Clc09G07460 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G07460
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Lysine-rich arabinogalactan protein like
Location	ClcChr09: 5989228 .. 5990142 (+)
RNA-Seq Expression	Clc09G07460
Synteny	Clc09G07460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAGATGAGGAACAAGCCGCCCGATTGATTCTACTTCCTACTTCAATCGCTCGTAGAAAACAGCATTTCATCAATGAAACCCACAAACCCCATTACCAATTTCAGGTCAGTTCATCTTTCTTCTCCTCCGTTTTCTTTTTTCCGATTCTGTTGAACCATTTCTGTGTTATTCTTAAGCAGCATTTTGTTTCTTTCTTGTTGTTATTGTTTCTTTAGATTAAGGATTTCTCGAGTTCGTCGTTGATTTGATGTTCTTCGGTGTTTACTGAGATTATGAGTTTTGGATCTTTGAATCGATTTTGCAATTGAATGCTTTTGGAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGCTATCGTGTCAAGACTCTAGAATCGGGTCGATTTGGGAATTTTACGATTAAAGAAGGAAAAGGGAAAAATCATAATCGATTGAGTTTTCAATCAGGGACAGGATTTCGCCCTACTCCATTGGAGATTTCTTCAATACCTGTTTATTGCTTTTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAGTTCCTAGAAGTACCCCGATTCCGATTAATGAGAGCATTGATTTTGATGAACATTGCTGTTATAAGAGACTTTCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAGATTTTCAATCCGAGGAAATAGAACTGTATCGCTCGAATTGCCCACTAATTCAGTTGAAAAAATTCACCCTGTTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCTATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTGACTCTGAATGA

mRNA sequence

ATGAACAAAGATGAGGAACAAGCCGCCCGATTGATTCTACTTCCTACTTCAATCGCTCGTAGAAAACAGCATTTCATCAATGAAACCCACAAACCCCATTACCAATTTCAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGCTATCGTGTCAAGACTCTAGAATCGGGTCGATTTGGGAATTTTACGATTAAAGAAGGAAAAGGGAAAAATCATAATCGATTGAGTTTTCAATCAGGGACAGGATTTCGCCCTACTCCATTGGAGATTTCTTCAATACCTGTTTATTGCTTTTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAGTTCCTAGAAGTACCCCGATTCCGATTAATGAGAGCATTGATTTTGATGAACATTGCTGTTATAAGAGACTTTCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAGATTTTCAATCCGAGGAAATAGAACTGTATCGCTCGAATTGCCCACTAATTCAGTTGAAAAAATTCACCCTGTTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCTATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTGACTCTGAATGA

Coding sequence (CDS)

ATGAACAAAGATGAGGAACAAGCCGCCCGATTGATTCTACTTCCTACTTCAATCGCTCGTAGAAAACAGCATTTCATCAATGAAACCCACAAACCCCATTACCAATTTCAGTTTGATTCTGCGATGGAAACATTGGTGATTGTAGAACAGTACAGAGATGAGTTCTGCTATCGTGTCAAGACTCTAGAATCGGGTCGATTTGGGAATTTTACGATTAAAGAAGGAAAAGGGAAAAATCATAATCGATTGAGTTTTCAATCAGGGACAGGATTTCGCCCTACTCCATTGGAGATTTCTTCAATACCTGTTTATTGCTTTTCTTCCCCCAAAACACCACCCCCTTCCGCCGCAACAGTTCCTAGAAGTACCCCGATTCCGATTAATGAGAGCATTGATTTTGATGAACATTGCTGTTATAAGAGACTTTCATTTCCTGAGCTTTGGGCTGGACCAACTTACTCAAATTCACCCCCTGCAAGTTCATTGCCAATGCCCAGATTTTCAATCCGAGGAAATAGAACTGTATCGCTCGAATTGCCCACTAATTCAGTTGAAAAAATTCACCCTGTTGTGAAATCTGCACCACCATCCCCAACTAGGGGCCATACTCATCCTTCTTCAAGAGAGCTATTCCATGGTGCTGATTCTGCTACAAGAACACTTAGAAGAATCCTTAACCTTGATGTTGACTCTGAATGA

Protein sequence

MNKDEEQAARLILLPTSIARRKQHFINETHKPHYQFQFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNSPPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADSATRTLRRILNLDVDSE

Homology

[Close]

BLAST of Clc09G07460 vs. NCBI nr
Match: XP_038899008.1 (uncharacterized protein LOC120086432 [Benincasa hispida])

HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93
Identity = 173/196 (88.27%), Postives = 183/196 (93.37%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +FDSAMETLVIVEQYRDEFCYRVKTLESGRFGN TIK+     HNRLSFQ GTGFRP PL
Sbjct: 4   EFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNLTIKD-----HNRLSFQPGTGFRPPPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVYCFSSPKTPPPSAAT+P S  I +NESIDFDEHCCYKR+SFPELWAGPTYSNS
Sbjct: 64  EISSIPVYCFSSPKTPPPSAATIPISGEICVNESIDFDEHCCYKRISFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLELPTNSVEKIHP+VKSAPPSPTRG+THPSSRE FHGADS
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGYTHPSSREPFHGADS 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 194

[Close]

BLAST of Clc09G07460 vs. NCBI nr
Match: XP_011659294.1 (uncharacterized protein LOC105436159 [Cucumis sativus] >XP_011659295.1 uncharacterized protein LOC105436159 [Cucumis sativus] >KGN44798.1 hypothetical protein Csa_016449 [Cucumis sativus])

HSP 1 Score: 309.3 bits (791), Expect = 2.8e-80
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVI+EQYRDEFC+R+K LESGRFGN TIK+     HNR        FRPTPL
Sbjct: 4   EFGSAMETLVIIEQYRDEFCHRIKPLESGRFGNLTIKD-----HNRFR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVYCFSSPKT PPS A +P +    +NESIDFD HCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYCFSSPKT-PPSCAPIPINEKNCVNESIDFDAHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLELPTNSVEKIHP+VKSAPPSPTRGHTHPSSRE  HGAD 
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGHTHPSSREPCHGADC 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. NCBI nr
Match: KAA0064057.1 (uncharacterized protein E6C27_scaffold99G00600 [Cucumis melo var. makuwa] >TYK26216.1 uncharacterized protein E5676_scaffold111G001460 [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 7.6e-78
Identity = 156/196 (79.59%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPL
Sbjct: 4   EFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKD-----HNRLR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVY FSSPKTPPP  A +P +  I +NESIDFDEHCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYYFSSPKTPPP-FAPIPINGKICVNESIDFDEHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLE PTNSVEK+H +VKSAPPSPTRG+THPSSRE  H ADS
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADS 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. NCBI nr
Match: XP_008451331.1 (PREDICTED: uncharacterized protein LOC103492654 [Cucumis melo] >XP_008451332.1 PREDICTED: uncharacterized protein LOC103492654 [Cucumis melo])

HSP 1 Score: 299.3 bits (765), Expect = 2.9e-77
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPL
Sbjct: 4   EFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKD-----HNRLR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVY FSSPKTPPP  A +P +  I ++ESIDFDEHCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYYFSSPKTPPP-FAPIPINGKICVDESIDFDEHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLE PTNSVEK+H +VKSAPPSPTRG+THPSSRE  H ADS
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADS 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. NCBI nr
Match: XP_023548736.1 (uncharacterized protein LOC111807302 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 6.1e-67
Identity = 147/214 (68.69%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +FDSAMETLVIVEQYRDEFCY  KTLES R GN  IKEGK KN           FRP PL
Sbjct: 4   EFDSAMETLVIVEQYRDEFCYLAKTLESDRLGNLMIKEGKRKNQ----------FRPNPL 63

Query: 97  EISSIPVYCFSSPKTPPPSA-------ATVPRSTPIPIN------ESIDFDEHCCYKRLS 156
           +ISSIPVY FSSP+TPPPSA       +T+ RS  I IN      ES +FDEHCCY+RLS
Sbjct: 64  KISSIPVYLFSSPRTPPPSADYNCTPISTISRSALISINREICRRESNEFDEHCCYERLS 123

Query: 157 FPELWAGPTYSNSPPASSLPMPRFSIRGNRTVSLELPTN----SVEKIHPVVKSAPPSPT 216
           FPELWAGPTYSNSPPASSLPMP+FS+ GNRTVSL+LPTN    SVEKIH         PT
Sbjct: 124 FPELWAGPTYSNSPPASSLPMPKFSMPGNRTVSLDLPTNSAAESVEKIH---------PT 183

Query: 217 RG-HTHPSSRELFHGADSATRTLRRILNLDVDSE 233
           RG +THPS+RE FHGADSATRTLRRILNLD+DSE
Sbjct: 184 RGRYTHPSTREPFHGADSATRTLRRILNLDIDSE 198

[Close]

BLAST of Clc09G07460 vs. ExPASy TrEMBL
Match: A0A0A0K5M6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388310 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 156/196 (79.59%), Postives = 168/196 (85.71%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVI+EQYRDEFC+R+K LESGRFGN TIK+     HNR        FRPTPL
Sbjct: 4   EFGSAMETLVIIEQYRDEFCHRIKPLESGRFGNLTIKD-----HNRFR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVYCFSSPKT PPS A +P +    +NESIDFD HCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYCFSSPKT-PPSCAPIPINEKNCVNESIDFDAHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLELPTNSVEKIHP+VKSAPPSPTRGHTHPSSRE  HGAD 
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLELPTNSVEKIHPIVKSAPPSPTRGHTHPSSREPCHGADC 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. ExPASy TrEMBL
Match: A0A5D3DRH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001460 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 3.7e-78
Identity = 156/196 (79.59%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPL
Sbjct: 4   EFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKD-----HNRLR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVY FSSPKTPPP  A +P +  I +NESIDFDEHCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYYFSSPKTPPP-FAPIPINGKICVNESIDFDEHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLE PTNSVEK+H +VKSAPPSPTRG+THPSSRE  H ADS
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADS 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. ExPASy TrEMBL
Match: A0A1S3BR78 (uncharacterized protein LOC103492654 OS=Cucumis melo OX=3656 GN=LOC103492654 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.4e-77
Identity = 155/196 (79.08%), Postives = 167/196 (85.20%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +F SAMETLVIVEQYRDEFCYRVK LES RFGN TIK+     HNRL       FRPTPL
Sbjct: 4   EFGSAMETLVIVEQYRDEFCYRVKPLESSRFGNVTIKD-----HNRLR------FRPTPL 63

Query: 97  EISSIPVYCFSSPKTPPPSAATVPRSTPIPINESIDFDEHCCYKRLSFPELWAGPTYSNS 156
           EISSIPVY FSSPKTPPP  A +P +  I ++ESIDFDEHCCYKRLSFPELWAGPTYSNS
Sbjct: 64  EISSIPVYYFSSPKTPPP-FAPIPINGKICVDESIDFDEHCCYKRLSFPELWAGPTYSNS 123

Query: 157 PPASSLPMPRFSIRGNRTVSLELPTNSVEKIHPVVKSAPPSPTRGHTHPSSRELFHGADS 216
           PPASSLP+P+FSIRGNRTVSLE PTNSVEK+H +VKSAPPSPTRG+THPSSRE  H ADS
Sbjct: 124 PPASSLPIPKFSIRGNRTVSLESPTNSVEKVHQIVKSAPPSPTRGNTHPSSREPCHCADS 183

Query: 217 ATRTLRRILNLDVDSE 233
           ATRTLRRILNLDV+SE
Sbjct: 184 ATRTLRRILNLDVNSE 187

[Close]

BLAST of Clc09G07460 vs. ExPASy TrEMBL
Match: A0A6J1GP91 (uncharacterized protein LOC111455884 OS=Cucurbita moschata OX=3662 GN=LOC111455884 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.5e-67
Identity = 147/215 (68.37%), Postives = 159/215 (73.95%), Query Frame = 0


Query: 37  QFDSAMETLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPL 96
           +FDSAMETLVIVEQYRDEFCY  KTLES R GN TIKEGK KN           FRP PL
Sbjct: 4   EFDSAMETLVIVEQYRDEFCYLAKTLESDRLGNLTIKEGKRKNQ----------FRPNPL 63

Query: 97  EISSIPVYCFSSPKTPPPSA-------ATVPRSTPIPIN-------ESIDFDEHCCYKRL 156
           +ISSIPVY FSSP+TPPPSA       +T+ RS  I IN       ES +FDEHCCY+RL
Sbjct: 64  KISSIPVYLFSSPRTPPPSADYNCTPISTISRSAVISINREICRREESNEFDEHCCYERL 123

Query: 157 SFPELWAGPTYSNSPPASSLPMPRFSIRGNRTVSLELPTN----SVEKIHPVVKSAPPSP 216
           SFPELWAGPTYSNSPPASSLPMP+FS+ GNRTVSLE PTN    SVEKIH         P
Sbjct: 124 SFPELWAGPTYSNSPPASSLPMPKFSMPGNRTVSLEFPTNSAAESVEKIH---------P 183

Query: 217 TRG-HTHPSSRELFHGADSATRTLRRILNLDVDSE 233
           T G +THPS+RE FHGADSATRTLRRILNLD+DSE
Sbjct: 184 TWGRYTHPSTREPFHGADSATRTLRRILNLDIDSE 199

[Close]

BLAST of Clc09G07460 vs. ExPASy TrEMBL
Match: A0A6J1JND6 (uncharacterized protein LOC111488454 OS=Cucurbita maxima OX=3661 GN=LOC111488454 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 4.9e-62
Identity = 140/209 (66.99%), Postives = 152/209 (72.73%), Query Frame = 0


Query: 42  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSI 101
           METLVIVEQYRDEFC   KTLES R GN TIKEGK KN           FRP PL+ISSI
Sbjct: 1   METLVIVEQYRDEFCCLAKTLESDRLGNLTIKEGKRKNQ----------FRPNPLKISSI 60

Query: 102 PVYCFSSPKTPPPSA-------ATVPRSTPIPIN------ESIDFDEHCCYKRLSFPELW 161
           PVY FSSP+TPPPSA       +T+ RS  I IN      ES +FDEHCCY+RLSFPELW
Sbjct: 61  PVYLFSSPRTPPPSADYNCTPISTISRSALISINGEICRRESNEFDEHCCYERLSFPELW 120

Query: 162 AGPTYSNSPPASSLPMPRFSIRGNRTVSLELPTN----SVEKIHPVVKSAPPSPTRG-HT 221
           AGPTYSNSPPA+SLPMP+FS+ GNRTVSL+L TN    SVEKIH         PTRG +T
Sbjct: 121 AGPTYSNSPPANSLPMPKFSMPGNRTVSLDLHTNSAAESVEKIH---------PTRGRYT 180

Query: 222 HPSSRELFHGADSATRTLRRILNLDVDSE 233
           HPS  E FHGADSATRTLRRILNLD+DSE
Sbjct: 181 HPSKLEPFHGADSATRTLRRILNLDIDSE 190

[Close]

BLAST of Clc09G07460 vs. TAIR 10
Match: AT4G02715.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 111.7 bits (278), Expect = 8.0e-25
Identity = 80/210 (38.10%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 42  METLVIVEQYRDEFCYRVKTLESGRFGNFTIKEGKGKNHNRLSFQSGTGFRPTPLEISSI 101
           METL++  ++RD++ Y  K+L   RF +   K    +  N  +FQSG G  P P   SS 
Sbjct: 1   METLIVAVEHRDQY-YGKKSLGHDRFRSAPSK--TFRQINCRTFQSGVGLLPRPKRTSST 60

Query: 102 PVY--CFSSPKTPPPSAATVP----------RSTPIPINESIDFDEHCC-------YKRL 161
           P+     S  ++P    + +P          R++PIPI          C        + L
Sbjct: 61  PLTKGALSQVQSPRSPKSVLPVFHHPSVDSGRTSPIPIANCRGSQIRRCSSEFVDKRRSL 120

Query: 162 SFPELWAGPTYSNSPPASSLPMPRFSIRGNRTVSLELPT-NSVEKIHPVVKSAPPSPTRG 221
           S+ ELWAGPTYSNSPP +S+P+P+FS++  RTVSL  P  +S   I  V KSAP SPT  
Sbjct: 121 SYSELWAGPTYSNSPPPASVPIPKFSLQQKRTVSLTFPAPDSAVDIREVAKSAPVSPTSS 180

Query: 222 HTHPSSRELFHGADSATRTLRRILNLDVDS 232
             +P     F    SAT TLRR+LNL++++
Sbjct: 181 GDNP-----FRSTVSATMTLRRMLNLELET 202

The following BLAST results are available for this feature:

BLAST of Clc09G07460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899008.1	1.3e-93	88.27	uncharacterized protein LOC120086432 [Benincasa hispida]	[more]
XP_011659294.1	2.8e-80	79.59	uncharacterized protein LOC105436159 [Cucumis sativus] >XP_011659295.1 uncharact...	[more]
KAA0064057.1	7.6e-78	79.59	uncharacterized protein E6C27_scaffold99G00600 [Cucumis melo var. makuwa] >TYK26...	[more]
XP_008451331.1	2.9e-77	79.08	PREDICTED: uncharacterized protein LOC103492654 [Cucumis melo] >XP_008451332.1 P...	[more]
XP_023548736.1	6.1e-67	68.69	uncharacterized protein LOC111807302 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc09G07460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G07460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5M6	1.4e-80	79.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G388310 PE=4 SV=1	[more]
A0A5D3DRH9	3.7e-78	79.59	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BR78	1.4e-77	79.08	uncharacterized protein LOC103492654 OS=Cucumis melo OX=3656 GN=LOC103492654 PE=...	[more]
A0A6J1GP91	6.5e-67	68.37	uncharacterized protein LOC111455884 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A6J1JND6	4.9e-62	66.99	uncharacterized protein LOC111488454 OS=Cucurbita maxima OX=3661 GN=LOC111488454...	[more]

BLAST of Clc09G07460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02715.1	8.0e-25	38.10	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 148..167 e-value: 3.5E-6 score: 27.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..215
None	No IPR available	PANTHER	PTHR35306:SF1	BNAA03G57290D PROTEIN	coord: 42..231
None	No IPR available	PANTHER	PTHR35306	BNAA03G57290D PROTEIN	coord: 42..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G07460.2	Clc09G07460.2	mRNA