Clc09G09620 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G09620
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionthioredoxin-like protein 4B
LocationClcChr09: 8283435 .. 8289895 (+)
RNA-Seq ExpressionClc09G09620
SyntenyClc09G09620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTAAGATTTGTCCTTATTCTTATTTGGACTCACTAAACTACTAGCCTTCATCATTGTTTTTGGGTACATATTGTATTTGGAATAAATATAAAAATTAAAGTTAATAACCTTTTAGTAAATATATATTTTTCTAAAAAAACACGTTTTACCTCTCTTCATCTGTGATAACAAGTTTCAAAGTTTCTTTTAAAGATATTGAATTGTAAAAAATCAAAAGAAGACCTTATAGTGCCAAGTCAAGATACGAACAAAAGAATCAAAATAACCAAGCATAAACACACAAACAAAAAAAAAAGCCAATACAACTCAAAGAAAAAGATCATGAAGAGGAGGGCATGCTTGAGTCCCTTTTTGATAGAAATCCCAACCCACTAAAAACAACAAAAAAAAAAAAAACCTCATATTGCACCACCCGACTAATCACTCAGAGTAGACGCATAGTAGCTTCAAAAACATAAAGATTTTATTCATGCCAAATATATAGATAAAATACACCAAGCCAATCTCTAAACTTCTTAGACCTATTACCCACTCTAAAGTGTCAAATTCAATTAAGCTTAGTACCCTAACAAGTGATCATGTGAGAACATGGCCCCAAACTAGCATGTCTCCTACATTTCAATATTTTCAGAAGTCTTCCTTTCTTATGCTTGATACTTAGAAGAAAAAAAAAAAAAAACTATATAGTCTAAAAAGAAGAAACAAAAAATGCATTTATTCTCCTATAAAAAAAAAGAAAAAAAAAAAACTTTGAATCAATTCTAAAAGTACTTTAACCAACCACAAATTTGACCAAACACATATTCTTGAAACACACATATTCTTGAAAACTGAGGGACCAAAAGAACATTTCTCCAATTTATATATAGCAGAGATATCATTATTTTCTTTTATTTTTTCATTAGTTTCACATCAAATTTAGATAGAAATATTTTAGATTCTTATTTAGTTTGGAACTAAATTGATTTGTAGAAATTAATTTTGCTATTAGAAACTAATGATTAAAAGAGTATATCATTTTACTATTTTTTACATAATCTTTTTAAATATAGTAAAAAGACCAAAATATTTATAAATATAGTAAAATTTTACTGTCTATTTGCGATATAATGTGATATTATAAATATTTTCAGCAGTTTTGCCATTTAAAATAATTTTCCTTTGAATTATTAAGAAATAAAAATGATCGAAAATCTTAGAGCCTGTTTGGATTGATTTAAGAAAAAAATGTTTACCAAAATATTCATTTTTATTTAAACTTTTTGATAAAAACGATTTAGATTCTAAAATAAACTTTAAAACGGTTTATTTTAATTAAATACTTTAGAAATGTATTACAAACACACTTTTAATTTGGTTTCGACCCCATCATATGCAGTGAAATTCAAATCACTAAAAAAAAAAAAAATTCATTGTTTCGTTTTTTTTGGAAAAATCAAAAGGAAATAAATATTTTTGTAATTATCCTCTAGAGTTATTTAAAAAACAAGACCCTTCATATTTCTCTTCCTTCGCAAAATTTGGTCACCCATCCGGCGAATCCTTCTCATCCTTCCTTATTTGGACAAAGGGGCCAATTTGGGAGGTTCAGCTTGCTTTTCAACCGGCAACGGGAGCTCGGCGGCGTCCCTCCTCGACGATACCAGCAAACTCCGGCGGCGGTGGCGCTCACAGCAAAGGTAATTTCCCTCTTCCTTCCAGCGGTCCACAATTTTGTTGATTTTGGGTTTAAGCTGCAATGTTTTCGACTTCGATTTAGATTGCATTATATATATATGTGAATAGTTTCAAAAAGAATAATTCGACAACGTTTGGTGTCTAAGCTGGTTTAGTTTCTTAAGCTTAATTAGTTTAGGCGAATTGCAGGAAAAGGAGGATGAGCTATCTTCTAAGGACCTTAACAAAGAAGAGAGAAGTGGATTCCCTCATTAGGGACACGATCGATAAGGTTCTAATTCTCCGATTTGGGCGGTGTTCCGATTCAGTTTGTCTCCTCCATGACGACATTGTGTGTTACCTAGTCCCTGAATTTTGTTTTCTTCTTCCAGGGTTGATATGTTTTTTCAAAATTGATGATTTCTTTTTCCTTGTGTTTCATTCTCTTTCAATGATTTAGCTTGCTAAATGCGCACGGGAAGTATCGAAGTTTGCTTCAATAGCACTGGTTGATATTGATTCACAAGACATACAGGTTTACGTTAAGTACTTTGACATAACTCTTATACCATCCACTGTTTTCTTCTTCAATGCTCATCATATGAAGATGGATTCAGGGTGAGTTTTATCCTGTTGGTCTGAGTTAATTTATTGCTTGATTTCTGTTCAAATATGTCAGTATGGATATGGTGACATTGCATACGGTCGATATGTGTGGCCTTAGCTACTTGACTTGCATAGTAGAACAGCTTAACATCCATTGGGATTGTTAGAAATTGCTGTTGAAATGACAAGTGAAGACACTAAAGAGTATTTACTTTATTGGAAAAAGGAAATTGGAAATTTGTTATCTTTTGGGAGAATGCTGCAAGGATCCTCCATACTATGTATTGATATGAGAAAGAAACAGCCCCAAGGAAATACAAACTCTCTGACCAATTCAAGAGGGTTGGGAAACTCTCCTCTCTTCCGAGAAACTATTATGGTACTTAAGTGGCTTGGCTCTCTCACTTCAATAGCTGGCTTTTGGGGTGTTCTCCAAGGTGTTTAAGTACCTAAAAATGGTATCAGAGCTAGTTGTCGACGTTTTGGAGAGGAGCACCAACGGAGGGTTCTGATTGAGTGTTTTCGAGTGAAGTACTATTGATCTAGCTGCTGGGATGTCGACTTTCTGGGATGGGGTATTGTTAGGAGCCAAGGTAGTATGGGCTACCTTTGTCCCAAATTGGTTAGAATGGGATGACCAATGTGGTACTTAAGTGACTTGGCTCTCTCACCTCAATAGCTGGCTTTGGGGTGTTGTTCCCCAAGGTGCTTAAGTATCTAACAACTCTTTGAGGCTGCCTTAAGCCTTTTAAAACATGCCTTTAGTTGCTGGAAAACAAAGGTTACTTCAAAGCTACCAAAGAAACCCAAGAAATGACCAGTTACCAACAAAGAGTAACTAAAAACTCTTCAATGATGCAGTCTCTTTTCATTTCATCAATGAAAAGTTACGTTTCTGTTTCAGGAAAAAAAAAAAGATCTTCAACGATGCATGAACTAAAATTCAATGAAATTTTTTTTTGATGAACTAGCACCAAGAAACTTGAAAAGAAACATTCTCCTAATGCTCTAAAATCTTTCAACAGAGGCGTACACTTATTTTTCACCTTCAAGGCATAAGCCTTGAGGCATCCTCTTGCTGTCACCACCTTAAGGCATACACTTTGAGTGATTTTTCAATCATTGCCCCTTCCTCTTTATACTACCCACAACCTAATAACGGTAACAAAGGTAAACCTCTCCTCCCCTTGGTGCCCACACTCTATTCGCCAACCTCACTCAGTTGTGCACGTGACTAACTTGTCCCCTCTGATATGTCCTTTTTACCTCTCCTCTTATATTGGTTAGTGATTGGTGGCCAAGCAGATGCCTCATCCTCTCAATGACTTATGGCATCTCTTATTGCTAATTGAATTATTTGTTTCTTATTAGATACAAAATGAACCTCTAAGGGTGTGTTTGGCCCAAAAAGTTGGGCAATGGGAGTTGGGAAGTAGGAGCCTCAAAGAGATGCCATAAGTCCTACTTCCCAACTCCTTGGGCCAAAGAGTCTACATAGAGGATAATGATATTATTGTCATTTTTTCCAGTTTGTTGTTTCCTTGTCATTTTCCTTAAAGAACATTTGTTACCATTTCAATACTTCACCCTTATGGTTAAGGCAACTCTAAGTAAATTTAAAAGCTATAATGTAGACCATGTGGTACAGTGTATAGTAGCATATTCTTTTTCAATGTTAATATTTCATATTGTTTCTACTTTTTTCTTTTCCCCGTAGTATTCCTCTATCATTTTTATTTTTAAATGTAACTCATGGAATAAAAATTAGAAACATGAGCAATTGGGGTTGGCTTAGTAGTGACAGGAACAAGCTATAAGCCCAAACGTCTTGGAGATTATGACTTATGAGTTCAACCTATTTTGACCGGACCATCTACTTAAGGATATACAATATCAAGTTTTCTTATACCGAATGTTTGTTAGATCAGATAGTTACTCTATCATATTAGTTGAAGTGTGAGTGAACTAGACATACAATTATCAAATAACTAACAATGAAAATAACCAGTAAGTTTTATTTTATGGTTATTACCAAGTCAAAATTAAATAATAATAAATTTGGACGGTTTTTCAATTGCTGGTCGATTGGTAAAGGGACTTGTTAGAGTCAAGGAGGTGGCTTATTATCTTTTGCTTGCAAATCCCTCTTGGGCAGATTTCAGTGTCTCAGTTTATAATAAAGTATTTGTTCGTAAGGTTCTTTGTAACGGGCAATGCCATTTGGGAATTTTTATATGCTCTTGTATTCTTTCATTTTTTCTCAATGAAAGTAGTTGTTTCTACCAACAAAAAAAAAAAAAAAAAGGAGAAAAAAAAAAGAGAGAGAGAGCAAGGATTACTATCTTGATTGCTTTGAACTGAAGAATTTTCTTGAAAGTCTTTTATAATCTCTTCTCTCTGTCTCTGTCTCTGTCTCTCCTTTTTTTTGGGTTGGGGGGGTGGTTAAATTTAGGAATCTACTTATGCCTCTTATGTATTCTACGTTTTTTTAATGATGAAAGGGTATTCTTTTGACATGTAGGACTGCGGATCACACAAAGTGGATTGGTGCTTTTCATCAAAAGCAGGATTTTATTGATGTTGTGGAGGTAAGTGGTCACAGAGTTTGGAACATAAATGAGATGCTGTGTATGGAAAAGATTGTTGATTTTTGGAATGATTACTTCACCTTAGACAGGTCTCAACTCGACTTATATTCCTAATATTTAGTATCGTAGCCTCTTCAAATACCTGCACAAAGGAGGAGATTGAGAAAATCTTATGCTTCAACTTGTTAGATCTTTTTTATGGAATTTCTTTGCCTTTGGTTAGACAACAACAACGGTTATGACATTAAGTAGTTATGGCTTTTTAATCTTTTCACTAGTTGAAAGAGCTTTTAGTACTCTTTCTTAGTTTGGTCTCTTGTGAAATTTCATACCATCAATCCGTGAAAATTTTAAATATAAAAAAGGAAGAAGTTAAAATATCACTCGCTACAATTTGAAAGTTACATCTAATAGGTCCTTGGATTGTAAATAGAAACTAGTAATTCCTTGAACTCTTAATTTGTGTTTAAGAGTTCAAGGAATTGTGAATTGTCTTATAGGACTCTAATCTTTCAATTTTATGTCTGGTGGATCCATGATTTTAAAAAGATACCTAAGATGTTAGGGACACGACATAATTGAAAATTCAGGAACCTATTGAAACCTTTGGAAGATCTGGACACAAAATTTAACCAAAAGAGAGAGTATTGTTTCAAGGCTCTAGTCTGGGGTTGTGCTATTCTGGTATAATTTCTTCCCAACCACCACCACCAAACGGGCGTGCACACGCTCCTCAGGCAAAAAAGGAATTAATGGGTATTGGGTAGTCTAGTATTGTCTGGATTTATTTCAGGAAATTTGCTACATTGAACACAGAGCAATTATGTTGGTCTTTCATTAAATATAGACATGTACTCGTGTGTGTGTGTGTATATATAAACCGTTTTACCATTAAAATTTCATGTCATGTTGGATCAGTAAAGCATAATTTGGTTGTCATGCATTTATTCTTTTGGAAACGGACTTGAAAACATTCTTTCCTTTTCTTTTATGGCAGGCAATATTTAGGGGAGCAATGAAAGGAAAGCTCATTGTAAATTGTCCTTTGCCCCCTGAGCGAATTCCAAAATACCAGTTATTATACAAGGATGTGTAGGAGACGAATTGGCATCTAAAGGCTTTGCTGAATTTTCCTTCCTCCTAGTTTATATCTAACTAGGTTTTCGATCATATCAGTCGATCTTGTGAAGTCCAATTTGGTGAATATCAGTCAAAGAATGACGTAAATGAATTGTGATTCAGTGAAGAATGTTGCCAAAATGCCCTCGTCATCTTTGCTGTGCACTTTAAGTATTTCAACATTTCTGGTATACGTTTGGAATTTGGTGAACAGAAGAAAAAATTGTCTGATGTTTCTTCAGCTTACCGATTGAAAATGGAACCAAATGGGGTTAAGTCGAGAAAGTTAAGGTTATGTACTTGTTCCAATGTGTGAGATTATAATTCTTCATTACCTCTTTTAATTTGTGCAACTAATTTCTCTTGTTTTAGCTTGCTAGTTTGTCAGTGAGAGATTAATCATGTGTAAAAGCACCTCCTATGTATACTTTCTTCACCGAGTTACTTGGAAGCAATAAAATGAACAATTCAAAGAGTTATCTTTCC

mRNA sequence

ATGAAGAGTTATTTAAAAAACAAGACCCTTCATATTTCTCTTCCTTCGCAAAATTTGGTCACCCATCCGGCGAATCCTTCTCATCCTTCCTTATTTGGACAAAGGGGCCAATTTGGGAGGTTCAGCTTGCTTTTCAACCGGCAACGGGAGCTCGGCGGCGTCCCTCCTCGACGATACCAGCAAACTCCGGCGGCGGTGGCGCTCACAGCAAAGGCGAATTGCAGGAAAAGGAGGATGAGCTATCTTCTAAGGACCTTAACAAAGAAGAGAGAAGTGGATTCCCTCATTAGGGACACGATCGATAAGGTTCTAATTCTCCGATTTGGGCGGTGTTCCGATTCAGTTTGTCTCCTCCATGACGACATTCTTGCTAAATGCGCACGGGAAGTATCGAAGTTTGCTTCAATAGCACTGGTTGATATTGATTCACAAGACATACAGGTTTACGTTAAGTACTTTGACATAACTCTTATACCATCCACTGTTTTCTTCTTCAATGCTCATCATATGAAGATGGATTCAGGGACTGCGGATCACACAAAGTGGATTGGTGCTTTTCATCAAAAGCAGGATTTTATTGATGTTGTGGAGGCAATATTTAGGGGAGCAATGAAAGGAAAGCTCATTGTAAATTGTCCTTTGCCCCCTGAGCGAATTCCAAAATACCAGTTATTATACAAGGATGTGTAGGAGACGAATTGGCATCTAAAGGCTTTGCTGAATTTTCCTTCCTCCTAGTTTATATCTAACTAGGTTTTCGATCATATCAGTCGATCTTGTGAAGTCCAATTTGGTGAATATCAGTCAAAGAATGACGTAAATGAATTGTGATTCAGTGAAGAATGTTGCCAAAATGCCCTCGTCATCTTTGCTGTGCACTTTAAGTATTTCAACATTTCTGGTATACGTTTGGAATTTGGTGAACAGAAGAAAAAATTGTCTGATGTTTCTTCAGCTTACCGATTGAAAATGGAACCAAATGGGGTTAAGTCGAGAAAGTTAAGGTTATGTACTTGTTCCAATGTGTGAGATTATAATTCTTCATTACCTCTTTTAATTTGTGCAACTAATTTCTCTTGTTTTAGCTTGCTAGTTTGTCAGTGAGAGATTAATCATGTGTAAAAGCACCTCCTATGTATACTTTCTTCACCGAGTTACTTGGAAGCAATAAAATGAACAATTCAAAGAGTTATCTTTCC

Coding sequence (CDS)

ATGAAGAGTTATTTAAAAAACAAGACCCTTCATATTTCTCTTCCTTCGCAAAATTTGGTCACCCATCCGGCGAATCCTTCTCATCCTTCCTTATTTGGACAAAGGGGCCAATTTGGGAGGTTCAGCTTGCTTTTCAACCGGCAACGGGAGCTCGGCGGCGTCCCTCCTCGACGATACCAGCAAACTCCGGCGGCGGTGGCGCTCACAGCAAAGGCGAATTGCAGGAAAAGGAGGATGAGCTATCTTCTAAGGACCTTAACAAAGAAGAGAGAAGTGGATTCCCTCATTAGGGACACGATCGATAAGGTTCTAATTCTCCGATTTGGGCGGTGTTCCGATTCAGTTTGTCTCCTCCATGACGACATTCTTGCTAAATGCGCACGGGAAGTATCGAAGTTTGCTTCAATAGCACTGGTTGATATTGATTCACAAGACATACAGGTTTACGTTAAGTACTTTGACATAACTCTTATACCATCCACTGTTTTCTTCTTCAATGCTCATCATATGAAGATGGATTCAGGGACTGCGGATCACACAAAGTGGATTGGTGCTTTTCATCAAAAGCAGGATTTTATTGATGTTGTGGAGGCAATATTTAGGGGAGCAATGAAAGGAAAGCTCATTGTAAATTGTCCTTTGCCCCCTGAGCGAATTCCAAAATACCAGTTATTATACAAGGATGTGTAG

Protein sequence

MKSYLKNKTLHISLPSQNLVTHPANPSHPSLFGQRGQFGRFSLLFNRQRELGGVPPRRYQQTPAAVALTAKANCRKRRMSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIALVDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEAIFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Homology
[Close]
BLAST of Clc09G09620 vs. NCBI nr
Match: XP_022152114.1 (thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-like protein 4B [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 7.1e-76
Identity = 144/151 (95.36%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLTKKREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS++IQVY+KYFDI+LIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKD+
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDL 151

[Close]
BLAST of Clc09G09620 vs. NCBI nr
Match: KAG6575968.1 (Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014491.1 Thioredoxin-like protein 4B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.9 bits (751), Expect = 1.2e-75
Identity = 144/151 (95.36%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLT KREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS++IQVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. NCBI nr
Match: XP_004139666.1 (thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745245.1 thioredoxin-like protein 4B [Cucumis sativus] >XP_031745246.1 thioredoxin-like protein 4B [Cucumis sativus] >KGN44925.2 hypothetical protein Csa_015728 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 1.6e-75
Identity = 144/151 (95.36%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLTKK EVDSLIRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFAS+AL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASVAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS++IQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQL YKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLFYKDV 151

[Close]
BLAST of Clc09G09620 vs. NCBI nr
Match: XP_022991475.1 (thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like protein 4B [Cucurbita maxima])

HSP 1 Score: 293.1 bits (749), Expect = 2.1e-75
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLT KREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS+++QVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. NCBI nr
Match: XP_038899401.1 (thioredoxin-like protein 4B [Benincasa hispida] >XP_038899402.1 thioredoxin-like protein 4B [Benincasa hispida])

HSP 1 Score: 292.4 bits (747), Expect = 3.5e-75
Identity = 143/151 (94.70%), Postives = 148/151 (98.01%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLTKKREVDSLI+DTIDKVLILRFGRCSD VCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKREVDSLIKDTIDKVLILRFGRCSDPVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS+++Q+YVKYFDITLIPSTVFFFNAHHMKMDSGT DHTKWIGAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEELQIYVKYFDITLIPSTVFFFNAHHMKMDSGTEDHTKWIGAFHQKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match: Q9NX01 (Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 6.1e-46
Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MS+LL  LT K+EVD  I+ T +KVL+LRFGR  D VCL  DDIL+K + ++SK A+I L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VD+D     VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK++G+F  KQDFID++E 
Sbjct: 61  VDVD--QTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           I+RGAM+GKLIV  P+ P+ IPKY LLY+D+
Sbjct: 121 IYRGAMRGKLIVQSPIDPKNIPKYDLLYQDI 149

[Close]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match: Q8BUH1 (Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2)

HSP 1 Score: 184.9 bits (468), Expect = 1.0e-45
Identity = 89/151 (58.94%), Postives = 116/151 (76.82%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MS+LL  LT K+EVD  I+ T +KVL+LRFGR  D VCL  DDIL+K + ++SK A+I L
Sbjct: 1   MSFLLPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSADLSKMAAIYL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VD+D     VY +YFDI+ IPSTVFFFN  HMK+D G+ DHTK++G+F  KQDFID++E 
Sbjct: 61  VDVD--HTPVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           I+RGAM+GKLIV  P+ P+ +PKY LLY+D+
Sbjct: 121 IYRGAMRGKLIVQSPIDPKNVPKYDLLYQDI 149

[Close]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match: Q9FE62 (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-16
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLL  L     VD  I    ++++++RFG   D  C+  D++LA  A  +  FA I L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 139 VDI-DSQDIQVYVKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVV 198
           VDI +  D     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 199 EAIFRGAMKGKLIVNCP 214
           E ++RGA KG+ +V  P
Sbjct: 121 ETVYRGARKGRGLVIAP 133

[Close]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match: P87215 (Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dim1 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-16
Identity = 49/135 (36.30%), Postives = 76/135 (56.30%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSY L  L     VD  I    ++++++RFGR  D  C+  D++L + A +V   A I L
Sbjct: 1   MSYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDID  ++  + K +++    + +FF+   HM +D GT ++ K       KQ+ ID++E 
Sbjct: 61  VDID--EVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIET 120

Query: 199 IFRGAMKGKLIVNCP 214
           IFRGA KGK +V  P
Sbjct: 121 IFRGARKGKGLVISP 133

[Close]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match: P83876 (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 8.5e-16
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSY+L  L    +VD  I    D+V+++RFG   D  C+  D++L   A +V  FA I L
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDI   ++  + K +++    + +FFF   H+ +D GT ++ K   A   KQ+ +D++E 
Sbjct: 61  VDI--TEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIET 120

Query: 199 IFRGAMKGKLIVNCP 214
           ++RGA KG+ +V  P
Sbjct: 121 VYRGARKGRGLVVSP 133

[Close]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match: A0A6J1DGN8 (thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.4e-76
Identity = 144/151 (95.36%), Postives = 150/151 (99.34%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLTKKREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS++IQVY+KYFDI+LIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDISLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKD+
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDL 151

[Close]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match: A0A6J1JT18 (thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 9.9e-76
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLT KREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS+++QVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEELQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match: A0A6J1GQC5 (thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-75
Identity = 143/151 (94.70%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLT KREVDS+IRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTTKREVDSIIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS++IQVY+KYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFH+KQDFIDVVEA
Sbjct: 61  VDIDSEEIQVYIKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHEKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIV+CPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVSCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match: A0A1S3BH38 (thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 142/151 (94.04%), Postives = 149/151 (98.68%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLLRTLTKK EVDSLIRDTIDKVLILRFGRCSDSVCLL DDILAKCAREVSKFASIAL
Sbjct: 1   MSYLLRTLTKKGEVDSLIRDTIDKVLILRFGRCSDSVCLLLDDILAKCAREVSKFASIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS+++QVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKW+GAFHQKQ+FIDVVEA
Sbjct: 61  VDIDSEEMQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWVGAFHQKQNFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPE+IPKYQLL+KDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPEQIPKYQLLFKDV 151

[Close]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match: A0A6P4ATD0 (thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.3e-72
Identity = 136/151 (90.07%), Postives = 146/151 (96.69%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLL TLTKKREVDS+I+DTIDKVL+LRFGR SDSVCLL DD+L+K AREVSKFA+IAL
Sbjct: 1   MSYLLNTLTKKREVDSIIKDTIDKVLVLRFGRASDSVCLLLDDVLSKSAREVSKFATIAL 60

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VDIDS+D+QVYV YFDITLIPST+FFFNAHHMKMDSGTADHTKW+GAFHQKQDFIDVVEA
Sbjct: 61  VDIDSEDVQVYVNYFDITLIPSTIFFFNAHHMKMDSGTADHTKWVGAFHQKQDFIDVVEA 120

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV
Sbjct: 121 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 151

[Close]
BLAST of Clc09G09620 vs. TAIR 10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 262.7 bits (670), Expect = 2.8e-70
Identity = 121/151 (80.13%), Postives = 140/151 (92.72%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLL+TLT K E+D +IRDTID+VL+LRFGR SD+VCL HD+ILAK  R+VSKFA +AL
Sbjct: 9   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 68

Query: 139 VDIDSQDIQVYVKYFDITLIPSTVFFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVVEA 198
           VD+DS+D+QVYVKYFDITL PST+FFFNAHHMK+DSGTADHTKW+GAFH KQDFIDVVEA
Sbjct: 69  VDVDSEDVQVYVKYFDITLFPSTIFFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVVEA 128

Query: 199 IFRGAMKGKLIVNCPLPPERIPKYQLLYKDV 230
           I+RGAMKGK+IV CP+PPERIPKYQL+YKDV
Sbjct: 129 IYRGAMKGKMIVQCPIPPERIPKYQLVYKDV 159

[Close]
BLAST of Clc09G09620 vs. TAIR 10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP )

HSP 1 Score: 87.8 bits (216), Expect = 1.2e-17
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 0 

Query: 79  MSYLLRTLTKKREVDSLIRDTIDKVLILRFGRCSDSVCLLHDDILAKCAREVSKFASIAL 138
           MSYLL  L     VD  I    ++++++RFG   D  C+  D++LA  A  +  FA I L
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 139 VDI-DSQDIQVYVKYFDITLIPSTV-FFFNAHHMKMDSGTADHTKWIGAFHQKQDFIDVV 198
           VDI +  D     + +D    PSTV FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120

Query: 199 EAIFRGAMKGKLIVNCP 214
           E ++RGA KG+ +V  P
Sbjct: 121 ETVYRGARKGRGLVIAP 133

The following BLAST results are available for this feature:
BLAST of Clc09G09620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152114.17.1e-7695.36thioredoxin-like protein 4B [Momordica charantia] >XP_022152121.1 thioredoxin-li... [more]
KAG6575968.11.2e-7595.36Thioredoxin-like protein 4B, partial [Cucurbita argyrosperma subsp. sororia] >KA... [more]
XP_004139666.11.6e-7595.36thioredoxin-like protein 4B [Cucumis sativus] >XP_011659173.1 thioredoxin-like p... [more]
XP_022991475.12.1e-7594.70thioredoxin-like protein 4B [Cucurbita maxima] >XP_022991476.1 thioredoxin-like ... [more]
XP_038899401.13.5e-7594.70thioredoxin-like protein 4B [Benincasa hispida] >XP_038899402.1 thioredoxin-like... [more]
BLAST of Clc09G09620 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9NX016.1e-4659.60Thioredoxin-like protein 4B OS=Homo sapiens OX=9606 GN=TXNL4B PE=1 SV=1[more]
Q8BUH11.0e-4558.94Thioredoxin-like protein 4B OS=Mus musculus OX=10090 GN=Txnl4b PE=2 SV=2[more]
Q9FE621.7e-1638.69Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=1 SV=1[more]
P872155.0e-1636.30Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2... [more]
P838768.5e-1634.81Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1[more]
BLAST of Clc09G09620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DGN83.4e-7695.36thioredoxin-like protein 4B OS=Momordica charantia OX=3673 GN=LOC111019903 PE=3 ... [more]
A0A6J1JT189.9e-7694.70thioredoxin-like protein 4B OS=Cucurbita maxima OX=3661 GN=LOC111488081 PE=3 SV=... [more]
A0A6J1GQC52.2e-7594.70thioredoxin-like protein 4B OS=Cucurbita moschata OX=3662 GN=LOC111456136 PE=3 S... [more]
A0A1S3BH381.4e-7494.04thioredoxin-like protein 4B OS=Cucumis melo OX=3656 GN=LOC103489754 PE=3 SV=1[more]
A0A6P4ATD01.3e-7290.07thioredoxin-like protein 4B OS=Ziziphus jujuba OX=326968 GN=LOC107426724 PE=3 SV... [more]
BLAST of Clc09G09620 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24730.12.8e-7080.13mRNA splicing factor, thioredoxin-like U5 snRNP [more]
AT5G08290.11.2e-1738.69mRNA splicing factor, thioredoxin-like U5 snRNP [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 82..216
e-value: 3.1E-75
score: 265.9
IPR004123Dim1 familyPFAMPF02966DIM1coord: 82..215
e-value: 1.2E-47
score: 161.1
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 79..228
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 79..217
e-value: 1.1E-46
score: 159.9
NoneNo IPR availablePANTHERPTHR12052:SF4THIOREDOXIN-LIKE PROTEIN 4Bcoord: 79..228
NoneNo IPR availableCDDcd02986DLPcoord: 89..203
e-value: 2.06296E-69
score: 206.606
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 85..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G09620.2Clc09G09620.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006413 translational initiation
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular_component GO:0005682 U5 snRNP
molecular_function GO:0003743 translation initiation factor activity