Clc09G09020 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G09020
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Location	ClcChr09: 7767494 .. 7771557 (-)
RNA-Seq Expression	Clc09G09020
Synteny	Clc09G09020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAATTAAAACTTTCGAGATGAAAATAATATTTTAACATTAATATTTTGATTAGAGGCTGATGACTGAAAGTGACGCCTTCTTTCCATAGTTTTGATATTCATATGTTCGATCATATAACATTTGGCGTCGGATGTTCTCTAAAGCTGGAATGGATTCATCAGCTCCAAAAGCCCTAAATTCTGACACTTCTTCTCCTTCTTCTTCTCCTTCAAACTATGGCGATTGGAAGGAACGTATCTTCTTTCCCACTCTTCTCGCAGGTCTGTATCTGTTTCTTCAAAATTTCATATTTTTCTCCGTAAGCTTCGAATGGGTTGGATCTATGAATAATTTTTTGAACTTGGCTATATAAGTCGCATTTTTAATTCACCTCCCTGCTTCTAATGTTTATCTCAAGAACGACCTACAAACTATGTACATATATTCTCTTTTCTTCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCGGCGACTTATGCTACTAATTTGTCAATTGTCGCTGCTTGCTACTGCGGTAATTATTTTGTTTCTTAATGTTCAGAATTTTTGCTTATTGAAGCTTCTCTTGTGATTGGATTTGTTGGATGTTTTTTTTTTTTTTTGAAAGGAGATTTGTTGGATGTTATTGTAATTGTGAAGTCGATAGCTAATCAAAGGAAAATAAGGGCATTAACAACAACTAGTGATGACAATTTGAAAATCTTGTTGGCTTGGTTTTGTCCTTTTGCTTGATGATGGTTGGATCAAAATAGGAAGTTTCATTTGGAGCAGATTAGTCAAGTTTCATTCTCTTCAAGAGTCAAAAAACTTTCATGAATGATTCTACGTGGCATCAGTGTGGTGACTTTTTGAAGTCGTGTTCGAAGCTCAAGTCTTCAACTTATTGTGGAAGAGATGGAATACGGCTTTTTGTTTCATGAGAGCAAGGGAGAAATATGGGGGTGGAGTTTGGGCATTAATTCAGTGATACATACTTTTCCTAAATTGAGGAATAAGGATTCTATTCAAAGGAACACCGAACACGTTTGGTTTTGGAACACGTTATGGGGTTGGGTTAGTTTATTATTATCAGGTGACCCAAACAAGTGACGTGATTTTGGCATGTGACTGTGTATCTTTTCCAATCCTATGGCACAAGGCAGCATGAGGCCCATAGCTATCGTCTTGCATGAAGTACTGACAAGCCTTGCAGCATGGTGCTCGCCATTATGTGCTGTTATGCATCCACACCATTGTTGAATAATGGTGATAAGCTCCTTAGAGAGAATAGCTGGCTGATGGATGAAGGCAGAGAGGTGTAAGCAACGGAAAGTAAACTACTAGTTTTCAAATTGCCCAAGGCAGGGAGATGTAAGCCAAGAAGAATAAATTCCTATTCGTCGAACAGCCTTGGTTTCCTATTCTTCTGTCTCGTAGCCACCATTGAAGCTTGAGGCACAACACAAAAGGGAGATAGGCCTTTCCTTTTGACCATCGTTCAAGTATCATCAGCTCCTTCTCAATTCCATAAGATTTCTTCTTTAGATTGATTTAGAGAGGTGTGATGGCTTCTTTTTGCTGTTTTCTTCTAATTTTTGTTTGATATTTGCTTTTCACAGCCTCAGGGCTATATCGACAATTTCCCCTTAATGATTCTCACAATGACAACATACTCATCTCGTGTCTTCTTCGCCTCCTTTTCTTCTTTTCATCTTATTATTTTATTTAAGTAATGCTTCTTTTTTTATATATGTTCTTCCTTTTTTTAAGCATTTAGTTTTCTTCTTAAATTTTAAACATTACTGTTTATGTTTAAATAAAATAAAATTTCCTCCCTTTTTCTAGGTTTTCTTTGTTTTCAATATTTCAATCATCTTTTGGGTTTTTCTTTTCTAATGTTTGTGGGATCTAACAGAATTTGGTTGCTACGTTAATGACATGTTGATGTTAAGGTTTTGACATTTTATGACTATATATGTATTGATTATTTTACCTCTAATTTATTAAACTACGCCTCACTTCACTCAGGCAATAAGCTTTTTTTTTTCTTTTCCTTTTTTCTTCCGTCTCTTGCACTGAGTCGATCAAGAGACTTGTCATCTTGGACTGCATCTTGCACTTGGTAAACATTAGTTATAGTAAAGAAATTAGTAACATTTCTTTGGAGACTTGAAATAAAATGTAGATACTTGCATAGATCTCCTCATTGAGGCTTGTTGATTGAGATAAATATCATATAGATTTTTAAGCTATTCTACGATTTTTCATTACATAGATTTATTTGAACTGTGGATGGATTTGTCCAGCCTCCCGTGGATTGAGGGACATCATTTGCTAACTTTTGTTAGAGCATCTTTTCACCTTTCTCCTAGAAAGGTAGGTTCAGCCACAATATATATCTGCTATTCATAGTAGACCATTGAGGTGATCTTTTTCATACTATGAATCTGAAACCTAGAGTGTCATACGGCCATTCTATTCAGAAGACCTCCGAATATGTTACTCCATGGCAATGCCACCTTTACTTTTCAACCACCAAGTCGTTGTTAGATGAAGTGCTTTTGTGTTTTGAGTTATGCCACTTGAACCACAATCCATTAAAATTTTCTTTTCTTTAACACATGTCCGAGTACTAGTTAGAGCTGAGATTGTAACTTAAACTTTTAATTTTCTATTATCATGAACTAGTTATTTCTAGTGAAGATTTTCTTGAATTGAGCCGCCAAGATTCAAGTTAAATCATGGTGGAACTTGATGTGATTTTTCATTTGAAGGAAAATTCTAAGGATTTAGGATGGGTGTACACTTAATCATACCATAGCATTCTGTCACTCTTCATCATGGATGCTAAAAGTTCTTTACACAGTTCTTTTGTCATTAACACTTCACAAATTGAACAGGTGCACGTGAGTTTGTCAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGTTTTGGAACTGGAGCTCTTCTTGGACGCCTTCAAGGTTAACCAACTTTACAGCTCTCACTCACATAAACAGATGCAAGTCTATTATTATCTAGGACCTAACTACTGTTTTGAACTTTTCTCTATGATTCTATAGTAATATTGTGCATCATCTTTGATAACTTGAAATTAAGCTAATTTCTGGATGAGTTATAACAAAAGTCCAGTTATTATTTTTCGTTCTGTCTATTACGAATCAGTTTCCTGGATAGGAATGAGTCAGAGAAAAGGTAAACAAAAGGATGTTACATAATTTGATGGTGTTGAGAATTTTTCTATATACCTGAGTGACCATGAGTTAGAGGGAGAGCCTTGTGTAGGTTGAAATAGAACTGATTCCTAGGAAACTTAACCACTGGTGAAGAGATCATGCTTCTTAAAGTAATAGGTTGTACAAAAACGAGTAGAGATGAAATGCTGCAAATAAATTGTGATCTGTGAAGCCAAAGTTCAAATATTGTGAATCTACTGTAAACAATTACATTCTCTTGGACTTGCTAGGTGGTCGGCTCGGTTCTGTTCGATACTCGTTGATCTTCACCGTTGTTGGGACAGCAGTAGATTATGGCACACTTAAACTAAAACCCGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAGGAAGCTTTAGCTGCTAAAGAAGCTCGAGAACAACAGCTCTACGCACAGCGGGCACTTGGGCAATTAAACAAAAAAGATCCTTGAGACATTTTATTTTCCCCATTGATCATGGAAGAAATGATCTGAAGTTTTTGTTTTTTTATTATACCATATGATGGGGACTAGTGATAATAAGAAGAGAATGCTGATATTTGTCGTTTTTGTTTTTCTTCTTGCTGGTGCTGCATTCTATTTTTCTTTCTTGTATTTACAAATTTTCTTTATAATCTAAATGTTGCCCAAATTCATGTTCAATTTCATAATTATATTTCATAAAATGATTAACATGTCTCATGATCATAACATAAAGTGTTATAGTT

mRNA sequence

AAGAAATTAAAACTTTCGAGATGAAAATAATATTTTAACATTAATATTTTGATTAGAGGCTGATGACTGAAAGTGACGCCTTCTTTCCATAGTTTTGATATTCATATGTTCGATCATATAACATTTGGCGTCGGATGTTCTCTAAAGCTGGAATGGATTCATCAGCTCCAAAAGCCCTAAATTCTGACACTTCTTCTCCTTCTTCTTCTCCTTCAAACTATGGCGATTGGAAGGAACGTATCTTCTTTCCCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCGGCGACTTATGCTACTAATTTGTCAATTGTCGCTGCTTGCTACTGCGGTGCACGTGAGTTTGTCAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGTTTTGGAACTGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGTTCTGTTCGATACTCGTTGATCTTCACCGTTGTTGGGACAGCAGTAGATTATGGCACACTTAAACTAAAACCCGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAGGAAGCTTTAGCTGCTAAAGAAGCTCGAGAACAACAGCTCTACGCACAGCGGGCACTTGGGCAATTAAACAAAAAAGATCCTTGAGACATTTTATTTTCCCCATTGATCATGGAAGAAATGATCTGAAGTTTTTGTTTTTTTATTATACCATATGATGGGGACTAGTGATAATAAGAAGAGAATGCTGATATTTGTCGTTTTTGTTTTTCTTCTTGCTGGTGCTGCATTCTATTTTTCTTTCTTGTATTTACAAATTTTCTTTATAATCTAAATGTTGCCCAAATTCATGTTCAATTTCATAATTATATTTCATAAAATGATTAACATGTCTCATGATCATAACATAAAGTGTTATAGTT

Coding sequence (CDS)

ATGTTCTCTAAAGCTGGAATGGATTCATCAGCTCCAAAAGCCCTAAATTCTGACACTTCTTCTCCTTCTTCTTCTCCTTCAAACTATGGCGATTGGAAGGAACGTATCTTCTTTCCCACTCTTCTCGCAGGGTTTGTTGGGGGAGGAGCTGGGCTAGTGTCCAAGTATCGGAAAGTTCATGGCCTCGCTAACATTTCGGCGACTTATGCTACTAATTTGTCAATTGTCGCTGCTTGCTACTGCGGTGCACGTGAGTTTGTCAGAGTTTCTCGAAGGTCAGAACCTGATGATCTTATGAACTCTGCAATAGCAGGTTTTGGAACTGGAGCTCTTCTTGGACGCCTTCAAGGTGGTCGGCTCGGTTCTGTTCGATACTCGTTGATCTTCACCGTTGTTGGGACAGCAGTAGATTATGGCACACTTAAACTAAAACCCGTTTTAAGAAGCTACAAAGAATCGATAATTGAAGAAAGTAGTAGCTGGATGAAATTACCAGAATGGTCCCCTATTCAAGTTCTTGATGAGGAAGCTTTAGCTGCTAAAGAAGCTCGAGAACAACAGCTCTACGCACAGCGGGCACTTGGGCAATTAAACAAAAAAGATCCTTGA

Protein sequence

MFSKAGMDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQLYAQRALGQLNKKDP

Homology

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BLAST of Clc09G09020 vs. NCBI nr
Match: XP_038896923.1 (uncharacterized protein LOC120085132 [Benincasa hispida])

HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94
Identity = 185/199 (92.96%), Postives = 189/199 (94.97%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSSP---SSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLA 66
           MDSS PKAL+SDT SP   SSS SNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLA
Sbjct: 1   MDSSGPKALDSDTPSPSPSSSSSSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLA 60

Query: 67  NISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSV 126
           NISATYATNLSIVA CYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGG+LGSV
Sbjct: 61  NISATYATNLSIVAGCYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSV 120

Query: 127 RYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEA 186
           RYSLIFTVVGT VDY TLKLKPVLRSYKESI EESSSWMKLPEWSPI+VLDEEALAAK+A
Sbjct: 121 RYSLIFTVVGTTVDYATLKLKPVLRSYKESIFEESSSWMKLPEWSPIKVLDEEALAAKQA 180

Query: 187 REQQLYAQRALGQLNKKDP 203
           REQQLYAQRALGQLNKKDP
Sbjct: 181 REQQLYAQRALGQLNKKDP 199

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BLAST of Clc09G09020 vs. NCBI nr
Match: KAG6593015.1 (hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348.2 bits (892), Expect = 4.7e-92
Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MFSKAGMDSSAPKALNSDT----SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKY 60
           M S+A MDS  PK L+SDT    SS SSS SNYGDWKERI FPT+LAGF+GGGAGLVSK+
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSSSSNYGDWKERIIFPTILAGFIGGGAGLVSKH 60

Query: 61  RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ 120
           RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ
Sbjct: 61  RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQ 120

Query: 121 GGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEE 180
           GGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLDEE
Sbjct: 121 GGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLDEE 180

Query: 181 ALAAKEAREQQLYAQRALGQLNKKDP 203
           ALAAK+AREQQLYAQR LGQ+N+KDP
Sbjct: 181 ALAAKQAREQQLYAQRVLGQVNEKDP 206

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BLAST of Clc09G09020 vs. NCBI nr
Match: XP_022960027.1 (uncharacterized protein LOC111460899 [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 178/208 (85.58%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVS 60
           M S+A MDS  PK L+SDT      SS  SS SNYGDWKERI FPT+LAGFVGGGAGLVS
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSFSSSSNYGDWKERIIFPTILAGFVGGGAGLVS 60

Query: 61  KYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120
           K+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR
Sbjct: 61  KHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120

Query: 121 LQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLD 180
           LQGGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLD
Sbjct: 121 LQGGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLD 180

Query: 181 EEALAAKEAREQQLYAQRALGQLNKKDP 203
           EEALAAK+AREQQLYAQR LGQ+NKKDP
Sbjct: 181 EEALAAKQAREQQLYAQRVLGQVNKKDP 208

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BLAST of Clc09G09020 vs. NCBI nr
Match: XP_008458054.1 (PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo] >KAA0026138.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Cucumis melo var. makuwa] >TYK11598.1 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-90
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANIS 66
           MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 67  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYS 126
           ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGG+LGSVRYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 127 LIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQ 186
           LIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 187 QLYAQRALGQLNKKDP 203
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

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BLAST of Clc09G09020 vs. NCBI nr
Match: XP_004149781.1 (uncharacterized protein LOC101211202 [Cucumis sativus] >KGN44634.1 hypothetical protein Csa_015688 [Cucumis sativus])

HSP 1 Score: 337.8 bits (865), Expect = 6.4e-89
Identity = 175/197 (88.83%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANI 66
           MDS  PK  NSDT    SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANI
Sbjct: 1   MDSPDPKTPNSDTPPFSSSTSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANI 60

Query: 67  SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY 126
           SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY
Sbjct: 61  SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY 120

Query: 127 SLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEARE 186
           SL+FT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+ARE
Sbjct: 121 SLMFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQARE 180

Query: 187 QQLYAQRALGQLNKKDP 203
           QQLYAQRALGQLNKKDP
Sbjct: 181 QQLYAQRALGQLNKKDP 197

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BLAST of Clc09G09020 vs. ExPASy TrEMBL
Match: A0A6J1H677 (uncharacterized protein LOC111460899 OS=Cucurbita moschata OX=3662 GN=LOC111460899 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.1e-92
Identity = 178/208 (85.58%), Postives = 189/208 (90.87%), Query Frame = 0


Query: 1   MFSKAGMDSSAPKALNSDT------SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVS 60
           M S+A MDS  PK L+SDT      SS  SS SNYGDWKERI FPT+LAGFVGGGAGLVS
Sbjct: 1   MLSEAAMDSGGPKTLDSDTPLSSSSSSSFSSSSNYGDWKERIIFPTILAGFVGGGAGLVS 60

Query: 61  KYRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120
           K+RKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR
Sbjct: 61  KHRKVHGLANISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGR 120

Query: 121 LQGGRLGSVRYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLD 180
           LQGGRLGSVRYS++FTV GTA+DY TLKLKPV RSYKE+I+EESSSWMKLPEWSPIQVLD
Sbjct: 121 LQGGRLGSVRYSIMFTVAGTAIDYATLKLKPVFRSYKETILEESSSWMKLPEWSPIQVLD 180

Query: 181 EEALAAKEAREQQLYAQRALGQLNKKDP 203
           EEALAAK+AREQQLYAQR LGQ+NKKDP
Sbjct: 181 EEALAAKQAREQQLYAQRVLGQVNKKDP 208

[Close]

BLAST of Clc09G09020 vs. ExPASy TrEMBL
Match: A0A5A7SIX7 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold263G00420 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.8e-90
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANIS 66
           MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 67  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYS 126
           ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGG+LGSVRYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 127 LIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQ 186
           LIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 187 QLYAQRALGQLNKKDP 203
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

[Close]

BLAST of Clc09G09020 vs. ExPASy TrEMBL
Match: A0A1S3C726 (uncharacterized protein LOC103497594 OS=Cucumis melo OX=3656 GN=LOC103497594 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.8e-90
Identity = 174/196 (88.78%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANIS 66
           MDS  PK  NSDT   SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRK+HGLANIS
Sbjct: 1   MDSPDPKTPNSDTPFSSSTSSDYGGWKERIFYPTLLAGLVGGGAGLLSKYRKIHGLANIS 60

Query: 67  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYS 126
           ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGG+LGSVRYS
Sbjct: 61  ATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGQLGSVRYS 120

Query: 127 LIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQ 186
           LIFT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+AREQ
Sbjct: 121 LIFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQAREQ 180

Query: 187 QLYAQRALGQLNKKDP 203
           QLYAQRALGQLNKKDP
Sbjct: 181 QLYAQRALGQLNKKDP 196

[Close]

BLAST of Clc09G09020 vs. ExPASy TrEMBL
Match: A0A0A0K6T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352470 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.1e-89
Identity = 175/197 (88.83%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 7   MDSSAPKALNSDTSS-PSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANI 66
           MDS  PK  NSDT    SS+ S+YG WKERIF+PTLLAG VGGGAGL+SKYRKVHGLANI
Sbjct: 1   MDSPDPKTPNSDTPPFSSSTSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANI 60

Query: 67  SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY 126
           SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY
Sbjct: 61  SATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRY 120

Query: 127 SLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEARE 186
           SL+FT+VGT VDY TLKLKP LRSYKESIIE SSSWMKLPEWSPIQVLDEEALAAK+ARE
Sbjct: 121 SLMFTIVGTTVDYATLKLKPTLRSYKESIIEGSSSWMKLPEWSPIQVLDEEALAAKQARE 180

Query: 187 QQLYAQRALGQLNKKDP 203
           QQLYAQRALGQLNKKDP
Sbjct: 181 QQLYAQRALGQLNKKDP 197

[Close]

BLAST of Clc09G09020 vs. ExPASy TrEMBL
Match: A0A6J1DTZ3 (uncharacterized protein LOC111023975 OS=Momordica charantia OX=3673 GN=LOC111023975 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.2e-87
Identity = 168/199 (84.42%), Postives = 180/199 (90.45%), Query Frame = 0


Query: 7   MDSSAPKALNSDT---SSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLA 66
           MDS  PK L+S+T   SS SSS SNYGDWK+RIFFPTLLAGFVGGGAGLVSKYRKVHGLA
Sbjct: 1   MDSETPKTLDSETPSSSSSSSSSSNYGDWKQRIFFPTLLAGFVGGGAGLVSKYRKVHGLA 60

Query: 67  NISATYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSV 126
           NISATYA NLSIV ACYCGAREFVRV R+SEPDDLMNSAIAGFGTGA+LGRLQGG+LGSV
Sbjct: 61  NISATYAANLSIVTACYCGAREFVRVYRKSEPDDLMNSAIAGFGTGAILGRLQGGQLGSV 120

Query: 127 RYSLIFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEA 186
           RYSL+FTVVGT  DY TLKL+P  RSYKES+ EES +WMKLPEWSPIQVLDEEALAAK+A
Sbjct: 121 RYSLMFTVVGTTFDYATLKLRPTFRSYKESVFEESRNWMKLPEWSPIQVLDEEALAAKQA 180

Query: 187 REQQLYAQRALGQLNKKDP 203
           REQQLYAQR LGQLNKK+P
Sbjct: 181 REQQLYAQRTLGQLNKKEP 199

[Close]

BLAST of Clc09G09020 vs. TAIR 10
Match: AT3G25120.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-51
Identity = 107/193 (55.44%), Postives = 134/193 (69.43%), Query Frame = 0


Query: 8   DSSAPKALNSDTSSPSSSPSNYGDWKERIFFPTLLAGFVGGGAGLVSKYRKVHGLANISA 67
           D  +P+  N   S P+      G   +R+   +LLAG +GGGAGLVSK+R  H   NI  
Sbjct: 5   DRKSPEQTNQALSPPTPIVQENGTPTKRVLITSLLAGVIGGGAGLVSKHRIAH--PNIPT 64

Query: 68  TYATNLSIVAACYCGAREFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQGGRLGSVRYSL 127
            YA N +IVA CYCGARE VR++RRSE DDLMNSAI G  +GALLGRLQGG  G++RYSL
Sbjct: 65  VYAANFAIVAGCYCGARESVRITRRSEHDDLMNSAIGGLFSGALLGRLQGGPKGAIRYSL 124

Query: 128 IFTVVGTAVDYGTLKLKPVLRSYKESIIEESSSWMKLPEWSPIQVLDEEALAAKEAREQQ 187
           +F  VGTA DY TLK KP+L SY+      +    KLPEWSPI+VLDEEALA K+A E++
Sbjct: 125 VFAAVGTAFDYATLKGKPMLESYR------NMESFKLPEWSPIKVLDEEALAKKKAHEEK 184

Query: 188 LYAQRALGQLNKK 201
           ++ +R LG+LNK+
Sbjct: 185 IFPERVLGKLNKE 189

The following BLAST results are available for this feature:

BLAST of Clc09G09020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896923.1	1.0e-94	92.96	uncharacterized protein LOC120085132 [Benincasa hispida]	[more]
KAG6593015.1	4.7e-92	85.92	hypothetical protein SDJN03_12491, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022960027.1	1.1e-91	85.58	uncharacterized protein LOC111460899 [Cucurbita moschata]	[more]
XP_008458054.1	5.8e-90	88.78	PREDICTED: uncharacterized protein LOC103497594 [Cucumis melo] >KAA0026138.1 mit...	[more]
XP_004149781.1	6.4e-89	88.83	uncharacterized protein LOC101211202 [Cucumis sativus] >KGN44634.1 hypothetical ...	[more]

BLAST of Clc09G09020 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G09020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H677	5.1e-92	85.58	uncharacterized protein LOC111460899 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A5A7SIX7	2.8e-90	88.78	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
A0A1S3C726	2.8e-90	88.78	uncharacterized protein LOC103497594 OS=Cucumis melo OX=3656 GN=LOC103497594 PE=...	[more]
A0A0A0K6T5	3.1e-89	88.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G352470 PE=4 SV=1	[more]
A0A6J1DTZ3	2.2e-87	84.42	uncharacterized protein LOC111023975 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Clc09G09020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25120.1	3.3e-51	55.44	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR14110:SF10	OSJNBB0006N15.9 PROTEIN	coord: 15..201
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 15..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G09020.1	Clc09G09020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
biological_process	GO:0071806	protein transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex
molecular_function	GO:0030943	mitochondrion targeting sequence binding
molecular_function	GO:0008320	protein transmembrane transporter activity