Clc09G06580 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G06580
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Glutaredoxin
Location	ClcChr09: 5155817 .. 5156619 (-)
RNA-Seq Expression	Clc09G06580
Synteny	Clc09G06580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGATATTCCAACTTGCAGAAAAATAAACAGATAACCCCATGACATGCAATCCCACCTCAGTATAAATAGACCACAATGGGAGCTTTAAACTCATCAACAGAACAAAGAAAAAACCAATACTTCTTTCTACACAGAAAGACCACATTCCTAAGAGCCATGGATATGAATGCAGTGAAAGGGTTGGTAGCTGAGAAGCCAGTTGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGACACTTATATCAAGCTTTGGGGCTAATCCTACTGTGTATGAGCTTGATGAGATACCCAATGGGCATCATATTGAGACACTGCTGCTTCAACTAGGATGCCAGCCATGTGTGCCTGCTATTTTCATTGGGCAGAAGTTAATTGGTGGTGCCAGAGAGCTCATGAGCCTGCAAGTCAGGAATGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGAAACAAAAGCTGCAACTTCAGCACAAAACTCTTAAATGTCTTCTCTTTTCTACTTTCTTTCTTTCTTCTTTTTTGTTGGCTGGTTTGGGGGACCCTTGACTCTATTTTGACTTCCAAAGTTAAGAATTGAGAGCACTTTTTACCCTCTCTTGTTCTTCATGTCACACATGCTGATCATGTTGAATAAAGAGGGGTTTCCTTATGACATTTACAAAACACATAATGAATCAAAACGGCTCATGTTTTCTTTCTCCAAATATGTGATATTCTGCACCTTTAGAGACCTAACATGTGATAAACCATATGATGGAAGTGAATGAAAAATAATCCTG

mRNA sequence

CTGATATTCCAACTTGCAGAAAAATAAACAGATAACCCCATGACATGCAATCCCACCTCAGTATAAATAGACCACAATGGGAGCTTTAAACTCATCAACAGAACAAAGAAAAAACCAATACTTCTTTCTACACAGAAAGACCACATTCCTAAGAGCCATGGATATGAATGCAGTGAAAGGGTTGGTAGCTGAGAAGCCAGTTGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGACACTTATATCAAGCTTTGGGGCTAATCCTACTGTGTATGAGCTTGATGAGATACCCAATGGGCATCATATTGAGACACTGCTGCTTCAACTAGGATGCCAGCCATGTGTGCCTGCTATTTTCATTGGGCAGAAGTTAATTGGTGGTGCCAGAGAGCTCATGAGCCTGCAAGTCAGGAATGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGAAACAAAAGCTGCAACTTCAGCACAAAACTCTTAAATGTCTTCTCTTTTCTACTTTCTTTCTTTCTTCTTTTTTGTTGGCTGGTTTGGGGGACCCTTGACTCTATTTTGACTTCCAAAGTTAAGAATTGAGAGCACTTTTTACCCTCTCTTGTTCTTCATGTCACACATGCTGATCATGTTGAATAAAGAGGGGTTTCCTTATGACATTTACAAAACACATAATGAATCAAAACGGCTCATGTTTTCTTTCTCCAAATATGTGATATTCTGCACCTTTAGAGACCTAACATGTGATAAACCATATGATGGAAGTGAATGAAAAATAATCCTG

Coding sequence (CDS)

ATGGGAGCTTTAAACTCATCAACAGAACAAAGAAAAAACCAATACTTCTTTCTACACAGAAAGACCACATTCCTAAGAGCCATGGATATGAATGCAGTGAAAGGGTTGGTAGCTGAGAAGCCAGTTGTGATCTTCAGCAGGAGCCAATGCTCAATGAGCTATACAGTAAAGACACTTATATCAAGCTTTGGGGCTAATCCTACTGTGTATGAGCTTGATGAGATACCCAATGGGCATCATATTGAGACACTGCTGCTTCAACTAGGATGCCAGCCATGTGTGCCTGCTATTTTCATTGGGCAGAAGTTAATTGGTGGTGCCAGAGAGCTCATGAGCCTGCAAGTCAGGAATGAGCTTATGCCATTGCTCATGAGTGCCAGAGCTATATGGGTTTGA

Protein sequence

MGALNSSTEQRKNQYFFLHRKTTFLRAMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV

Homology

[Close]

BLAST of Clc09G06580 vs. NCBI nr
Match: XP_038876744.1 (monothiol glutaredoxin-S1 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MGALNSSTEQRKNQYFFLHRKTTFLRAMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLI 60
           MGALNS TEQRKNQ F L++KTTF +AMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLI
Sbjct: 1   MGALNSLTEQRKNQDFLLNKKTTFPKAMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLI 60

Query: 61  SSFGANPTVYELDEIPNGHHIETLLLQLGCQPCVPAIFIGQKLIGGARELMSLQVRNELM 120
           SSFGANPTVYELDEIPNG HIETLL+QLGCQPCVPAIFIGQKLIGGARELMSLQVRNELM
Sbjct: 61  SSFGANPTVYELDEIPNGRHIETLLIQLGCQPCVPAIFIGQKLIGGARELMSLQVRNELM 120

Query: 121 PLLMSARAIWV 132
           PLLMSARAIWV
Sbjct: 121 PLLMSARAIWV 131

[Close]

BLAST of Clc09G06580 vs. NCBI nr
Match: XP_022149144.1 (monothiol glutaredoxin-S1-like [Momordica charantia])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 111/131 (84.73%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGALNSSTEQRKNQYFFLHRKTTFLRAMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLI 60
           MGA NS T + KN  F L+R+TTF RAMDMNAV+G+VAE+PVVIFSRSQCSMSYT+K+LI
Sbjct: 1   MGASNSLTXKNKN--FLLNRETTFPRAMDMNAVQGMVAERPVVIFSRSQCSMSYTIKSLI 60

Query: 61  SSFGANPTVYELDEIPNGHHIETLLLQLGCQPCVPAIFIGQKLIGGARELMSLQVRNELM 120
           SSFGANPTVYELDEIPNG+HIE+LLLQLGCQPCVPA+FIGQKLIGGARE+MSLQVRNELM
Sbjct: 61  SSFGANPTVYELDEIPNGNHIESLLLQLGCQPCVPAVFIGQKLIGGAREVMSLQVRNELM 120

Query: 121 PLLMSARAIWV 132
           PLLMSARAIWV
Sbjct: 121 PLLMSARAIWV 129

[Close]

BLAST of Clc09G06580 vs. NCBI nr
Match: NP_001295830.1 (monothiol glutaredoxin-S1-like [Cucumis sativus] >XP_008451626.1 PREDICTED: monothiol glutaredoxin-S1-like [Cucumis melo] >AGX01500.1 glutaredoxin [Cucumis sativus] >KAA0068041.1 monothiol glutaredoxin-S6-like [Cucumis melo var. makuwa] >TYK18087.1 monothiol glutaredoxin-S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-49
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. NCBI nr
Match: KAE8646328.1 (hypothetical protein Csa_016873 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 4.2e-49
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 131
           LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIW 103

[Close]

BLAST of Clc09G06580 vs. NCBI nr
Match: XP_022953806.1 (monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023548370.1 monothiol glutaredoxin-S1-like [Cucurbita pepo subsp. pepo] >KAG7014389.1 Monothiol glutaredoxin-S1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGC+PCVP +FIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot
Match: Q9SA68 (Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana OX=3702 GN=GRXS1 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.5e-30
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M  +  L+ +KPVVIFS++ C MS+++K+LIS +GAN TVYELDE+ NG  IE  L++LG
Sbjct: 1   MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C+P VPA+FIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 61  CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot
Match: Q9LYC8 (Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.9e-29
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M +V+ LV +KPVVIFS+S C MS++++TLIS FGA  TVYELD+  NG  IE  L+Q+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C+P VPA+FIGQ+ IGGA ++M+LQV+N+L  +L  A AIWV
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot
Match: Q8L8Z8 (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.6e-28
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M+ +  +V E+PVVI+S+S C MS+T+KTL+  FGANP VYELDEI  G  IE  LL+LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA E+MSL +   L+P+L  A A+WV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot
Match: O23419 (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M+ ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G  IE  L QLG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA ++MSL +   L+P+L    A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot
Match: O23420 (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M  ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G  IE  L QLG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA ++MSL +   L+P+L  A A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of Clc09G06580 vs. ExPASy TrEMBL
Match: A0A6J1D656 (monothiol glutaredoxin-S1-like OS=Momordica charantia OX=3673 GN=LOC111017633 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 111/131 (84.73%), Postives = 123/131 (93.89%), Query Frame = 0


Query: 1   MGALNSSTEQRKNQYFFLHRKTTFLRAMDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLI 60
           MGA NS T + KN  F L+R+TTF RAMDMNAV+G+VAE+PVVIFSRSQCSMSYT+K+LI
Sbjct: 1   MGASNSLTXKNKN--FLLNRETTFPRAMDMNAVQGMVAERPVVIFSRSQCSMSYTIKSLI 60

Query: 61  SSFGANPTVYELDEIPNGHHIETLLLQLGCQPCVPAIFIGQKLIGGARELMSLQVRNELM 120
           SSFGANPTVYELDEIPNG+HIE+LLLQLGCQPCVPA+FIGQKLIGGARE+MSLQVRNELM
Sbjct: 61  SSFGANPTVYELDEIPNGNHIESLLLQLGCQPCVPAVFIGQKLIGGAREVMSLQVRNELM 120

Query: 121 PLLMSARAIWV 132
           PLLMSARAIWV
Sbjct: 121 PLLMSARAIWV 129

[Close]

BLAST of Clc09G06580 vs. ExPASy TrEMBL
Match: U3RJA5 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX8 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.0e-50
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. ExPASy TrEMBL
Match: A0A5A7VQZ7 (Monothiol glutaredoxin-S6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00080 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.0e-50
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. ExPASy TrEMBL
Match: A0A1S3BS02 (monothiol glutaredoxin-S1-like OS=Cucumis melo OX=3656 GN=LOC103492859 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 7.0e-50
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. ExPASy TrEMBL
Match: A0A6J1GP41 (monothiol glutaredoxin-S1-like OS=Cucurbita moschata OX=3662 GN=LOC111456223 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.9e-49
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 28  MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQ 87
           MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGH IETLLLQ
Sbjct: 1   MDMNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHQIETLLLQ 60

Query: 88  LGCQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           LGC+PCVP +FIGQKLIGGARELMSLQVRNELMPLLMSARAIWV
Sbjct: 61  LGCEPCVPVVFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 104

[Close]

BLAST of Clc09G06580 vs. TAIR 10
Match: AT1G03020.1 (Thioredoxin superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 3.2e-31
Identity = 61/102 (59.80%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M  +  L+ +KPVVIFS++ C MS+++K+LIS +GAN TVYELDE+ NG  IE  L++LG
Sbjct: 1   MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELDEMSNGPEIERALVELG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C+P VPA+FIGQ+L+GGA +LMSLQVRN+L  LL  A AIW+
Sbjct: 61  CKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102

[Close]

BLAST of Clc09G06580 vs. TAIR 10
Match: AT3G62930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 2.1e-30
Identity = 60/102 (58.82%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M +V+ LV +KPVVIFS+S C MS++++TLIS FGA  TVYELD+  NG  IE  L+Q+G
Sbjct: 1   MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFSNGQEIEKALVQMG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C+P VPA+FIGQ+ IGGA ++M+LQV+N+L  +L  A AIWV
Sbjct: 61  CKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102

[Close]

BLAST of Clc09G06580 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-29
Identity = 57/102 (55.88%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M+ +  +V E+PVVI+S+S C MS+T+KTL+  FGANP VYELDEI  G  IE  LL+LG
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA E+MSL +   L+P+L  A A+WV
Sbjct: 61  CSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Clc09G06580 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 52/102 (50.98%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M+ ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G  IE  L QLG
Sbjct: 1   MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA ++MSL +   L+P+L    A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

[Close]

BLAST of Clc09G06580 vs. TAIR 10
Match: AT4G15690.1 (Thioredoxin superfamily protein )

HSP 1 Score: 117.1 bits (292), Expect = 1.1e-26
Identity = 53/102 (51.96%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 30  MNAVKGLVAEKPVVIFSRSQCSMSYTVKTLISSFGANPTVYELDEIPNGHHIETLLLQLG 89
           M  ++ +++EK VVIFS++ C MS+T+KTL   FG NPT+YELDEI  G  IE  L QLG
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGREIEQALAQLG 60

Query: 90  CQPCVPAIFIGQKLIGGARELMSLQVRNELMPLLMSARAIWV 132
           C P VP +FIG +L+GGA ++MSL +   L+P+L  A A+W+
Sbjct: 61  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

The following BLAST results are available for this feature:

BLAST of Clc09G06580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876744.1	1.8e-60	93.13	monothiol glutaredoxin-S1 [Benincasa hispida]	[more]
XP_022149144.1	2.5e-54	84.73	monothiol glutaredoxin-S1-like [Momordica charantia]	[more]
NP_001295830.1	1.4e-49	99.04	monothiol glutaredoxin-S1-like [Cucumis sativus] >XP_008451626.1 PREDICTED: mono...	[more]
KAE8646328.1	4.2e-49	99.03	hypothetical protein Csa_016873 [Cucumis sativus]	[more]
XP_022953806.1	1.2e-48	96.15	monothiol glutaredoxin-S1-like [Cucurbita moschata] >XP_023548370.1 monothiol gl...	[more]

BLAST of Clc09G06580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SA68	4.5e-30	59.80	Monothiol glutaredoxin-S1 OS=Arabidopsis thaliana OX=3702 GN=GRXS1 PE=3 SV=1	[more]
Q9LYC8	2.9e-29	58.82	Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana OX=3702 GN=GRXS6 PE=3 SV=1	[more]
Q8L8Z8	5.6e-28	55.88	Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana OX=3702 GN=GRXS2 PE=3 SV=1	[more]
O23419	1.5e-25	50.98	Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana OX=3702 GN=GRXS4 PE=3 SV=1	[more]
O23420	1.5e-25	51.96	Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana OX=3702 GN=GRXS5 PE=3 SV=1	[more]

BLAST of Clc09G06580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D656	1.2e-54	84.73	monothiol glutaredoxin-S1-like OS=Momordica charantia OX=3673 GN=LOC111017633 PE...	[more]
U3RJA5	7.0e-50	99.04	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX8 PE=2 SV=1	[more]
A0A5A7VQZ7	7.0e-50	99.04	Monothiol glutaredoxin-S6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BS02	7.0e-50	99.04	monothiol glutaredoxin-S1-like OS=Cucumis melo OX=3656 GN=LOC103492859 PE=3 SV=1	[more]
A0A6J1GP41	5.9e-49	96.15	monothiol glutaredoxin-S1-like OS=Cucurbita moschata OX=3662 GN=LOC111456223 PE=...	[more]

BLAST of Clc09G06580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03020.1	3.2e-31	59.80	Thioredoxin superfamily protein	[more]
AT3G62930.1	2.1e-30	58.82	Thioredoxin superfamily protein	[more]
AT5G18600.1	3.9e-29	55.88	Thioredoxin superfamily protein	[more]
AT4G15680.1	1.1e-26	50.98	Thioredoxin superfamily protein	[more]
AT4G15690.1	1.1e-26	51.96	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 42..60 score: 29.39 coord: 87..100 score: 36.9 coord: 101..114 score: 34.82
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 34..131 e-value: 7.1E-33 score: 110.5
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 30..130
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 42..104 e-value: 1.9E-8 score: 34.4
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 28..128 e-value: 6.5E-25 score: 88.9
None	No IPR available	PANTHER	PTHR10168:SF200	MONOTHIOL GLUTAREDOXIN-S6	coord: 30..130
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 30..130 score: 19.112434
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 41..122 e-value: 9.09832E-32 score: 106.085
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 31..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G06580.1	Clc09G06580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity