Clc09G07330 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G07330
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pre-mRNA-splicing factor 18
Location	ClcChr09: 5898018 .. 5901519 (+)
RNA-Seq Expression	Clc09G07330
Synteny	Clc09G07330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTCTCAAGCAAGAACTTTTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGGGTCTTCAAGCGATCCGAAATCGAACAGAAACAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAACTGGAAGCTAAAGCTCTCCGCCAATCCACCACCTCCGCTGCCGCCGCTGAGACCACTTCCACATCTTCCAAATCAAATCCATTAGCCTCGGCCTCCACCACTTCCTCTTCCGTCGTAATCAACTCCACCGCCACCACTTCGAAATCCCTAACGGACGAGCAGAACATCGACAACCTCGTTCTTCCCAGACAGGAAGTGATCCGGAGACTTCGGTTTCTGAAACAGCCCATAACGTTGTTCGGGGAAGATGATGATGCTCGGCTCGACCGTCTGAAGTTTGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACCGAGGGGCAAACGAATGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCTGATGGGGGGTCGAGTGGGGTTGACGCTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTGAACGAATGGAACCAGGAGTTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCCATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGGTACAATTTTGTCCCTTTAGCTTTAGTTACATAGTCGATTTGTCGAATATTCCATTTTCTTGATAATTCTGCACTTTGAGCATGTAGATTGGAAGTAGTGTTAGTGGCTTAAAATATGAAAGGAAAGTTAGTCCCAAGGTCGGAGATGTGACTGAGAGAGAACTAAATGGAAGAGTTAAAAGTAGCGTAGAATTTACACCAAGCTAAAAGATTGTTTTCATCTCTAGCCATGATAATCAAAAGTAAGTTCTGGCAAACTGTATCCAAATAACTTTTTCTCTTTTTGAAACGATGACTATCAAGCATCCAAGGGAGTAGGTTGTTAATGATAAAGGGGTGAACCACTTGGCACTAGAAGTTTATGTGCATGTAATTTGGCAGTTCCTCAGCCGACTGGCACGTGAGGAAGAGGTGGCTTTTGGATTCAATATCTTCCATGTATGTATAGCACAACTTGGGTCGTGGGGAGAGGCATCAATTTGGAAGTCTTCTTTTATTAGTTTTGTAAGTCTTGGTGCTCTCATGAAAGAGCTCCTACAAGAAAAAGCTCAACTTCCTTTGGATATATTTCGAGGTACATTATCACCTTGTAAAGGTTGGTTATTTGGAATCATTTGTCCACTATATCCTTCAATAAGAAGTTGGAAGGGAAAGAACGTGTATTTGTCAGACTTCCATATTCATTTATTGGAAAGAACACTAAGTAGATGTTGAAGAGCAAGTATGGGAGAGAGACCCATTCTTTGTTTTCAGATCCAAAAAAAAAAAAAGAAAAAGAAAAAAAAGAAAGAAAAAAAAAATCTCTCAAACCAGGGTCCCAGTTTCAAGTAGAGAGGTTGTAGATGTCTTGGATAGAAGTAGTTTACCAATTGAAGATAGGGGATTTCCTTGGGAAAGCGTTTGAAAATGGATCATTACACCCCCATCCAAAATTCATTCCAAAAGCTTGTAGGAATGCCATTCAAGTCTTTTTAATCCTATTGGAGTTCAAATCAACACTTTGATCCTATTGGAGTTCAAATCTTTTTAATCGATAATAGGTAACCATTCAGCAATTATTGATATGAACATAGCTCAAATGGCATGAATTTATACTACCTATCAACCTTTGTATTATTTAGGGTTTTCCCCCTTTCTCTTTAGTGAATTGTTTCTTTTACCAAAAAAAAAAAAACCACCCCCAAAAAAATGGTAACCATTTGCAGTCGCCTTTGGAAATGTGCTAAGAAGTAGATACTGACAATAAACCATTACTCCATTTATCAAATCAGATTTTTTTACGATTGCAGTGTAGGACTATGCCCAGCTGTTTAGATAGTTGGTTGCTGGCTGTTTTGTTATTAGCAGGAGTGAATGCTTAACTTTTGGCCTGATATCTCTTCGGTTAGACCCTTGGCTCTAGCCACCTGTGTGTAAGTAACTGCCCCTTTCTAATTGCCATGGCTGAGGAATGTGCATTATGTTACTTACTCTCCTTTGTATTGCCACATGCAAGTGTCATTCTCGAACTTCCCTTTTTAAATCTACTATTATGTTACTTACTCTCCTTTGTTTTGTTTTTTACTTGTTCATAAGGAACCACTGACATTCAGTTGACAAATATTATGCATGTGACAAACATATACTTTAAATAGTTTTTTTTTTTTTTTTAATTTCTAATTATTTATCTGAGGCTAGTTTCTTCGTGATAAAAATTCTGGCATGAAACATACTTGTGTTGTATGGAATGAATTATTGTACTGCAGTGTTCTTAAGCTTCAATGATCTTTTATGTTTAGTGCTCTTTGTGGCCTTCACGACAATATCCTTAGATATAACTTGACATTTGTGAGAGCTGAGAAACAAGAGAACCGTGATCTGGGTTTGCTGAAATCAATTGAGTATCTTGTAAGATTTTCTCTTTAGCAGATAATGTTCATTAACGTTTAATTAAAATTTTCTTTTAGGTTCTTCCCGACGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCTATTGGAAATGCCCCCTGGCCTATTGGTGTTACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTAATGACGTTCTGTCAACGGCGCTATCCAACAATGCCATCCAAGGCAGTGGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAGTCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAGCAAGTTAGAATATCCTCTCCTGGCTTAATGATATGTAATCTAAAGCTCTTCAGCGTAGTTTGGTAGTCGTCGAGTCAATTTCTGATTACTGTTTGAGATTGAAGTCTGCCAACGTCAAAATACTTGCTAACAATGTTTTGTCAACTGCTTTATCAGGCCATAGAATTTAACAGCTTTGCGAACAGTAATGACCTGCAGTCCATGCTATCTGAAGAGAATCTGGAGTAGTCAATCAAGGTGTTCCGACAAAGTGCATCCAAATCACGCCCGCCCCCGAAGATAATTAGCTG

mRNA sequence

ATGGATCTTCTCAAGCAAGAACTTTTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGGGTCTTCAAGCGATCCGAAATCGAACAGAAACAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAACTGGAAGCTAAAGCTCTCCGCCAATCCACCACCTCCGCTGCCGCCGCTGAGACCACTTCCACATCTTCCAAATCAAATCCATTAGCCTCGGCCTCCACCACTTCCTCTTCCGTCGTAATCAACTCCACCGCCACCACTTCGAAATCCCTAACGGACGAGCAGAACATCGACAACCTCGTTCTTCCCAGACAGGAAGTGATCCGGAGACTTCGGTTTCTGAAACAGCCCATAACGTTGTTCGGGGAAGATGATGATGCTCGGCTCGACCGTCTGAAGTTTGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACCGAGGGGCAAACGAATGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCTGATGGGGGGTCGAGTGGGGTTGACGCTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTGAACGAATGGAACCAGGAGTTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCCATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGTTCCTCAGCCGACTGGCACGTGAGGAAGAGGTGGCTTTTGGATTCAATATCTTCCATGTATGTATAGCACAACTTGGGTCGTGGGGAGAGGCATCAATTTGGAAGTCTTCTTTTATTAGTTTTACCCTTGGCTCTAGCCACCTGTGTGTTCTTCCCGACGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCTATTGGAAATGCCCCCTGGCCTATTGGTGTTACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTAATGACGTTCTGTCAACGGCGCTATCCAACAATGCCATCCAAGGCAGTGGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAGTCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAGCAAGCCATAGAATTTAACAGCTTTGCGAACAGTAATGACCTGCAGTCCATGCTATCTGAAGAGAATCTGGAGTAGTCAATCAAGGTGTTCCGACAAAGTGCATCCAAATCACGCCCGCCCCCGAAGATAATTAGCTG

Coding sequence (CDS)

ATGGATCTTCTCAAGCAAGAACTTTTAAAGAAACGTCAAGCCCTAGCCACCGAAACCGGCGGCAAGCGGGTCTTCAAGCGATCCGAAATCGAACAGAAACAAATCCAACAGCTACGCGAGAAAGAGAAGCGCGAACTGGAAGCTAAAGCTCTCCGCCAATCCACCACCTCCGCTGCCGCCGCTGAGACCACTTCCACATCTTCCAAATCAAATCCATTAGCCTCGGCCTCCACCACTTCCTCTTCCGTCGTAATCAACTCCACCGCCACCACTTCGAAATCCCTAACGGACGAGCAGAACATCGACAACCTCGTTCTTCCCAGACAGGAAGTGATCCGGAGACTTCGGTTTCTGAAACAGCCCATAACGTTGTTCGGGGAAGATGATGATGCTCGGCTCGACCGTCTGAAGTTTGTGCTGAAAGCGGGGCTTTTCGAGGTGGATAGTGATTTGACCGAGGGGCAAACGAATGATTTTCTTCGGGATATTGCAGAGTTGAGGAAGCGGCAGAAGACGGGGATTTTGAGTGAGAGGAAGAGGCAGAAGAAGGAGGATGGTGCTGGGGAAGAGGGAGATGGAGGTGGGGCTGATGAAGAAAGTGCTGATGGGGGGTCGAGTGGGGTTGACGCTGACAAAGATTTAAAGAGAATGAAAGCTAATTTTGATGAGTTATGTGAGGAAGATAAGATATTGGTGTTTTTTAAGAGGTTGTTGAACGAATGGAACCAGGAGTTGGATGAAATGCCTGAAGCAGAGAAGCGGACGGCCAAAGGGAAGTCCATGGTAGCAACATTCAAGCAGTGTGCTCGTTATTTACATCCTCTGTTCAAGTTTTGCAGGAAGAAGTTCCTCAGCCGACTGGCACGTGAGGAAGAGGTGGCTTTTGGATTCAATATCTTCCATGTATGTATAGCACAACTTGGGTCGTGGGGAGAGGCATCAATTTGGAAGTCTTCTTTTATTAGTTTTACCCTTGGCTCTAGCCACCTGTGTGTTCTTCCCGACGATATTCGGCAAGCATTGTTGGTAGTTGTTGAATGCTGCATGAAGCGAGACTATCTAGCTGCCATGGATCAATACATTAAGATGGCTATTGGAAATGCCCCCTGGCCTATTGGTGTTACTATGGTTGGTATTCACGAACGTTCAGCTCGTGAGAAGATTTACACCAACAGTGTGGCTCATATCATGAATGATGAAACAACAAGGAAATACTTGCAATCAATCAAGAGATTAATGACGTTCTGTCAACGGCGCTATCCAACAATGCCATCCAAGGCAGTGGAATTTAACAGCTTGGCAAACGGTAGTGACCTGCAGTCTCTGCTAGCAGAAGAGAGAGTTTCTGGAGGAGGAGGCAAGCTGGGTTCTGATGAAAGGCTACGAATCATGCCTGCCCCAGAAGATAGCTAG

Protein sequence

MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS

Homology

[Close]

BLAST of Clc09G07330 vs. NCBI nr
Match: XP_038897671.1 (pre-mRNA-splicing factor 18 [Benincasa hispida] >XP_038897672.1 pre-mRNA-splicing factor 18 [Benincasa hispida])

HSP 1 Score: 740.7 bits (1911), Expect = 7.6e-210
Identity = 413/470 (87.87%), Postives = 415/470 (88.30%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE TSTSSKSNPLASASTTSSSV INSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSTSSKSNPLASASTTSSSVAINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PIT+FGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITIFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGVDADKDL RMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLNRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGK GSDERLRIMPA +DS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKPGSDERLRIMPASDDS 420

[Close]

BLAST of Clc09G07330 vs. NCBI nr
Match: KAA0064068.1 (pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa] >TYK26227.1 pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa])

HSP 1 Score: 738.4 bits (1905), Expect = 3.8e-209
Identity = 411/470 (87.45%), Postives = 413/470 (87.87%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQST SA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV I+ST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. NCBI nr
Match: XP_004146980.1 (pre-mRNA-splicing factor 18 [Cucumis sativus] >KGN44809.1 hypothetical protein Csa_015983 [Cucumis sativus])

HSP 1 Score: 736.9 bits (1901), Expect = 1.1e-208
Identity = 410/470 (87.23%), Postives = 412/470 (87.66%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQSTTSA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV  NST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. NCBI nr
Match: XP_008451349.1 (PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo])

HSP 1 Score: 736.5 bits (1900), Expect = 1.4e-208
Identity = 410/470 (87.23%), Postives = 412/470 (87.66%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQST SA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV I+ST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGG DEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. NCBI nr
Match: XP_023549183.1 (pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549184.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549185.1 pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 730.7 bits (1885), Expect = 7.9e-207
Identity = 407/470 (86.60%), Postives = 412/470 (87.66%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQS+T++  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTTSPN 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE TS SSKSN LASASTTSSS  INSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASTTSSSAAINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSGVDADKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGVDADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGK GSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot
Match: Q8BM39 (Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.9e-38
Identity = 136/436 (31.19%), Postives = 206/436 (47.25%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +K+ +   E+   +++ K        
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELARKEEEAYYERCGYKIQPK-------- 60

Query: 61  AAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
                         PL     TSS+ V+       K          + L RQEVIRRLR 
Sbjct: 61  ---------EDDQKPL-----TSSNPVLELELAEEKL--------PMTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ ++  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGF 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+               
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR--------------- 300

Query: 301 NIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAM 360
                                              LP DI++++  +++  ++R+Y+ A 
Sbjct: 301 ----------------------------------NLPADIKESITDIIKFMLQREYVKAN 342

Query: 361 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQ 420
           D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ
Sbjct: 361 DAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQ 342

Query: 421 RRYPTMPSKAVEFNSL 434
           + +PT PSK VE+N+L
Sbjct: 421 KHFPTDPSKCVEYNAL 342

[Close]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot
Match: Q2HJ41 (Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.6e-38
Identity = 135/436 (30.96%), Postives = 206/436 (47.25%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +K+ +   E+   +++ K        
Sbjct: 1   MDVLKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPK-------- 60

Query: 61  AAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
                         PL     TSS+ V+       K          + L RQEVIRRLR 
Sbjct: 61  ---------DEDQKPL-----TSSNPVLELELAEEKL--------PMTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    ++  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNELV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ ++  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGF 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+               
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR--------------- 300

Query: 301 NIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAM 360
                                              LP DI++++  +++  ++R+Y+ A 
Sbjct: 301 ----------------------------------NLPADIKESITDIIKFMLQREYVKAN 342

Query: 361 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQ 420
           D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ
Sbjct: 361 DAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQ 342

Query: 421 RRYPTMPSKAVEFNSL 434
           + +PT PSK VE+N+L
Sbjct: 421 KHFPTDPSKCVEYNAL 342

[Close]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot
Match: Q9JKB8 (Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.6e-38
Identity = 135/436 (30.96%), Postives = 206/436 (47.25%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +K+ +   E+   +++ K        
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKVQPK-------- 60

Query: 61  AAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
                         PL     TSS+ V+       K          + L RQEVIRRLR 
Sbjct: 61  ---------EDDQKPL-----TSSNPVLELELAEEKL--------PMTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +P+ LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPMRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ ++  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGF 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+               
Sbjct: 241 LGVWAKELNSREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR--------------- 300

Query: 301 NIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAM 360
                                              LP DI++++  +++  ++R+Y+ A 
Sbjct: 301 ----------------------------------NLPADIKESITDIIKFMLQREYVKAN 342

Query: 361 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQ 420
           D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ
Sbjct: 361 DAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQ 342

Query: 421 RRYPTMPSKAVEFNSL 434
           + +PT PSK VE+N+L
Sbjct: 421 KHFPTDPSKCVEYNAL 342

[Close]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot
Match: Q99633 (Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37
Identity = 133/436 (30.50%), Postives = 204/436 (46.79%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +K+ +   E+   +++ K        
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPK-------- 60

Query: 61  AAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
               E     + SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  ---EEDQKPLTSSNPVLELELAEEKL-------------------PMTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ ++  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGF 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+               
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR--------------- 300

Query: 301 NIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAM 360
                                              LP DI++++  +++  ++R+Y+ A 
Sbjct: 301 ----------------------------------NLPADIKESITDIIKFMLQREYVKAN 342

Query: 361 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQ 420
           D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ
Sbjct: 361 DAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQ 342

Query: 421 RRYPTMPSKAVEFNSL 434
           + +PT PSK VE+N+L
Sbjct: 421 KHFPTDPSKCVEYNAL 342

[Close]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot
Match: Q5RE03 (Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.6e-37
Identity = 133/436 (30.50%), Postives = 203/436 (46.56%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATE---TGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTS 60
           MD+LK E+L+KRQ +         K+ FKRSE+ +K+ +   E+    ++ K        
Sbjct: 1   MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYRIQPK-------- 60

Query: 61  AAAAETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
               E     + SNP+         +                    + L RQEVIRRLR 
Sbjct: 61  ---EEDQKPLTSSNPVLELELAEEKL-------------------PMTLSRQEVIRRLRE 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
             +PI LFGE D     RL+      +  +  ++ +G  ND    + ++ ++    I+  
Sbjct: 121 RGEPIRLFGETDYDAFQRLR-----KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIV-- 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRL 240
                   G  E G+    ++      ++ ++  + L       D+  + D I  F K L
Sbjct: 181 --------GGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFLKFL 240

Query: 241 LNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGF 300
           L  W +EL+   +  KR+ +GK   AT KQ   YL PLF+  RK+               
Sbjct: 241 LGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR--------------- 300

Query: 301 NIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAM 360
                                              LP DI++++  +++  ++R+Y+ A 
Sbjct: 301 ----------------------------------NLPADIKESITDIIKFMLQREYVKAN 342

Query: 361 DQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQ 420
           D Y++MAIGNAPWPIGVTMVGIH R+ REKI++  VAH++NDET RKY+Q +KRLMT CQ
Sbjct: 361 DAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSKHVAHVLNDETQRKYIQGLKRLMTICQ 342

Query: 421 RRYPTMPSKAVEFNSL 434
           + +PT PSK VE+N+L
Sbjct: 421 KHFPTDPSKCVEYNAL 342

[Close]

BLAST of Clc09G07330 vs. ExPASy TrEMBL
Match: A0A5D3DRE9 (Pre-mRNA-splicing factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001610 PE=3 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.8e-209
Identity = 411/470 (87.45%), Postives = 413/470 (87.87%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQST SA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV I+ST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. ExPASy TrEMBL
Match: A0A0A0K7C9 (Pre-mRNA-splicing factor 18 OS=Cucumis sativus OX=3659 GN=Csa_7G388420 PE=3 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 5.3e-209
Identity = 410/470 (87.23%), Postives = 412/470 (87.66%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQ+QIQQLREKEKRELEAKALRQSTTSA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQRQIQQLREKEKRELEAKALRQSTTSATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV  NST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAVSTSSKSNPLASASTTSSSVATNSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           W QELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WKQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. ExPASy TrEMBL
Match: A0A1S3BS26 (Pre-mRNA-splicing factor 18 OS=Cucumis melo OX=3656 GN=LOC103492665 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 7.0e-209
Identity = 410/470 (87.23%), Postives = 412/470 (87.66%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQST SA A
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTASATA 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE  STSSKSNPLASASTTSSSV I+ST TTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEAASTSSKSNPLASASTTSSSVAISSTTTTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGG DEESADGGSSGV+ DKDLKRMKANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGPDEESADGGSSGVETDKDLKRMKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGKLGSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKLGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. ExPASy TrEMBL
Match: A0A6J1GQ96 (Pre-mRNA-splicing factor 18 OS=Cucurbita moschata OX=3662 GN=LOC111456490 PE=3 SV=1)

HSP 1 Score: 728.8 bits (1880), Expect = 1.5e-206
Identity = 407/470 (86.60%), Postives = 411/470 (87.45%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQS+TS+  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTSSPN 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE TS SSKSN LASASTTSSS  INSTATTSKSLTDEQNIDNLVL RQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASTTSSSAAINSTATTSKSLTDEQNIDNLVLTRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSGVDADKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGVDADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGK GSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. ExPASy TrEMBL
Match: A0A6J1JZG6 (Pre-mRNA-splicing factor 18 OS=Cucurbita maxima OX=3661 GN=LOC111488824 PE=3 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 4.2e-206
Identity = 405/470 (86.17%), Postives = 410/470 (87.23%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQS+TS+  
Sbjct: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSSTSSPN 60

Query: 61  AETTSTSSKSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRFLKQ 120
           AE TS SSKSN LASAS TSSS  INSTATTSKS+TDEQNIDNLVLPRQEVIRRLRFLKQ
Sbjct: 61  AEATSASSKSNSLASASATSSSAAINSTATTSKSVTDEQNIDNLVLPRQEVIRRLRFLKQ 120

Query: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180
           PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR
Sbjct: 121 PITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSERKR 180

Query: 181 QKKEDGAGEEGDGGGADEESADGGSSGVDADKDLKRMKANFDELCEEDKILVFFKRLLNE 240
           QKKEDGAGEEGDGGGADE+SADGGSSG DADKDLKR+KANFDELCEEDKILVFFKRLLNE
Sbjct: 181 QKKEDGAGEEGDGGGADEDSADGGSSGADADKDLKRIKANFDELCEEDKILVFFKRLLNE 240

Query: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIF 300
           WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK                  
Sbjct: 241 WNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKK------------------ 300

Query: 301 HVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQY 360
                                          VLPDDIRQALLVVVECCMKRDYLAAMDQY
Sbjct: 301 -------------------------------VLPDDIRQALLVVVECCMKRDYLAAMDQY 360

Query: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420
           IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY
Sbjct: 361 IKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFCQRRY 420

Query: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           PTMPSKAVEFNSLANGSDLQSLLAEERVS GGGK GSDERLRIMPAPEDS
Sbjct: 421 PTMPSKAVEFNSLANGSDLQSLLAEERVS-GGGKQGSDERLRIMPAPEDS 420

[Close]

BLAST of Clc09G07330 vs. TAIR 10
Match: AT1G03140.1 (splicing factor Prp18 family protein )

HSP 1 Score: 520.4 bits (1339), Expect = 1.5e-147
Identity = 300/474 (63.29%), Postives = 355/474 (74.89%), Query Frame = 0


Query: 1   MDLLKQELLKKRQALATETGGKRVFKRSEIEQKQIQQLREKEKRELEAKALRQSTTSAAA 60
           MDLL++E+LKKR++LA E+GGK+ FKRSEIEQK+IQ+LRE+E+RE E KA R++  +A+ 
Sbjct: 1   MDLLREEILKKRKSLAEESGGKKFFKRSEIEQKKIQKLREEERREHELKAQRRAAAAASG 60

Query: 61  AETTSTSS---KSNPLASASTTSSSVVINSTATTSKSLTDEQNIDNLVLPRQEVIRRLRF 120
            +  S+ S    SN   SAS+ SS+    + A  SK+LTDE    NL+LPRQEVIRRLRF
Sbjct: 61  GDGKSSGSAPGSSNAATSASSKSSASDAAAIA-DSKALTDE----NLILPRQEVIRRLRF 120

Query: 121 LKQPITLFGEDDDARLDRLKFVLKAGLFEVDSDLTEGQTNDFLRDIAELRKRQKTGILSE 180
           LKQP+TLFGEDD +RLDRLK+VLK GLFEVDSD+TEGQTNDFLRDIAEL+KRQK+G++ +
Sbjct: 121 LKQPMTLFGEDDQSRLDRLKYVLKEGLFEVDSDMTEGQTNDFLRDIAELKKRQKSGMMGD 180

Query: 181 RKRQKKEDGAGEEGDGGGADEESADGG-SSGVDADKDLKRMKANFDELCEEDKILVFFKR 240
           RKR+ +++   +EGD G   E+   GG SS VDADKD+KR+KANF++LC+EDKILVF+K+
Sbjct: 181 RKRKSRDERGRDEGDRGETREDELSGGESSDVDADKDMKRLKANFEDLCDEDKILVFYKK 240

Query: 241 LLNEWNQELDEMPEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFG 300
           LL EW QELD M   E+RTAKGK MVATFKQCARYL PLF  CRKK              
Sbjct: 241 LLIEWKQELDAMENTERRTAKGKQMVATFKQCARYLVPLFNLCRKK-------------- 300

Query: 301 FNIFHVCIAQLGSWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAA 360
                                               LP DIRQAL+V+V  C+KRDYLAA
Sbjct: 301 -----------------------------------GLPADIRQALMVMVNHCIKRDYLAA 360

Query: 361 MDQYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSIKRLMTFC 420
           MD YIK+AIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQS+KRLMTFC
Sbjct: 361 MDHYIKLAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFC 420

Query: 421 QRRYPTMPSKAVEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPAPEDS 471
           QRRYPTMPSKAVEFNSLANGSDLQSLLAEER  GG  +  S+ERLR+MP+  +S
Sbjct: 421 QRRYPTMPSKAVEFNSLANGSDLQSLLAEERFFGGNREQVSEERLRLMPSQSES 420

[Close]

BLAST of Clc09G07330 vs. TAIR 10
Match: AT1G54590.1 (INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro DOMAIN/s: Prp18 (InterPro:IPR004098); BEST Arabidopsis thaliana protein match is: splicing factor Prp18 family protein (TAIR:AT1G03140.1); Has 388 Blast hits to 388 proteins in 196 species: Archae - 0; Bacteria - 0; Metazoa - 136; Fungi - 132; Plants - 48; Viruses - 0; Other Eukaryotes - 72 (source: NCBI BLink). )

HSP 1 Score: 307.8 bits (787), Expect = 1.5e-83
Identity = 182/339 (53.69%), Postives = 224/339 (66.08%), Query Frame = 0


Query: 132 RLDRLKFVLKAGLF-EVDSDLTEGQTNDFLRDIAELRKRQK-TGILSERKRQKKEDGAGE 191
           RLDRLK+VLK GLF EVD+D+T+G+TNDFLRDI EL+KR++ +G++++RKR+   D    
Sbjct: 86  RLDRLKYVLKEGLFEEVDNDMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSND---- 145

Query: 192 EGDGGGADEESADGGSSGVDADKDLKRM-KANFDELCEEDKILVFFKRLLNEWNQELDEM 251
             +  GA++E             DLK + +ANF++LC+EDKILVF K+LL EW QEL+ M
Sbjct: 146 -DELIGAEKE-------------DLKLLEEANFEDLCDEDKILVFCKKLLLEWKQELEAM 205

Query: 252 PEAEKRTAKGKSMVATFKQCARYLHPLFKFCRKKFLSRLAREEEVAFGFNIFHVCIAQLG 311
              E+RTA GK M+ATF QCARYL PLF  CR K                          
Sbjct: 206 ENTERRTAIGKQMLATFNQCARYLTPLFHLCRNK-------------------------- 265

Query: 312 SWGEASIWKSSFISFTLGSSHLCVLPDDIRQALLVVVECCMKRDYLAAMDQYIKMAIGNA 371
                                   LP DIRQ L+V+V C +KRDYL A  Q+IK+AIGNA
Sbjct: 266 -----------------------CLPADIRQGLMVMVNCWIKRDYLDATAQFIKLAIGNA 325

Query: 372 PWPIGVTMVGIHERSAREKIYT-NSVAHIMNDETTRKYLQSIKRLMTFCQRRYPTMPSKA 431
           PWPIGVTMVGIHERSAREKI T +SVAHIMN+ETTRKYLQS+KRLMTFCQRRY  +PSK+
Sbjct: 326 PWPIGVTMVGIHERSAREKISTSSSVAHIMNNETTRKYLQSVKRLMTFCQRRYSALPSKS 357

Query: 432 VEFNSLANGSDLQSLLAEERVSGGGGKLGSDERLRIMPA 467
           +EFNSLANGS+L SLLAEER      +  S+ERL +MP+
Sbjct: 386 IEFNSLANGSNLHSLLAEERFFAADRERVSEERLWLMPS 357

The following BLAST results are available for this feature:

BLAST of Clc09G07330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897671.1	7.6e-210	87.87	pre-mRNA-splicing factor 18 [Benincasa hispida] >XP_038897672.1 pre-mRNA-splicin...	[more]
KAA0064068.1	3.8e-209	87.45	pre-mRNA-splicing factor 18 [Cucumis melo var. makuwa] >TYK26227.1 pre-mRNA-spli...	[more]
XP_004146980.1	1.1e-208	87.23	pre-mRNA-splicing factor 18 [Cucumis sativus] >KGN44809.1 hypothetical protein C...	[more]
XP_008451349.1	1.4e-208	87.23	PREDICTED: pre-mRNA-splicing factor 18 [Cucumis melo]	[more]
XP_023549183.1	7.9e-207	86.60	pre-mRNA-splicing factor 18-like [Cucurbita pepo subsp. pepo] >XP_023549184.1 pr...	[more]

BLAST of Clc09G07330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BM39	1.9e-38	31.19	Pre-mRNA-splicing factor 18 OS=Mus musculus OX=10090 GN=Prpf18 PE=1 SV=1	[more]
Q2HJ41	5.6e-38	30.96	Pre-mRNA-splicing factor 18 OS=Bos taurus OX=9913 GN=PRPF18 PE=2 SV=1	[more]
Q9JKB8	5.6e-38	30.96	Pre-mRNA-splicing factor 18 OS=Rattus norvegicus OX=10116 GN=Prpf18 PE=2 SV=1	[more]
Q99633	1.2e-37	30.50	Pre-mRNA-splicing factor 18 OS=Homo sapiens OX=9606 GN=PRPF18 PE=1 SV=1	[more]
Q5RE03	1.6e-37	30.50	Pre-mRNA-splicing factor 18 OS=Pongo abelii OX=9601 GN=PRPF18 PE=2 SV=1	[more]

BLAST of Clc09G07330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DRE9	1.8e-209	87.45	Pre-mRNA-splicing factor 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A0A0K7C9	5.3e-209	87.23	Pre-mRNA-splicing factor 18 OS=Cucumis sativus OX=3659 GN=Csa_7G388420 PE=3 SV=1	[more]
A0A1S3BS26	7.0e-209	87.23	Pre-mRNA-splicing factor 18 OS=Cucumis melo OX=3656 GN=LOC103492665 PE=3 SV=1	[more]
A0A6J1GQ96	1.5e-206	86.60	Pre-mRNA-splicing factor 18 OS=Cucurbita moschata OX=3662 GN=LOC111456490 PE=3 S...	[more]
A0A6J1JZG6	4.2e-206	86.17	Pre-mRNA-splicing factor 18 OS=Cucurbita maxima OX=3661 GN=LOC111488824 PE=3 SV=...	[more]

BLAST of Clc09G07330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03140.1	1.5e-147	63.29	splicing factor Prp18 family protein	[more]
AT1G54590.1	1.5e-83	53.69	INVOLVED IN: RNA splicing; LOCATED IN: spliceosomal complex; CONTAINS InterPro D...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 106..157 e-value: 1.8E-21 score: 87.3
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 111..137 e-value: 1.4E-11 score: 43.7
IPR004098	Prp18	PFAM	PF02840	Prp18	coord: 333..422 e-value: 1.9E-45 score: 154.5 coord: 232..285 e-value: 2.7E-9 score: 37.3
None	No IPR available	GENE3D	1.20.940.10	Functional domain of the splicing factor Prp18	coord: 204..424 e-value: 9.1E-54 score: 183.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..470
None	No IPR available	PANTHER	PTHR13007:SF22	BNAA09G50970D PROTEIN	coord: 1..270 coord: 332..466
None	No IPR available	SUPERFAMILY	47938	Functional domain of the splicing factor Prp18	coord: 207..286
None	No IPR available	SUPERFAMILY	47938	Functional domain of the splicing factor Prp18	coord: 333..422
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 75..154 e-value: 1.3E-15 score: 58.7
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 100..141
IPR039979	Pre-mRNA-splicing factor 18	PANTHER	PTHR13007	PRE-MRNA SPLICING FACTOR-RELATED	coord: 1..270
IPR039979	Pre-mRNA-splicing factor 18	PANTHER	PTHR13007	PRE-MRNA SPLICING FACTOR-RELATED	coord: 332..466

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G07330.2	Clc09G07330.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000350	generation of catalytic spliceosome for second transesterification step
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0071021	U2-type post-spliceosomal complex
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
cellular_component	GO:0005682	U5 snRNP
cellular_component	GO:0005681	spliceosomal complex