Clc09G09090 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G09090
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr09: 7824221 .. 7824691 (-)
RNA-Seq Expression	Clc09G09090
Synteny	Clc09G09090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCAAGCTACGTGAGAAATATGGTTTATTCAGTTGTATTATTGGGTTTGCTATTGATTCAACAACCATTCTTGTTTGCAAAAGGAGATACAGTTCCACTACCACTCCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTCTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTAGGACCTCAAACTCTAGTTACCAATGGAGCTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAGAAACATATTTGGCTACATTATAGGTGCATGAATCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTATTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCATAAGTGGGGAGAAGTCAGACCTACTATTTGA

mRNA sequence

ATGGGTTCAAGCTACGTGAGAAATATGGTTTATTCAGTTGTATTATTGGGTTTGCTATTGATTCAACAACCATTCTTGTTTGCAAAAGGAGATACAGTTCCACTACCACTCCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTCTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTAGGACCTCAAACTCTAGTTACCAATGGAGCTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAGAAACATATTTGGCTACATTATAGGTGCATGAATCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTATTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCATAAGTGGGGAGAAGTCAGACCTACTATTTGA

Coding sequence (CDS)

ATGGGTTCAAGCTACGTGAGAAATATGGTTTATTCAGTTGTATTATTGGGTTTGCTATTGATTCAACAACCATTCTTGTTTGCAAAAGGAGATACAGTTCCACTACCACTCCAAACCTGGCATGTTCATGTGGTTAATGGGCTAAAAAATGCCACTCTGCTTGTGCATTGTAAGTCCAAAGATGATGATTTAGGACCTCAAACTCTAGTTACCAATGGAGCTGAATTTCAATGGACTTTCAAGATCAACATTTGGAGAACCACTTTGTATTGGTGCTCACTACACAAGCCAAATGCTGATGTTTCATTTGATGCATTTTGGGTTGAGAAGAAACATATTTGGCTACATTATAGGTGCATGAATCAAAACTGCTTTTGGATTGCTAAAGATGACGGAATTTATTTAAGAAACAATCCTGATGGTGTTGATGAGTTTGTTCATAAGTGGGGAGAAGTCAGACCTACTATTTGA

Protein sequence

MGSSYVRNMVYSVVLLGLLLIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEVRPTI

Homology

[Close]

BLAST of Clc09G09090 vs. NCBI nr
Match: XP_038896407.1 (S-protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 3.9e-78
Identity = 135/153 (88.24%), Postives = 143/153 (93.46%), Query Frame = 0


Query: 1   MGSSYVRNMVYSVVLLGLLLIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVHCKSK 60
           MGSSY+R MV S+VLLGL+LIQQP LFAKGD VPLPLQ WHVHVVNGLKNATL VHCKSK
Sbjct: 1   MGSSYMR-MVSSLVLLGLVLIQQPLLFAKGDPVPLPLQKWHVHVVNGLKNATLFVHCKSK 60

Query: 61  DDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCM 120
           DDDLGPQ LV+NGAEFQW+FKINIWRTTLYWCSLHKPNADVSFDAFWVE++HIWLHYRCM
Sbjct: 61  DDDLGPQHLVSNGAEFQWSFKINIWRTTLYWCSLHKPNADVSFDAFWVERRHIWLHYRCM 120

Query: 121 NQNCFWIAKDDGIYLRNNPDGVDEFVHKWGEVR 154
           NQNCFW+AKDDGIYLRNNPD VDEFVHKW E R
Sbjct: 121 NQNCFWMAKDDGIYLRNNPDAVDEFVHKWDEAR 152

[Close]

BLAST of Clc09G09090 vs. NCBI nr
Match: XP_023004728.1 (S-protein homolog 1-like [Cucurbita maxima])

HSP 1 Score: 206.1 bits (523), Expect = 2.3e-49
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MGSSYV--RNMVYSVVLLGLL--LIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVH 60
           M S+Y+  R++  +  LLGLL   + QP   A G    +P+Q W VHVVN L NATL VH
Sbjct: 44  MSSTYMKKRHLKAAAFLLGLLASALTQPLAMALG---IVPIQKWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLH 120
           CKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+
Sbjct: 104 CKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           YRC  +NC W AKDDG+YLRNNPDGVDE VHKW
Sbjct: 164 YRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKW 193

[Close]

BLAST of Clc09G09090 vs. NCBI nr
Match: XP_022143645.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 201.8 bits (512), Expect = 4.2e-48
Identity = 81/113 (71.68%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 37  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK 96
           L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L K
Sbjct: 35  LPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVTRGDEFQWTFQVNFWATTLYWCYLKK 94

Query: 97  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           PNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLRNNPDGVDE +H+W
Sbjct: 95  PNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDDGIYLRNNPDGVDERIHEW 147

[Close]

BLAST of Clc09G09090 vs. NCBI nr
Match: XP_022959899.1 (S-protein homolog 1-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 94/153 (61.44%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 1   MGSSY--VRNMVYSVVLLGLL--LIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVH 60
           M S+Y   R++  +  LLGLL   + QP   A G    +P+Q W VHVVN L NATL VH
Sbjct: 44  MSSTYEKKRHLKAAAFLLGLLASALTQPLAMAIG---IVPIQNWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLH 120
           CKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+
Sbjct: 104 CKSKDDDLGFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           YRC   NC W A+DDG+YLRNNPD VDE VHKW
Sbjct: 164 YRCHGGNCIWTARDDGVYLRNNPDSVDERVHKW 193

[Close]

BLAST of Clc09G09090 vs. NCBI nr
Match: XP_023514588.1 (S-protein homolog 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.0 bits (502), Expect = 6.1e-47
Identity = 93/153 (60.78%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 1   MGSSY--VRNMVYSVVLLGLL--LIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVH 60
           M S+Y   R++  +  LLGLL   + QP   A G    +P+Q W VHVVN L NATL VH
Sbjct: 27  MSSTYEKKRHLKAAAFLLGLLASALTQPLAMAIG---IVPIQKWRVHVVNRLNNATLFVH 86

Query: 61  CKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLH 120
           CKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+
Sbjct: 87  CKSKDDDLGFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 146

Query: 121 YRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           YRC   NC W A++DG+YLRNNPD VDE VHKW
Sbjct: 147 YRCHGGNCIWTAREDGVYLRNNPDSVDERVHKW 176

[Close]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 6.0e-21
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 31  DTVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTL 90
           D +   +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T 
Sbjct: 32  DIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRN-RFSWNFGENMLHSTF 91

Query: 91  YWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           +WC ++K N  ++ + FW +   + L +RC  +NC W AK DG+YL N+  G D    KW
Sbjct: 92  FWCYMNKDNGHMNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.6e-19
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 4   SYVRNMVYSVVLLGLLLIQQPFLFAKG----DTVPLPLQTWHVHVVNGLKNA-TLLVHCK 63
           +Y++  + ++    L+L  Q  + A+     D V   +  W V V NGL    TL +HCK
Sbjct: 2   NYIKQFILAICFY-LVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCK 61

Query: 64  SKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYR 123
           SK++DLG   L      F W F  N+  +TL+WC + K +  ++   FW +   + L +R
Sbjct: 62  SKENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD---VILFHR 121

Query: 124 CMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           C  +NC W AK+DG+YL N+  G D    KW
Sbjct: 122 CDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-09
Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 42  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNAD 101
           V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN  
Sbjct: 50  VEINNDLGNQLTLLYHCKSKDDDLGNRTL-QPGESWSFSFGRQFFGRTLYFCSFSWPNES 109

Query: 102 VSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGE 152
            SFD  + + +      +C +  C W  + +G    N+     +  + W +
Sbjct: 110 HSFD-IYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNK 158

[Close]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 6   VRNMVYSVVLLGLLLIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDL 65
           ++  V+ VV+   LLI+  F   K D       +  V + N L +  TL +HCKS DDDL
Sbjct: 5   LKTQVHVVVI--YLLIKIAFSQVKTDFDVNWSTSKMVRITNRLGDGLTLNLHCKSADDDL 64

Query: 66  GPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNC 125
           G + L  NG+ + + F+ +I  TTL++C    P     FD +  ++  +  H  C+  NC
Sbjct: 65  GLKILAPNGS-WSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDRDGVRSHISCI--NC 124

Query: 126 FWIAKDDGIYLRNNPDGVDEFVHKW 150
            W     G  + +  D      + W
Sbjct: 125 IWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot
Match: Q9LW23 (S-protein homolog 22 OS=Arabidopsis thaliana OX=3702 GN=SPH22 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.9e-07
Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 0


Query: 42  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKP--- 101
           + +VN LKN  TL + C SK+D LGP T++ NG +F   F  N++ TT + C+L +    
Sbjct: 24  IRIVNELKNKKTLWMRCYSKNDVLGP-TIIPNGGQFTDYFFHNLFGTTRFMCTLKQGPGF 83

Query: 102 NADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLR 137
           +   SF AF  +   +W           W A++DGIYLR
Sbjct: 84  SHSQSFRAF--KNSGLW----------DWRAREDGIYLR 109

[Close]

BLAST of Clc09G09090 vs. ExPASy TrEMBL
Match: A0A6J1L0E8 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.1e-49
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MGSSYV--RNMVYSVVLLGLL--LIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVH 60
           M S+Y+  R++  +  LLGLL   + QP   A G    +P+Q W VHVVN L NATL VH
Sbjct: 44  MSSTYMKKRHLKAAAFLLGLLASALTQPLAMALG---IVPIQKWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLH 120
           CKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+
Sbjct: 104 CKSKDDDLGFHNLVGIGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           YRC  +NC W AKDDG+YLRNNPDGVDE VHKW
Sbjct: 164 YRCYGRNCIWTAKDDGVYLRNNPDGVDERVHKW 193

[Close]

BLAST of Clc09G09090 vs. ExPASy TrEMBL
Match: A0A6J1CPC6 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.1e-48
Identity = 81/113 (71.68%), Postives = 92/113 (81.42%), Query Frame = 0


Query: 37  LQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK 96
           L  WH+HVVNGL   TL VHCKSKDDDLG   LVT G EFQWTF++N W TTLYWC L K
Sbjct: 35  LPKWHIHVVNGLSKVTLFVHCKSKDDDLGVHNLVTRGDEFQWTFQVNFWATTLYWCYLKK 94

Query: 97  PNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           PNADVSF++FWVE+ H+WL YRC ++NC W AKDDGIYLRNNPDGVDE +H+W
Sbjct: 95  PNADVSFESFWVEQTHMWLQYRCTDKNCIWTAKDDGIYLRNNPDGVDERIHEW 147

[Close]

BLAST of Clc09G09090 vs. ExPASy TrEMBL
Match: A0A6J1H9E9 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.8e-48
Identity = 94/153 (61.44%), Postives = 110/153 (71.90%), Query Frame = 0


Query: 1   MGSSY--VRNMVYSVVLLGLL--LIQQPFLFAKGDTVPLPLQTWHVHVVNGLKNATLLVH 60
           M S+Y   R++  +  LLGLL   + QP   A G    +P+Q W VHVVN L NATL VH
Sbjct: 44  MSSTYEKKRHLKAAAFLLGLLASALTQPLAMAIG---IVPIQNWRVHVVNRLNNATLFVH 103

Query: 61  CKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLH 120
           CKSKDDDLG   LV  G+EFQW+FK N+W TTL+WC L KPNA VSF+AFW+EK HIWL+
Sbjct: 104 CKSKDDDLGFHNLVGVGSEFQWSFKNNLWATTLFWCLLRKPNAYVSFEAFWIEKTHIWLN 163

Query: 121 YRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           YRC   NC W A+DDG+YLRNNPD VDE VHKW
Sbjct: 164 YRCHGGNCIWTARDDGVYLRNNPDSVDERVHKW 193

[Close]

BLAST of Clc09G09090 vs. ExPASy TrEMBL
Match: A0A6J1DPJ1 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.3e-46
Identity = 82/118 (69.49%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 33  VPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYW 92
           +P+PL  W++HVVNGL  NATL VHCKSKDDDLG   L+  G E QWTF+IN W+TTLYW
Sbjct: 22  LPMPLDKWNIHVVNGLSNNATLFVHCKSKDDDLGYHHLIGRGDELQWTFRINFWKTTLYW 81

Query: 93  CSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           C +HKPNADVSFD+FWVEK HIWL YRC +  C W AKDDGIYLRN P+  DE VHKW
Sbjct: 82  CFMHKPNADVSFDSFWVEKTHIWLTYRCKDGICIWTAKDDGIYLRNIPNNDDELVHKW 139

[Close]

BLAST of Clc09G09090 vs. ExPASy TrEMBL
Match: A0A1S3CEQ0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.6e-45
Identity = 85/143 (59.44%), Postives = 102/143 (71.33%), Query Frame = 0


Query: 11  YSVVLLGLLLIQQPFLFAKGDT-VPLPLQTWHVHVVNGLKNATLLVHCKSKDDDLGPQTL 70
           Y  + + LLL+    +  +  T VPLPL  WH+HVVNGL+N TL VHCKSKDDDLG  TL
Sbjct: 5   YMQLAMPLLLVLVAVVLVQPSTAVPLPLPKWHIHVVNGLRNQTLFVHCKSKDDDLGNHTL 64

Query: 71  VTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAK 130
            T G E QWTFK+N + TTL+WC L KPN  V+F++FWVEK H WL  RC ++NC WIAK
Sbjct: 65  STKGQEVQWTFKVNFFGTTLFWCYLKKPNFYVAFESFWVEKTHPWLTSRCFDKNCIWIAK 124

Query: 131 DDGIYLRNNPDGVDEFVHKWGEV 153
           DDGIYLRNN   VDE VH W ++
Sbjct: 125 DDGIYLRNNLTNVDELVHPWNKM 147

[Close]

BLAST of Clc09G09090 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-22
Identity = 48/120 (40.00%), Postives = 66/120 (55.00%), Query Frame = 0


Query: 31  DTVPLPLQTWHVHVVNGLKNA-TLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTL 90
           D +   +  W V VVNGL    TL +HCKSK+DDLG   L      F W F  N+  +T 
Sbjct: 32  DIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRN-RFSWNFGENMLHSTF 91

Query: 91  YWCSLHKPNADVSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           +WC ++K N  ++ + FW +   + L +RC  +NC W AK DG+YL N+  G D    KW
Sbjct: 92  FWCYMNKDNGHMNVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Clc09G09090 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 94.7 bits (234), Expect = 6.8e-20
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 0


Query: 4   SYVRNMVYSVVLLGLLLIQQPFLFAKG----DTVPLPLQTWHVHVVNGLKNA-TLLVHCK 63
           +Y++  + ++    L+L  Q  + A+     D V   +  W V V NGL    TL +HCK
Sbjct: 2   NYIKQFILAICFY-LVLTCQDHVLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCK 61

Query: 64  SKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNADVSFDAFWVEKKHIWLHYR 123
           SK++DLG   L      F W F  N+  +TL+WC + K +  ++   FW +   + L +R
Sbjct: 62  SKENDLGDINLKFLD-RFSWNFGENMLHSTLFWCYMSKDDGHMNVKVFWDD---VILFHR 121

Query: 124 CMNQNCFWIAKDDGIYLRNNPDGVDEFVHKW 150
           C  +NC W AK+DG+YL N+  G D    KW
Sbjct: 122 CDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Clc09G09090 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 46  NGLKNATLL-VHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHK-PNADVSF 105
           N L+++ LL VHC+SKDDDLG + ++  G ++++TF  NIW+TT + C + + PN     
Sbjct: 33  NQLEHSKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHL 92

Query: 106 DAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGV 143
           D  +V  +  W   + +  +C WI ++DGIY   + DGV
Sbjct: 93  D--FVAYETSW--SKALEASCKWIGREDGIYF--SQDGV 124

[Close]

BLAST of Clc09G09090 vs. TAIR 10
Match: AT4G10895.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 7.5e-11
Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 25  FLFAKGDTVPLPLQTWHVHVVNGL-KNATLLVHCKSKDDDLGPQTLVTNGAEFQWTFK-- 84
           FL  + D++ L  + +++ + N L  N  L+V C+S     G ++       F   FK  
Sbjct: 14  FLIQRTDSI-LTFRRFNIEISNQLGGNNKLMVQCRS-----GQESTRVVFLAFSDVFKAP 73

Query: 85  INIWRTTLYWCSLHKP---NADVSFDAFWVEKKHIWLHYRC--MNQN-CFWIAKDDGIYL 144
           + I   TL WC+L K       VSFDAF    K  ++H  C  M  N CFW  +DDG++ 
Sbjct: 74  LRIGFKTLIWCTLWKGPDFKHHVSFDAF--VGKESFIHDVCGSMKPNICFWQVQDDGVWA 133

Query: 145 RNNPDGVDEFVHKWGE 152
           RNNP G  + ++KW +
Sbjct: 134 RNNPTGALKLMYKWNK 141

[Close]

BLAST of Clc09G09090 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 42  VHVVNGLKN-ATLLVHCKSKDDDLGPQTLVTNGAEFQWTFKINIWRTTLYWCSLHKPNAD 101
           V + N L N  TLL HCKSKDDDLG +TL   G  + ++F    +  TLY+CS   PN  
Sbjct: 50  VEINNDLGNQLTLLYHCKSKDDDLGNRTL-QPGESWSFSFGRQFFGRTLYFCSFSWPNES 109

Query: 102 VSFDAFWVEKKHIWLHYRCMNQNCFWIAKDDGIYLRNNPDGVDEFVHKWGE 152
            SFD  + + +      +C +  C W  + +G    N+     +  + W +
Sbjct: 110 HSFD-IYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPWNK 158

The following BLAST results are available for this feature:

BLAST of Clc09G09090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896407.1	3.9e-78	88.24	S-protein homolog 1-like [Benincasa hispida]	[more]
XP_023004728.1	2.3e-49	62.75	S-protein homolog 1-like [Cucurbita maxima]	[more]
XP_022143645.1	4.2e-48	71.68	S-protein homolog 1-like [Momordica charantia]	[more]
XP_022959899.1	1.6e-47	61.44	S-protein homolog 1-like [Cucurbita moschata]	[more]
XP_023514588.1	6.1e-47	60.78	S-protein homolog 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc09G09090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	6.0e-21	40.00	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	9.6e-19	34.44	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	3.1e-09	33.33	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	1.5e-08	29.66	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
Q9LW23	2.9e-07	37.37	S-protein homolog 22 OS=Arabidopsis thaliana OX=3702 GN=SPH22 PE=3 SV=1	[more]

BLAST of Clc09G09090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0E8	1.1e-49	62.75	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111497942 PE=3 SV=1	[more]
A0A6J1CPC6	2.1e-48	71.68	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013506 PE=3 SV=1	[more]
A0A6J1H9E9	7.8e-48	61.44	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111460817 PE=3 SV=1	[more]
A0A6J1DPJ1	3.3e-46	69.49	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111022329 PE=3 SV=1	[more]
A0A1S3CEQ0	3.6e-45	59.44	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1	[more]

BLAST of Clc09G09090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	4.3e-22	40.00	S-protein homologue 1	[more]
AT4G29035.1	6.8e-20	34.44	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.0e-11	38.38	Plant self-incompatibility protein S1 family	[more]
AT4G10895.1	7.5e-11	33.82	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	2.2e-10	33.33	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 41..149 e-value: 1.6E-25 score: 89.7
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 35..135
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 35..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G09090.2	Clc09G09090.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane