Homology
BLAST of Clc09G08240 vs. NCBI nr
Match:
XP_038899639.1 (poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida])
HSP 1 Score: 1118.6 bits (2892), Expect = 0.0e+00
Identity = 556/618 (89.97%), Postives = 578/618 (93.53%), Query Frame = 0
Query: 1 MASRFSSLQLQRRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSF 60
MASRFSS+QLQRRLYTTT+QWSVRQVR+SDF CLGELKNHISDSDFIALSLQNTGSSSF
Sbjct: 1 MASRFSSVQLQRRLYTTTSQWSVRQVRSSDFHGCLGELKNHISDSDFIALSLQNTGSSSF 60
Query: 61 PWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNIG 120
PWHRL PFDT+DTAYCK KY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRDELNIG
Sbjct: 61 PWHRLQPFDTYDTAYCKTKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDELNIG 120
Query: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKS 180
MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQE IAKVR+GCPT T +TNV KS
Sbjct: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQEFIAKVRMGCPTLTSNTNVAKS 180
Query: 181 SSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTIDV 240
SSKPSVAD+IFVQRVKSRVKNWKDACNSS+K +D LL +LEKL+ G E YG RPSMTIDV
Sbjct: 181 SSKPSVADSIFVQRVKSRVKNWKDACNSSSKKSDGLLSLLEKLIPGREQYGSRPSMTIDV 240
Query: 241 CSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEEE 300
CSERQV+LVLELLMEFSDDLVPV+IPAK GGTRAIRAILTSSKEDKILLEKELQ LEEEE
Sbjct: 241 CSERQVILVLELLMEFSDDLVPVVIPAKSGGTRAIRAILTSSKEDKILLEKELQNLEEEE 300
Query: 301 NKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVL 360
NKK GFREVI+MISASQKPI+SYS LNDFTFIHSKFLAPLPT+IDEFASSLHLVFPRVL
Sbjct: 301 NKKIRGFREVIEMISASQKPIISYSSLNDFTFIHSKFLAPLPTNIDEFASSLHLVFPRVL 360
Query: 361 DVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHLF 420
DVKHLMSKIGGL+KP SI SALSYLKNHYYAP+DLDIP+EATGNDHKFHGHNAI LCHLF
Sbjct: 361 DVKHLMSKIGGLNKPTSITSALSYLKNHYYAPVDLDIPVEATGNDHKFHGHNAIWLCHLF 420
Query: 421 AKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVSC 480
AKVCSVLKIDL G QSNNN LASMLD CANVS SFSPYH + EDE+IKIW KN KVSC
Sbjct: 421 AKVCSVLKIDLDGVQSNNNKRLASMLDECANVSSSFSPYHHKPEDENIKIWAKNAIKVSC 480
Query: 481 RHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDAI 540
RHL+FLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDAI
Sbjct: 481 RHLIFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDAI 540
Query: 541 NSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAML-EHHSISEAGPET 600
NSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAML EHHSI EA PET
Sbjct: 541 NSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEEHHSILEAEPET 600
Query: 601 VRLDIKYSNDSLIYLNDL 618
VRLDI YSNDSLIYLNDL
Sbjct: 601 VRLDINYSNDSLIYLNDL 618
BLAST of Clc09G08240 vs. NCBI nr
Match:
XP_038899638.1 (poly(A)-specific ribonuclease PARN-like isoform X1 [Benincasa hispida])
HSP 1 Score: 1102.0 bits (2849), Expect = 0.0e+00
Identity = 556/650 (85.54%), Postives = 578/650 (88.92%), Query Frame = 0
Query: 1 MASRFSSLQLQRRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSF 60
MASRFSS+QLQRRLYTTT+QWSVRQVR+SDF CLGELKNHISDSDFIALSLQNTGSSSF
Sbjct: 1 MASRFSSVQLQRRLYTTTSQWSVRQVRSSDFHGCLGELKNHISDSDFIALSLQNTGSSSF 60
Query: 61 PWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNIG 120
PWHRL PFDT+DTAYCK KY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRDELNIG
Sbjct: 61 PWHRLQPFDTYDTAYCKTKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDELNIG 120
Query: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKS 180
MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQE IAKVR+GCPT T +TNV KS
Sbjct: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQEFIAKVRMGCPTLTSNTNVAKS 180
Query: 181 SSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTIDV 240
SSKPSVAD+IFVQRVKSRVKNWKDACNSS+K +D LL +LEKL+ G E YG RPSMTIDV
Sbjct: 181 SSKPSVADSIFVQRVKSRVKNWKDACNSSSKKSDGLLSLLEKLIPGREQYGSRPSMTIDV 240
Query: 241 CSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEEE 300
CSERQV+LVLELLMEFSDDLVPV+IPAK GGTRAIRAILTSSKEDKILLEKELQ LEEEE
Sbjct: 241 CSERQVILVLELLMEFSDDLVPVVIPAKSGGTRAIRAILTSSKEDKILLEKELQNLEEEE 300
Query: 301 NKKFCGFREVIDMISASQKPIVSYSPLN-------------------------------- 360
NKK GFREVI+MISASQKPI+SYS LN
Sbjct: 301 NKKIRGFREVIEMISASQKPIISYSSLNGVYLIFFIFGCFLFFVFLLFSNFCSNAFVLDA 360
Query: 361 DFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKHLMSKIGGLSKPNSIASALSYLKNH 420
DFTFIHSKFLAPLPT+IDEFASSLHLVFPRVLDVKHLMSKIGGL+KP SI SALSYLKNH
Sbjct: 361 DFTFIHSKFLAPLPTNIDEFASSLHLVFPRVLDVKHLMSKIGGLNKPTSITSALSYLKNH 420
Query: 421 YYAPIDLDIPIEATGNDHKFHGHNAIRLCHLFAKVCSVLKIDLSGFQSNNNNCLASMLDG 480
YYAP+DLDIP+EATGNDHKFHGHNAI LCHLFAKVCSVLKIDL G QSNNN LASMLD
Sbjct: 421 YYAPVDLDIPVEATGNDHKFHGHNAIWLCHLFAKVCSVLKIDLDGVQSNNNKRLASMLDE 480
Query: 481 CANVSCSFSPYHCEHEDEDIKIWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEV 540
CANVS SFSPYH + EDE+IKIW KN KVSCRHL+FLWGFRDGMTARLLKTALEGSHEV
Sbjct: 481 CANVSSSFSPYHHKPEDENIKIWAKNAIKVSCRHLIFLWGFRDGMTARLLKTALEGSHEV 540
Query: 541 FCEEFDVRFVDKKCAIVVFWQPGLSETFLDAINSDGIVGSLREMVSEGLRAAGYETYKRV 600
FCEEFDVRFVDKKCAIVVFWQPGLSETFLDAINSDGIVGSLREMVSEGLRAAGYETYKRV
Sbjct: 541 FCEEFDVRFVDKKCAIVVFWQPGLSETFLDAINSDGIVGSLREMVSEGLRAAGYETYKRV 600
Query: 601 CRLDLWEADLAESLERAML-EHHSISEAGPETVRLDIKYSNDSLIYLNDL 618
CRLDLWEADLAESLERAML EHHSI EA PETVRLDI YSNDSLIYLNDL
Sbjct: 601 CRLDLWEADLAESLERAMLEEHHSILEAEPETVRLDINYSNDSLIYLNDL 650
BLAST of Clc09G08240 vs. NCBI nr
Match:
XP_023547854.1 (poly(A)-specific ribonuclease PARN-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1058.1 bits (2735), Expect = 2.8e-305
Identity = 534/619 (86.27%), Postives = 564/619 (91.11%), Query Frame = 0
Query: 1 MASRFSSLQLQ-RRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFSSLQLQ RRL+T TNQ SVRQ+RNSDF CLG+LKNHISDSDFIALSLQNTGSSS
Sbjct: 1 MASRFSSLQLQRRRLHTATNQLSVRQIRNSDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHRL FDT+DTAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRD+LNI
Sbjct: 61 FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIG P TPST VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRPILTPSTYAVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SSS+ ++AD++FVQRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
VCSERQVLLVLELL EFSDDLVPV+IPAKGGGT+AIRAILTSSKEDKILLEKELQ LE+E
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVIPAKGGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREV+DMISASQKPI+SY+ LNDF FIHSKFLAPLPT IDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDMISASQKPILSYNSLNDFAFIHSKFLAPLPTGIDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
LDVKHL+SKIGGLSKP SIASALSYLKNHY+APIDLDIP+EATGND KFHGHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPLEATGNDRKFHGHNAILLCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAK CSVLKIDL G QS NNNCLAS LDGCANV SFSP H E +D+DIKI KNVRKVS
Sbjct: 421 FAKACSVLKIDLGGAQS-NNNCLASKLDGCANVFGSFSPDHHESKDDDIKISMKNVRKVS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFRDGMTAR +KTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTARSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE-HHSISEAGPE 600
INSDGIVG L++MVSEGL+A GYETYKRVCRL LWEADLAESLERA E HHS EA PE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLD+ YSNDS+I L DL
Sbjct: 601 TERLDMYYSNDSIINLADL 618
BLAST of Clc09G08240 vs. NCBI nr
Match:
XP_022953758.1 (poly(A)-specific ribonuclease PARN-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 1053.1 bits (2722), Expect = 9.1e-304
Identity = 532/619 (85.95%), Postives = 563/619 (90.95%), Query Frame = 0
Query: 1 MASRFSSLQLQ-RRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFSSL+LQ RRL+T TNQ SVRQ+RN+DF CLG+LKNHISDSDFIALSLQNTGSSS
Sbjct: 1 MASRFSSLRLQRRRLHTATNQLSVRQIRNTDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHRL FDT+DTAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRD+LNI
Sbjct: 61 FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIG TPST VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRSFLTPSTYAVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SSS+ ++AD++FVQRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
VCSERQVLLVLELL EFSDDLVPV+ PAKGGGT+AIRAILTSSKEDKILLEKELQ LEEE
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVNPAKGGGTQAIRAILTSSKEDKILLEKELQNLEEE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREV+D+ISASQKPI+SY+ LNDF FIHSKFLAPLPT +DEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPILSYNSLNDFAFIHSKFLAPLPTGMDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
LDVKHL+SKIGGLSKP SIASALSYLKNHY+APIDLDIP+EATGND KFHGHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILLCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAK CSVLKIDL G QS NNNCLAS LDGCANV SFSP H E EDEDIKI TKNVRKVS
Sbjct: 421 FAKACSVLKIDLGGVQS-NNNCLASKLDGCANVFGSFSPDHHESEDEDIKISTKNVRKVS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFRDGMTA+ +KTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTAQSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE-HHSISEAGPE 600
INSDGIVG L++MVSEGL+A GYETYKRVCRL LWEADLAESLERA E HHS EA PE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLDI YSNDS+I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 618
BLAST of Clc09G08240 vs. NCBI nr
Match:
KAG6576047.1 (Poly(A)-specific ribonuclease PARN-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1053.1 bits (2722), Expect = 9.1e-304
Identity = 531/619 (85.78%), Postives = 563/619 (90.95%), Query Frame = 0
Query: 1 MASRFSSLQL-QRRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFSSL+L +RRL+T TNQ SVRQ+RN+DF CLG+LKNHISDSDFIALSLQNTGSSS
Sbjct: 1 MASRFSSLRLRRRRLHTATNQLSVRQIRNTDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHRL FDT+DTAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRD+LNI
Sbjct: 61 FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIG TPST VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRSFLTPSTYAVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SS + ++AD++FVQRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTID
Sbjct: 181 SSFRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
VCSERQVLLVLELL EFSDDLVPV+IPAKGGGT+AIRAILTSSKEDKILLEKELQ LEEE
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVIPAKGGGTQAIRAILTSSKEDKILLEKELQNLEEE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREV+D+ISASQKPI+SY+ LNDF FIHSKFLAPLPT +DEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPILSYNSLNDFAFIHSKFLAPLPTGMDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
LDVKHL+SKIGGLSKP SIASALSYLKNHY+APIDLDIP+EATGND KFHGHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILLCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAK CSVLKIDL G QS NNNCLAS LDGCANV SFSP H E EDEDIKI TKN+RKVS
Sbjct: 421 FAKACSVLKIDLGGVQS-NNNCLASKLDGCANVFGSFSPDHHESEDEDIKISTKNIRKVS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFRDGMTAR +KTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTARSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE-HHSISEAGPE 600
INSDGIVG L++MVSEGL+A GYETYKRVCRL LWEADLAESLERA E HHS EA PE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLDI YSNDS+I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 618
BLAST of Clc09G08240 vs. ExPASy Swiss-Prot
Match:
Q8W4C3 (Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g25430 PE=2 SV=1)
HSP 1 Score: 621.3 bits (1601), Expect = 1.2e-176
Identity = 332/629 (52.78%), Postives = 443/629 (70.43%), Query Frame = 0
Query: 1 MASRF-SSLQLQRRLYTTTNQ--WSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGS 60
M RF SS+ T NQ WSV+QV+ S+F L E++ I SDFIALSLQNTGS
Sbjct: 1 MQRRFLSSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGS 60
Query: 61 SSFPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDEL 120
+ WHR+ DT T+Y KAKY AE++QILQFALCPFS++ S L HPYNFHLFPRDEL
Sbjct: 61 YAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDEL 120
Query: 121 NIGMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNV 180
GMPSYSFSCQ S LT+MAREGFDF+ CIY+GISYLSRAQES +K P S V
Sbjct: 121 KCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTV 180
Query: 181 VKSSSKPSVADTIFVQRVKSRVKNWKDAC-NSSTKT-NDALLIVLEKLVVGSEPYGLRPS 240
SSS +VADT+FV R++SRVKNW+ +C +S +KT +D L+ L +LV+GSE YG R
Sbjct: 181 --SSSPATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLC 240
Query: 241 MTIDVCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQK 300
+TIDVCSERQV L+LE+L EFSDD+VP+L+ +K GT+A+R + SSKEDK L ++EL+
Sbjct: 241 LTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKD 300
Query: 301 LEEEENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLV 360
LE+EEN++ GFREV+D IS+SQKP+VS + L+DFT IH+KFL PLP+++D+F+SSL
Sbjct: 301 LEKEENRRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSA 360
Query: 361 FPRVLDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDI-----PIEATGNDHKFHG 420
FP V+D+ M +I LS +++ +A+S L N ++AP+D+++ P++ H+ HG
Sbjct: 361 FPNVVDLSQFMKEISPLSNISNLPAAMSSL-NRFFAPVDVEVANQGCPVK-LDEGHQSHG 420
Query: 421 HNAIRLCHLFAKVCSVLKIDLSGFQSNNN-NCLASMLDGCANVSCSFSPYHCEHEDEDIK 480
NA+ + LFAK+C++ K DLS QSN + LAS + SCS + DE++K
Sbjct: 421 QNAVMISQLFAKLCTIQKSDLSTIQSNEDFQALASDEHANSVTSCSKNA-----GDENVK 480
Query: 481 IWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQ 540
+W+KN R+VS +LVF+WG MTA LK L+ SH VF EFDV+++D+ AI+VFW+
Sbjct: 481 VWSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWE 540
Query: 541 PGLSETFLDAINS-DGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE 600
G SETFL A+N+ + + GSLREMV+EGLR AGYETYKR CRL WEADLAESL++A+
Sbjct: 541 SGPSETFLSAVNNEEQLDGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKAL-- 600
Query: 601 HHSISEAGPETVRLDIKYSNDSLIYLNDL 618
S ++ +T +I +SN+ I ++L
Sbjct: 601 ESSDTDPDSDTKPSEIDWSNELAINFDEL 618
BLAST of Clc09G08240 vs. ExPASy Swiss-Prot
Match:
Q9LG26 (Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 SV=2)
HSP 1 Score: 209.1 bits (531), Expect = 1.4e-52
Identity = 167/638 (26.18%), Postives = 288/638 (45.14%), Query Frame = 0
Query: 16 TTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSFPWHRLHPFDTHDTAY 75
+ T + ++ V S+F + L +L++ + +DF+A+ L+ TG +S PW FD +D Y
Sbjct: 31 SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90
Query: 76 CKAKYVAEKFQILQFALCPF--SVRESNLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 135
K K AEKF ++QF +CPF R + +++P+NF +FPR EL P++ F CQ + +
Sbjct: 91 LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150
Query: 136 TSMAREGFDFDACIYDGISYLSRAQESIAKVRIGC---PTRTPSTNVVKSSSKPSVADTI 195
+A+ FDF+ CI++GISYLSR +E A R+ S+ + +AD +
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVL 210
Query: 196 FVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEP--YGLRPSMTIDVCSERQVLL 255
F R++ + W+ + + E + +RP++++ + Q+ +
Sbjct: 211 FAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRV 270
Query: 256 VLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKEL----QKLEEEENKKF 315
+ +L + DLV + K +R I + T S DK L KE ++L E + +
Sbjct: 271 LNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKIQSA 330
Query: 316 CGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKH 375
GFR+VID++++ +K IV ++ D ++SKF+ PLP++ ++F +S++ FP ++D K
Sbjct: 331 IGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKI 390
Query: 376 LMSKIGGL-----SKPNSIASALSYL-----------KNHYYAPIDLDIPIE-------A 435
L++ L S++SA S L + +++D+ I+
Sbjct: 391 LLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWN 450
Query: 436 TGNDHKFHGHNAIRLCHLFAKVCSVLKIDLSGFQSNNNNCLASMLDGCAN------VSCS 495
G H+ G++A +FA+ C+ L D ++ L+ N
Sbjct: 451 AGGKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGD 510
Query: 496 FSPYHCEHEDEDIKIWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEF-- 555
H + D V K ++V +W F + AR G E C+ F
Sbjct: 511 IIDLRTGHSNAD----NWRVSKFKYENIVLIWNFPRKLKAR-------GIKECICKAFGS 570
Query: 556 ----DVRFVDKKCAIVVFWQPGLSETFL----DAINSDGIVGSLREM--VSEG--LRAAG 600
V VD V+F L FL +SDG V L + + EG AA
Sbjct: 571 ASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAAD 630
BLAST of Clc09G08240 vs. ExPASy Swiss-Prot
Match:
Q90ZA1 (Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1)
HSP 1 Score: 106.3 bits (264), Expect = 1.3e-21
Identity = 92/349 (26.36%), Postives = 158/349 (45.27%), Query Frame = 0
Query: 25 QVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSFP--WHRLHPFDTHDTAYCKAKYVA 84
++ S+F+ L ++ I ++DF+A+ + +G S P + FDT + Y K K +
Sbjct: 2 EITRSNFKDTLPKVYKAIEEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYTKLKKHS 61
Query: 85 EKFQILQFALCPFSV--RESNLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREG 144
+F + QF LC F+ E+ + +NF++FP+ N P F CQ S + +A +G
Sbjct: 62 MEFLLFQFGLCTFNYDNTEAKYLMKSFNFYIFPK-PFNRNSPDKKFVCQSSSIDFLANQG 121
Query: 145 FDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKSSSKPSVADTIFVQRVKSRVK 204
FDF+ +GI YL++ +E + +R R +N + S S
Sbjct: 122 FDFNKVFRNGIPYLNQEEERV--LRDQYEDRRSQSNGASTMSYIS--------------- 181
Query: 205 NWKDACNSSTKTNDALLIVLEKLVVGSEPY--GLRPSMTIDVCSERQVLLVLELLMEFSD 264
++ + D ++K+V E + + SM ++ C+ Q L+ + L
Sbjct: 182 --PNSSKTPVSIPDEQKGFIDKVVERVEDFLKNEQKSMNVEPCTGYQRKLIYQTLNWKYP 241
Query: 265 DLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEEENKKFCGFREVIDMISASQ 324
+ V R I I +E++ +E++ Q E EE GF +I IS+S
Sbjct: 242 RGIHVETVESEKKERYI-VISKVDEEERKRMEQQKQAKEREELDDAVGFSRIIQAISSSG 301
Query: 325 KPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKHLMS 368
K +V ++ L D +F LP ++EF + VFPRVLD K + S
Sbjct: 302 KLVVGHNMLLDVMHTIHQFFCQLPDELNEFKEVTNCVFPRVLDTKLMAS 329
BLAST of Clc09G08240 vs. ExPASy Swiss-Prot
Match:
Q7ZU92 (Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2)
HSP 1 Score: 99.4 bits (246), Expect = 1.5e-19
Identity = 96/358 (26.82%), Postives = 148/358 (41.34%), Query Frame = 0
Query: 25 QVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSFP--WHRLHPFDTHDTAYCKAKYVA 84
+V +F+ L E+ N + ++DFI++ + TG S P + DT + Y K + +
Sbjct: 2 EVTRQNFKEVLPEVCNAVQEADFISIDGEFTGISDGPSVSALTNGLDTPEERYTKLRKHS 61
Query: 85 EKFQILQFALCPF--SVRESNLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREG 144
F + QF +C F +S I +NF++FP+ + P F CQ S + +A +G
Sbjct: 62 MNFLLFQFGVCTFRYDQNQSTYITKAFNFYIFPK-PFSRTSPDIKFICQSSSIDFLASQG 121
Query: 145 FDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKSSSKPSVADTIFVQRVKSRVK 204
FDF+ GI YL+ QE ++R R N S + T
Sbjct: 122 FDFNKVFRSGIPYLN--QEEECQLREQYEERRGQMNGAGPVSYTPPSGT----------- 181
Query: 205 NWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTIDVCSERQVLLVLELLMEFSDDL 264
CN + + V EK+ E T+D LE F L
Sbjct: 182 ---GVCNVPEDQREFIRSVEEKV----EALLKNTDQTLD----------LEPCTGFQRKL 241
Query: 265 VPVLIPAKGGGTRAIRAILTSSKEDKILL-----------EKELQKLEEEENKKFCGFRE 324
+ + +K + A+ T KE I + E++ Q+ E+EE GF
Sbjct: 242 IYQTLNSKYSKGLHVEALETEKKERFIQISKVDDEERRRREQQKQQREQEELNDAVGFSR 301
Query: 325 VIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKHLMS 368
VI IS S K +V ++ L D +F PLP +D+F VFPR+LD K + S
Sbjct: 302 VIRAISKSGKLVVGHNMLLDVMHTIHQFCGPLPEELDDFKEVAMTVFPRLLDTKLMAS 328
BLAST of Clc09G08240 vs. ExPASy Swiss-Prot
Match:
P69341 (Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2)
HSP 1 Score: 96.3 bits (238), Expect = 1.3e-18
Identity = 92/347 (26.51%), Postives = 153/347 (44.09%), Query Frame = 0
Query: 25 QVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSFP--WHRLHPFDTHDTAYCKAKYVA 84
++ S+F+S L ++ I ++DF A+ + +G S P + FDT + Y K K +
Sbjct: 2 EIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKHS 61
Query: 85 EKFQILQFALCPF--SVRESNLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHLTSMAREG 144
F + QF LC F +S I +NF++FP+ N P F CQ S + +A +G
Sbjct: 62 MDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPK-PFNRSSPDVKFVCQSSSIDFLASQG 121
Query: 145 FDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKSSSKPSVADTIFVQRVKSRVK 204
FDF+ +GI YL+ QE ++R + +N + S S + + K
Sbjct: 122 FDFNKVFRNGIPYLN--QEEERQLREQYDEKRSQSNGAGALSYTSPNTSKCPVTIPDDQK 181
Query: 205 NWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTIDVCSERQVLLVLELLMEFSDDL 264
K D ++ +E L+ E ++ ++ C+ Q L+ + L
Sbjct: 182 ----------KFIDQVVEKIEDLLQSEE----NKNLDLEPCTGFQRKLIYQTLSWKYPKG 241
Query: 265 VPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEEENKKFCGFREVIDMISASQKP 324
+ V R I I +E++ E++ E+EE GF VI I+ S K
Sbjct: 242 IHVETLETEKKERYI-VISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKL 301
Query: 325 IVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKHLMS 368
++ ++ L D +F PLP ++EF VFPR+LD K + S
Sbjct: 302 VIGHNMLLDVMHTVHQFYCPLPADLNEFKEMTTCVFPRLLDTKLMAS 330
BLAST of Clc09G08240 vs. ExPASy TrEMBL
Match:
A0A6J1GP80 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456191 PE=3 SV=1)
HSP 1 Score: 1053.1 bits (2722), Expect = 4.4e-304
Identity = 532/619 (85.95%), Postives = 563/619 (90.95%), Query Frame = 0
Query: 1 MASRFSSLQLQ-RRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFSSL+LQ RRL+T TNQ SVRQ+RN+DF CLG+LKNHISDSDFIALSLQNTGSSS
Sbjct: 1 MASRFSSLRLQRRRLHTATNQLSVRQIRNTDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHRL FDT+DTAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRD+LNI
Sbjct: 61 FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIG TPST VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGRSFLTPSTYAVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SSS+ ++AD++FVQRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
VCSERQVLLVLELL EFSDDLVPV+ PAKGGGT+AIRAILTSSKEDKILLEKELQ LEEE
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVNPAKGGGTQAIRAILTSSKEDKILLEKELQNLEEE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREV+D+ISASQKPI+SY+ LNDF FIHSKFLAPLPT +DEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPILSYNSLNDFAFIHSKFLAPLPTGMDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
LDVKHL+SKIGGLSKP SIASALSYLKNHY+APIDLDIP+EATGND KFHGHNAI LCHL
Sbjct: 361 LDVKHLISKIGGLSKPISIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILLCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAK CSVLKIDL G QS NNNCLAS LDGCANV SFSP H E EDEDIKI TKNVRKVS
Sbjct: 421 FAKACSVLKIDLGGVQS-NNNCLASKLDGCANVFGSFSPDHHESEDEDIKISTKNVRKVS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFRDGMTA+ +KTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTAQSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE-HHSISEAGPE 600
INSDGIVG L++MVSEGL+A GYETYKRVCRL LWEADLAESLERA E HHS EA PE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERASSEQHHSSFEADPE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLDI YSNDS+I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 618
BLAST of Clc09G08240 vs. ExPASy TrEMBL
Match:
A0A6J1JW45 (poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488047 PE=3 SV=1)
HSP 1 Score: 1052.0 bits (2719), Expect = 9.9e-304
Identity = 530/619 (85.62%), Postives = 560/619 (90.47%), Query Frame = 0
Query: 1 MASRFSSLQLQ-RRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFSSLQLQ RRL+ TNQ SVRQ+RNSDF CLG+LKNHISDSDFIALSLQNTGSSS
Sbjct: 1 MASRFSSLQLQRRRLHIATNQLSVRQIRNSDFYGCLGDLKNHISDSDFIALSLQNTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHRL FDT+DTAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRD+LNI
Sbjct: 61 FPWHRLQSFDTYDTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDDLNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTSMA EGFDFDACIYDGISYLSRAQESIAKVRIG P TPST VK
Sbjct: 121 GMPSYSFSCQVSHLTSMAHEGFDFDACIYDGISYLSRAQESIAKVRIGRPILTPSTYDVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SSS+ ++AD++FVQRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTID
Sbjct: 181 SSSRQTIADSVFVQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEEYGSRPSMTID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
VCSERQVLLVLELL EFSDDLVPV+IP KGGGT+AIRAI TSSKEDKILLEKELQ LEEE
Sbjct: 241 VCSERQVLLVLELLSEFSDDLVPVVIPTKGGGTQAIRAIWTSSKEDKILLEKELQNLEEE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREV+D+ISASQKPIVSY+ LNDF F+HSKFLAPLPT IDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVVDIISASQKPIVSYNSLNDFAFVHSKFLAPLPTGIDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
LDVKHL+SKIGGLSKP SIASALSYLKNHY+APIDLDIP+EATGND KFHGHNAI +CHL
Sbjct: 361 LDVKHLISKIGGLSKPTSIASALSYLKNHYFAPIDLDIPVEATGNDRKFHGHNAILVCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAK CSVLKIDL G QS NNCLAS LDGCANV SFSP H + EDEDIKI TKNVRK+S
Sbjct: 421 FAKACSVLKIDLGGVQS--NNCLASKLDGCANVFGSFSPDHHKSEDEDIKISTKNVRKIS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFRDGMTAR +KTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSE FLDA
Sbjct: 481 CRHLVFLWGFRDGMTARSMKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSEAFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEHHSIS-EAGPE 600
INSDGIVG L++MVSEGL+A GYETYKRVCRL LWEADLAESLERA EHH S EA PE
Sbjct: 541 INSDGIVGCLKDMVSEGLKATGYETYKRVCRLGLWEADLAESLERATSEHHHSSFEADPE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLDI YSNDS+I L DL
Sbjct: 601 TERLDIYYSNDSIINLADL 617
BLAST of Clc09G08240 vs. ExPASy TrEMBL
Match:
A0A5A7V1F6 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00470 PE=3 SV=1)
HSP 1 Score: 1008.4 bits (2606), Expect = 1.2e-290
Identity = 508/618 (82.20%), Postives = 550/618 (89.00%), Query Frame = 0
Query: 1 MASRFSSLQLQRRLY-TTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFS QL RRLY TTT+QWS++QVRNS+F CLG+LKNHISDSDFIALSLQ TGSSS
Sbjct: 1 MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHR PFDT DTAYCKAKY AEKFQILQF+LCPFSVR+S LIAHPYNFHLFPRDELNI
Sbjct: 61 FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVK 180
GMPSYSFSCQVSHLTS+AREGFDF A +YDGISYLSRAQESIAK ++GC T TP+T+ VK
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDGISYLSRAQESIAKAQMGCQTLTPNTDAVK 180
Query: 181 SSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTID 240
SSS+PSV DTIFVQRVKSRVKNWKDA +SS+KTNDALL L+KL+VG E YG RPS+ ID
Sbjct: 181 SSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKKLIVGIEQYGSRPSIVID 240
Query: 241 VCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEE 300
V SERQ LL LELL EFSDD+VPV+I AK GGT+AIRAILTSSKEDKILLEKELQ LE+E
Sbjct: 241 VYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSSKEDKILLEKELQNLEDE 300
Query: 301 ENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
ENKKF GFREVI+MISASQKPIVSYS L+DFTFIHSKFLAPLPTSIDEFASSLHLVFPRV
Sbjct: 301 ENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLPTSIDEFASSLHLVFPRV 360
Query: 361 LDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHL 420
L+VKHLMSKIGGLSKP SIA+ALSYLK HYYAP LDIPIEA GNDHK GHNAIRLCHL
Sbjct: 361 LEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAPGNDHKPQGHNAIRLCHL 420
Query: 421 FAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHEDEDIKIWTKNVRKVS 480
FAKVCS+LKIDLSG QSNNN CLASML+ C+NVS SFSPYH E +DED+KIW ++VRK S
Sbjct: 421 FAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHEPKDEDVKIWARDVRKAS 480
Query: 481 CRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLDA 540
CRHLVFLWGFR+GMTA LLK +LEGSHEVFCEEF VRFVDKKCAI+VF QPGLSETFLDA
Sbjct: 481 CRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKCAIIVFSQPGLSETFLDA 540
Query: 541 INSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEHHSISEAGPET 600
INSD IVGSLREMVSEGLRA GYETYKR+CR DLWEADLAESLERA I EA PET
Sbjct: 541 INSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESLERA------IFEADPET 600
Query: 601 VRLDIKYSNDSLIYLNDL 618
+LDI YSND++I L+DL
Sbjct: 601 AQLDINYSNDTVISLDDL 612
BLAST of Clc09G08240 vs. ExPASy TrEMBL
Match:
A0A6J1CPR7 (poly(A)-specific ribonuclease PARN-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013450 PE=3 SV=1)
HSP 1 Score: 995.0 bits (2571), Expect = 1.4e-286
Identity = 503/619 (81.26%), Postives = 541/619 (87.40%), Query Frame = 0
Query: 1 MASRFSSLQLQRRLYTTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSF 60
MASR SSL RRLY+T NQWSVRQVR SDF CLG+L HIS SDFIALSLQ TGSSSF
Sbjct: 1 MASRSSSLHFHRRLYSTFNQWSVRQVRKSDFHGCLGDLDGHISASDFIALSLQKTGSSSF 60
Query: 61 PWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNIG 120
PWHRL PFDT TAYCKAKY AEKFQILQFALCPFSVRES LIAHPYNFHLFPRDELNIG
Sbjct: 61 PWHRLQPFDTSHTAYCKAKYAAEKFQILQFALCPFSVRESKLIAHPYNFHLFPRDELNIG 120
Query: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNVVKS 180
MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVR+GCPT T ST V+KS
Sbjct: 121 MPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRMGCPTPTTSTYVLKS 180
Query: 181 SSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEPYGLRPSMTIDV 240
SS+ S+AD++F+QRVKSRVKNWKDACNSSTKTNDALL L+KL++GSE YG RPSMTIDV
Sbjct: 181 SSRQSIADSVFIQRVKSRVKNWKDACNSSTKTNDALLSSLKKLIIGSEQYGSRPSMTIDV 240
Query: 241 CSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQKLEEEE 300
CSERQVLLVLELL +FSDDLVPV+IPAKGGGT+AIRAILTSSK+DKILLEKELQ LEEEE
Sbjct: 241 CSERQVLLVLELLSDFSDDLVPVVIPAKGGGTQAIRAILTSSKDDKILLEKELQNLEEEE 300
Query: 301 NKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVL 360
NK+F GFREVIDMISASQKPIVSY LNDFTFIHSKFLAPLP IDEF+ SLH VFP+VL
Sbjct: 301 NKRFRGFREVIDMISASQKPIVSYGSLNDFTFIHSKFLAPLPPRIDEFSDSLHSVFPQVL 360
Query: 361 DVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEATGNDHKFHGHNAIRLCHLF 420
DV+HLM I GL+KP SI+SALSYLKNHY+AP+DLDIP+E TGN+ KFHGHNAI+LCHLF
Sbjct: 361 DVQHLMRNISGLNKPTSISSALSYLKNHYFAPVDLDIPVEGTGNERKFHGHNAIKLCHLF 420
Query: 421 AKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCEHED--EDIKIWTKNVRKV 480
KVCSVLKIDLSG Q N LAS L+GCANV SF P + E ED ED+KI T+NVRKV
Sbjct: 421 TKVCSVLKIDLSGVQFNEKP-LASNLEGCANVFASFPPCNQEPEDEGEDVKISTRNVRKV 480
Query: 481 SCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQPGLSETFLD 540
SC LVFLWGFRDGMTA LLK AL+GSHEV CEEFDVRFV KKCAI+VFWQPGLSETFLD
Sbjct: 481 SCGQLVFLWGFRDGMTAGLLKAALQGSHEVLCEEFDVRFVGKKCAILVFWQPGLSETFLD 540
Query: 541 AINSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLEHHSISEAGPE 600
AI+SDGI+GSL++MVSEGLRAA YETYKRVCRL WEADLAESLERA SEA E
Sbjct: 541 AIHSDGILGSLKDMVSEGLRAASYETYKRVCRLGHWEADLAESLERA------TSEADCE 600
Query: 601 TVRLDIKYSNDSLIYLNDL 618
T RLDI YSN+SLI LNDL
Sbjct: 601 TARLDIYYSNNSLINLNDL 612
BLAST of Clc09G08240 vs. ExPASy TrEMBL
Match:
A0A5D3CA51 (Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00350 PE=3 SV=1)
HSP 1 Score: 985.3 bits (2546), Expect = 1.1e-283
Identity = 503/635 (79.21%), Postives = 547/635 (86.14%), Query Frame = 0
Query: 1 MASRFSSLQLQRRLY-TTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSS 60
MASRFS QL RRLY TTT+QWS++QVRNS+F CLG+LKNHISDSDFIALSLQ TGSSS
Sbjct: 1 MASRFSYFQLHRRLYTTTTDQWSIKQVRNSNFHGCLGDLKNHISDSDFIALSLQRTGSSS 60
Query: 61 FPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDELNI 120
FPWHR PFDT DTAYCKAKY AEKFQILQF+LCPFSVR+S LIAHPYNFHLFPRDELNI
Sbjct: 61 FPWHRPQPFDTLDTAYCKAKYAAEKFQILQFSLCPFSVRDSKLIAHPYNFHLFPRDELNI 120
Query: 121 GMPSYSFSCQVSHLTSMAREGFDFDACIYD----GISYL-------------SRAQESIA 180
GMPSYSFSCQVSHLTS+AREGFDF A +YD G+ +L AQESIA
Sbjct: 121 GMPSYSFSCQVSHLTSIAREGFDFGAWVYDDSTMGLQWLDILQEFFFCPLRAKTAQESIA 180
Query: 181 KVRIGCPTRTPSTNVVKSSSKPSVADTIFVQRVKSRVKNWKDACNSSTKTNDALLIVLEK 240
K ++GC T TP+T+ VKSSS+PSV DTIFVQRVKSRVKNWKDA +SS+KTNDALL L+K
Sbjct: 181 KAQMGCQTLTPNTDAVKSSSEPSVFDTIFVQRVKSRVKNWKDAYDSSSKTNDALLSTLKK 240
Query: 241 LVVGSEPYGLRPSMTIDVCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSS 300
L+VG E YG RPS+ IDV SERQ LL LELL EFSDD+VPV+I AK GGT+AIRAILTSS
Sbjct: 241 LIVGIEQYGSRPSIVIDVYSERQALLALELLKEFSDDVVPVVISAKSGGTQAIRAILTSS 300
Query: 301 KEDKILLEKELQKLEEEENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLP 360
KEDKILLEKELQ LE+EENKKF GFREVI+MISASQKPIVSYS L+DFTFIHSKFLAPLP
Sbjct: 301 KEDKILLEKELQNLEDEENKKFRGFREVIEMISASQKPIVSYSSLHDFTFIHSKFLAPLP 360
Query: 361 TSIDEFASSLHLVFPRVLDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDIPIEAT 420
TSIDEFASSLHLVFPRVL+VKHLMSKIGGLSKP SIA+ALSYLK HYYAP LDIPIEA
Sbjct: 361 TSIDEFASSLHLVFPRVLEVKHLMSKIGGLSKPMSIAAALSYLKKHYYAPTYLDIPIEAP 420
Query: 421 GNDHKFHGHNAIRLCHLFAKVCSVLKIDLSGFQSNNNNCLASMLDGCANVSCSFSPYHCE 480
GNDHK GHNAIRLCHLFAKVCS+LKIDLSG QSNNN CLASML+ C+NVS SFSPYH E
Sbjct: 421 GNDHKPQGHNAIRLCHLFAKVCSLLKIDLSGVQSNNNECLASMLEKCSNVSSSFSPYHHE 480
Query: 481 HEDEDIKIWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKC 540
+DED+KIW ++VRK SCRHLVFLWGFR+GMTA LLK +LEGSHEVFCEEF VRFVDKKC
Sbjct: 481 PKDEDVKIWARDVRKASCRHLVFLWGFREGMTAPLLKASLEGSHEVFCEEFYVRFVDKKC 540
Query: 541 AIVVFWQPGLSETFLDAINSDGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESL 600
AI+VF QPGLSETFLDAINSD IVGSLREMVSEGLRA GYETYKR+CR DLWEADLAESL
Sbjct: 541 AIIVFSQPGLSETFLDAINSDCIVGSLREMVSEGLRATGYETYKRMCRFDLWEADLAESL 600
Query: 601 ERAMLEHHSISEAGPETVRLDIKYSNDSLIYLNDL 618
ERA I EA PET +LDI YSND++I L+DL
Sbjct: 601 ERA------IFEADPETAQLDINYSNDTVISLDDL 629
BLAST of Clc09G08240 vs. TAIR 10
Match:
AT3G25430.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 621.3 bits (1601), Expect = 8.3e-178
Identity = 332/629 (52.78%), Postives = 443/629 (70.43%), Query Frame = 0
Query: 1 MASRF-SSLQLQRRLYTTTNQ--WSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGS 60
M RF SS+ T NQ WSV+QV+ S+F L E++ I SDFIALSLQNTGS
Sbjct: 1 MQRRFLSSISATAGNTKTLNQGRWSVKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGS 60
Query: 61 SSFPWHRLHPFDTHDTAYCKAKYVAEKFQILQFALCPFSVRESNLIAHPYNFHLFPRDEL 120
+ WHR+ DT T+Y KAKY AE++QILQFALCPFS++ S L HPYNFHLFPRDEL
Sbjct: 61 YAAAWHRVSAIDTPQTSYLKAKYAAERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDEL 120
Query: 121 NIGMPSYSFSCQVSHLTSMAREGFDFDACIYDGISYLSRAQESIAKVRIGCPTRTPSTNV 180
GMPSYSFSCQ S LT+MAREGFDF+ CIY+GISYLSRAQES +K P S V
Sbjct: 121 KCGMPSYSFSCQASRLTAMAREGFDFNICIYEGISYLSRAQESASKFLSENPILADSVTV 180
Query: 181 VKSSSKPSVADTIFVQRVKSRVKNWKDAC-NSSTKT-NDALLIVLEKLVVGSEPYGLRPS 240
SSS +VADT+FV R++SRVKNW+ +C +S +KT +D L+ L +LV+GSE YG R
Sbjct: 181 --SSSPATVADTVFVGRIRSRVKNWRQSCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLC 240
Query: 241 MTIDVCSERQVLLVLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKELQK 300
+TIDVCSERQV L+LE+L EFSDD+VP+L+ +K GT+A+R + SSKEDK L ++EL+
Sbjct: 241 LTIDVCSERQVQLILEMLTEFSDDVVPLLVASKSRGTQAVRTVFMSSKEDKDLFKRELKD 300
Query: 301 LEEEENKKFCGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLV 360
LE+EEN++ GFREV+D IS+SQKP+VS + L+DFT IH+KFL PLP+++D+F+SSL
Sbjct: 301 LEKEENRRVRGFREVVDFISSSQKPVVSQNYLSDFTSIHAKFLGPLPSNVDDFSSSLSSA 360
Query: 361 FPRVLDVKHLMSKIGGLSKPNSIASALSYLKNHYYAPIDLDI-----PIEATGNDHKFHG 420
FP V+D+ M +I LS +++ +A+S L N ++AP+D+++ P++ H+ HG
Sbjct: 361 FPNVVDLSQFMKEISPLSNISNLPAAMSSL-NRFFAPVDVEVANQGCPVK-LDEGHQSHG 420
Query: 421 HNAIRLCHLFAKVCSVLKIDLSGFQSNNN-NCLASMLDGCANVSCSFSPYHCEHEDEDIK 480
NA+ + LFAK+C++ K DLS QSN + LAS + SCS + DE++K
Sbjct: 421 QNAVMISQLFAKLCTIQKSDLSTIQSNEDFQALASDEHANSVTSCSKNA-----GDENVK 480
Query: 481 IWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEFDVRFVDKKCAIVVFWQ 540
+W+KN R+VS +LVF+WG MTA LK L+ SH VF EFDV+++D+ AI+VFW+
Sbjct: 481 VWSKNSRRVSSENLVFIWGLGKKMTAAKLKNVLQKSHPVFAREFDVKYIDRSSAILVFWE 540
Query: 541 PGLSETFLDAINS-DGIVGSLREMVSEGLRAAGYETYKRVCRLDLWEADLAESLERAMLE 600
G SETFL A+N+ + + GSLREMV+EGLR AGYETYKR CRL WEADLAESL++A+
Sbjct: 541 SGPSETFLSAVNNEEQLDGSLREMVAEGLRGAGYETYKRACRLGFWEADLAESLDKAL-- 600
Query: 601 HHSISEAGPETVRLDIKYSNDSLIYLNDL 618
S ++ +T +I +SN+ I ++L
Sbjct: 601 ESSDTDPDSDTKPSEIDWSNELAINFDEL 618
BLAST of Clc09G08240 vs. TAIR 10
Match:
AT1G55870.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 209.1 bits (531), Expect = 9.8e-54
Identity = 167/638 (26.18%), Postives = 288/638 (45.14%), Query Frame = 0
Query: 16 TTTNQWSVRQVRNSDFRSCLGELKNHISDSDFIALSLQNTGSSSFPWHRLHPFDTHDTAY 75
+ T + ++ V S+F + L +L++ + +DF+A+ L+ TG +S PW FD +D Y
Sbjct: 31 SATAAFPLKHVTRSNFETTLNDLRSLVKAADFVAIDLEMTGVTSAPWRDSLEFDRYDVRY 90
Query: 76 CKAKYVAEKFQILQFALCPF--SVRESNLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 135
K K AEKF ++QF +CPF R + +++P+NF +FPR EL P++ F CQ + +
Sbjct: 91 LKVKDSAEKFAVVQFGVCPFRWDSRTQSFVSYPHNFFVFPRQELTFDPPAHEFLCQTTSM 150
Query: 136 TSMAREGFDFDACIYDGISYLSRAQESIAKVRIGC---PTRTPSTNVVKSSSKPSVADTI 195
+A+ FDF+ CI++GISYLSR +E A R+ S+ + +AD +
Sbjct: 151 DFLAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVL 210
Query: 196 FVQRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEP--YGLRPSMTIDVCSERQVLL 255
F R++ + W+ + + E + +RP++++ + Q+ +
Sbjct: 211 FAARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRV 270
Query: 256 VLELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKEL----QKLEEEENKKF 315
+ +L + DLV + K +R I + T S DK L KE ++L E + +
Sbjct: 271 LNSVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKIQSA 330
Query: 316 CGFREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKH 375
GFR+VID++++ +K IV ++ D ++SKF+ PLP++ ++F +S++ FP ++D K
Sbjct: 331 IGFRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKI 390
Query: 376 LMSKIGGL-----SKPNSIASALSYL-----------KNHYYAPIDLDIPIE-------A 435
L++ L S++SA S L + +++D+ I+
Sbjct: 391 LLNVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWN 450
Query: 436 TGNDHKFHGHNAIRLCHLFAKVCSVLKIDLSGFQSNNNNCLASMLDGCAN------VSCS 495
G H+ G++A +FA+ C+ L D ++ L+ N
Sbjct: 451 AGGKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGD 510
Query: 496 FSPYHCEHEDEDIKIWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEF-- 555
H + D V K ++V +W F + AR G E C+ F
Sbjct: 511 IIDLRTGHSNAD----NWRVSKFKYENIVLIWNFPRKLKAR-------GIKECICKAFGS 570
Query: 556 ----DVRFVDKKCAIVVFWQPGLSETFL----DAINSDGIVGSLREM--VSEG--LRAAG 600
V VD V+F L FL +SDG V L + + EG AA
Sbjct: 571 ASVTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAAD 630
BLAST of Clc09G08240 vs. TAIR 10
Match:
AT1G55870.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 118.2 bits (295), Expect = 2.3e-26
Identity = 124/516 (24.03%), Postives = 216/516 (41.86%), Query Frame = 0
Query: 136 MAREGFDFDACIYDGISYLSRAQESIAKVRIGC---PTRTPSTNVVKSSSKPSVADTIFV 195
+A+ FDF+ CI++GISYLSR +E A R+ S+ + +AD +F
Sbjct: 4 LAKYQFDFNTCIHEGISYLSRREEEEASKRLKMLHGEDGIDSSGETEELKLVRLADVLFA 63
Query: 196 QRVKSRVKNWKDACNSSTKTNDALLIVLEKLVVGSEP--YGLRPSMTIDVCSERQVLLVL 255
R++ + W+ + + E + +RP++++ + Q+ ++
Sbjct: 64 ARMEKLLNEWRSGLLHGGNASSEFPRISNGSNQSMETVFHHMRPALSLKGFTSHQLRVLN 123
Query: 256 ELLMEFSDDLVPVLIPAKGGGTRAIRAILTSSKEDKILLEKEL----QKLEEEENKKFCG 315
+L + DLV + K +R I + T S DK L KE ++L E + + G
Sbjct: 124 SVLRKHFGDLVYIHSNDKSSSSRDI-VVYTDSDSDKENLMKEAKDERKRLAERKIQSAIG 183
Query: 316 FREVIDMISASQKPIVSYSPLNDFTFIHSKFLAPLPTSIDEFASSLHLVFPRVLDVKHLM 375
FR+VID++++ +K IV ++ D ++SKF+ PLP++ ++F +S++ FP ++D K L+
Sbjct: 184 FRQVIDLLASEKKLIVGHNCFLDIAHVYSKFVGPLPSTAEKFVASINSHFPYIVDTKILL 243
Query: 376 SKIGGL-----SKPNSIASALSYL-----------KNHYYAPIDLDIPIE-------ATG 435
+ L S++SA S L + +++D+ I+ G
Sbjct: 244 NVNPMLHQRMKKSSTSLSSAFSSLCPQIEFSSRSSDSFLQQRVNIDVEIDNVRCSNWNAG 303
Query: 436 NDHKFHGHNAIRLCHLFAKVCSVLKIDLSGFQSNNNNCLASMLDGCAN------VSCSFS 495
H+ G++A +FA+ C+ L D ++ L+ N
Sbjct: 304 GKHE-AGYDAFMTGCIFAQACNHLGFDFKQHSQLDDFAQNEKLEKYINRLYLSWTRGDII 363
Query: 496 PYHCEHEDEDIKIWTKNVRKVSCRHLVFLWGFRDGMTARLLKTALEGSHEVFCEEF---- 555
H + D V K ++V +W F + AR G E C+ F
Sbjct: 364 DLRTGHSNAD----NWRVSKFKYENIVLIWNFPRKLKAR-------GIKECICKAFGSAS 423
Query: 556 --DVRFVDKKCAIVVFWQPGLSETFL----DAINSDGIVGSLREM--VSEG--LRAAGYE 600
V VD V+F L FL +SDG V L + + EG AA YE
Sbjct: 424 VTSVYHVDDSAVFVLFKNSELVWDFLALKRQLESSDGPVSVLHPLSKILEGGNTGAADYE 483
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038899639.1 | 0.0e+00 | 89.97 | poly(A)-specific ribonuclease PARN-like isoform X2 [Benincasa hispida] | [more] |
| XP_038899638.1 | 0.0e+00 | 85.54 | poly(A)-specific ribonuclease PARN-like isoform X1 [Benincasa hispida] | [more] |
| XP_023547854.1 | 2.8e-305 | 86.27 | poly(A)-specific ribonuclease PARN-like isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022953758.1 | 9.1e-304 | 85.95 | poly(A)-specific ribonuclease PARN-like isoform X1 [Cucurbita moschata] | [more] |
| KAG6576047.1 | 9.1e-304 | 85.78 | Poly(A)-specific ribonuclease PARN-like protein, partial [Cucurbita argyrosperma... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8W4C3 | 1.2e-176 | 52.78 | Poly(A)-specific ribonuclease PARN-like OS=Arabidopsis thaliana OX=3702 GN=At3g2... | [more] |
| Q9LG26 | 1.4e-52 | 26.18 | Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana OX=3702 GN=PARN PE=1 ... | [more] |
| Q90ZA1 | 1.3e-21 | 26.36 | Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1 | [more] |
| Q7ZU92 | 1.5e-19 | 26.82 | Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2 | [more] |
| P69341 | 1.3e-18 | 26.51 | Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1GP80 | 4.4e-304 | 85.95 | poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita moschata OX=3662... | [more] |
| A0A6J1JW45 | 9.9e-304 | 85.62 | poly(A)-specific ribonuclease PARN-like isoform X1 OS=Cucurbita maxima OX=3661 G... | [more] |
| A0A5A7V1F6 | 1.2e-290 | 82.20 | Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| A0A6J1CPR7 | 1.4e-286 | 81.26 | poly(A)-specific ribonuclease PARN-like isoform X2 OS=Momordica charantia OX=367... | [more] |
| A0A5D3CA51 | 1.1e-283 | 79.21 | Poly(A)-specific ribonuclease PARN-like OS=Cucumis melo var. makuwa OX=1194695 G... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G25430.1 | 8.3e-178 | 52.78 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT1G55870.1 | 9.8e-54 | 26.18 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
| AT1G55870.2 | 2.3e-26 | 24.03 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
