATTTGGGATATCAACATTTGCAGAACCGTGGAGATGATTTTCAATGGAATTTTAAGGTGAACTTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCAGATGCATATGTCTCTTTCGAGACCTTTTGGCCTGAGTCTAAGAACACTTGGCTTCGTGATAGGTGTGGGAGTCAAGGAAGTTGTATTTGGATTGCTAAAGATGATGGAATTTATCTCAGAAACAATCCAGCTCAAGTTGACGAGCTTATTCACAAATGGATCCCGATTTGA

Coding sequence (CDS)

ATGATTATGATGAGGAATATGGTTGTTTTGTGGCTCGTGACGGCGGCTTTGGTTGGGGCTCAGGTTCCGAGGGTGGCGTTACCTCCGCCATCGCCTTCGAGGTACTATGTTCACATCGTAAATGGTCTAAGCCAGTTCAGTATGCTTGTGCATTGCCAGTCCAAGGACGATGATTTGGGATATCAACATTTGCAGAACCGTGGAGATGATTTTCAATGGAATTTTAAGGTGAACTTTTGGGGAACAACCTTGTTTTGGTGCAAATTGGAGAAGCCAGATGCATATGTCTCTTTCGAGACCTTTTGGCCTGAGTCTAAGAACACTTGGCTTCGTGATAGGTGTGGGAGTCAAGGAAGTTGTATTTGGATTGCTAAAGATGATGGAATTTATCTCAGAAACAATCCAGCTCAAGTTGACGAGCTTATTCACAAATGGATCCCGATTTGA

Protein sequence

MIMMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNPAQVDELIHKWIPI

Homology

[Close]

BLAST of Clc09G09860 vs. NCBI nr
Match: XP_038896423.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 117/145 (80.69%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 4   MRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQH 63
           MRN+VVLWL TAALVGAQ+PR ++PPP PSRYYVH+VNGLS   M+VHCQSKDDDLGY H
Sbjct: 1   MRNVVVLWLATAALVGAQIPRWSVPPPQPSRYYVHVVNGLSNADMVVHCQSKDDDLGYHH 60

Query: 64  LQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPES-KNTWLRDRCGSQGSCIW 123
           L NRGDD+QWNFK NFWGTTLFWCKLEKP+AYVSFE+FWPES KNTWLRDRCG+QG+CIW
Sbjct: 61  LVNRGDDYQWNFKENFWGTTLFWCKLEKPNAYVSFESFWPESFKNTWLRDRCGTQGTCIW 120

Query: 124 IAKDDGIYLRNNPAQVDELIHKWIP 148
            AKDDGIYLRN P  VDE +HKW+P
Sbjct: 121 TAKDDGIYLRNMPINVDEFVHKWLP 145

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BLAST of Clc09G09860 vs. NCBI nr
Match: XP_038896433.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 115/147 (78.23%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MIMMRNMVVLWLVTAALVGA-QVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDL 60
           MI  RN++ LWL+TAALVGA Q+ R+ LPPP+ SRYY+HIVNGLS+F M+VHCQSKDDDL
Sbjct: 1   MIQFRNVLFLWLITAALVGADQILRLTLPPPAVSRYYIHIVNGLSKFDMVVHCQSKDDDL 60

Query: 61  GYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRCGSQGS 120
           GY HL N GDD+QWNF VNFW TTLFWCKLEKPDAYVSFE FWPESK+TWLRDRCG+QG+
Sbjct: 61  GYHHLVNHGDDYQWNFNVNFWETTLFWCKLEKPDAYVSFEVFWPESKSTWLRDRCGTQGT 120

Query: 121 CIWIAKDDGIYLRNNPAQVDELIHKWI 147
           CIW AKDDGIYLRN PA VDE +HKWI
Sbjct: 121 CIWTAKDDGIYLRNMPANVDEFVHKWI 147

[Close]

BLAST of Clc09G09860 vs. NCBI nr
Match: XP_022933333.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 113/145 (77.93%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPPP PSRYY+H+VNGLS+  +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCKLE PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. NCBI nr
Match: XP_022933269.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 3.4e-63
Identity = 111/145 (76.55%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRV+LPPP PSRYY+H+VNGLS+  +LVHCQSKDDDL Y 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVSLPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLEYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCKLE PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. NCBI nr
Match: XP_022933268.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 251.1 bits (640), Expect = 5.8e-63
Identity = 111/145 (76.55%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPP  PSRYY+H+VNGLS   +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPLGPSRYYIHVVNGLSNLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCK+E PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKMETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

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BLAST of Clc09G09860 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-18
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 17  LVGAQVPRVALPPPSPSRYYVHIVNGLSQ-FSMLVHCQSKDDDLGYQHLQNRGDDFQWNF 76
           LVG    R  +  P  S + V +VNGL+   ++ +HC+SK+DDLG  +L+ R + F WNF
Sbjct: 24  LVGGTTTRDII-VPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNF 83

Query: 77  KVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNP 136
             N   +T FWC + K + +++   FW +     L  RCG + +CIW AK DG+YL N+ 
Sbjct: 84  GENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCGWK-NCIWTAKTDGLYLWNSA 143

Query: 137 AQVDELIHKW 146
           +  D L  KW
Sbjct: 144 SGEDVLSRKW 147

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BLAST of Clc09G09860 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 30  PSPSRYYVHIVNGLSQ-FSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCK 89
           P  S + V + NGL+   ++ +HC+SK++DLG  +L+   D F WNF  N   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLHSTLFWCY 95

Query: 90  LEKPDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNPAQVDELIHKW 146
           + K D +++ + FW +     L  RC  + +C+W AK+DG+YL N+    D L  KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Clc09G09860 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-10
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 50  VHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWP-ESKNT 109
           VHC+SK++D+G ++L+  G+   ++FK NFWGTT FWC L K   Y  +      ++   
Sbjct: 42  VHCKSKNNDIGVKYLK-IGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAIGL 101

Query: 110 WLRDRCGSQGSCIWIAKDDGIYLRNN 135
           + +D  GS  S  W+A+DDGIY   +
Sbjct: 102 FAKD--GS--SYNWLARDDGIYFHKD 122

[Close]

BLAST of Clc09G09860 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-10
Identity = 36/114 (31.58%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 33  SRYYVHIVNGL-SQFSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEK 92
           S+  V I N L +Q ++L HC+SKDDDLG + LQ  G+ + ++F   F+G TL++C    
Sbjct: 46  SKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQ-PGESWSFSFGRQFFGRTLYFCSFSW 105

Query: 93  PDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNPAQVDELIHKW 146
           P+   SF+  + + +++   ++C S   C+W  + +G    N+  +  +L + W
Sbjct: 106 PNESHSFD-IYKDHRDSGGDNKCESD-RCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Clc09G09860 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 33/111 (29.73%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 40  VNGLSQFSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFE 99
           V   + + + +HC+SKDDDLG+ H+   G+ + W F VNF  +TL++C   +        
Sbjct: 51  VKNNNDYLLGIHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYFCGFSQGQ------ 110

Query: 100 TFWPESKNTWLRDRCGSQ----GSCIWIAKDDGIYLRNNPAQVDELIHKWI 147
               ++K  +  DR         +C W AK D +Y  +N  Q      KW+
Sbjct: 111 ----DNKGVFDIDRAERDFYRCRNCTWNAKKDSLYGYSNLPQTVTWFFKWL 150

[Close]

BLAST of Clc09G09860 vs. ExPASy TrEMBL
Match: A0A6J1F4G4 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440599 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 8.7e-65
Identity = 113/145 (77.93%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPPP PSRYY+H+VNGLS+  +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCKLE PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. ExPASy TrEMBL
Match: A0A6J1EZA2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440334 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 111/145 (76.55%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRV+LPPP PSRYY+H+VNGLS+  +LVHCQSKDDDL Y 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVSLPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLEYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCKLE PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. ExPASy TrEMBL
Match: A0A6J1EZB7 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440401 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 112/145 (77.24%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPPP PSRYY+H+VNGLS+  +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLF CKLE PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFCCKLETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. ExPASy TrEMBL
Match: A0A6J1F497 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440333 PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 111/145 (76.55%), Postives = 125/145 (86.21%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPP  PSRYY+H+VNGLS   +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPLGPSRYYIHVVNGLSNLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
           HL N GDD+QWNFKVNFWGTTLFWCK+E PDAYVSFE+FWPES++ WLRDRC  G+ G+C
Sbjct: 61  HLLNHGDDYQWNFKVNFWGTTLFWCKMETPDAYVSFESFWPESQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKW 146
           IW AKDDGIYLRN  A VDELIHKW
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKW 145

[Close]

BLAST of Clc09G09860 vs. ExPASy TrEMBL
Match: A0A6J1EYX0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111439907 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.2e-63
Identity = 110/146 (75.34%), Postives = 126/146 (86.30%), Query Frame = 0


Query: 3   MMRNMVVLWLVTAALVGAQVPRVALPPPSPSRYYVHIVNGLSQFSMLVHCQSKDDDLGYQ 62
           M++N+VV +L T ALVGAQVPRVALPPP PSRYY+H+VNGLS+  +LVHCQSKDDDLGY 
Sbjct: 1   MIKNIVVFFLFTVALVGAQVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYH 60

Query: 63  HLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRC--GSQGSC 122
            L N GDD+QWNFKVNFWGTTL+WCKLE P AYVSFE+FWPE+++ WLRDRC  G+ G+C
Sbjct: 61  RLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTC 120

Query: 123 IWIAKDDGIYLRNNPAQVDELIHKWI 147
           IW AKDDGIYLRN  A VDELIHKWI
Sbjct: 121 IWTAKDDGIYLRNFLANVDELIHKWI 146

[Close]

BLAST of Clc09G09860 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 0


Query: 17  LVGAQVPRVALPPPSPSRYYVHIVNGLSQ-FSMLVHCQSKDDDLGYQHLQNRGDDFQWNF 76
           LVG    R  +  P  S + V +VNGL+   ++ +HC+SK+DDLG  +L+ R + F WNF
Sbjct: 24  LVGGTTTRDII-VPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNF 83

Query: 77  KVNFWGTTLFWCKLEKPDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNP 136
             N   +T FWC + K + +++   FW +     L  RCG + +CIW AK DG+YL N+ 
Sbjct: 84  GENMLHSTFFWCYMNKDNGHMNVNVFWDD---VILFHRCGWK-NCIWTAKTDGLYLWNSA 143

Query: 137 AQVDELIHKW 146
           +  D L  KW
Sbjct: 144 SGEDVLSRKW 147

[Close]

BLAST of Clc09G09860 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 30  PSPSRYYVHIVNGLSQ-FSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCK 89
           P  S + V + NGL+   ++ +HC+SK++DLG  +L+   D F WNF  N   +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLHSTLFWCY 95

Query: 90  LEKPDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNPAQVDELIHKW 146
           + K D +++ + FW +     L  RC  + +C+W AK+DG+YL N+    D L  KW
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRCDWK-NCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Clc09G09860 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 37  VHIVNGLSQFSML-VHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEK-PD- 96
           V + N L    +L VHC+SKDDDLG +H+   G D+++ F  N W TT F C++++ P+ 
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 88

Query: 97  ----AYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIY 131
                +V++ET W ++           + SC WI ++DGIY
Sbjct: 89  KHHLDFVAYETSWSKA----------LEASCKWIGREDGIY 118

[Close]

BLAST of Clc09G09860 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.5 bits (158), Expect = 4.2e-11
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 50  VHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEKPDAYVSFETFWP-ESKNT 109
           VHC+SK++D+G ++L+  G+   ++FK NFWGTT FWC L K   Y  +      ++   
Sbjct: 42  VHCKSKNNDIGVKYLK-IGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAIGL 101

Query: 110 WLRDRCGSQGSCIWIAKDDGIYLRNN 135
           + +D  GS  S  W+A+DDGIY   +
Sbjct: 102 FAKD--GS--SYNWLARDDGIYFHKD 122

[Close]

BLAST of Clc09G09860 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.1 bits (157), Expect = 5.5e-11
Identity = 36/114 (31.58%), Postives = 65/114 (57.02%), Query Frame = 0


Query: 33  SRYYVHIVNGL-SQFSMLVHCQSKDDDLGYQHLQNRGDDFQWNFKVNFWGTTLFWCKLEK 92
           S+  V I N L +Q ++L HC+SKDDDLG + LQ  G+ + ++F   F+G TL++C    
Sbjct: 46  SKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQ-PGESWSFSFGRQFFGRTLYFCSFSW 105

Query: 93  PDAYVSFETFWPESKNTWLRDRCGSQGSCIWIAKDDGIYLRNNPAQVDELIHKW 146
           P+   SF+  + + +++   ++C S   C+W  + +G    N+  +  +L + W
Sbjct: 106 PNESHSFD-IYKDHRDSGGDNKCESD-RCVWKIRRNGPCRFNDETKQFDLCYPW 156

The following BLAST results are available for this feature:

BLAST of Clc09G09860 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896423.1	5.4e-69	80.69	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_038896433.1	1.5e-66	78.23	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_022933333.1	1.8e-64	77.93	S-protein homolog 1-like [Cucurbita moschata]	[more]
XP_022933269.1	3.4e-63	76.55	S-protein homolog 1-like [Cucurbita moschata]	[more]
XP_022933268.1	5.8e-63	76.55	S-protein homolog 1-like [Cucurbita moschata]	[more]

BLAST of Clc09G09860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.6e-18	39.23	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	1.7e-17	38.46	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
Q9LW22	5.9e-10	39.53	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
F4JLQ5	7.7e-10	31.58	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FI84	2.2e-09	29.73	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of Clc09G09860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F4G4	8.7e-65	77.93	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440599 PE=3 SV=1	[more]
A0A6J1EZA2	1.6e-63	76.55	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440334 PE=3 SV=1	[more]
A0A6J1EZB7	2.8e-63	77.24	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440401 PE=3 SV=1	[more]
A0A6J1F497	2.8e-63	76.55	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111440333 PE=3 SV=1	[more]
A0A6J1EYX0	8.2e-63	75.34	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111439907 PE=3 SV=1	[more]

BLAST of Clc09G09860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.1e-19	39.23	S-protein homologue 1	[more]
AT4G29035.1	1.2e-18	38.46	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.1e-11	36.63	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	4.2e-11	39.53	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	5.5e-11	31.58	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..145 e-value: 4.0E-25 score: 88.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 32..146
None	No IPR available	PANTHER	PTHR31232:SF99	SUBFAMILY NOT NAMED	coord: 32..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G09860.1	Clc09G09860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region