Clc09G08120 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGAGAAAAAAAAAATTAAAATTTAAAATATATTTAAAACTTAAAAAAGGTCCCATCCCCATCCTTTTTCCAATACCCAAAATCGGAGACCAAAAGCGGAACTATGGATTCTTCTCGCTTACTCAATCTTCTTCTCCTTCTCTGTTTCGCCGCCACCGCCGCGGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTGCACAGTAAGATCTCCATTTCCTTTCACTAAAAATATACATTCAAAAACACTAATTCTTCAACCACGCTACAAAATTAGGTCGAAATCCTCTCGTAATCTTACAGTCGATTGAGATTTTTTCCTAGATATTCTCACAAACACCTCGACGCATTTGCATTTACATTAGGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGGGCTCATGAACGGTACGGATCTGAAATGACGTTAATGGAAGCGGCGGCTGCGGCGGACGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCACTGTTGAATTCGTATGCTAGAAGAAGAGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCACTTCAGTCTCAACGCTTTGCTTTTGCTAATGAGTCTTGCAATTAGCTAACCAACTAGTTGGTATGTTGGAGGGTTAGATGGATTTGTCTGGTTGAACAACAAGTTTGATAATCTTTGTCAATGGATGTTTGACTCGGGTTTCACCAAAAAAGGAAAAGTATAAAAGTTGACACACATTCAACTATACATCAAAAGTAAAAGATTGGAGAAGTGAAATAACAAAATAAGGAGATATGTGTTATGTCAATGAGCTATGTTGTTCATACCCAACAAGCCAATGGACATTGAGTTGGGTCCTTACACGAAGAAAACTAGCTATAGATACAGGTTTCTTTAGTCAAATGAGCAAACATAGAGACATGTTGGATTAATTTTATATATATATATATATTATGAACTAATAATTATATCAATTCAAAACAATTTGAACTTTGAACTCTTGTAAATGTATCAATTTACACCTTATCCTCTAGATTTTGTT AAAAGAGAAAAAAAAAATTAAAATTTAAAATATATTTAAAACTTAAAAAAGGTCCCATCCCCATCCTTTTTCCAATACCCAAAATCGGAGACCAAAAGCGGAACTATGGATTCTTCTCGCTTACTCAATCTTCTTCTCCTTCTCTGTTTCGCCGCCACCGCCGCGGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGGGCTCATGAACGGTACGGATCTGAAATGACGTTAATGGAAGCGGCGGCTGCGGCGGACGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCACTGTTGAATTCGTATGCTAGAAGAAGAGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCACTTCAGTCTCAACGCTTTGCTTTTGCTAATGAGTCTTGCAATTAGCTAACCAACTAGTTGGTATGTTGGAGGGTTAGATGGATTTGTCTGGTTGAACAACAAGTTTGATAATCTTTGTCAATGGATGTTTGACTCGGGTTTCACCAAAAAAGGAAAAGTATAAAAGTTGACACACATTCAACTATACATCAAAAGTAAAAGATTGGAGAAGTGAAATAACAAAATAAGGAGATATGTGTTATGTCAATGAGCTATGTTGTTCATACCCAACAAGCCAATGGACATTGAGTTGGGTCCTTACACGAAGAAAACTAGCTATAGATACAGGTTTCTTTAGTCAAATGAGCAAACATAGAGACATGTTGGATTAATTTTATATATATATATATATTATGAACTAATAATTATATCAATTCAAAACAATTTGAACTTTGAACTCTTGTAAATGTATCAATTTACACCTTATCCTCTAGATTTTGTT ATGGATTCTTCTCGCTTACTCAATCTTCTTCTCCTTCTCTGTTTCGCCGCCACCGCCGCGGAAGCAGCATCAACGCGCCGCCCTGGATTTCTCTTCTCAAGAACCAGAGGAAGATGCACTGCACAGTTCTGGAGTAGTAGGAGAGAGGCTTGGCCGCGGATGGCGCCGGAATCGGCGACGGTAGCGAAGATTTTCGGATCGAGGGCTCATGAACGGTACGGATCTGAAATGACGTTAATGGAAGCGGCGGCTGCGGCGGACGAGGAAGAGGAGGCGTTCGGTAGAGTAGTGAAGGAGGCAACTGTAGCACTGTTGAATTCGTATGCTAGAAGAAGAGAGTTTCCATATTCGGCTTGGGAAGTGAAGACATTGTTCATCAAAGCATTGGTTTCTAAAGAGGCTGCTGCACTTCAGTCTCAACGCTTTGCTTTTGCTAATGAGTCTTGCAATTAG MDSSRLLNLLLLLCFAATAAEAASTRRPGFLFSRTRGRCTAQFWSSRREAWPRMAPESATVAKIFGSRAHERYGSEMTLMEAAAAADEEEEAFGRVVKEATVALLNSYARRREFPYSAWEVKTLFIKALVSKEAAALQSQRFAFANESCN Homology
BLAST of Clc09G08120 vs. NCBI nr
Match: XP_038899192.1 (uncharacterized protein LOC120086555 [Benincasa hispida]) HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65 Identity = 144/158 (91.14%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of Clc09G08120 vs. NCBI nr
Match: XP_004148954.1 (uncharacterized protein LOC101220310 [Cucumis sativus] >KGN44734.1 hypothetical protein Csa_015820 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 3.7e-65 Identity = 137/151 (90.73%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of Clc09G08120 vs. NCBI nr
Match: XP_022991546.1 (uncharacterized protein LOC111488125 [Cucurbita maxima]) HSP 1 Score: 235.0 bits (598), Expect = 4.3e-58 Identity = 127/151 (84.11%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of Clc09G08120 vs. NCBI nr
Match: XP_008451248.2 (PREDICTED: uncharacterized protein LOC103492595 [Cucumis melo] >KAA0059636.1 uncharacterized protein E6C27_scaffold54G00680 [Cucumis melo var. makuwa]) HSP 1 Score: 233.4 bits (594), Expect = 1.3e-57 Identity = 129/149 (86.58%), Postives = 130/149 (87.25%), Query Frame = 0
BLAST of Clc09G08120 vs. NCBI nr
Match: TYK08167.1 (uncharacterized protein E5676_scaffold886G00560 [Cucumis melo var. makuwa]) HSP 1 Score: 232.3 bits (591), Expect = 2.8e-57 Identity = 128/149 (85.91%), Postives = 130/149 (87.25%), Query Frame = 0
BLAST of Clc09G08120 vs. ExPASy TrEMBL
Match: A0A0A0K735 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G375760 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65 Identity = 137/151 (90.73%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of Clc09G08120 vs. ExPASy TrEMBL
Match: A0A6J1JR18 (uncharacterized protein LOC111488125 OS=Cucurbita maxima OX=3661 GN=LOC111488125 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58 Identity = 127/151 (84.11%), Postives = 135/151 (89.40%), Query Frame = 0
BLAST of Clc09G08120 vs. ExPASy TrEMBL
Match: A0A5A7UZL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00680 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.1e-58 Identity = 129/149 (86.58%), Postives = 130/149 (87.25%), Query Frame = 0
BLAST of Clc09G08120 vs. ExPASy TrEMBL
Match: A0A1S3BQF6 (uncharacterized protein LOC103492595 OS=Cucumis melo OX=3656 GN=LOC103492595 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 6.1e-58 Identity = 129/149 (86.58%), Postives = 130/149 (87.25%), Query Frame = 0
BLAST of Clc09G08120 vs. ExPASy TrEMBL
Match: A0A5D3C871 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00560 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 1.4e-57 Identity = 128/149 (85.91%), Postives = 130/149 (87.25%), Query Frame = 0
BLAST of Clc09G08120 vs. TAIR 10
Match: AT2G20515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; Has 71 Blast hits to 71 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 140.6 bits (353), Expect = 1.0e-33 Identity = 77/149 (51.68%), Postives = 105/149 (70.47%), Query Frame = 0
BLAST of Clc09G08120 vs. TAIR 10
Match: AT2G16630.1 (Pollen Ole e 1 allergen and extensin family protein ) HSP 1 Score: 45.1 bits (105), Expect = 5.9e-05 Identity = 41/112 (36.61%), Postives = 58/112 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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