Clc09G08530 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G08530
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic
Location	ClcChr09: 7178180 .. 7189191 (-)
RNA-Seq Expression	Clc09G08530
Synteny	Clc09G08530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAACACAACTCAAGGAACACGAATCCCCTCTATAGAAGTCCAAAACTATCTAGAACAACAGACGAAAACATTCACACACCTTGATTAACAATTTGAAGTAGCCTTGAAGATTACACTTTCTAAATATGATAAATAACAACATATTGGGATAGACCTTCCGCTGCACCTGATTGTCTCAAGACTAACTTTATACTACTAAAATTGTTCGTATTAAAATGATAAATTCAGTCAAGTTTCGTGTCCAATGAGATGAGAGGACCAAAAAACCATAAAATTACATCCAAACTTTAACTAACCAGTGATGGAACAAAGTATTTCCCAATCCTGTGCACTAGTAGCACTTCAAATTTCGAACTTCATACTTCATACTTCACCCAATTAAAAACGGACAAACCTTAAAACCTAAAGATCCCAAGCTAAAACCCAGCCAGATTCTCAATTGAGCAACCAATTCAAGAAGATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGCTCATACGGGTTACCCACAAATCCAAAACCAACTTCCCTGTTTTTCATTAACAATCCTACCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATCCTGCACCAGTTATGAAGTCGGTGGAGGTTATCCAGAGGAAGAGTTGGATATGCAAGATAGAAGACGACCCATAAAAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGGGGCGACCAAGTCACCTCTGTTCTCGAAGAGATGATTGTCCTCGTAAGTTCTTTCTAATTGCCCTTGTTCATATATTCTCTTTCTGGTTTAATTGAACAGACAAATAGAGTTTTCTGGATGGTCCCAGACTAAGAATCGAAAGCTTTTATAGTAATGTAGAGCTGAAACCCAGCTCACTGATGGGTCAATATGAGAGGAGAGGATTGCTTAGCTAGTATACAAATTACATGTGTCAACTGTTACATTAGTGTACAGGTGATGTGTGATACTTGGTGTCCTCTGAGAGAGTGCCTTTGATGTCCTGAACTATTCGTTTACATGCTTTCCAATGTTACTTGTTGATACTGAAAAATGGTTCAACAGTGAATTTGTATTATTGGGGGAAAAGGAGAACCAATGCCCTACAAGACAAAGACCGGTGTGGTGTCAAGCTACATATACTTCAGCCCTCAAGTTAGACTCGAGTTAGTAAAAAGGTTTAATGAATAGGTTGGTAGAGTTCAACGTGCATTTCATGGTTCACACTCCTTTGCTTATGTAGAAACTCTCTTCCGTAACCGAAGTATAGACTCATTACTCTTGTAACGAAAACCTTTTGGAACTCGAGAGCAGTTACAGGTCACACCATGATTCAAGTGGTTACATAATCATGGCCTCCACAAACTTGGGACTTAACTCAGCCTTTAAGGACTTATCCCATCATTCTCACCCTAGGCCATCTTGAATTAGCCTTAGCCTGGTCTTGGACAAGCTGTCCAGGATCTCCACCCAACTACTTGTAGGATCAACTGAGGAAGGTAAGCTCGACTCCTAGCTTTGTTAAACAACTTTGGCCGACCCATACACGGGTCACTCAAATTGGGCATTGGTTGATCCCTACATGGGTTTGCCACTCTAAGGCCCTTGCCTACCCATTTACGGGTGAGCCACCTAGGCCTTAGCCTACCCATATATAGGTCGTCCTCATGAACCTGGATCCTTTTGCTATTAGGCCCAGGTCTTGGGCCTAACCTACTTGAGGAAACTCTCCCACAACATTACTCAATGGGAGAGGATGTCTATTGACTCGGTTTGAGTTTGTTAATTGAAACAGAGAGCTGGGTCTCTAATGGTTAAGTTTGGAAGATCTCTCAAGATAAACTATCATGGATTGACCTAGTGGTAAAAAAGAAAACATAATCTCAATAAATGGCTAAGAGGTCATGAGTTCAAGGGAGAATTGCACAAAGGGCCCCTTTATTGGGACCCAAATTAAAATTAACCCAAATTTGAAAACCAATGAATTTTGGCCCCTTGCTTATGTCAGCACCATGAGAAATTACCACTTCGACCCAAATGCATTTCTTCCTTCTTTTTTTTCATTCTGCATCTGCTCGATTTAGAAAAAAGGTCTGCACCTTTTTTTTCCTTCATTCGTCCTTTTTTCTTCTTCTTCGTTTTGTAGCTTTTTTCTCTCCCTTCTTTGTTCTGCATTTTTTCTCAAAGAAAGAAATTGCAGTTGTGTCTGATGAGGAACTAGAGGCAGGAACAAGAAGCGAGAGGAAGAATTCAAACAAAGGAAAAAAAATCAAAGAAAAAATTGCAGTTGTGTCTGATGAGGAACTAGAGGCAAGAACAAGAAGCGAGAGGAAGAATTCAAACAAAGGAAAAAAAATCAAAGAAAAAATTGCAGTTGTGTTTGATGGGAAACTAGAGGAAGGAATGAGAAGCGAGAGGAAGAATCTGAACAAAGGAAAAAAATGGAAGAAAAATTTATAGTTATGTCTAATGAGGAACTAGAGGAAGGAGAGAGAATCGAGAGCGAGAAACTAGAGCGAGAGGAAGGCCCTTACGCGCGTTTTGAAGTCAAATGGATACTTTCACATGTGGTCGATGTCAGCAGAAGGCCATTTTTCATTCGTTTTTAACATTGGTTCATTATTCATTTGGGCCCCTGAAAAGAGGCCATTCGTACGATAATCCCATGGGCTCAATCCATGGTGGCCAGCTACCTAAGAATTAATATCTTACGAGTTTCCTTGACATCCAAATGTTGTAGGGTCAAGCAGGTTGTCCTGGGAAATTAGTCGAGATGCGCGTAAGTTGGCCTAGACACTTACAATCTTTAGAGAAAAGATCTCTCAAAATACTGCAATGTTATAATGTTGGATTAGAAAATAGATTTGAATTCAGTTAATCAAGAGACATGACAGGAGCCTCTAATATTGGCTTGGCTTTGCATCTTCTGTTCTTGCATTTTTAATCTCATTTGCTTGCATATAGTGTTTTCAAGGTATAGCTTGGGCTCGCCTATCACCTACATTGCATGTAGCAGATGCATGGCATGCACATTCAAAGGTGTTCATGCCATGATTGCCATTTTTATGGTGAGAAGGTGATGGCATTTGAACAAAGATATCAATGTGCATTATTGTATTCTAATTATTATAATATTTGTGCCACTGACAACTAACATTCTATTCCTTGTCTGGGCTTGTTTCTATTGTCTCAGTTGGAAGATACGGACACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAAGGACCAAGATGATAAGGTGAAAGGTTCATCTCCTAGCTTCGATATGATGCTTTATTTTTATTATTGTTTTCTTTTTTGGTACATCAAAACTTAAAAGTTTCTATTAAAATGAAATTGAGGAACAAAAAAGTAGGTAGTGAAATGATAACCAATTGAGCTTGCTTTATTTGTCCCAAAAAAAAAAAAAAAAAAGAAGCTTGCTTTAAATTTACCTATTTTATAACAATGATTAAAATATTGATGTCGCTATCAATATCGATGTTTCAATTCTACAAATATATCGATGACATACCAATATTGAAAGATATTCGTATAAATCAAATAATTTACAAAAAACATTTAAATTAATAATTAAGTACTTTTCATTCTCTAAATAAGTTATAGATATTGTTAGTATTTGTTTTTATTTTTGGGACAAAATACATCTTTTCATTGATATAGCGAAAGGATGCAACAAATGTTCAAAGGAAACAAACTATTAAAAGAAGTGAAATAAAGCGAAGCAAAGAAATTAGAAAAATAATATATGGAGCTCAAGCGAGGGAAAATGAAAACACCCTAAATCATACAAATATTACTAGGAGAATATTTTTTTAAAAAATTGGAAATGAGGCCTTTCATTGATATAATAAAAAGAGTCTTATACTCAAAATACAATAATTTAGAAACTGAAAATAAAGTATATTGCTAGGAGAAAAATGAAAAAAAAAGAATTTAAAAACCATTGTAAAGAATTTGAAGATGGCTAAATCAAAATGCTTCATTCAAATTCTAGATATTTTTTTAATTTTTTTTTTATTATTATTTTTTTAATATCCGTGAGTGTCCGAGCCGGCTTATGTGCACCTTAACTAATCTCACGGGACAACTTGCCTGAGTAAAAAAGGAATCCGTCTCAATAAATAGCTAAGAGGTCATGGGTTCAATTCATGGTGGCCACCTACCTAGGATTTAATATCCTATAAGTTTCCTTGACATTCAAATTCTAGAATTGTCTTCCATTAACCTTTGATTTCTCTCAAACCAAAATCTTGAATTTAATTGCATCATGGATAAAACTATTAAATTTAGATCCCATTGGACTTAATTTTTGTTTTTTCGCATTTTAATTTTCTTGTCTCATAATGTGTTCTAAAAGAGTTGTTTTGAACTCATCTGTTTATTTCTTTCTTTTTCATTCATTGAAGTAATGCATTTTATCTTATTGTTTCTGTTCAGCGCAAGGCAATACTGGAAGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCACATGTATGAACGTTATTGTGAAGAAAAATGGTGTTCTGTTCTATTCATGTTCCATCAATATGTTGTTTTGACCAGCATTCTGAGCTGAATAATAAACTGAGCGCTCTCTGATTTATAGGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGTAGAGTTGCTGGGGGTGGTGTCTTTAAAAATACAAATGGTTCCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTGGTAGAGGTAATTATTATTATTATTTTTATTTTGATATGAAGCAAAAACCACGCCATTGATTTATGTAATAGAGTACAAAAGGGTAGGGAGTCCTGTAGAGAAATAGTTACAAACCCCTCTCACTTTCTGTTTCTATCCATGTCCTGTTTCTGTATCTATAAATATTGAATGATAGTTTTCTAATGAAACTATGCTCATTCACAATTATTTTTAAAGACGATGGAAACTCGGCCAATTATACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGAGGAATTCTGGATGAAAGAAATGATCGTGGTCTTAAGTACTCTTCCTGAATCAGAGGTAGGCAATATGCATGCTTTTGTGAAACTTCACATCATATCACTTGATCTGACGGTTCCATAAATCTTTTCTATCAACTTAGTTAAACTCTGTTCCTAAGAAATTTTACAACAATATGGAATATCGTTCGTGTTATGTTTTTGTTGCTATTGCTATTCCTCTTATAATTTGAGAAGAGAAAATCCATATATTGACGAAAAGAAAATGGGTAGAAGAAACAGGAGGGAGGACAAACATATTTCCAACTCATAGGAGATTACAAAAACACCCTGCAATTGACATTGATAAAGAGAATAAATCAATACAAATATTCTAATTTTGTGAGCGCCAATTGGAGGCTACAATGCGCAAGTTCTACGAAGTCATTCTTTTAATCCATCAAAGGTATTCTTATTCCTTTTTTTGGCAAGATATTCCACACTGTCTATTAATCCAGCAATATCCTTGTTGGTTGTATGTGGCTGCTGAATATATGACCTAGATCATTTAGGAGTGTTATTCAGTCTGTAGTTTGTTGAAATTATGGTTACCTGATTTGTCGACATATTCACTAGGCATTTCTAGTGTACAACTACAATTGTAGACATGTTTAGGTTCTCTTAGGAAAAATTTAGTGTTTGTTAGTGAGCGCATTTGCCCCTAATCTTTTCACTCTTGTGTTTTCTTGACCTAACTAGTAGTTTCTGTCTCTTCTCACTGGTAGGAAACTGACTTGATTGTAATGATTGAATGGCCCAAAAGTCTTAGTTTAAAAACAAAATTCATGGCCATGGGCCTGGGAATATGTGCATTGCTATCATAAATATAATTGTACAAGATCTCAAAGTTCAATGAGAAATGCTGTATGAAATTCTATTCTGACAGGATATTAGACTATAGATGTTGCACATAACCCAGGCAACCAAACACATGGAAATGCATTGACTATTCATAGAGAAAGTGGTTAAACTGCAATAGATACATGGCAACCAGGAGCCAATTGGTTGTGCACTAACTAATGGGAAGTTGGTAGGGGATTTCTTTACAACTGAAAGAATTATCAGGAGGTAACCCTATGATTGATTAATCCCATAGATGCATATCAATATGTAGAGGATGAGGGATGACAAGATCACTCACTGTGCTGTTGCCAGTATAGTAGATGTTGGGAGCCACCCCTACGCAAATTAACTGTAATTGGGTGCTGAAAAATCCAGCTAGAGAATATGATTAACGTATTCCAAGAAGACAAAAGAGAAGAATTTGGATTCTTTCTCCCACTCAAAAGTATTCTGTCGAAGTGTTGATTTACAATGGGAAAGAGTTAAAATAAGAATTGTTGGAGATCTTTCATTTCCAAATATGCTACAAAACTCATTTTTGGAAGAGCTTGATCAGATCATTTATCCATTATTATAGATGGAGGTACAAAGTCAATCTTTTTGCAGTCTAATATTTTTCCTTTGGTTAGCCTGACAAAGGAAATGAATCATTCCATTAACTTTTAAGTCATGCAGATTTCTTCTAAATCCCAAACTACAACTATCACAAGTGACATCTCAAACAGCCTCAATGCAATTCAATTTGAGAGTTGAAAGACTAAGGGGGTGTTTGGGGAACCGTAATAAGATAAGCTTGTAATGTAATGTAATCCAAAATGAATGTTTGGATTGAGCGTTTTGTAATACAAAAATCATTCTGTTCCTACAGTTTTCAACCAAATCCTATTTCCCACCGTTTCCATGGTTTGTGATCTCATTTTCGTTTATTCCTTAAATACTCACATATTCCCAGTAATCCTATTATATTTTAACTCCCCAAACAGCCCATAAATGTTCTAGGAAAGGTTTCTTGTGAGAAGTTTTTCCAATGATCCCAACTTCTTCCTTAAATTTCATTCTTTAACAGTTACCAGGTCATACTTGAGATTGTTATATCATGATGGAGGATGTATCCTTTCATCCACATTTTCATAATTAAGACTTGTGTGCTATGGCACCTTTCTCCCCTATTCTAGAGTATATAGCTTCAGAGGAACAGGAGAACTTTTAGACGGTCTGAGAGGTTTGTGACAAGTTTAATAACTCTCTCAGAGTGTTGGTTTGTTTCTTTTTGTTTTGTTTTTTAAATGAGCTCTCTTTGAATGTTGTAACTAAGGACTTTGGTAATTATCCTCTATGTTTTAATCGTTTGGCTGGGAGTCTTTTTCTGTCTGATTAGGTCATTGTTATTTTGCTCCTTTTGGTGGTTGTTTCTTGTTGGTCCTTTTGTTTTCTTTCATTTCTTCTCCACGAGAGCTCCATTTCTCTAAAGCAATTCAGTAAGCAGAGAGGAGACATTCTTCTTTTTATGGTTATCAGTATCTTGGCCTCTATATTTGTTTGGCAAACAAAAAACTTTCAATAAATCTCTTAAAACCTTCACCAGCATATTAGCTGCACGGCTGGTGCAGATTTAGATATGCTTGACATGTAATTCGGTGAATATATCCCTGGTTTACAGGCAACAACAATTGATGTTCAGTATTTGTCTTACCCATTCCTAATGCTAGTCTAGTATAACACTTTGTTGTTGTCCTCACTCGTTGCCAATTAGTACATTCATATATCCTTTTGGTGCAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGACGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATACTGCAGGTGGACGGAGGGCTTCAAGGGGAATTGCAGGAAGGGTGGGTCTTCAATCCACTCCTTGGATGCTTGAACAGAATGTTCACATGTGTTGTGGGATTGTCTGACTTGTGTTATGCTTTCTTTGTCCATGGTTACTAGAAAGTGTATCAGGACGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACCGTATCTAAGGTAAGATTCTTGCTTGTTTGTAGCGATTTAATGGATTCTCATGGATTGTTTTATGTGGCCTGATGATCTAAAGTTTACGGGGTAGTTATGTTCTGGGCTGTTTGCCTGAAATATTTAATCAGATCTCAGCCAATTCAAGATCAAATCTGATCCATTCGATAAAAGAGGACTCATGAAACTTAAAACAGAAGTGATATAAACATGATATGAGCCAAATAAGGTCAAAACTTATCTTCCTCATAAGCTTCAATTTGGATGAAAAATAGAACAGTTGTACTCATTATTTTAAGCTTTACAACCACAACACTTGAATACTAAAATTAGTCTGACTCTGTACTTGGTGTATTTATTGTCAAAAACATTGACTAAGTAAATCCTCATTATTATTATTTTTACTTTTTGGAATTTAATGAAAGATTCAAACATTACTCTATTTGTCGAGAGTATATGCTTTACATCTGTTTATAAGACCCCATGGAACTTTGATCCCAAGTGTTTCCAATGAGAATTTGGTAATTAATTTACAATGCATGTTAATGGATCCAATTTATTTTACTTGACCACATTTCTAATTTTGTGCTATGAAATTGGAATATTCATCCACTGCCTGTTGCTCATTTGTTTTTCTTGCTCGTTAGTGTTAACTATGCTATGGTATGATTATCATCATATTGAGAGTTTCATCAATAATGAATCGAGCATCAAAATATGCTTTTGCATTTGTTAGGTCCTAGGTGGAATATATGCTGGAACCGAATCAGTGTCACTGCACAACATTTAGAATGGGTATGCGATCTCTCTCTTCTTGAACTCTAATTTTGTACCCATAGTTAAGGCACGGACTCCAAAATCAAAATTTTGTTTCACTTTTTTGCCATAATTAATAAGGAAACCATGTTCTAGCTTCGAAGTAGTTTTACTGAGCTTTTGATGGTTGTTTAACTGTTTTATCGGAAGTCCCCGAAGGGACTATGGTTGTTTAACTGTGGTTGCATTTAGAACATCTATTCAATTAGTAGATAGTACCAAATTCTTGACCATGTGATCATTATGTGGCTCTTGGAAGACAGCCAACAAATGATATTATAATGTGGATGATTTGTTCCACGAGCCTCATCTAAAACCCCTTTTGTTTCTCCTGTTTAATTTATTTCTTCCTTTGCTAATTGTTAAGAGTATGTCTTTTCACCCCATTTTTTTAATCCCAAGTACAGGTACATCAGAAGACACTTCACATTCTTGAGGAAATAGCATTCTAGTCTTTGTGTGCTATCATCAAGGTATGCTTCATTACCCTTCAGATGTCAATATGTGCATCCAGAAAAGATAAAGAGTTTTGTTAATACCCCAGGGACGAAACGAAAAGATCCCCCACCTTTAATGTATATAAAACTTTTAAAAGTTTTTCTCTAATTCACTCCTTAATTGGCTCAAGCCACCTAGGGTTGTTCTGGTAGTTAGTAAGGGCCAACATAAATAGCAAAGGGGCCAGCCTATAGGAAATAGGATCAAGCTATGGTAGCCAGCTATCTAGGATGTAATAGCTTTTGAGTTTTCTTGGTAATCAAATATAATAGGGTGAGATGTTTGTCCCAAGAATATAGTTGAGGTGTGCTGTGTGCACAAACTAGCTTGAACGCTCATGAATATCAAAAACAAAAACGTTGTAAGTTTTTAACTCTACCTTGACGATGATATAGTTACGATGATTAAAACCCTTTTGCACCCCCAAGTCTAGGAAGTCATATGACATGAGTTCTGAAACTGAATCTTATAGCTTTTGCCTAATCTCCATCTTTTCTGGTAGGCTTTCTTTTCACATTTTAAAGAAATTGTAGTTTGAAGTACAAGGTTTGGAGAAGATATTAGAGAGTCTTCCTCAAAGTTCTTAACGTGGAAGAGAGTTGGGGTCACTGCAACCCCTAATACAATCTCAACTGAATATCCGGCTCACGCTCTCATATTCTCTTCCCTCAACTGACATATAGATTGGCTTGTAAGTTAGTCGTATCCTACTCTTTCTCACAAAGTCCCCTTGTAAAAGACTTAAGTGAGAGTGCCGATATGAGTGGCAATAATTCCTATTAAAAGCACAATCACATCTTTGAGAACTTGGTCGAGCAAGTAGAAAAGGTAAACATGTCCCTGAATTAGAGATTAAACAACACTTCATTTAGGAAAATACTTTGATCCTTTGTTGCACACACGTCTCATTACAATAGCACAATATCATATTTAAAAGTATAACGAGAGATCAGAAGAACTTTGGATATTTTCCCGTGGGGCAAGTCGGACAGGGGGTCGAGAGAAACGAGCACGCTTCTTTGTTGTGTAAACTTTGTATGTTGAATCAATCTTCCATTGATGCTATAATGATAACAGGAATCAGGAGCAAATATAGCCCAAATCAAGCTTTTGAATCTCCCAAATCAGCCAACATGATGGAAATATCAAGCTGCCAGTGAAGTACCATGTGAAGAAAGGCCCCACTTGATAAGTCTAATGTAATAAATTTTGCTTTAATGTACACAAAAATGGGGCCTTTGTAATCATCTTCTATGCTGAGAGAAAGTAGAAGCAAACACAGCAAAGCAAGGATGGTTTCTGTTTTATGCAAAGAAGAAGCCCTTTTTCTTCTCAATCTCTATCTATTCTTCTTCTTTTGTGTTTGCCTTTAGTACAATGTATAAAACAAAGGCAAGGCCCCATTACCAAATGTTTCTATTTTTTAACATTTTTATTTTATTTTATTCATTTTTAATATAAGCTTGTTTGCTAACCTTTTCTTTTTGT

mRNA sequence

atacaacacaactcaaggaacacgaatcccctctatagaagtccaaaactatctagaacaacagacgaaaacattcacacaccttgattaacaatttgaagtagccttgaagattacactttctaaatatgataaataacaacatattgggatagaccttccgctgcacctgattgtctcaagactaactttatactactaaaattgttcgtattaaaatgataaattcagtcaagtttcgtgtccaatgagatgagaggaccaaaaaaccataaaattacatccaaactttaactaaccagtgatggaacaaagtatttcccaatcctgtgcactagtagcacttcaaatttcgaacttcatacttcatacttcacccaattaaaaacggacaaaccttaaaacctaaagatcccaagctaaaacccagccagattctcaattgagcaaccaattcaagaagatgaacagcagcctccggctgtttccaacttgttcgtgctcatacgggttacccacaaatccaaaaccaacttccctgtttttcattaacaatcctacccactttctgcatttgaagcgagccaagaggaagcagcaattagcatcctgcaccagttatgaagtcggtggaggttatccagaggaagagttggatatgcaagatagaagacgacccataaaagaagtgaagccgaaaatggacacttccgagtacgaagctctccttaaagggggcgaccaagtcacctctgttctcgaagagatgattgtcctcttggaagatacggacactgatgaaacatctgaagagatagctttgcagttggctgcacaaggtgtcataggtaaaagggttgatgagatggagtcaggatttatgatggccttagactacatgatccagattgctgaaaaggaccaagatgataagcgcaaggcaatactggaagtggtgaaggagacagttctatctcatctcacaaaaaaatgcccgccacatgttcaagtggtcggcctactttgtaggactccattgaaagaaagcagacatgaactacttcgtagagttgctgggggtggtgtctttaaaaatacaaatggttccaaagttcatatcccaggagcaaatcTTAACGACATTGCCAACCAAGCTGATGATTTGGTAGAGACGATGGAAACTCGGCCAATTATACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGAGGAATTCTGGATGAAAGAAATGATCGTGGTCTTAAGTACTCTTCCTGAATCAGAGGTGAACTTCTTGACCAAACTGGTTGCTTTGAAACCAGGGAATGTTGTCCAGGAGATGATACGAAATGTAATGTTAGGTAAAGACGAAGGGGCCGATAACTCAGGTGATGATGAGGAAGATACTGCAGGTGGACGGAGGGCTTCAAGGGGAATTGCAGGAAGGGTGGGTCTTCAATCCACTCCTTGGATGCTTGAACAGAATGTTCACATGTGTTGTGGGATTGTCTGACTTGTGTTATGCTTTCTTTGTCCATGGTTACTAGAAAGTGTATCAGGACGGAAGCCACTTCCAGTTCGTCCAGGCATGTTTCTAGAAACCGTATCTAAGGTCCTAGGTGGAATATATGCTGGAACCGAATCAGTGTCACTGCACAACATTTAGAATGGGTATGCGATCTCTCTCTTCTTGAACTCTAATTTTGTACCCATAGTTAAGGCACGGACTCCAAAATCAAAATTTTGTTTCACTTTTTTGCCATAATTAATAAGGAAACCATGTTCTAGCTTCGAAGTAGTTTTACTGAGCTTTTGATGGTTGTTTAACTGTTTTATCGGAAGTCCCCGAAGGGACTATGGTTGTTTAACTGTGGTTGCATTTAGAACATCTATTCAATTAGTAGATAGTACCAAATTCTTGACCATGTGATCATTATGTGGCTCTTGGAAGACAGCCAACAAATGATATTATAATGTGGATGATTTGTTCCACGAGCCTCATCTAAAACCCCTTTTGTTTCTCCTGTTTAATTTATTTCTTCCTTTGCTAATTGTTAAGAGTATGTCTTTTCACCCCATTTTTTTAATCCCAAGTACAGGTACATCAGAAGACACTTCACATTCTTGAGGAAATAGCATTCTAGTCTTTGTGTGCTATCATCAAGGTATGCTTCATTACCCTTCAGATGTCAATATGTGCATCCAGAAAAGATAAAGAGTTTTGTTAATACCCCAGGGACGAAACGAAAAGATCCCCCACCTTTAATGTATATAAAACTTTTAAAAGTTTTTCTCTAATTCACTCCTTAATTGGCTCAAGCCACCTAGGGTTGTTCTGGTAGTTAGTAAGGGCCAACATAAATAGCAAAGGGGCCAGCCTATAGGAAATAGGATCAAGCTATGGTAGCCAGCTATCTAGGATGTAATAGCTTTTGAGTTTTCTTGGTAATCAAATATAATAGGGTGAGATGTTTGTCCCAAGAATATAGTTGAGGTGTGCTGTGTGCACAAACTAGCTTGAACGCTCATGAATATCAAAAACAAAAACGTTGTAAGTTTTTAACTCTACCTTGACGATGATATAGTTACGATGATTAAAACCCTTTTGCACCCCCAAGTCTAGGAAGTCATATGACATGAGTTCTGAAACTGAATCTTATAGCTTTTGCCTAATCTCCATCTTTTCTGGTAGGCTTTCTTTTCACATTTTAAAGAAATTGTAGTTTGAAGTACAAGGTTTGGAGAAGATATTAGAGAGTCTTCCTCAAAGTTCTTAACGTGGAAGAGAGTTGGGGTCACTGCAACCCCTAATACAATCTCAACTGAATATCCGGCTCACGCTCTCATATTCTCTTCCCTCAACTGACATATAGATTGGCTTGTAAGTTAGTCGTATCCTACTCTTTCTCACAAAGTCCCCTTGTAAAAGACTTAAGTGAGAGTGCCGATATGAGTGGCAATAATTCCTATTAAAAGCACAATCACATCTTTGAGAACTTGGTCGAGCAAGTAGAAAAGGTAAACATGTCCCTGAATTAGAGATTAAACAACACTTCATTTAGGAAAATACTTTGATCCTTTGTTGCACACACGTCTCATTACAATAGCACAATATCATATTTAAAAGTATAACGAGAGATCAGAAGAACTTTGGATATTTTCCCGTGGGGCAAGTCGGACAGGGGGTCGAGAGAAACGAGCACGCTTCTTTGTTGTGTAAACTTTGTATGTTGAATCAATCTTCCATTGATGCTATAATGATAACAGGAATCAGGAGCAAATATAGCCCAAATCAAGCTTTTGAATCTCCCAAATCAGCCAACATGATGGAAATATCAAGCTGCCAGTGAAGTACCATGTGAAGAAAGGCCCCACTTGATAAGTCTAATGTAATAAATTTTGCTTTAATGTACACAAAAATGGGGCCTTTGTAATCATCTTCTATGCTGAGAGAAAGTAGAAGCAAACACAGCAAAGCAAGGATGGTTTCTGTTTTATGCAAAGAAGAAGCCCTTTTTCTTCTCAATCTCTATCTATTCTTCTTCTTTTGTGTTTGCCTTTAGTACAATGTATAAAACAAAGGCAAGGCCCCATTACCAAATGTTTCTATTTTTTAACATTTTTATTTTATTTTATTCATTTTTAATATAAGCTTGTTTGCTAACCTTTTCTTTTTGT

Coding sequence (CDS)

ATGAACAGCAGCCTCCGGCTGTTTCCAACTTGTTCGTGCTCATACGGGTTACCCACAAATCCAAAACCAACTTCCCTGTTTTTCATTAACAATCCTACCCACTTTCTGCATTTGAAGCGAGCCAAGAGGAAGCAGCAATTAGCATCCTGCACCAGTTATGAAGTCGGTGGAGGTTATCCAGAGGAAGAGTTGGATATGCAAGATAGAAGACGACCCATAAAAGAAGTGAAGCCGAAAATGGACACTTCCGAGTACGAAGCTCTCCTTAAAGGGGGCGACCAAGTCACCTCTGTTCTCGAAGAGATGATTGTCCTCTTGGAAGATACGGACACTGATGAAACATCTGAAGAGATAGCTTTGCAGTTGGCTGCACAAGGTGTCATAGGTAAAAGGGTTGATGAGATGGAGTCAGGATTTATGATGGCCTTAGACTACATGATCCAGATTGCTGAAAAGGACCAAGATGATAAGCGCAAGGCAATACTGGAAGTGGTGAAGGAGACAGTTCTATCTCATCTCACAAAAAAATGCCCGCCACATGTTCAAGTGGTCGGCCTACTTTGTAGGACTCCATTGAAAGAAAGCAGACATGAACTACTTCGTAGAGTTGCTGGGGGTGGTGTCTTTAAAAATACAAATGGTTCCAAAGTTCATATCCCAGGAGCAAATCTTAACGACATTGCCAACCAAGCTGATGATTTGGTAGAGACGATGGAAACTCGGCCAATTATACCTGATCGAAAACTGCTTGCAAGGCTTGTTCTGATTAGAGAAGAGGCTCGGAATATGATGGGAGGAGGAATTCTGGATGAAAGAAATGATCGTGGTCTTAAGTACTCTTCCTGA

Protein sequence

MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYPEEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAGGGVFKNTNGSKVHIPGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGLKYSS

Homology

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BLAST of Clc09G08530 vs. NCBI nr
Match: XP_038898241.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 523.9 bits (1348), Expect = 8.8e-145
Identity = 267/278 (96.04%), Postives = 273/278 (98.20%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFPTCSCS  LPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EEELDMQDRRRPIKEVKPKMD+SEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. NCBI nr
Match: XP_008447229.1 (PREDICTED: uncharacterized protein LOC103489722 [Cucumis melo] >KAA0042003.1 uncharacterized protein E6C27_scaffold67G004450 [Cucumis melo var. makuwa] >TYK17939.1 uncharacterized protein E5676_scaffold306G002360 [Cucumis melo var. makuwa])

HSP 1 Score: 514.6 bits (1324), Expect = 5.3e-142
Identity = 261/278 (93.88%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY LPTNPKPT+L+FINNPTHFLHLKR KRKQ LASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EEE DMQD RRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. NCBI nr
Match: XP_004150361.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Cucumis sativus] >KGN44684.1 hypothetical protein Csa_016754 [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 2.6e-141
Identity = 259/278 (93.17%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY LPTNPKPT+L+FINNPTHFLHLKR  RKQ LASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPNRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           +EE DMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  DEEFDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLK+SRHELLRRV AGGGVFK+ NG+KVHIP ANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKDSRHELLRRVAAGGGVFKSKNGTKVHIPSANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. NCBI nr
Match: XP_038898240.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 511.9 bits (1317), Expect = 3.5e-141
Identity = 267/298 (89.60%), Postives = 273/298 (91.61%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFPTCSCS  LPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVL--------------- 120
           EEELDMQDRRRPIKEVKPKMD+SEYEALLKGGDQVTSVLEEMIVL               
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLTHDVHIQRCSCHDCQ 120

Query: 121 -----LEDTDTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA 180
                LEDT+ DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA
Sbjct: 121 FHGEKLEDTNIDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA 180

Query: 181 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHI 240
           ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVHI
Sbjct: 181 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHI 240

Query: 241 PGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           PGANLNDIANQADDL+ETMETRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 PGANLNDIANQADDLIETMETRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 298

[Close]

BLAST of Clc09G08530 vs. NCBI nr
Match: XP_038898239.1 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 511.5 bits (1316), Expect = 4.5e-141
Identity = 267/299 (89.30%), Postives = 273/299 (91.30%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFPTCSCS  LPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCSCSNRLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVL--------------- 120
           EEELDMQDRRRPIKEVKPKMD+SEYEALLKGGDQVTSVLEEMIVL               
Sbjct: 61  EEELDMQDRRRPIKEVKPKMDSSEYEALLKGGDQVTSVLEEMIVLQTHDVHIQRCSCHDC 120

Query: 121 ------LEDTDTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRK 180
                 LEDT+ DETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRK
Sbjct: 121 QFHGEKLEDTNIDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRK 180

Query: 181 AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVH 240
           AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVH
Sbjct: 181 AILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVH 240

Query: 241 IPGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           IPGANLNDIANQADDL+ETMETRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 IPGANLNDIANQADDLIETMETRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 299

[Close]

BLAST of Clc09G08530 vs. ExPASy Swiss-Prot
Match: Q1H5E9 (Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRDA1 PE=1 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 4.2e-97
Identity = 184/237 (77.64%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 42  KRKQQLASCTSYEVGGGYPEEEL-DMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLE 101
           K K+ +  C  YEVGGGY +EEL +    ++    VK K+D +EYEALLKGG+QVTSVLE
Sbjct: 44  KLKRLVQFCAPYEVGGGYTDEELFERYGTQQNQTNVKDKLDPAEYEALLKGGEQVTSVLE 103

Query: 102 EMIVLLEDTDTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA 161
           EMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFMMALDYMIQ+A+KDQD+KRK+
Sbjct: 104 EMITLLEDMKMNEASENVAVELAAQGVIGKRVDEMESGFMMALDYMIQLADKDQDEKRKS 163

Query: 162 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHI 221
           +LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRV AGGG F++ NG+K+HI
Sbjct: 164 LLEVVKETVLSHLTKKCPPHVQVIGLLCRTPKKESRHELLRRVAAGGGAFESENGTKLHI 223

Query: 222 PGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRG 277
           PGANLNDIANQADDL+ETMETRP IPDRKLLARLVLIREEARNMMGGGILDERNDRG
Sbjct: 224 PGANLNDIANQADDLLETMETRPAIPDRKLLARLVLIREEARNMMGGGILDERNDRG 280

[Close]

BLAST of Clc09G08530 vs. ExPASy Swiss-Prot
Match: Q53K52 (Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0425300 PE=2 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.0e-79
Identity = 150/199 (75.38%), Postives = 177/199 (88.94%), Query Frame = 0


Query: 79  KMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIALQLAAQGVIGKRVDEMESG 138
           K D +E +ALL+GG+QV SVL+EM+ L+ED + D + E +A++L AQGVIGKRVDEMESG
Sbjct: 66  KWDPAECDALLRGGEQVASVLQEMLKLMEDMEMDGSFESLAVELIAQGVIGKRVDEMESG 125

Query: 139 FMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHE 198
           F+MALDYMIQ+AEKD D++RK++LEVVK+TVL HLTKKCPPHVQVVGLLC+T  K+SRHE
Sbjct: 126 FLMALDYMIQLAEKDSDNERKSLLEVVKQTVLDHLTKKCPPHVQVVGLLCQTEKKDSRHE 185

Query: 199 LLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIR 258
           LLRRV AGGGVFKN  G K  IPGANLNDIANQADDL+E+ME+RP IPDRKLLARLV++R
Sbjct: 186 LLRRVAAGGGVFKNDKGLKCQIPGANLNDIANQADDLLESMESRPTIPDRKLLARLVIVR 245

Query: 259 EEARNMMGGGILDERNDRG 277
           EEARNMMGGG+LDERNDRG
Sbjct: 246 EEARNMMGGGLLDERNDRG 264

[Close]

BLAST of Clc09G08530 vs. ExPASy TrEMBL
Match: A0A5D3D3S5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002360 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.6e-142
Identity = 261/278 (93.88%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY LPTNPKPT+L+FINNPTHFLHLKR KRKQ LASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EEE DMQD RRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. ExPASy TrEMBL
Match: A0A1S3BHT4 (uncharacterized protein LOC103489722 OS=Cucumis melo OX=3656 GN=LOC103489722 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.6e-142
Identity = 261/278 (93.88%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY LPTNPKPT+L+FINNPTHFLHLKR KRKQ LASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPKRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EEE DMQD RRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  EEEFDMQDTRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQ AEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQTAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGGVFK+ NG+KVHIPGANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGVFKSKNGTKVHIPGANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. ExPASy TrEMBL
Match: A0A0A0K6Y5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372300 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.3e-141
Identity = 259/278 (93.17%), Postives = 269/278 (96.76%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFP+CSCSY LPTNPKPT+L+FINNPTHFLHLKR  RKQ LASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPSCSCSYQLPTNPKPTTLYFINNPTHFLHLKRPNRKQLLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           +EE DMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDT+ DETSEEIAL
Sbjct: 61  DEEFDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTNIDETSEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLK+SRHELLRRV AGGGVFK+ NG+KVHIP ANLNDIANQADDL+ETME
Sbjct: 181 VQVVGLLCRTPLKDSRHELLRRVAAGGGVFKSKNGTKVHIPSANLNDIANQADDLIETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRPI+PDRKLLARLVLIREEARNMMGGGILDERNDRGL
Sbjct: 241 TRPIVPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278

[Close]

BLAST of Clc09G08530 vs. ExPASy TrEMBL
Match: A0A6J1KT24 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497973 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.0e-135
Identity = 251/278 (90.29%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFPTC CS  LPT PKPTSL FI+NP+HF HLK AKRKQQLASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCPCSARLPTIPKPTSLVFIDNPSHFPHLKPAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EE+LDMQDRRR  KE  PKMDTSEYEALLKGGDQVTSVLEEMI++LEDT+TDE SEEIAL
Sbjct: 61  EEQLDMQDRRRSRKEGNPKMDTSEYEALLKGGDQVTSVLEEMILILEDTNTDEASEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE+DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAERDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGG FK+ NG+KVHIPGANLNDIANQADDLVETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGAFKSKNGTKVHIPGANLNDIANQADDLVETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRP++PDRKLLARLVLIREEARNMMGGGILDERN+RGL
Sbjct: 241 TRPVVPDRKLLARLVLIREEARNMMGGGILDERNNRGL 278

[Close]

BLAST of Clc09G08530 vs. ExPASy TrEMBL
Match: A0A6J1KVI8 (protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497973 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 4.0e-135
Identity = 251/278 (90.29%), Postives = 263/278 (94.60%), Query Frame = 0


Query: 1   MNSSLRLFPTCSCSYGLPTNPKPTSLFFINNPTHFLHLKRAKRKQQLASCTSYEVGGGYP 60
           MNSSLRLFPTC CS  LPT PKPTSL FI+NP+HF HLK AKRKQQLASCTSYEVGGGYP
Sbjct: 1   MNSSLRLFPTCPCSARLPTIPKPTSLVFIDNPSHFPHLKPAKRKQQLASCTSYEVGGGYP 60

Query: 61  EEELDMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLEEMIVLLEDTDTDETSEEIAL 120
           EE+LDMQDRRR  KE  PKMDTSEYEALLKGGDQVTSVLEEMI++LEDT+TDE SEEIAL
Sbjct: 61  EEQLDMQDRRRSRKEGNPKMDTSEYEALLKGGDQVTSVLEEMILILEDTNTDEASEEIAL 120

Query: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKAILEVVKETVLSHLTKKCPPH 180
           QLAAQGVIGKRVDEMESGFMMALDYMIQIAE+DQDDKRKAILEVVKETVLSHLTKKCPPH
Sbjct: 121 QLAAQGVIGKRVDEMESGFMMALDYMIQIAERDQDDKRKAILEVVKETVLSHLTKKCPPH 180

Query: 181 VQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHIPGANLNDIANQADDLVETME 240
           VQVVGLLCRTPLKESRHELLRRV AGGG FK+ NG+KVHIPGANLNDIANQADDLVETME
Sbjct: 181 VQVVGLLCRTPLKESRHELLRRVAAGGGAFKSKNGTKVHIPGANLNDIANQADDLVETME 240

Query: 241 TRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRGL 278
           TRP++PDRKLLARLVLIREEARNMMGGGILDERN+RGL
Sbjct: 241 TRPVVPDRKLLARLVLIREEARNMMGGGILDERNNRGL 278

[Close]

BLAST of Clc09G08530 vs. TAIR 10
Match: AT5G48470.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 355.9 bits (912), Expect = 3.0e-98
Identity = 184/237 (77.64%), Postives = 208/237 (87.76%), Query Frame = 0


Query: 42  KRKQQLASCTSYEVGGGYPEEEL-DMQDRRRPIKEVKPKMDTSEYEALLKGGDQVTSVLE 101
           K K+ +  C  YEVGGGY +EEL +    ++    VK K+D +EYEALLKGG+QVTSVLE
Sbjct: 44  KLKRLVQFCAPYEVGGGYTDEELFERYGTQQNQTNVKDKLDPAEYEALLKGGEQVTSVLE 103

Query: 102 EMIVLLEDTDTDETSEEIALQLAAQGVIGKRVDEMESGFMMALDYMIQIAEKDQDDKRKA 161
           EMI LLED   +E SE +A++LAAQGVIGKRVDEMESGFMMALDYMIQ+A+KDQD+KRK+
Sbjct: 104 EMITLLEDMKMNEASENVAVELAAQGVIGKRVDEMESGFMMALDYMIQLADKDQDEKRKS 163

Query: 162 ILEVVKETVLSHLTKKCPPHVQVVGLLCRTPLKESRHELLRRV-AGGGVFKNTNGSKVHI 221
           +LEVVKETVLSHLTKKCPPHVQV+GLLCRTP KESRHELLRRV AGGG F++ NG+K+HI
Sbjct: 164 LLEVVKETVLSHLTKKCPPHVQVIGLLCRTPKKESRHELLRRVAAGGGAFESENGTKLHI 223

Query: 222 PGANLNDIANQADDLVETMETRPIIPDRKLLARLVLIREEARNMMGGGILDERNDRG 277
           PGANLNDIANQADDL+ETMETRP IPDRKLLARLVLIREEARNMMGGGILDERNDRG
Sbjct: 224 PGANLNDIANQADDLLETMETRPAIPDRKLLARLVLIREEARNMMGGGILDERNDRG 280

The following BLAST results are available for this feature:

BLAST of Clc09G08530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898241.1	8.8e-145	96.04	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X3 [Benincasa ...	[more]
XP_008447229.1	5.3e-142	93.88	PREDICTED: uncharacterized protein LOC103489722 [Cucumis melo] >KAA0042003.1 unc...	[more]
XP_004150361.1	2.6e-141	93.17	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic [Cucumis sativus] >KGN...	[more]
XP_038898240.1	3.5e-141	89.60	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 [Benincasa ...	[more]
XP_038898239.1	4.5e-141	89.30	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 [Benincasa ...	[more]

BLAST of Clc09G08530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1H5E9	4.2e-97	77.64	Protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic OS=Arabidopsis thalian...	[more]
Q53K52	1.0e-79	75.38	Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic OS=Oryza sativ...	[more]

BLAST of Clc09G08530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3S5	2.6e-142	93.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BHT4	2.6e-142	93.88	uncharacterized protein LOC103489722 OS=Cucumis melo OX=3656 GN=LOC103489722 PE=...	[more]
A0A0A0K6Y5	1.3e-141	93.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372300 PE=4 SV=1	[more]
A0A6J1KT24	4.0e-135	90.29	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X2 OS=Cucurbit...	[more]
A0A6J1KVI8	4.0e-135	90.29	protein PEP-RELATED DEVELOPMENT ARRESTED 1, chloroplastic isoform X1 OS=Cucurbit...	[more]

BLAST of Clc09G08530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48470.1	3.0e-98	77.64	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038961	Protein PEP-related development arrested 1	PANTHER	PTHR37262	PROTEIN PEP-RELATED DEVELOPMENT ARRESTED 1, CHLOROPLASTIC	coord: 34..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G08530.1	Clc09G08530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0042644	chloroplast nucleoid