Clc09G06990 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G06990
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	auxin-binding protein T85
Location	ClcChr09: 5548618 .. 5558049 (+)
RNA-Seq Expression	Clc09G06990
Synteny	Clc09G06990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCATTTCTTATCCAAAACAAAGCAATGAACACTCTAATTCCCACTTCTCCTTGCAATTTCTGCGATATCCCAAGCTTCTTTTCCCACAGAACCGCCATTTCCCTAAAGCTTTCCGCCACAAAAACCAACCACAGATTACGCGCCAATTCCAACGACCTACAAACCCAGGCAGTTGAGGAACCGAAAGAAGAAGAAAATGGGATAGCAGCCGAACCCCAGCAGCAAACCAAGGCGTCCTCTTCTCCTGCACTCGAAAAAGACCTCAAGAAGGTTTGTTATCTATGCTGAATTTGGTGTATCTCATGATCTTTTATTGTTTTTTCGGATCTTGATCGCTATAATTTAATGGGTATTTGTTATTTTACTTGATTAGTTTACATATTCTTTTGTGGTCATTTCAGTGATTTTAACTTTCAATATTTACTTCCAGAACTGTCTAATGGGGTTTTAGAATTTTTTTTCAGTTCCATCTGGTAGATTATTGGGATTTTTTTAGGCATTGGGAGTTGTCATTATGGTTAAAGATACCATATTAGAAAGATGAAGAGATATCATAATCTTTATAAAATAGATGAGTTACTTCCTCCTTCCGAATTAGTTGTGAGATGTAAGTGTAACCTCTCTTATCTAATATAGTATAAGAGATCATGGACTTCGATGGGTATTCGGTCGAGAAACAAAAATGATTAGACTCCAAGAATGGTGAATCCAACAAGAATGGTCGAAAACAAAAGCTTCAGCATGGTTTAAGATATATTTAATCTCTCCTTTCACTTATGCATTTGGAAATTGACTTGAGATCCAACAAGTGGACTACTATACGTAAAATGGGAAGGAAATGACAACCATGTATACGAATTCAAGATCTTTCTACTTTGATTCCATGTTAAGTCACCACTACACTCAAAGGCTTGAGCTATTAAGTTGGTTATAATTAATCTTTTATATATATTCTTAAAGCTTCCCTCTACTTGTGGGCTTAGAAATTAGCAATAGACTAAATAAGTAAATAAACACATAAAACAGGGAGGAAATGACACTTTGGAGGCGAATTCGTGATTTCCTACTTTGATAATATGTTAAAAATCACCACTAGACTCAAAAGCTTAAGTGAATAGGTTAGGATACCTTAACAACAATCACTGTGTAAACATCTTCTACTTTAACATAGTCACATTCTCTCCTAGTCTACCTCCTCTTCTTCAAAGGGGACTATTTCATCCAATTCCAGAGCATTCCTACTACTATCTACAATCTCTTCTTCATGACCATCAGAAGACCTCTCATCATCATTGGATTACCTAACCAATCACAACCCGGGATCTTCCTCAATTATCAACAATAGCTATGTGCCTCCTTCTACTACTTTGAAAACTATTTTCCGACCCAATACTAAACAATCCAACCGTCTATGAACAAAGAAAAAAAAGGGGCGGAGAGAGCTTCAAAACCTTGAAAGCTCTATATCATATGACAAAGAAAGCTAAAGATTTGATTGGAGAAGAGCAATCTTCAACTTGAGTCTGCTATTGACTTCCACCTTGTTTATTTTTTGAATCTGGTTGTTTGGGACCTGATTTTTGGGATTTCTATTGTCTGTTGTGTTTCATCAGGTGCTTCCTTTAGCTTTGTTTTAGTGCCTCTGTATTTTTTGTTTTTTTTTCTCCAATTTGGTTGTACAACTTTCGTTCATCTCATTTGCTTCTTATCTTTATCGGTTGTATTTTTACCTGTCGTTCGGGCATCTTTTGTTATTTGGTGTACTCAAGAAAGTTCTCCAACGTTCTAATCTTTGCCTATCTGGAACTTGGAATCCTTAAATTTCTTTTCGTTCCATTTCTCAAACATCTCTACCTAAACTCCTAGGTGGTTTGATAATTTTACTGTCCATCCCTTGAAGTGGATGCTAATCCCCTCATCCCCCCCTCCTCCTCCAGATTTCAAATCAAAGACTAAATATAGCTACAGGAAGACAGGTAGGAGCGAAGAAATTAAATTGGTAGAGAATGGAAGAAGGAAACTAATAGATTCTGGTGTTACAAAGTCATTTAGCTTCAAGATTGAAGCAACAAATATGATGTGATGTGATTTTGGTTATGAGAATCAGCCTAGTGGCATTAAAAATGTGAAAAAAGCAAAGAGACTTTAGGGGAAAGGTTCATCCTCACGGTAGCCTGTATCTAGGATATTAAACTGCAACTTGTTTTATAGGAACTAAATATTGCAAGTTCAAGCATTAGTTGAAGTACGATTTTTATATTGAGAGCGAATCTCCTTCCTATATGCGCTTATAGTTCTATTTGTTAAACTTATGTTTCTAAGTAAAAACAGGAGGAAGTTTATTTTAGTTTGGAGAGAAAGTTTAAGTATAGTTGAGAACTAAGCACTTCGCACTTTCAATGACTTCATAACAGGTTGTTCAAAAGACTGCTGCAACATTTGCACCAAGGGCCTCTACTGCTTCAAAAAATCCTGCTGTACCTGGAACTACTTTATATACTGTCTTTGAGGTTCAAGGCTATGCCTCAATGATGTTAGGCGGTGTACTATCTTTCAATCTTTTATTCCCCTCAAATGAACCTGATATATGGAGATTAATGGGAATGTGGTCAATATGGATGTTCAGTAAGTTTTTCTCCTACTTTTTTTAAAAAAAATCTTTTCCCCCCCTTTTTGGTTGCTAGAATGAAGTCTCATCCACCATTAGCAAAGCTCTTTTTCTTATTAGGTTAAACTACCACTGTGATTCTTATACTAAAGTTTGTTCAATTTTAGTCCTTGTAATTTTAATGAATCTTAAATTTGGTCCCTTATGCTAATTTATAGTTGATTTTCTCAAAAACCTTTTTATTATTTATTAGCATTTTTACTATAAATTTTGAAAACATATTCACATCTTGTATTTCCTTGCGTGACAAAGAAAATTTCGAAGTAGCTTTGATTGATGACATAAAAAATTCAAATGGCAGCAATACCTTCGCTTCGAGCACGTGACTGCTCGAAAAATGAGAAAGAAGCTCTCAACTACCTGTTTCTCCTCATTCCATTACTCAACGTTATAATTCCATTTTTCTTGAAGTCTTTTGCAGTCGTCTGGTCAGCTGATACCATAGCCTTTTTTGGAATGTATGCTTGGAAGGTATGATTGTCTCTTCACATATGATTTACCTAATGGAAATATAGACTCCTCTGGTCATGTTTCAATTTCTCGTTTCCTGTTTTTCAGTAAAGAAAAAGAAATAAAAAGAGAATGGCATTTGGTAATTGTTTCTTGGTTCTTTTTTTCTTTTCCAAGAAACATATTTGATAACTATTTCTTGTTTCTTATTATAATGCATGTTAAATTAAAAACTCAGAATGTTTATAGGTGGATGTTACTTTTTAAACTTAACCATCCAAAAATCTTATGTTTTAATTATTTTTAGTTATTTATTAGGAATGTTTTCAAATATAGAAAAATAAGTCAAACTATTTACAAATATAGAAAAATTTCACAGTCTATCAGGGATAAAGCGCGATAGACTTATATCACTTAAGCGATAGAAGTCTACAACAGTCTGTCGCTAATTGATAGTAAAATTTTTCTATAATTGTAAATAGTTTGATATCTTTTTCATTTATAATAATTTTCTATTTATTAGGACATTTTATACGTCACAAATGAAAAAACAATGTTTTTATTTATGGTTTGGGAAAACAAATCGGAAACAAGAACAGTATACAAGAAACTTGATTTTTGGTGATATTTTGGAAACGCTTCTTACAAATGACAAATGAGACGTAAAATAGTTACCAAATGACAATGTTTCTCAAAAACTGAAAAACAAGAAACATGAAATGAGAAATGAAAATGTCACTAAACGTAATAGTTTTCTTTTTCTTTCTTCCCTAAAATTGCTTTCATATGCAGTTGGGATGGTTCCAGAGAACAGACTTGGACCTCAAATAATCGATACGAGACTTTCGGATCCTAGTCGTAATTTGTAAAAAATTCTGATGTATAGAAGATAATGATCGTTATTTGAGATCTTATGGAAGGTAGTAATATATTGTTGATATTCTCAAATTTCAAATATCTTCCTACATTTTGCATTTGTGATATAGCTCCATCGAACTCTAGGATTGATTTTAGAGGAGTATTTATATTCTCTAGGATTGGTGCAGAGAAATTGTTAGTTGTATGTTGTGGACAAATTCAAGCTGCTATATAATACGTTCAGTTGAGCCAAGAACTGAATTAACCCAATCGTGTAAAAAAAAAAAAAAAAAAACAATTTTAAATTAAACTCCAATCATATAAGTTGAGTTGGGTTTCTTGAGTTGAATGGTTTTTAGCATATTTTTACTTCTTTAGGTTTTTTTCAAAAAAAAACAAAAGAACCGAGTCATTCATGTTGATGCTCTTAAATTTTGGAGTTGTATCAACTAAAACCCTAAATCGAAAATTGTATTTAGTTAAACTTTGGATTTTTCTAAGTGTATTAATTTACATCATCCATTATTTTTTATTTAGAAAAAACATAACTTATAATTTTAGTTGGAAATTGTCTATGCATAAATTTAAATAGGTCCATATTCTAGAACTATCATTTCAAGAAGTATATGTACATGTGAGAATTGATACAAAAACGATTTTTGACGCAATTGTAATGAAAGATTTAAATTAATTTGCCAATAAAAATTGAATAGTTTAATCGCTACAAATTATAAACTTCACATACAATTTGTTAAACAAAATTCAAAGTATAAATTAATATACTCACACAAGTCTAATATTTAAATAGATACAATTAGGAGTTTGTTTCGTGAGAATTCCAATAGTCCCGTCAACTAAACATTTGAATTACCATAGTTATCTTTTTTACTTTTTTTACCATTCTTTTTTTTTTCTTTTATGTATTTCACTATACTTTGTTTGTGTTTTATAATTAAAATAAATATTGTTAACTATCAATCACTCTTTTTGATTTTATTGTTGCTGTTTTTATTTGTCTATAAATATATTCAAATTCAAGTTTAAATTTAAATTAATATTTATTTTATAAAAAACCTTAAATTAACGTATAGTATTTTGTAGGAAAAAAATAACATATAAAAATAATATAAACTATATTAACTTAAAAAGATATTCAAGTTAATAAAGCTAAATATGTTATATAAATTTAAATTGTATTAAATTATTTCTAAGATAATGAACCGTCATAGTGACATTTTTGAAATTTAAAATATTTTCAAGTCGAAACTACCAAACAAATACAACCATTCAAATATTCTAAAATATCTACTAAAATATTTTTAAATCTATAATTTCCAACGTGAAAAGATTTCAGGCATTTACTTGAATTTTGATTGATACAAGTTGTAAAATTTAATTTAATAGTGGAAATTGATATTTTCCTTAAAACTTTAAATATATGTAATTTATTATTAAAAGATAAATAAAATTTGTGTTAAAAATGCTTATTTACAAATTCTGGAATTCTCGATAAGGGTATATAGAGTGAGCAAGAGATGAAACACCAAAAATGGTGAAATTGCATAAGCGACTAGACATCAATGTCGGGAATTTCCTTAGCTTTATCTTTCTGCTTGATTTTCCTCTTTACAATCTCTGAAGCATCCCGTTGCTCGATCGTCGGTAAGAACCCTTCTTCTTCCACCTTCAGTCTTGACTGTGTATTGAAGAAGTTGAGTTCTGTCATATGCAATGCTCTTGACATTACATGTTTTCTATTTGAATCCTTTGGTTTTCATTTGCGTAGCTTTTGAAACCCTTTTGACCTTTAGAGACTTTTCTCGAATTAACTAAGCGGCAAGCAACCAGGTCAATATCTTCCTTCAAGTTTCTCATAGAATTTTTCGAGGATTTTGATAACTTTGACAGACATTTTGAAGAGGAAGACTGAATAAGTGGAAATGTCGTCATTTAAAGAAGGTTTCATGTTTATACTCATCCAAAATTTTCCAAAATCAGTTTTAAGAAAGGTTACCCTTACCTTAGCACCAAGAGGCATCATTACGAGCACAATCAAAATTGATTGTTTGTTTGTTTGTTTTTTAATGATAAGAACCATCAAACAAACAAATAAACAAAAAAACTGAAGATATTGTCTTGAATAATGATATACATAAAATTGGGCTTCATATTTTTCGTGATACCTTCATTGGGTTAATGATCCTTTATGCTTGTGCTTTAAGACTAGAGAAATGGTGGTTTTGGTTTCAGGGTATTTCAGTATTGCACATGTTATGTTGTGATAGCATTCAAGACAAAGAGCTACAAGTTTAGTACCAAACTAATGGATGTTATGCTTTGTTTTGAATCTCCAAATTGTTGTAGATAAGCTTATCTATGCCTTTAAGCATTTGGATTCGGTCAGTAGTGTTTTGATGTGTACTTGTAAAGTAAGAAACGTGACGGAGTGGCCTGAAAGTTGAACTTTATGTACCTGACTGACTTCTGTATGGTAGTGAACATTTTTTGTTCTTTTTAAATGGATGTAAATTTTTTCCTTGATTCACAGGGTTGCCCGTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGATGAAGGAGGTACGGTGTGTTCATCTTGCAAGGTCCTAGAACCTAATCAAGCTTTGAAATGAAGCAGAAGATATTTTTTTATCTGCTTGCACTAGCCATTACCGCTCTACTGGCTTTTGCAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCACGCACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTCTGAAGGGGACTGGCACTCTCTATCTCGCTTCTAGTTCTCATGAAAAGTTCCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCTGTTAATGATGCTCACCAGGTATGTTGGTCTACTTAAATCTCTTCCATGCTTCCGAACTATTCATAAATACTGTGGCTTAGTTGATCTACATCATTTCTGCTTGCTTACAAATTTTAGGGCAGTAAACCCAATAATTTCTTATAAGGTGAAGTAGGAAAATAACCCAAGTATAAGCCAGACTCATGAATGATCAGTCTTGCTACCTTTAGAATTTTTGTTGCCATGCAAAGAGTATTGGAAAGCTTATGGGAGCCTTCTTTTTGAAAGTTGGTGAAGTGAGGGGGTACTTACTTTGTTAGGTGAAGTAAGGTGTAATATCCATTGTTTAGGGTTGGGTTGGGCTAGCTATCCAGAAAAACGAGACATTGTAAAAATCTCATTCTTCTGGATATGTGGTTTTTGGAGGTTTCCTTGAGAAATTTCTTCTTTAAGGCTTAAGAATGTTATATGTGGGTTTAGCATTTACTTCAGTAGTTGTAAGACAGCAAAAAGGCCTTTAGTGCTTTTCCTTGTAGCATTAAACAAGAAAAGAAAGGTATTGTATGTCATATGAGTGCAGTGCATGCCAAAGAAGTGTGGGATCACAATGGTTGAGAAAGCAAATAATGAGATGACTGTTTAAAATTAGCAGAGGCAGTAATATGAACTAAATATTATAATTGAACTATTAGCTAGTCACGTGATATCTTTTCCTCTATTAAAAGACAGCTTGTTTTTTTCATTTTTCAATTCACATTGCTACGACTTTGCTTTAGCATTCTTAAGAAAAATTTAGAGAAGATGCAGCAAGGTGAGGGTGAGGGCAAAAACTAGAAAATACAGCAAAACAAAACTAGAGATAACATTGATCCAATGTATATACATACGCATTACTCCCTCTTACTTTGTCTTTAGGAGTTAATAGCTCTTAATTCACTGATTGACCCAAAAGCCTAAGTTGATGGGTAAAGGCAAATTTAATCTTATATCATATACCACTCTCCCTCAATCGTGGGCTTGAAATATGTAGAAAACCCAACAAGTGGATATCAATATTAATTGGGGAGAAAATAACATTGTAAGGGTTTGAACACAGGACCTTCTGGACCTGATACCAACTTAAATCACAAATTGACCAAAAAATTTAAACTGATGGGTTAAGGCAAATGTAATATTATGTCATCTAACAATGGCTTACCTCCCCTTCCCTTTGTATGCTTTTCTTTATGGGAAAACGAAGTTTCCTGTTTCCTATATATATAAAAAAGGTACCAAAAGGAATGGGATTATGGTTATACGTTCCTTTTCTTTTAGTGGAACAAAGAATTATGAAATCTGGCTCTCAGATGGAACCTTTCTCCAGTTCTTTTAGCGGAACAAAGAATTATGAAATCTGGCTCTCAGATGGAACCTTTCTCCAGTGACTTTCTCCACTGATCTATGAACTGTGGACCAATGTGCATGGTATCATCGGTTTAAACCACTGATCATGCTAGCATTACTTGGTTTTACTAAGTTGCCCGTTTAGACCTTATTTGGATTTTTTTTTTTCAAAATATATTTTTAGTTTAGCAAATAGAGCATAGTGCTTGTACAATTTTGAACTCGAACCAAGCCTCTGATATCCCTTGAATGTTCAACCATTAACACAGGTTGGGAATACGAATGAACATGAGGATCTACAGATGCTCGTCATCATTTCTAGGCCACCAGCCAAAGTGTGCGTATTTTTCTTCCATTTTACATTCTGCATTTCATCTGTATTTGTTTCTAATTGATCAAAGATGGGTCTAAATGGATTATACACTTGCTGTCACATGCGCACACACGTATGCACCCACTTACAAATATGCTATAGTACATCAATCTTTTGAGGCAGCAATTTCAAGCGTCTTCTGGGGGCTTTAGACTCTTGAACAACTAAGATACGATTGGTTTAGACCGAGGAATAAAGACTACAAAATGCCAAATAAATTAGTCTTCTAATTATTCAGTCAAAGTTTACTTTTCTGGTTTTTGCTTTCAGGTTTATTTATGATGACTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGATGAACAGTGTTTCGAAGCGCCAGTAAAGGATGAACTTTGAACCCTTCAATGTTAATCAAGTTTTGTCCTTAGACATAAAGTGTAAAGTCGAACTCTCAAGAAAACAGTGGAATGTGGAACTATAGTGTGAAGATTCAAATCTTCATTGTTCTACTTCAAATTTCTGGTTTTGTTAATAAAGTATCATATTCCCCAATCCTTGCTCATACCATAGCAATGACTGGAAAAGTGGAGTGATAGTCATTTTCTCCACAAGACTTCCCAATGGGCAGACAAAAGGCAGTGAAAGATCTCACAGAAGAACATTTGAGACATTTGGTTGTGGATGAAAGATCTTCCTTCAGATCTAGTAAGGTTCTCTTTGCTCCCGAATGTGTGATGTATAAGGCATTTCGAAGTGATCTATTAATCTACTAATAAATAGTTTAA

mRNA sequence

CTGCATTTCTTATCCAAAACAAAGCAATGAACACTCTAATTCCCACTTCTCCTTGCAATTTCTGCGATATCCCAAGCTTCTTTTCCCACAGAACCGCCATTTCCCTAAAGCTTTCCGCCACAAAAACCAACCACAGATTACGCGCCAATTCCAACGACCTACAAACCCAGGCAGTTGAGGAACCGAAAGAAGAAGAAAATGGGATAGCAGCCGAACCCCAGCAGCAAACCAAGGCGTCCTCTTCTCCTGCACTCGAAAAAGACCTCAAGAAGGTTGTTCAAAAGACTGCTGCAACATTTGCACCAAGGGCCTCTACTGCTTCAAAAAATCCTGCTGTACCTGGAACTACTTTATATACTGTCTTTGAGGTTCAAGGCTATGCCTCAATGATGTTAGGCGGTGTACTATCTTTCAATCTTTTATTCCCCTCAAATGAACCTGATATATGGAGATTAATGGGAATGTGGTCAATATGGATGTTCAGGTTGCCCGTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGATGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCACGCACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTCTGAAGGGGACTGGCACTCTCTATCTCGCTTCTAGTTCTCATGAAAAGTTCCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCTGTTAATGATGCTCACCAGGTTGGGAATACGAATGAACATGAGGATCTACAGATGCTCGTCATCATTTCTAGGCCACCAGCCAAAGTGTTTATTTATGATGACTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGATGAACAGTGTTTCGAAGCGCCAGTAAAGGATGAACTTTGAACCCTTCAATGTTAATCAAGTTTTGTCCTTAGACATAAAGTGTAAAGTCGAACTCTCAAGAAAACAGTGGAATGTGGAACTATAGTGTGAAGATTCAAATCTTCATTGTTCTACTTCAAATTTCTGGTTTTGTTAATAAAGTATCATATTCCCCAATCCTTGCTCATACCATAGCAATGACTGGAAAAGTGGAGTGATAGTCATTTTCTCCACAAGACTTCCCAATGGGCAGACAAAAGGCAGTGAAAGATCTCACAGAAGAACATTTGAGACATTTGGTTGTGGATGAAAGATCTTCCTTCAGATCTAGTAAGGTTCTCTTTGCTCCCGAATGTGTGATGTATAAGGCATTTCGAAGTGATCTATTAATCTACTAATAAATAGTTTAA

Coding sequence (CDS)

ATGAACACTCTAATTCCCACTTCTCCTTGCAATTTCTGCGATATCCCAAGCTTCTTTTCCCACAGAACCGCCATTTCCCTAAAGCTTTCCGCCACAAAAACCAACCACAGATTACGCGCCAATTCCAACGACCTACAAACCCAGGCAGTTGAGGAACCGAAAGAAGAAGAAAATGGGATAGCAGCCGAACCCCAGCAGCAAACCAAGGCGTCCTCTTCTCCTGCACTCGAAAAAGACCTCAAGAAGGTTGTTCAAAAGACTGCTGCAACATTTGCACCAAGGGCCTCTACTGCTTCAAAAAATCCTGCTGTACCTGGAACTACTTTATATACTGTCTTTGAGGTTCAAGGCTATGCCTCAATGATGTTAGGCGGTGTACTATCTTTCAATCTTTTATTCCCCTCAAATGAACCTGATATATGGAGATTAATGGGAATGTGGTCAATATGGATGTTCAGGTTGCCCGTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGATGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCACGCACACCTATTCACAGGCACTCCTGTGAAGAAGTTTTTGTGGTTCTGAAGGGGACTGGCACTCTCTATCTCGCTTCTAGTTCTCATGAAAAGTTCCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCTGTTAATGATGCTCACCAGGTTGGGAATACGAATGAACATGAGGATCTACAGATGCTCGTCATCATTTCTAGGCCACCAGCCAAAGTGTTTATTTATGATGACTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGATGAACAGTGTTTCGAAGCGCCAGTAAAGGATGAACTTTGA

Protein sequence

MNTLIPTSPCNFCDIPSFFSHRTAISLKLSATKTNHRLRANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKKVVQKTAATFAPRASTASKNPAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL

Homology

[Close]

BLAST of Clc09G06990 vs. NCBI nr
Match: GAV80467.1 (Auxin_BP domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 453.0 bits (1164), Expect = 2.1e-123
Identity = 227/326 (69.63%), Postives = 262/326 (80.37%), Query Frame = 0


Query: 1   MNTLIPTSPCNFCDIP------SFFSHRTAISLKLSATKTNHRLRAN-SNDLQTQAVEEP 60
           MN+LIP S CN+           FF +    + K +    + +L+A+ +N++ T+ VE P
Sbjct: 13  MNSLIPNSLCNYHSSKLNSMSNPFFKNIIYTTSKFTFGTKSLKLKASATNEVDTKTVEGP 72

Query: 61  KEEENGIAAEPQQQTK------ASSSPALEKDLKKVVQKTAATFAPRASTASKNPAVPGT 120
           KEEE  +  +  +  K      A ++ AL+KDLKKVVQKTAATFAPRASTA+KNPAVPGT
Sbjct: 73  KEEELQVLKQINETNKTPSISTALAAGALDKDLKKVVQKTAATFAPRASTATKNPAVPGT 132

Query: 121 TLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLPVVRNISELPQDN 180
            LYT+FEVQGYASM LGGVLSFNL+FPSNEPDIWRLMGMWSIWMFRLP+VRNISELPQD+
Sbjct: 133 ALYTIFEVQGYASMFLGGVLSFNLIFPSNEPDIWRLMGMWSIWMFRLPLVRNISELPQDS 192

Query: 181 YGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLASS 240
           YGR GLSHITVAGS+ HGMKEVEVW QTF+P S TPIHRHSCEEVFVVLKG+GTLYLASS
Sbjct: 193 YGRRGLSHITVAGSVFHGMKEVEVWHQTFAPESHTPIHRHSCEEVFVVLKGSGTLYLASS 252

Query: 241 SHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFM 300
           SHEK+PG P E+ I+ NSTF IPVND HQV NTNEHEDLQM+VIISRPP K FIYDDW M
Sbjct: 253 SHEKYPGKPHEYHIFPNSTFHIPVNDVHQVWNTNEHEDLQMIVIISRPPVKAFIYDDWSM 312

Query: 301 PHTAARLKFPYYWDEQCFEAPVKDEL 314
           PHTA++LKFPYYWDE+C +AP KDEL
Sbjct: 313 PHTASKLKFPYYWDEECLQAPPKDEL 338

[Close]

BLAST of Clc09G06990 vs. NCBI nr
Match: KAF7120695.1 (hypothetical protein RHSIM_Rhsim13G0021200 [Rhododendron simsii])

HSP 1 Score: 426.4 bits (1095), Expect = 2.1e-115
Identity = 227/398 (57.04%), Postives = 263/398 (66.08%), Query Frame = 0


Query: 1   MNTLIPTSPCNF---------CDIPSFFSHRTAISLKLSATKTNHRLRANSNDL-QTQAV 60
           MNTLI    CN          C IP       ++SL           RAN +DL   +  
Sbjct: 1   MNTLISMPLCNLRIAKFPSTSCSIPH------SVSLHSQFLYKPFHCRANPSDLIDLKTA 60

Query: 61  EEPKEEENGIAAEPQQQ---------TKASSSPALEKDLKKVVQKTAATFAPRASTASKN 120
           +EP++E +  A E  ++         TKASS P +++DLKKVVQKTA+TFAPRASTA+KN
Sbjct: 61  QEPEQELSNRATEIDEETDIASKVSATKASSGPKIDQDLKKVVQKTASTFAPRASTATKN 120

Query: 121 PAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRL------- 180
           PAVPG+TLY+VFE+QGYASM+LGG LSFNL+FPSNEPDIWRLMGMWS+WMF +       
Sbjct: 121 PAVPGSTLYSVFEIQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSVWMFTIPSLRARD 180

Query: 181 -----------------------------------------------------------P 240
                                                                      P
Sbjct: 181 CSKNEKEALNYLFLLIPLLNVIIPFFWKSFAVVWSADIVAFFAMYTWKAEASHCSTHGVP 240

Query: 241 VVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVV 300
           +VRNI+ELPQDNYGR GLSHIT+AGSLLHGMKEVEVWLQTF+PGSRTPIHRHSCEEVFVV
Sbjct: 241 LVRNIAELPQDNYGRPGLSHITIAGSLLHGMKEVEVWLQTFAPGSRTPIHRHSCEEVFVV 300

Query: 301 LKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRP 314
           LKG+GTLYLAS+SH K+PG P+EFPI++NSTF IPVNDAHQV NTN+ EDLQ+LVIISRP
Sbjct: 301 LKGSGTLYLASNSHLKYPGQPQEFPIFTNSTFQIPVNDAHQVWNTNQGEDLQVLVIISRP 360

[Close]

BLAST of Clc09G06990 vs. NCBI nr
Match: KAG5514383.1 (hypothetical protein RHGRI_035708 [Rhododendron griersonianum])

HSP 1 Score: 416.8 bits (1070), Expect = 1.7e-112
Identity = 228/424 (53.77%), Postives = 267/424 (62.97%), Query Frame = 0


Query: 1   MNTLIPTSPCN---------FCDIPSFFSHRTAISLKLSATKTNHRLRANSNDL-QTQAV 60
           MNTLI T  CN         FC IP       ++SL         + RAN +DL  ++  
Sbjct: 1   MNTLISTPLCNLRIAKFPSTFCSIPH------SVSLHSQFLYKPFQCRANPSDLIDSKTA 60

Query: 61  EEPKEEENGIAAEPQQQ---------TKASSSPALEKDLKKVVQKTAATFAPRASTASKN 120
           +EP++E +  A E  ++         TKASS P +++DLKKVVQKTA+TFAPRASTA+KN
Sbjct: 61  QEPEQELSNRATEIDEETDTASEVSATKASSGPKIDQDLKKVVQKTASTFAPRASTATKN 120

Query: 121 PAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRL------- 180
           PAVPG+TLY+VFE+QGYASM+LGG LSFNL+FPSNEPDIWRLMGMWS+WMF +       
Sbjct: 121 PAVPGSTLYSVFEIQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSVWMFTIPSLRARD 180

Query: 181 -----------------------------------------------------------P 240
                                                                      P
Sbjct: 181 CSKNEKEALNYLFLLIPLLNVIIPFFWKSFAVVWSADIVAFFAMYAWKAEASHCSTHGVP 240

Query: 241 VVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVV 300
           +VRNI+ELPQDNYGR GLSHIT+AGSLLHGMKEVEVWLQTF+PGSRTPIHRHSCEEVFVV
Sbjct: 241 LVRNIAELPQDNYGRPGLSHITIAGSLLHGMKEVEVWLQTFAPGSRTPIHRHSCEEVFVV 300

Query: 301 LKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQ------------------- 314
           LKG+GTLYLA++SH K+PG P+EFPI++NSTF IPVNDAHQ                   
Sbjct: 301 LKGSGTLYLATNSHLKYPGQPQEFPIFTNSTFQIPVNDAHQASVELKRSCSLDREIKQTS 360

[Close]

BLAST of Clc09G06990 vs. NCBI nr
Match: KAG5514382.1 (hypothetical protein RHGRI_035708 [Rhododendron griersonianum])

HSP 1 Score: 406.0 bits (1042), Expect = 3.0e-109
Identity = 228/441 (51.70%), Postives = 267/441 (60.54%), Query Frame = 0


Query: 1   MNTLIPTSPCN---------FCDIPSFFSHRTAISLKLSATKTNHRLRANSNDL-QTQAV 60
           MNTLI T  CN         FC IP       ++SL         + RAN +DL  ++  
Sbjct: 1   MNTLISTPLCNLRIAKFPSTFCSIPH------SVSLHSQFLYKPFQCRANPSDLIDSKTA 60

Query: 61  EEPKEEENGIAAEPQQQ---------TKASSSPALEKDLKKVVQKTAATFAPRASTASKN 120
           +EP++E +  A E  ++         TKASS P +++DLKKVVQKTA+TFAPRASTA+KN
Sbjct: 61  QEPEQELSNRATEIDEETDTASEVSATKASSGPKIDQDLKKVVQKTASTFAPRASTATKN 120

Query: 121 PAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRL------- 180
           PAVPG+TLY+VFE+QGYASM+LGG LSFNL+FPSNEPDIWRLMGMWS+WMF +       
Sbjct: 121 PAVPGSTLYSVFEIQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSVWMFTIPSLRARD 180

Query: 181 -----------------------------------------------------------P 240
                                                                      P
Sbjct: 181 CSKNEKEALNYLFLLIPLLNVIIPFFWKSFAVVWSADIVAFFAMYAWKAEASHCSTHGVP 240

Query: 241 VVRNISELPQDNYGRGGLSHITVAGSLLHGMKE-----------------VEVWLQTFSP 300
           +VRNI+ELPQDNYGR GLSHIT+AGSLLHGMKE                 VEVWLQTF+P
Sbjct: 241 LVRNIAELPQDNYGRPGLSHITIAGSLLHGMKEKLRVLFNRTAEWNFSWQVEVWLQTFAP 300

Query: 301 GSRTPIHRHSCEEVFVVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQ-- 314
           GSRTPIHRHSCEEVFVVLKG+GTLYLA++SH K+PG P+EFPI++NSTF IPVNDAHQ  
Sbjct: 301 GSRTPIHRHSCEEVFVVLKGSGTLYLATNSHLKYPGQPQEFPIFTNSTFQIPVNDAHQAS 360

[Close]

BLAST of Clc09G06990 vs. NCBI nr
Match: KAF7804787.1 (auxin-binding protein T85 [Senna tora])

HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-108
Identity = 219/404 (54.21%), Postives = 257/404 (63.61%), Query Frame = 0


Query: 1   MNTLIPTSPCNF--------------CDIPSFFSHRTAISLKLSAT--KTNHRLRANSND 60
           MNTLI T+P N                 +  F S  + +   LS +  +T   LRA S++
Sbjct: 1   MNTLISTAPTNSHLSGLHFVSPLRTNTKLLRFRSSSSIVGTNLSHSILRTKLPLRATSDE 60

Query: 61  LQTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKKVVQKTAATFAPRASTASKNPAV 120
             TQ V+E   EE     E    T  +SS  ++K+LKKVVQKTA+TFAPRASTA+KNPAV
Sbjct: 61  PNTQTVDERLPEEP--VEESSASTPPTSSAPIDKELKKVVQKTASTFAPRASTATKNPAV 120

Query: 121 PGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMF------------ 180
           PG+ LYTVFEVQGYASM+LGG LSFNL+FPSNEPDIWRLMGMWSIWMF            
Sbjct: 121 PGSVLYTVFEVQGYASMLLGGALSFNLIFPSNEPDIWRLMGMWSIWMFTIPSLRARDCSK 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 NEKEALNYLFLLIPLINVVIPFFWKSFAVVWSADTLAFFGIFFAFSAIALASQCSITVAH 240

Query: 241 ---RLPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSC 300
              RLP+VR+ISE+PQDNYGR GLSHIT+ GS+LHGMKEVEVWLQTF+PG+ TPIHRHSC
Sbjct: 241 SSRRLPLVRSISEIPQDNYGRPGLSHITIVGSILHGMKEVEVWLQTFAPGTYTPIHRHSC 300

Query: 301 EEVFVVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQML 314
           EEVF+VLKG+GTLYLASSSH++ PG P+E  I+ NST  IPVNDAHQ+ NTNEHEDLQ+L
Sbjct: 301 EEVFIVLKGSGTLYLASSSHDRSPGKPQEHLIFPNSTLHIPVNDAHQLWNTNEHEDLQVL 360

[Close]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot
Match: P33490 (Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 7.2e-74
Identity = 124/161 (77.02%), Postives = 141/161 (87.58%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNISELPQ+NYGR GLSH T+AGS+LHGMKE+EVWLQTF+PGSRTPIHRHSCEE+F
Sbjct: 27  LPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGSRTPIHRHSCEEIF 86

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKG G LYL  SSH K+PG P+EF I+ NSTF IPVND HQV NT EHEDLQ+LV+IS
Sbjct: 87  VVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEHEDLQVLVVIS 146

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPV-KDEL 314
           RPP KVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 147 RPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187

[Close]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot
Match: P33487 (Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.1e-73
Identity = 127/160 (79.38%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNIS+LPQDNYGR GLSH+TVAGS+LHGMKEVE+WLQTF+PGS TPIHRHSCEEVF
Sbjct: 41  LPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEVEIWLQTFAPGSETPIHRHSCEEVF 100

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKG+GTLYLA  +H  FPG P EFPI++NST  IP+NDAHQV NT  HEDLQ+LVIIS
Sbjct: 101 VVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHIPINDAHQVKNTG-HEDLQVLVIIS 160

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL 314
           RPP K+FIY+DWFMPHTAARLKFPYYWDEQC +   KDEL
Sbjct: 161 RPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQKDEL 198

[Close]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot
Match: P33491 (Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.2e-72
Identity = 121/161 (75.16%), Postives = 139/161 (86.34%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNISELPQ+NYGR GLSH T+AGS+LHGMKE+EVWLQTF+PG RTPIHRHSCEE+F
Sbjct: 27  LPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTFAPGFRTPIHRHSCEEIF 86

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           +VLKG GTLYL  SSH K+PG P+EF I+ NSTF IPVND HQV NT E EDLQ+L +IS
Sbjct: 87  IVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQVWNTGEQEDLQVLDVIS 146

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPV-KDEL 314
           RPP KVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 147 RPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKDEL 187

[Close]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot
Match: P33488 (Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.4e-66
Identity = 116/158 (73.42%), Postives = 131/158 (82.91%), Query Frame = 0


Query: 156 VVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVV 215
           +VR+IS + Q NYGR G SHITV G+L HG KEVEVWLQTF PG RTPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 216 LKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRP 275
           LKG GTL L SSS  K+PG P+E P++ N+TF IPVND HQV N+NEHEDLQ+LVIISRP
Sbjct: 109 LKGKGTLLLGSSS-LKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 276 PAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL 314
           P K+FIYDDW MPHTAA+LKFPY+WDE C  AP KDEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP-KDEL 204

[Close]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot
Match: P13689 (Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.0e-65
Identity = 116/158 (73.42%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 156 VVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVV 215
           +VR+IS++PQ +YG  GLSHITVAG+L HGMKEVEVWLQT SPG RTPIHRHSCEEVF V
Sbjct: 46  LVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTV 105

Query: 216 LKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRP 275
           LKG GTL + SSS  K+PG P+E P + N+TF IPVND HQV N++EHEDLQ+LVIISRP
Sbjct: 106 LKGKGTLLMGSSS-LKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 165

Query: 276 PAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL 314
           PAK+F+YDDW MPHTAA LKFP+ WDE CFEA  KDEL
Sbjct: 166 PAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA-AKDEL 201

[Close]

BLAST of Clc09G06990 vs. ExPASy TrEMBL
Match: A0A1Q3CJS1 (Auxin_BP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_23928 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.0e-123
Identity = 227/326 (69.63%), Postives = 262/326 (80.37%), Query Frame = 0


Query: 1   MNTLIPTSPCNFCDIP------SFFSHRTAISLKLSATKTNHRLRAN-SNDLQTQAVEEP 60
           MN+LIP S CN+           FF +    + K +    + +L+A+ +N++ T+ VE P
Sbjct: 13  MNSLIPNSLCNYHSSKLNSMSNPFFKNIIYTTSKFTFGTKSLKLKASATNEVDTKTVEGP 72

Query: 61  KEEENGIAAEPQQQTK------ASSSPALEKDLKKVVQKTAATFAPRASTASKNPAVPGT 120
           KEEE  +  +  +  K      A ++ AL+KDLKKVVQKTAATFAPRASTA+KNPAVPGT
Sbjct: 73  KEEELQVLKQINETNKTPSISTALAAGALDKDLKKVVQKTAATFAPRASTATKNPAVPGT 132

Query: 121 TLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLPVVRNISELPQDN 180
            LYT+FEVQGYASM LGGVLSFNL+FPSNEPDIWRLMGMWSIWMFRLP+VRNISELPQD+
Sbjct: 133 ALYTIFEVQGYASMFLGGVLSFNLIFPSNEPDIWRLMGMWSIWMFRLPLVRNISELPQDS 192

Query: 181 YGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLASS 240
           YGR GLSHITVAGS+ HGMKEVEVW QTF+P S TPIHRHSCEEVFVVLKG+GTLYLASS
Sbjct: 193 YGRRGLSHITVAGSVFHGMKEVEVWHQTFAPESHTPIHRHSCEEVFVVLKGSGTLYLASS 252

Query: 241 SHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFM 300
           SHEK+PG P E+ I+ NSTF IPVND HQV NTNEHEDLQM+VIISRPP K FIYDDW M
Sbjct: 253 SHEKYPGKPHEYHIFPNSTFHIPVNDVHQVWNTNEHEDLQMIVIISRPPVKAFIYDDWSM 312

Query: 301 PHTAARLKFPYYWDEQCFEAPVKDEL 314
           PHTA++LKFPYYWDE+C +AP KDEL
Sbjct: 313 PHTASKLKFPYYWDEECLQAPPKDEL 338

[Close]

BLAST of Clc09G06990 vs. ExPASy TrEMBL
Match: A0A4D8ZT07 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_003428 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.8e-97
Identity = 190/355 (53.52%), Postives = 234/355 (65.92%), Query Frame = 0


Query: 37  RLRANSNDL----QTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKK-----VVQKT 96
           R+RA+SN+L      Q+VE+ +E +N +  E      + ++PAL+KDLKK     VVQKT
Sbjct: 20  RIRASSNELDIKTDQQSVEDVQEPDNDLRTEKGSNNSSGTTPALDKDLKKASHFSVVQKT 79

Query: 97  AATFAPRASTASKNPAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMW 156
           AATFAPRASTASKNPAVPGT LYTVFEVQGYAS++LGG LSFNL+FPSNEPD+WRLMGMW
Sbjct: 80  AATFAPRASTASKNPAVPGTVLYTVFEVQGYASLLLGGALSFNLVFPSNEPDLWRLMGMW 139

Query: 157 SIWMFR------------------------------------------------------ 216
           SIWMF                                                       
Sbjct: 140 SIWMFTIPSLRARDCSKNEKEALNYLFLLVPLLNVTIPFFLKSFAVVWSADVVAFFGMYA 199

Query: 217 --------------LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPG 276
                         LP+VRNISE+ +D+YG  G SHIT+AGS++HG KEVEVW QT  PG
Sbjct: 200 WKLGCLALEHSGNGLPIVRNISEMAEDSYGLPGFSHITIAGSIMHGFKEVEVWHQTLGPG 259

Query: 277 SRTPIHRHSCEEVFVVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGN 314
           + TPIHRHSCEE+FVVL+G+GTLYLAS+SH K PGTP+ FP  SNSTF IPV++AHQV N
Sbjct: 260 AGTPIHRHSCEEIFVVLEGSGTLYLASNSHLKHPGTPQHFPFSSNSTFHIPVDNAHQVVN 319

[Close]

BLAST of Clc09G06990 vs. ExPASy TrEMBL
Match: A0A5A7UNW3 (Auxin-binding protein T85 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G002370 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 5.9e-87
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNISELPQDNYGRGGLSHITVAGSLLHG+KEVEVWLQTFSPGS TPIHRHSCEEVF
Sbjct: 12  LPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF 71

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKGTGTLY A SSHEK+PGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS
Sbjct: 72  VVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 131

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA-PVKDEL 314
           RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA PVKDEL
Sbjct: 132 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 172

[Close]

BLAST of Clc09G06990 vs. ExPASy TrEMBL
Match: A0A1S3BS71 (auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 5.9e-87
Identity = 154/161 (95.65%), Postives = 157/161 (97.52%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNISELPQDNYGRGGLSHITVAGSLLHG+KEVEVWLQTFSPGS TPIHRHSCEEVF
Sbjct: 29  LPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF 88

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKGTGTLY A SSHEK+PGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS
Sbjct: 89  VVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 148

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA-PVKDEL 314
           RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA PVKDEL
Sbjct: 149 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 189

[Close]

BLAST of Clc09G06990 vs. ExPASy TrEMBL
Match: A0A0A0K905 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 5.0e-86
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           +P+VRNISELPQDNYGRGGLSHITVAGSLLHG+KEVEVWLQTFSPGS TPIHRHSCEEVF
Sbjct: 29  VPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVF 88

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKGTGTLY A SSHEK PGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS
Sbjct: 89  VVLKGTGTLYFAPSSHEKCPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 148

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA-PVKDEL 314
           RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEA PVKDEL
Sbjct: 149 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 189

[Close]

BLAST of Clc09G06990 vs. TAIR 10
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1 )

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-74
Identity = 127/160 (79.38%), Postives = 142/160 (88.75%), Query Frame = 0


Query: 154 LPVVRNISELPQDNYGRGGLSHITVAGSLLHGMKEVEVWLQTFSPGSRTPIHRHSCEEVF 213
           LP+VRNIS+LPQDNYGR GLSH+TVAGS+LHGMKEVE+WLQTF+PGS TPIHRHSCEEVF
Sbjct: 41  LPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEVEIWLQTFAPGSETPIHRHSCEEVF 100

Query: 214 VVLKGTGTLYLASSSHEKFPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIIS 273
           VVLKG+GTLYLA  +H  FPG P EFPI++NST  IP+NDAHQV NT  HEDLQ+LVIIS
Sbjct: 101 VVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHIPINDAHQVKNTG-HEDLQVLVIIS 160

Query: 274 RPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPVKDEL 314
           RPP K+FIY+DWFMPHTAARLKFPYYWDEQC +   KDEL
Sbjct: 161 RPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQKDEL 198

[Close]

BLAST of Clc09G06990 vs. TAIR 10
Match: AT2G48070.1 (resistance to phytophthora 1 )

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-38
Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 36  HRLRANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKKVVQKTAATFAPRA 95
           HR R+      T    EPK+       +P +    SSS AL KDLKKVV KTAATFAPRA
Sbjct: 23  HRRRSTFRIFATSDGLEPKD-------DPPESPLPSSSSALGKDLKKVVNKTAATFAPRA 82

Query: 96  STASKNPAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLP 155
           STASKNPA+PGTTLY VFEVQGYASM LGGVLSFNLLFPS+EPD+WRLMGMWSIWMF +P
Sbjct: 83  STASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPSSEPDLWRLMGMWSIWMFTIP 138

Query: 156 VVR 159
            +R
Sbjct: 143 SLR 138

[Close]

BLAST of Clc09G06990 vs. TAIR 10
Match: AT2G48070.2 (resistance to phytophthora 1 )

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-38
Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 36  HRLRANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKKVVQKTAATFAPRA 95
           HR R+      T    EPK+       +P +    SSS AL KDLKKVV KTAATFAPRA
Sbjct: 23  HRRRSTFRIFATSDGLEPKD-------DPPESPLPSSSSALGKDLKKVVNKTAATFAPRA 82

Query: 96  STASKNPAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLP 155
           STASKNPA+PGTTLY VFEVQGYASM LGGVLSFNLLFPS+EPD+WRLMGMWSIWMF +P
Sbjct: 83  STASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPSSEPDLWRLMGMWSIWMFTIP 138

Query: 156 VVR 159
            +R
Sbjct: 143 SLR 138

[Close]

BLAST of Clc09G06990 vs. TAIR 10
Match: AT2G48070.3 (resistance to phytophthora 1 )

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-38
Identity = 84/123 (68.29%), Postives = 93/123 (75.61%), Query Frame = 0


Query: 36  HRLRANSNDLQTQAVEEPKEEENGIAAEPQQQTKASSSPALEKDLKKVVQKTAATFAPRA 95
           HR R+      T    EPK+       +P +    SSS AL KDLKKVV KTAATFAPRA
Sbjct: 23  HRRRSTFRIFATSDGLEPKD-------DPPESPLPSSSSALGKDLKKVVNKTAATFAPRA 82

Query: 96  STASKNPAVPGTTLYTVFEVQGYASMMLGGVLSFNLLFPSNEPDIWRLMGMWSIWMFRLP 155
           STASKNPA+PGTTLY VFEVQGYASM LGGVLSFNLLFPS+EPD+WRLMGMWSIWMF +P
Sbjct: 83  STASKNPALPGTTLYKVFEVQGYASMFLGGVLSFNLLFPSSEPDLWRLMGMWSIWMFTIP 138

Query: 156 VVR 159
            +R
Sbjct: 143 SLR 138

The following BLAST results are available for this feature:

BLAST of Clc09G06990 vs. NCBI nr


Match Name	E-value	Identity	Description
GAV80467.1	2.1e-123	69.63	Auxin_BP domain-containing protein [Cephalotus follicularis]	[more]
KAF7120695.1	2.1e-115	57.04	hypothetical protein RHSIM_Rhsim13G0021200 [Rhododendron simsii]	[more]
KAG5514383.1	1.7e-112	53.77	hypothetical protein RHGRI_035708 [Rhododendron griersonianum]	[more]
KAG5514382.1	3.0e-109	51.70	hypothetical protein RHGRI_035708 [Rhododendron griersonianum]	[more]
KAF7804787.1	2.5e-108	54.21	auxin-binding protein T85 [Senna tora]	[more]

BLAST of Clc09G06990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33490	7.2e-74	77.02	Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1	[more]
P33487	2.1e-73	79.38	Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1	[more]
P33491	5.2e-72	75.16	Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1	[more]
P33488	9.4e-66	73.42	Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1	[more]
P13689	8.0e-65	73.42	Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1	[more]

BLAST of Clc09G06990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1Q3CJS1	1.0e-123	69.63	Auxin_BP domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3...	[more]
A0A4D8ZT07	2.8e-97	53.52	Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_003428 PE=4 SV=1	[more]
A0A5A7UNW3	5.9e-87	95.65	Auxin-binding protein T85 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BS71	5.9e-87	95.65	auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1	[more]
A0A0A0K905	5.0e-86	95.03	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1	[more]

BLAST of Clc09G06990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02980.1	1.5e-74	79.38	endoplasmic reticulum auxin binding protein 1	[more]
AT2G48070.1	8.5e-38	68.29	resistance to phytophthora 1	[more]
AT2G48070.2	8.5e-38	68.29	resistance to phytophthora 1	[more]
AT2G48070.3	8.5e-38	68.29	resistance to phytophthora 1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 229..242 score: 55.19 coord: 175..195 score: 83.98 coord: 285..304 score: 82.27 coord: 155..174 score: 73.18 coord: 263..285 score: 82.21 coord: 242..257 score: 71.02 coord: 198..222 score: 88.36
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 153..313 e-value: 1.9E-95 score: 317.2
IPR000526	Auxin-binding protein	PANTHER	PTHR37236	AUXIN-BINDING PROTEIN 1	coord: 153..313
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 152..313 e-value: 1.0E-64 score: 218.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..77
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 153..313
None	No IPR available	CDD	cd02220	cupin_ABP1	coord: 155..306 e-value: 2.24124E-115 score: 327.449
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 152..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G06990.2	Clc09G06990.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0010011	auxin binding