Clc09G07350 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTTCAGCCACGGTGCTGATTGTGTTTTGGTTTCTTTCTAAATCCTCAAAGAAGTAGATGATGCTTCTAAGTGGTGGATAGAACAGAAGAAGTTAGAGTTAGTTGTAGTCAAGATTCGCTATTAAGAGATTTCCAGGATGAACGCGGAGGACATTATCGAGAACTGGAAGAACCTTCGTTTATCAGATGAAGAAAAAGGAACTAAGAGTGAATTCGATCATCAGCTGGGATCCATGATTGAAGACCAATTGGATTTATGTCTAGTCGGCAAATTGCTGACCCCTCGTATAATAGCTCCAGGAATAATCAAGAATGTTTTTGCAAATGCCTGGAGAACAAAGGATGGGTTTCAGTGTTGAAGGTCTGGGTAGGAACATCTTTCTTTTTAAATTCGACTCAAGGAAGGACAAAGAGTTTGTAGTTCGTTTGGGACCTTGGCTCATGGATAATGCTTTATTGGCGCTAGAGGCTCCTAAAGCAAACATAAAAGTCTCACAGATGAAATTTGGAAAAGCTGCCTTCTGGGTCCGTTTCTTGGATATCCCTCTTGGTTTTCAAAACAAGTTTATGGCAAAACGGCTAGGAAATGCGATGGGAGAATTCTTGGAAGCTGAATGTAACCAGGATAATTTCTGTTGGGGAGAAAGTTTAAGGGTCAAGATTATGATCGATATAACCAAGCCCCTTCCCAGAGGAATCTGGATTGAACCAGGGGAAAATGTAGATAGTTTATGGATTCAAGCCAAGTATGAGAGATTACCAGATTTCTGCTATGGATGTGGAAGAACCGGTCATGTCGTGAAGGACTGTCCCCATCTATCTGAAGGAGAAAAACAAGAAACTGAACCCTTTCAGTTTGGCAATTGGCTGCGATTTCAGGGAAGCAATTTGAAACGCAAAAAGAAAAATAGGTCGCCCAGTTTTGAGAAAGAAGAGTCCCCTGAAATTCCATGTCACCCAAATCCTCCCGTTTCTAACACAGTCGACTCCCCCTCTACTCACTCCAAAGAAGGTTTTAACATGCTGCACAATACTTGGCAATCCACTGATCAAGAAGAAGATCCTGCTGTTAATAATCATACGATTGACTTAAATCTTGGCCCCCAGGTTTGGGGAAGAAAGGAAGCTCCTTCGAAAAATTTATCTAATGGTAGTCCAAACGCAGACAAACATGTGTTCTCTGATCCAAAGGCTTCAATGGAGGAAGAAGGCACTATAGAGGATTTCACTCAACCGGTAGCAATGGAGACAAATCAGAAAAAAAGAAGAGGTTGGAAAAGAAGAGCAAGATCAGAAATCCTATATTCTCCTCAGAACAGTGAAGATCAGGTGTTATTAAAAAGAAAAGGAGTTTCTTTGGTAGAACTTGAAGAGGCAAAGAGAAAAAGAGAGTCGTCCCTACCAAATTACCCTATAGTTTCCCACTCAAAATCGGCGGAGTTTGCTCAGCAGCTCTGCCGGGAACCATGAAAATCCTCTGTTGGAATGCTCGGGGCGTGGGCAATCCTCGAGCATTCCGTGCTGTGTCTAACCTCATTCGGGTAAGACGTCCGCATGTTCTGTTCATATCTGAAACAAAATGTGGTGAAAACTGTACAAACAAGATAAAGAGAGTTGGGAATTTTTTTGGATGTCTATCGGTTAATAGTGTTGGCAGGAAAGGGGGGTTGTGTTTGTTGTGGACTGATCAGGTGAACTTGGAAGTATTATCGTACTCCCAAAACCATATCGATACAAAAATTGAGTGGGAAAACAAAGTTTTTAGATTCACAGGAATCTATGGCCACCCTGAGAGTAACAAGAAAATTCAAACATGGAATCTACAAAAGAATCTATGTGATGGAAGCGACTCCCCTTGGCTGGTACGGGGTGATCTAAATGAAATTCTCAGAATAGAGGAAAAGCATGGAGGATCTCAAAAAGATAACTATTTTCTTGAAAACTTCAGGGAGGCCCTAGATGATTGTAATTTAAAAGATACAGTTTTCGAAGGTCCTGATTTTACATGGTGCAATAGAAGGAGAGTCAATTGCACTTGGGAAAGGCTAGACCGTTTCCTTTGCAATCTGAATTTTGAATCACTATTTGAAAATTTCACAATTAAGCAGGATTGGCTCTCTTCGGATCATAGGCCTATCGAGTTCTCTTTAAGAAACTCATCTGCTGGAAAAAAGGGAAGGAAAAATCATTGAAAATTTGAAGAATCTTGGACCATCCACGATGAATGCAAAAAAATTATCAAGGAAGAAGGAATTTGGTATCCATCAGCCCAGTTCAAGATTCTATGCCTTAACCAAAATCTCAACCGGTGTGCTGTTGCCCTTAAACAATGGGGCAGGCCCATAACTAAAGGCTTAAAAAGCAGAATCATCAAATGCAAAAGAGCCTTACAAGATGCTTACAATTGCTTCCCTAATGTTGACTTTGACAAAAT TACTTCAGCCACGGTGCTGATTGTGTTTTGGTTTCTTTCTAAATCCTCAAAGAAGTAGATGATGCTTCTAAGTGGTGGATAGAACAGAAGAAGTTAGAGTTAGTTGTAGTCAAGATTCGCTATTAAGAGATTTCCAGGATGAACGCGGAGGACATTATCGAGAACTGGAAGAACCTTCGTTTATCAGATGAAGAAAAAGGAACTAAGAGTGAATTCGATCATCAGCTGGGATCCATGATTGAAGACCAATTGGATTTATGTCTAGTCGGCAAATTGCTGACCCCTCGTATAATAGCTCCAGGAATAATCAAGAATGTTTTTGCAAATGCCTGGAGAACAAAGGATGGGTTTCAGTGTTGAAGGTCTGGGTAGGAACATCTTTCTTTTTAAATTCGACTCAAGGAAGGACAAAGAGTTTGTAGTTCGTTTGGGACCTTGGCTCATGGATAATGCTTTATTGGCGCTAGAGGCTCCTAAAGCAAACATAAAAGTCTCACAGATGAAATTTGGAAAAGCTGCCTTCTGGGTCCGTTTCTTGGATATCCCTCTTGGTTTTCAAAACAAGTTTATGGCAAAACGGCTAGGAAATGCGATGGGAGAATTCTTGGAAGCTGAATGTAACCAGGATAATTTCTGTTGGGGAGAAAGTTTAAGGGTCAAGATTATGATCGATATAACCAAGCCCCTTCCCAGAGGAATCTGGATTGAACCAGGGGAAAATGTAGATAGTTTATGGATTCAAGCCAAGTATGAGAGATTACCAGATTTCTGCTATGGATGTGGAAGAACCGGTCATGTCGTGAAGGACTGTCCCCATCTATCTGAAGGAGAAAAACAAGAAACTGAACCCTTTCAGTTTGGCAATTGGCTGCGATTTCAGGGAAGCAATTTGAAACGCAAAAAGAAAAATAGGTCGCCCAGTTTTGAGAAAGAAGAGTCCCCTGAAATTCCATGTCACCCAAATCCTCCCGTTTCTAACACAGTCGACTCCCCCTCTACTCACTCCAAAGAAGGTTTTAACATGCTGCACAATACTTGGCAATCCACTGATCAAGAAGAAGATCCTGCTGTTAATAATCATACGATTGACTTAAATCTTGGCCCCCAGGTTTGGGGAAGAAAGGAAGCTCCTTCGAAAAATTTATCTAATGGTAGTCCAAACGCAGACAAACATGTGTTCTCTGATCCAAAGGCTTCAATGGAGGAAGAAGGCACTATAGAGGATTTCACTCAACCGGTAGCAATGGAGACAAATCAGAAAAAAAGAAGAGGTTGGAAAAGAAGAGCAAGATCAGAAATCCTATATTCTCCTCAGAACAGTGAAGATCAGGTGTTATTAAAAAGAAAAGGAGTTTCTTTGGTAGAACTTGAAGAGGCAAAGAGAAAAAGAGAGTCGTCCCTACCAAATTACCCTATAGTTTCCCACTCAAAATCGGCGGAGTTTGCTCAGCAGCTCTGCCGGGAACCATGAAAATCCTCTGTTGGAATGCTCGGGGCGTGGGCAATCCTCGAGCATTCCGTGCTGTGTCTAACCTCATTCGGGTAAGACGTCCGCATGTTCTGTTCATATCTGAAACAAAATGTGGTGAAAACTGTACAAACAAGATAAAGAGAGTTGGGAATTTTTTTGGATGTCTATCGGTTAATAGTGTTGGCAGGAAAGGGGGGTTGTGTTTGTTGTGGACTGATCAGGTGAACTTGGAAGTATTATCGTACTCCCAAAACCATATCGATACAAAAATTGAGTGGGAAAACAAAGTTTTTAGATTCACAGGAATCTATGGCCACCCTGAGAGTAACAAGAAAATTCAAACATGGAATCTACAAAAGAATCTATGTGATGGAAGCGACTCCCCTTGGCTGGTACGGGGTGATCTAAATGAAATTCTCAGAATAGAGGAAAAGCATGGAGGATCTCAAAAAGATAACTATTTTCTTGAAAACTTCAGGGAGGCCCTAGATGATTGTAATTTAAAAGATACAGTTTTCGAAGGTCCTGATTTTACATGGTGCAATAGAAGGAGAGTCAATTGCACTTGGGAAAGGCTAGACCGTTTCCTTTGCAATCTGAATTTTGAATCACTATTTGAAAATTTCACAATTAAGCAGGATTGGCTCTCTTCGGATCATAGGCCTATCGAGTTCTCTTTAAGAAACTCATCTGCTGGAAAAAAGGGAAGGAAAAATCATTGAAAATTTGAAGAATCTTGGACCATCCACGATGAATGCAAAAAAATTATCAAGGAAGAAGGAATTTGGTATCCATCAGCCCAGTTCAAGATTCTATGCCTTAACCAAAATCTCAACCGGTGTGCTGTTGCCCTTAAACAATGGGGCAGGCCCATAACTAAAGGCTTAAAAAGCAGAATCATCAAATGCAAAAGAGCCTTACAAGATGCTTACAATTGCTTCCCTAATGTTGACTTTGACAAAAT ATGTTTTTGCAAATGCCTGGAGAACAAAGGATGGGTTTCAGTGTTGAAGGTCTGGGTAGGAACATCTTTCTTTTTAAATTCGACTCAAGGAAGGACAAAGAGTTTGTAGTTCGTTTGGGACCTTGGCTCATGGATAATGCTTTATTGGCGCTAGAGGCTCCTAAAGCAAACATAAAAGTCTCACAGATGAAATTTGGAAAAGCTGCCTTCTGGGTCCGTTTCTTGGATATCCCTCTTGGTTTTCAAAACAAGTTTATGGCAAAACGGCTAGGAAATGCGATGGGAGAATTCTTGGAAGCTGAATGTAACCAGGATAATTTCTGTTGGGGAGAAAGTTTAAGGGTCAAGATTATGATCGATATAACCAAGCCCCTTCCCAGAGGAATCTGGATTGAACCAGGGGAAAATGTAGATAGTTTATGGATTCAAGCCAAGTATGAGAGATTACCAGATTTCTGCTATGGATGTGGAAGAACCGGTCATGTCGTGAAGGACTGTCCCCATCTATCTGAAGGAGAAAAACAAGAAACTGAACCCTTTCAGTTTGGCAATTGGCTGCGATTTCAGGGAAGCAATTTGAAACGCAAAAAGAAAAATAGGTCGCCCAGTTTTGAGAAAGAAGAGTCCCCTGAAATTCCATGTCACCCAAATCCTCCCGTTTCTAACACAGTCGACTCCCCCTCTACTCACTCCAAAGAAGGTTTTAACATGCTGCACAATACTTGGCAATCCACTGATCAAGAAGAAGATCCTGCTGTTAATAATCATACGATTGACTTAAATCTTGGCCCCCAGGTTTGGGGAAGAAAGGAAGCTCCTTCGAAAAATTTATCTAATGGTAGTCCAAACGCAGACAAACATGTGTTCTCTGATCCAAAGGCTTCAATGGAGGAAGAAGGCACTATAGAGGATTTCACTCAACCGGTAGCAATGGAGACAAATCAGAAAAAAAGAAGAGGTTGGAAAAGAAGAGCAAGATCAGAAATCCTATATTCTCCTCAGAACAGTGAAGATCAGGTGTTATTAAAAAGAAAAGGAGTTTCTTTGGTAGAACTTGAAGAGGCAAAGAGAAAAAGAGAGTCGTCCCTACCAAATTACCCTATAGTTTCCCACTCAAAATCGGCGGAGTTTGCTCAGCAGCTCTGCCGGGAACCATGA MFLQMPGEQRMGFSVEGLGRNIFLFKFDSRKDKEFVVRLGPWLMDNALLALEAPKANIKVSQMKFGKAAFWVRFLDIPLGFQNKFMAKRLGNAMGEFLEAECNQDNFCWGESLRVKIMIDITKPLPRGIWIEPGENVDSLWIQAKYERLPDFCYGCGRTGHVVKDCPHLSEGEKQETEPFQFGNWLRFQGSNLKRKKKNRSPSFEKEESPEIPCHPNPPVSNTVDSPSTHSKEGFNMLHNTWQSTDQEEDPAVNNHTIDLNLGPQVWGRKEAPSKNLSNGSPNADKHVFSDPKASMEEEGTIEDFTQPVAMETNQKKRRGWKRRARSEILYSPQNSEDQVLLKRKGVSLVELEEAKRKRESSLPNYPIVSHSKSAEFAQQLCREP Homology
BLAST of Clc09G07350 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 187.2 bits (474), Expect = 2.7e-43 Identity = 83/197 (42.13%), Postives = 120/197 (60.91%), Query Frame = 0
BLAST of Clc09G07350 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia]) HSP 1 Score: 177.6 bits (449), Expect = 2.1e-40 Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 0
BLAST of Clc09G07350 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 164.9 bits (416), Expect = 1.4e-36 Identity = 79/179 (44.13%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of Clc09G07350 vs. NCBI nr
Match: TXG60547.1 (hypothetical protein EZV62_015120 [Acer yangbiense]) HSP 1 Score: 158.3 bits (399), Expect = 1.3e-34 Identity = 73/190 (38.42%), Postives = 119/190 (62.63%), Query Frame = 0
BLAST of Clc09G07350 vs. NCBI nr
Match: TXG48504.1 (hypothetical protein EZV62_024379 [Acer yangbiense]) HSP 1 Score: 152.9 bits (385), Expect = 5.6e-33 Identity = 75/199 (37.69%), Postives = 117/199 (58.79%), Query Frame = 0
BLAST of Clc09G07350 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 1.3e-43 Identity = 83/197 (42.13%), Postives = 120/197 (60.91%), Query Frame = 0
BLAST of Clc09G07350 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.0e-40 Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 0
BLAST of Clc09G07350 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 6.9e-37 Identity = 79/179 (44.13%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of Clc09G07350 vs. ExPASy TrEMBL
Match: A0A5C7HTV0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015120 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 6.4e-35 Identity = 73/190 (38.42%), Postives = 119/190 (62.63%), Query Frame = 0
BLAST of Clc09G07350 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 2.7e-33 Identity = 75/199 (37.69%), Postives = 117/199 (58.79%), Query Frame = 0
BLAST of Clc09G07350 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-14 Identity = 46/153 (30.07%), Postives = 75/153 (49.02%), Query Frame = 0
BLAST of Clc09G07350 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 53.5 bits (127), Expect = 4.3e-07 Identity = 33/143 (23.08%), Postives = 56/143 (39.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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