Clc09G06330 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G06330
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA mismatch repair protein PMS1
LocationClcChr09: 4903097 .. 4913102 (-)
RNA-Seq ExpressionClc09G06330
SyntenyClc09G06330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATACATTTCTGGCTCAAGATATTCACATGATGCAGGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTGATGTAGGTTAAATCATGATGTAAATCTTAAGTAGCTTGTTGATTAAGCTAGGACTTCATTTCACTATTTACATTCAATGATTCAATTACTGCACTTGTTTCTCTGCTCTGACTTTTCAGATGGCATTATAATGTTGAGCTGCTCATTTTCAGCTATGTATACTTGTTGCTGGAGCATTAGGTGGACGGTTTGATCATGAGATAGGAAACATCAATGTTCTATGCCGTTTTTCAACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTGTTCATCTTCTCCCAAGGACTCATCACCATGAAATCCATGTTCGCTCATCTGTTGAGGGTCCACATTGTGGTCTCATTCCAATTGGGATGCCTTCTGGAAGCACTACAACCACTGGTCTCCAATGGGATTTGAGTAAGTTCTGTCAATATCCTATTTTCAAATTGTTCTCCTCCCACCTTCTGGATCTAATGCTGTTTTTCGTTCTCAATGAATGGCTGGCTGTGTCATGTTTTAAGCAACTTTGAGATGCAAATTAGCTAACATAATATGATCCATCAGTTTTATTCCTCTTGCTATGAATTCATTCTCAATGAATGGCTGGCTGTGTCATGTTTTAAGCAACTTTGAGCTGCAAATTAGCCAACATAATATGATCCATCAGTTTTATTCCTCTTGCTATGAATTCATTCTTAACTTTATTTTTCAAAAACAACTTCATTGAAAACACGCAAGGAATAGGTCAATTCAACAGCCTGTCACTCAGTTTCCTTAGATTTTCCAGAAACTCCAAAACAAACAACAAATGTGGGGAATGGAGATTTGAACCTCTAACATCAAGAGACGGAGATGTCAATATCTCATTGATGATTTCTTTCCTGATAGATAATGATTACATCATTCTCTCCCTATGTGATACTACTTTGGCATGATCTTCCATTGAATTGTGGCTTACAAGATAAGGAAATGTTTTGGATCTAAGTTAGGGATGTTCTCAAATCTGCCTCAATTAAATGCAAATTTAGGACACTTTTTTCTTTTTCAATTGGAACTCTCTGCTCTGTCTGAACTGTTTATTCCCAATTGGGAAGCTTTTTTTTTTGTAATGGAATACTTTGCAATTTAATGCCTGTTGTTAACTTTTTGGTATTATTAATGTGTATTCCAGATGACACAGAGATGAAGTTTGGAGGTCTGATAAGCACATCAAATATAGTTAAAGAAGAGAAAGTAACAGTGCAATCTGACTCCGATCTTCTCTGGACGATCTCATTAAAAAGCCAAATTTAGCAATGCTTCAATTAACATTCAGCATTAGGTACTTCTTTCTCCATTTAAATAAAAATAATTTTGAAGATCTACCCCCCTTCACATTTGTAGTAGATTTTACAGTATTTGATTTTCAATTAAATTCATTTTGCATGTACCTAAATTTCATTTTTATGTGATTAGGAAGTGTATTTGCAAATGGGTAAAGTTTCTTTTTCTCTCCTGATTTTGGAGATACAGCGCCTTTATATGTGGATGTCAATTGTATTTTGTAACACTTGATAATACTCTCTTTATTTGTTGAGGGCTGAAGTATACTTTATCAGCAGTGACATTTTGATTCTTATAATTTAAATTATGTAAAATACTCCCGAAGTTGAGTTATGTTTTATCCATCCAAAATTTGAAAAGTTTCATTTTAACTTCCGAACTTTAAAATTGTTTCAAGAAGTTACCTTTGGGCATAGCATGTTTGAAAATTTTAACAGTAGAAAATATTAAGATTGTTGTTTCTGTTCATTTTAACTCAAAATATATTGTTAAGACATATCTATAACCATCATTTATGGATCAACTTTTTTCTACTAGTATGTAAATTTATGTAGATGATGTTGTATGTCTTTCAATTTTGCACATCAACTATAGTATCAATTTTTATTTGTTATTTTAATGAAATTTTTATTAAAGAGTATATTTGGTGTGATTTTAAATTGGGAAAAACACATTTTTAGTCCTTGTTTCAATTTAATCCCTAGATTTCAAGATTTACATTTTTAACATTAATGTTTCACTACATACTCATTTTTCATTTTTAGGTTTAATGATAAATTTTAAATAATTAACTTATCAAGTTTCCTTATTTTTCAACACTTTTATAGTAAAATTTAAAAATTTCACTTCATAATTATTTTAAATCAATTTATAGACGTTGACGTCAATGATTAAAACTGAATTCTTAACAAAAAAAATTAAGGTTAAAAATATAAAATCTTGAAATTTAGGAACCAAATTGAAATAAAACTCAAATTTGAAGAGTAAAATTGGAACATTTTGAAACTTAAGGATTAATGTGTAATATTTTGAAACGTAAGTATCAAATAGAAACTAGATTCAAAACTTAAAAGACTAAAAAAAGTATTTTTCTCTTAAAAAATTCGTGATACTTTTGCAAAGTTTGAGTTGAGGCATCAAGACCTATCTTAAAATTCTTGGTATTTTTTATAATTTCTTTTATTTTTTTTAAAGATTTTGTGGTTAGTATTTGTTGATTTTAATACTGTAGGTTTTCATCAAATTTTGGTAAATTTGACGTCTGCTCATACAAACTTTGGTTGATGCTCAAATTTTCACTTGAACGACCCATGTCACATTGATTCCCAACTCTTTTGATCTCAACCATCGACACTATTCCTTTGATGGTAATGACTTTTTCAAAGGCACCTTGGAACTCCTAATCAAAATATTTGTCGAAACAAAGTAACCAAAGTTCTTGAAAATAGGACTGTTGTTACTTTTTTATGGGTTGGACTCCCCCTAAAGGAGGTTGGCTCCAATCTATTTACTATTTTGATATGAATTGGTTCATTTGGAGAAACAAAGTGGGACTTCAACAAACATGAGCCTATCAATTGGTCAACATAATCGAGATCAAATGTTTATGAACTAAAACAATTTCATTTATCCCATATTTGTAACATTATTTTTTCTATGAATAATTATTAAAAAAAAAAATGTTAAACTAAGAATTTTGGTGATTTGTGTTTATTTCATTTTTTTAACTTTGAAAAGTAAGGCGTGTGAACTTTCAATTATATGTCAAATAGTTCTATCAACTATATAAAATATCCAATAAATTCTCAACTTTTAACTTTATTTCTATTAAGTTTCTAAATCGTAAAATGTGTTTAGATTTTTAAACTTTCAATTTCGTGTCTTATTTTTAATTTTCTTCAAAGAATTGAATATTACAAACCCTATTTTGATACAAAATAGAAAGTTTGGACCTATTAGGCAAAATCAAAAGTTAAATTAAAATTTAGAAGCTTGTTAAATTTTTTTTTTTTTTTTTAAGTTAAGTAATACAAACTAGAAAATTCTAGGACTATATATAAAAAAGAAATTAACTCTGATTTGTTTAATATAATTTAAAACTAAAATATAAATTAAACAAATAAAGGGAGGGAAATGGTGGAAATGTCACTGTGGACAGTGGAGGAGTTGAGAGGCCAAAGGTGAAGCTTCATTCCCTCGCAGTTTTTTTGGCGCCAAAATCGGTCATCTTCATCATTGAGTTAGGGTTTTTACACTATTCATGCGAGGATTTTTTCTGGGATTCCAATGGACGTAGGAATTGTTGTCGATTCCCCTACCATTAAGCCCATTAACAAAGGTATTGTCCACCGAATTTGCGCAGGCCAAGTGATTCTTGACCTTTCTTCCGCCGTCAAGGAGTTAGTCGAAAACAGTTTGGACGCCGGAGCCACTAGCATCGAGATTGCCTTGAAAGATTATGGAGAAGAGTGGTTCCAGGTCATTGATAATGGGTCCGGCATTTCTCCCACCAATTTCAGGGTATTTCTCGGAATTCCCATTACGACCGTATGCAGCTGAAGTTTTATTTATTTTTTTTATTTTTATTTTTCCTGTCAAGGCTTTCTTTGTTCGTAGCTTCATCGGTTCCCTCTTTGTGGAAATGACAAATGTCTGTGCAATTATTAACATAGGGATGATAATTAAATCTGTGGTTTAACTCCTATTGAACTTCAATCATTGATACGTTGGAAGGAACTCATTTTTACCCAGTTGATATCTAAGCTTTTATGAATCTGGAATTTCTTGTTGGTTGATACCATTGCATTCTTTACGCGAATAAACTTTCCACTATGTTTGTATTCTAAATGTCGCAGGTTCTTGCTCTTAAGCATCATACGTCAAAATTGTCTGATTTTCCTGATCTGCAGTCTCTAACCACGTATGGTTTCAGAGGAGAAGCACTAAGTTCTCTTTGTTCTCTTGGGACTTTGACTGTTGAAACTAGGACAAAGAATGAGTCTGTTGCAACGCACTTAACTTTTGATCATTCAGGACTACTAGTTGCTGAGAAGAAAACTGCACGCCAAGTTGGAACCACTGTCATGGTTAAGAAGTTATTCTCCAATTTACCTGTGCGTAGTAAAGAGTTCAGTCGTAACATTCGAAAGGAATATGGCAAGCTCATTTCATTATTGAATGTAAGTTTTCTTTCTTGTATATATATTCTATCATTAGTGGGTTAAGTAGGATGTTAAGTAGGTTGTCAAGAGATGCCAAACATGGGCTGTAAGAAGTCTTTATTTGCTCAAATATGGAGACGCATTTTACCCCATCTTCTAATTGTAATTTTTGGTACATTGAGAAAGTTAGCTTGCATTATAACAGGTTAAAGAATAAACTTTACTTTGAGAACTCGTACAACAGAATTCATAAGGAAGGATTACAAGTCTCATTTCTGAAAGAAAAATGGCATGATCATAGATGAACAAGGTAGGGCCTCTATTGGTTACTATCTTATGTAACGTGAAAAAGTTAATTTTACTTTGAGAACTCCTGGGACGATATTGATAAGGAAGGATTTCAAGTCTAATTTCAGAAATAAAAATGGTGGTGATCATAGATGAAGAGGGTAGGGCCTCTATTGGTTACTTCTTGTGTAAATATATTTTTATAATAAGTACGTTTATAAATTGTAACTCCTTTAATGTCATCCAATGAAAACTTCTTATTTATTTTATTATTGTTTTTTTAAATGTATTTTTATATATGAAAAATCATCTCTATTTTTTAACTTTGCTGGTTACTTTTGTTCTGTTTCTCATTGCAGGCCTATGCTGTCATAGCAAGAGGAGTTAGATTTGTATGCACTAATTCTGCAGGGAAAAATGCAAAGTCTGTGGTATTCAAAACTCAAGGAAGTGGTTCCATTAAGGACAACATCATAACAGTGTTTGGTATGAATACCTTCATCTGCTTGGAGTCTGTATCTATATTATTATCGGATGATTGCAAAGTTGAAGGATTTGTATCGAAGAGTGGACAGGGAAGTGGGAGGAATTTGGGAGATCGACAATTCTTTTTTGTAAATAATCGACCTGTGGATATGCCTAAAGTGAGCAAGCTTGTAAATGAGTTATATAAAAGTGCAAACTCCCGACAATATCCGATTGCAATCATGAATTTCACTCTTCCAAGTAAAGCTTGTGATGTCAACGTTACTCCTGATAAGAGAAAAATATTCTTCTCTGATGAAACTCACATTTTGCAAACATTGAGAGAGGAATTACTGAAGATCTATTCACCAACTAATGCCTGTTATTCTGTGAATAAAGTTGAAGAACCTACCGAACAAGTAGATGACCTTGAGCTGTGTTCTGATAATGGGAAATTGAGCATGGTATTGGAACATTTGTCACCTGATGGAGCTGATGATGATTCTTTCAAGAAAATTGAAAATGTGGAACAATCCTCACATACTACTGAGGTATTAAATAGTGATGGTGAGGAAAATATAACCAGAAAGGACTTCGCTCTAAGAATGCATGTCATGAAGAAGGCTGATGCTCTTTTAAAGGATCATGATCAGCATAAGAAATCTTATCTCAGTAGCAAGAAAGGTGTACAAGTTACTTCTTCCTCTCCATGTGTGACCGATAGTGGAACCAATACAAGCCGTGTTCAATCTTCACTTGACAAGTTCGTAACTATAAATAAGAGAAAATATGAAACTTCATCTGCACCGCTGTCTGAAGTACCCGTCTTCAGAAACCAATTTCTTAATAATCAATGGAAGAAAAGCTGTGCCGATAAACCTTCCAAGGATGTAAAATGCACAAATGGAAACTGCCAGGTGTTTAATGATTTTTCAGTAGGGAATGATGAAGACAGCTCGATACAAATTAAAACAGATAGAGTCTTGAGTAAACTTCGTCTTCCACTATCCTCTGCGGACCATAGTGATGATGGAGAAGCAACAGAGGTATACAATCTTTTACATTTGTGGGGGAGGTTTGAAACAACTGGGAGTACCGATAACTTTGTATATAGTTTCCTTTATTGTGTAGAAATAAATTAATTCCCCCTCCCCAGGCGCCCCCCACTCCCCCCCCCCCCCCCCCCCCCCGGAACTAAGATTATCTGGTTCCAAATAATTGATGATTCAAAGTGGCTCAATTGTCCTAGAAATCTATTCGCATGGAAGCCAAGACAAGTAAATTCAGTGAGGCCATAAAAAAAGACTTTATATCCATAATTTAATATAAGCATCAAGTTATTTCTTCAAAACTATTGTGCGTATAGGTGTAATTCGGTGTAACTTCCATCAAGTATTTTAATCTGAGAGCAAGTGGGGTGCATGCTTGGTGGCAAGTGGCCATGTTGGTCCTTTTGATATAATGAATGACATTGTAGGTGTTTTGTTTATTATACCCTTGTCTGTAAAAAAAATTGATGTCGGTAAGATTTCCTGGCCCTTCACATGGCCATTTCTCTTGTAGGAATGTACAGGGGAAGCCAAGGTGCATCCTTCTGTGATAGAATCTACTGCTACACCCACCAAGGAACTTGAGATTATGTCTGAGGATCTTCCGCTGTCCGGCTGTTCAGTACTTCCTTCTGGTTCTATAAAAGAAAGCTCCAGTCCTCAATTGAAGTTATGTTCAACGTTACATTTTGATTTTCATGAGCTGAAGAAAAGGAGGTTGCAGAGGCAGTTGAGATACAAATTGAATGGCTATACATGTGAACGAAAGTTGAAACGGTCTCTGAAATGCTAACATTGTTCAATAGTATTCTATCCACTCTTACAGTGTACGTGAATAATGATTAACTTTTTATCATGGCATGCAGCCACTATGCTGCTGCTACTCTGAAGCTTTCCCAACCTGATAATGAAGACAGGAAAGCAAGAGCTTTAGAAGCAGCTGCTAGGGAGCTGGACAGGCTCTTCAGAAAGAAAGATTTTAGTAGAATGAAGGTCCTCTCATCCCACTTTTTGTACATTTTCTAATGATTGTTGCAGTTGAAACTATTGCTTACTGTAAGTTGATGTTGATACGTAGCTTTCAGTATGTGCTTTTGCGTACAATACCTGTTTATTACAAGCTTTGACGACTTACACTAGTCGGATATGCCACTGGTGACATTTGATTGCTTCCGATAATATTCACTTCTCTAAAGGCCTCATTAGAGTCTATATAGCTATGTTTGGCAATAGTCTCTTTGGGGCATTCTCAAGAAATGAGTTTCCTTATTTTGGGAAGCTTAAGCCAAGGTTGACAGTTGAGAATTCTCTAATGTTCATACAATCTACATCAATCTTGGCTTCTTGTAGGCAGAAAGGATGAAGCAGAGCGTCTTTAGTCTTACTTAGTTGGTCCAATCCCATTGCATTAGTGTATATATTGTTTCCCATCAATTCTTTTTCCACTTGAAGATGAAAGGACTTGTAATTACATCTATTTTATAGGTGATTGGACAATTCAACCTCGGATTTATCATTGGGAAGTTAGATCAAGATCTATTATTGTTGATCAGGTGATTTTCCTTGCATCATCTTGGACTCTTTTGCTAAATTATTTTTCATGCTATACCACAATTTAAATGTATCAATGGAAATATTCAAATTTTAGCATGCGGCTGATGAGAAGTACAATTTTGAGCGACTGTCACAATCGACAATTTTGAACCAACAGCCTTTACTACGGTGAGAGGCTTTGCTGTTCTAAAATGTTTGTTTTAGTTTCTGTTAGAATGAGAATGAGAAATTATGGTAAATACACTGGTTAGCAGACATTGAGAAGAGAGAAAAAAGAAAGTTGGTGTGAAATTCTTCTCTGCTTTTCAAAGGTCTCCTTTAATTATTCTTGCAGGCCGTTGAGGTTGGAATTATCTGCTGAAGAAGAAGTCGTTGTTTCAATTCACATGGATGTAATCAGGTGATTGTAGTTTTTGGAGAAATTATTTTCTTAGTCAAGAAAGGGCCTCATAATTGATTGATTGATTTTGTACTAGAGACACGTATCTTTTCTTTTTCTCTCCTTGTGAGTGTTTGCATCTCCTAAACATTTATCCTTTTCATTACATCAATATTTAAGTTGTTTCTTGTTTCAAAATAATAATGATAATTATTTAGCAAAGGAAACTAATTATAAAAGGGAAGGGAGTAAAGAATAAAAAAAAAGCTAAAATAATAATCTAAACGCAATTATACTGCAGACATACCTACAATCATATTTCTGTCTCTTATCGTCTGCTATAATTTGGTAGTCTCTCTCTATGCATCTACTGGACTATGGAGAATAAATAGTTTGAAATTCATTCTTTTAGATTCCTAACATAGATCAGAAATATGTCATGACCTATTTATCTAATTAACCTAGCATGTAGTGCGTTCAATATTTGAGTTGTACAATAATTCAGCATAATTTGTATGACTCAAACTAGCCAGTTTCAATTTTTTTTAGGTGCCATTGTGCCGCATACAATTTCCATTTTTTTTTCTTTCCATCATTAAGATTGCTTTAGCCGAACCTTATCTCCGTTATCTGTTAAAATCAAATTCTATTCTCTGATGACAGGAAAAATGGATTTACTATAGAGGAAGATCCACATGCTCTACCTGGAAATCGATTCAGATTAAAAGCTGTCCCTTTTAGTAAAAATATAACATTCGGAGTTGAAGGTGGTTGTCGTTTTCCTCGCTGATAGTACTTTAGACATAAATGTTAGTTTAGAGTTTATTTTACCATGTAGAAGCAGAGCTTTCATCTCCGATTTCACAATTTTAGATATGGTAGTTGCGAAGCATGCTTTTTCACATCAAATTAAACTGGGAATAGTTGTATGGGTGCGCAGAGAGAAATAGCGAACGTGGTGGGGGTAGAAGTTGAAAGGAATGGGTTGTCTGTTAGCATGTGGTATAGTTGTTTTTTCCTATATTTGATTTCAAGAGTTCCTGCCTTTGATTATTCTGAAAGACAATGTAAATGCTGAGGTCTCATTATTCAAGAGACAGAGAACCGTACGGTTGAATTGCTTGTATTTTATAGGATGCTTCTTGCTGGCTTTCCAGCGCAACATGCAATGTGATTACTATAATGAAAACAATGGTGTGTCTGAACAGATGTTAAGGACCTGATTTCTACACTTGCTGATAGCGAAGGTGAATGTTCTATAATCGGCTCTTATCGGATGGACACTGCTGATTCAATCTGCCCTCCCGAGTTCGAGCAATGTTGGCATCTCGGGCATGTAGATCTTCTGTGATGATTGGGGATCCTCTAGGGAGAAATGAAATGCAGAAGGTGACACTCTATGATGTATCTCTCTTTTAAGGAATCTGACAAAAGGAAAATAAGTTTCTTCTATTCCTTGCAAGCCTCTGAAACCATTTGTGCATAAATAATAGCTGCACCTCCTGATATGGTTGTTTGTTTCAGATACTGGAGCATTTGGCAGAGCTGAAATCTCCTTGGAACTGTCCTCATGGAAGGCCAACCATGAGACATTTGGTGGATCTTACAACAATTAAAAGGTCAGAAGAAAGTGACGCTGAATGTTGAACGTTTCTTCTTCATC

mRNA sequence

atgtatacatttctggctcaagatattcacatgatgcagggaaccaagatatttgatgaatctgaagatcaggataccacagacctacataaatgtgttgcatatattcttcagtctatgccaaatcaggaggagtctgatctatgtatacttgttgctggagcattaggtggacggtttgatcatgagataggaaacatcaatgttctatgccgtttttcaaccacgcgcataatccttctgtctgatgattgtcttgttcatcttctcccaaggactcatcaccatgaaatccatgttcgctcatctgttgagggtccacattgtggtctcattccaattgggatgccttctggaagcactacaaccactggtctccaatgggatttgaatgacacagagatgaagtttggagcattaggccaagtgattcttgacctttcttccgccgtcaaggagttagtcgaaaacagtttggacgccggagccactagcatcgagattgccttgaaagattatggagaagagtggttccaggtcattgataatgggtccggcatttctcccaccaatttcaggtctctaaccacgtatggtttcagaggagaagcactaagttctctttgttctcttgggactttgactgttgaaactaggacaaagaatgagtctgttgcaacgcacttaacttttgatcattcaggactactagttgctgagaagaaaactgcacgccaagttggaaccactgtcatggttaagaagttattctccaatttacctgtgcgtagtaaagagttcagtcgtaacattcgaaaggaatatggcaagctcatttcattattgaatgcctatgctgtcatagcaagaggagttagatttgtatgcactaattctgcagggaaaaatgcaaagtctgtggtattcaaaactcaaggaagtggttccattaaggacaacatcataacagtgtttggtatgaataccttcatctgcttggagtctgtatctatattattatcggatgattgcaaagttgaaggatttgtatcgaagagtggacagggaagtgggaggaatttgggagatcgacaattcttttttgtaaataatcgacctgtggatatgcctaaagtgagcaagcttgtaaatgagttatataaaagtgcaaactcccgacaatatccgattgcaatcatgaatttcactcttccaagtaaagcttgtgatgtcaacgttactcctgataagagaaaaatattcttctctgatgaaactcacattttgcaaacattgagagaggaattactgaagatctattcaccaactaatgcctgttattctgtgaataaagttgaagaacctaccgaacaagtagatgaccttgagctgtgttctgataatgggaaattgagcatggtattggaacatttgtcacctgatggagctgatgatgattctttcaagaaaattgaaaatgtggaacaatcctcacatactactgaggtattaaatagtgatggtgaggaaaatataaccagaaaggacttcgctctaagaatgcatgtcatgaagaaggctgatgctcttttaaaggatcatgatcagcataagaaatcttatctcagtagcaagaaaggtgtacaagttacttcttcctctccatgtgtgaccgatagtggaaccaatacaagccgtgttcaatcttcacttgacaagttcgtaactataaataagagaaaatatgaaacttcatctgcaccgctgtctgaagtacccgtcttcagaaaccaatttcttaataatcaatggaagaaaagctgtgccgataaaccttccaaggatgtaaaatgcacaaatggaaactgccaggtgtttaatgatttttcagtagggaatgatgaagacagctcgatacaaattaaaacagatagagtcttgagtaaacttcgtcttccactatcctctgcggaccatagtgatgatggagaagcaacagaggaatgtacaggggaagccaaggtgcatccttctgtgatagaatctactgctacacccaccaaggaacttgagattatgtctgaggatcttccgctgtccggctgttcagtacttccttctggttctataaaagaaagctccagtcctcaattgaagttatgttcaacgttacattttgattttcatgagctgaagaaaaggaggttgcagaggcagttgagatacaaattgaatggctatacatgtgaacgaaagttgaaacgccactatgctgctgctactctgaagctttcccaacctgataatgaagacaggaaagcaagagctttagaagcagctgctagggagctggacaggctcttcagaaagaaagattttagtagaatgaaggtgattggacaattcaacctcggatttatcattgggaagttagatcaagatctattattgttgatcaggccgttgaggttggaattatctgctgaagaagaagtcgttgtttcaattcacatggatgtaatcaggaaaaatggatttactatagaggaagatccacatgctctacctggaaatcgattcagattaaaagctgtcccttttagtaaaaatataacattcggagttgaagatgttaaggacctgatttctacacttgctgatagcgaaggtgaatgttctataatcggctcttatcggatggacactgctgattcaatctgccctcccgagttcgagcaatgttggcatctcgggcatgtagatcttctgtgatgattggggatcctctagggagaaatgaaatgcagaagatactggagcatttggcagagctgaaatctccttggaactgtcctcatggaaggccaaccatgagacatttggtggatcttacaacaattaaaaggtcagaagaaagtgacgctgaatgttgaacgtttcttcttcatc

Coding sequence (CDS)

ATGTATACATTTCTGGCTCAAGATATTCACATGATGCAGGGAACCAAGATATTTGATGAATCTGAAGATCAGGATACCACAGACCTACATAAATGTGTTGCATATATTCTTCAGTCTATGCCAAATCAGGAGGAGTCTGATCTATGTATACTTGTTGCTGGAGCATTAGGTGGACGGTTTGATCATGAGATAGGAAACATCAATGTTCTATGCCGTTTTTCAACCACGCGCATAATCCTTCTGTCTGATGATTGTCTTGTTCATCTTCTCCCAAGGACTCATCACCATGAAATCCATGTTCGCTCATCTGTTGAGGGTCCACATTGTGGTCTCATTCCAATTGGGATGCCTTCTGGAAGCACTACAACCACTGGTCTCCAATGGGATTTGAATGACACAGAGATGAAGTTTGGAGCATTAGGCCAAGTGATTCTTGACCTTTCTTCCGCCGTCAAGGAGTTAGTCGAAAACAGTTTGGACGCCGGAGCCACTAGCATCGAGATTGCCTTGAAAGATTATGGAGAAGAGTGGTTCCAGGTCATTGATAATGGGTCCGGCATTTCTCCCACCAATTTCAGGTCTCTAACCACGTATGGTTTCAGAGGAGAAGCACTAAGTTCTCTTTGTTCTCTTGGGACTTTGACTGTTGAAACTAGGACAAAGAATGAGTCTGTTGCAACGCACTTAACTTTTGATCATTCAGGACTACTAGTTGCTGAGAAGAAAACTGCACGCCAAGTTGGAACCACTGTCATGGTTAAGAAGTTATTCTCCAATTTACCTGTGCGTAGTAAAGAGTTCAGTCGTAACATTCGAAAGGAATATGGCAAGCTCATTTCATTATTGAATGCCTATGCTGTCATAGCAAGAGGAGTTAGATTTGTATGCACTAATTCTGCAGGGAAAAATGCAAAGTCTGTGGTATTCAAAACTCAAGGAAGTGGTTCCATTAAGGACAACATCATAACAGTGTTTGGTATGAATACCTTCATCTGCTTGGAGTCTGTATCTATATTATTATCGGATGATTGCAAAGTTGAAGGATTTGTATCGAAGAGTGGACAGGGAAGTGGGAGGAATTTGGGAGATCGACAATTCTTTTTTGTAAATAATCGACCTGTGGATATGCCTAAAGTGAGCAAGCTTGTAAATGAGTTATATAAAAGTGCAAACTCCCGACAATATCCGATTGCAATCATGAATTTCACTCTTCCAAGTAAAGCTTGTGATGTCAACGTTACTCCTGATAAGAGAAAAATATTCTTCTCTGATGAAACTCACATTTTGCAAACATTGAGAGAGGAATTACTGAAGATCTATTCACCAACTAATGCCTGTTATTCTGTGAATAAAGTTGAAGAACCTACCGAACAAGTAGATGACCTTGAGCTGTGTTCTGATAATGGGAAATTGAGCATGGTATTGGAACATTTGTCACCTGATGGAGCTGATGATGATTCTTTCAAGAAAATTGAAAATGTGGAACAATCCTCACATACTACTGAGGTATTAAATAGTGATGGTGAGGAAAATATAACCAGAAAGGACTTCGCTCTAAGAATGCATGTCATGAAGAAGGCTGATGCTCTTTTAAAGGATCATGATCAGCATAAGAAATCTTATCTCAGTAGCAAGAAAGGTGTACAAGTTACTTCTTCCTCTCCATGTGTGACCGATAGTGGAACCAATACAAGCCGTGTTCAATCTTCACTTGACAAGTTCGTAACTATAAATAAGAGAAAATATGAAACTTCATCTGCACCGCTGTCTGAAGTACCCGTCTTCAGAAACCAATTTCTTAATAATCAATGGAAGAAAAGCTGTGCCGATAAACCTTCCAAGGATGTAAAATGCACAAATGGAAACTGCCAGGTGTTTAATGATTTTTCAGTAGGGAATGATGAAGACAGCTCGATACAAATTAAAACAGATAGAGTCTTGAGTAAACTTCGTCTTCCACTATCCTCTGCGGACCATAGTGATGATGGAGAAGCAACAGAGGAATGTACAGGGGAAGCCAAGGTGCATCCTTCTGTGATAGAATCTACTGCTACACCCACCAAGGAACTTGAGATTATGTCTGAGGATCTTCCGCTGTCCGGCTGTTCAGTACTTCCTTCTGGTTCTATAAAAGAAAGCTCCAGTCCTCAATTGAAGTTATGTTCAACGTTACATTTTGATTTTCATGAGCTGAAGAAAAGGAGGTTGCAGAGGCAGTTGAGATACAAATTGAATGGCTATACATGTGAACGAAAGTTGAAACGCCACTATGCTGCTGCTACTCTGAAGCTTTCCCAACCTGATAATGAAGACAGGAAAGCAAGAGCTTTAGAAGCAGCTGCTAGGGAGCTGGACAGGCTCTTCAGAAAGAAAGATTTTAGTAGAATGAAGGTGATTGGACAATTCAACCTCGGATTTATCATTGGGAAGTTAGATCAAGATCTATTATTGTTGATCAGGCCGTTGAGGTTGGAATTATCTGCTGAAGAAGAAGTCGTTGTTTCAATTCACATGGATGTAATCAGGAAAAATGGATTTACTATAGAGGAAGATCCACATGCTCTACCTGGAAATCGATTCAGATTAAAAGCTGTCCCTTTTAGTAAAAATATAACATTCGGAGTTGAAGATGTTAAGGACCTGATTTCTACACTTGCTGATAGCGAAGGTGAATGTTCTATAATCGGCTCTTATCGGATGGACACTGCTGATTCAATCTGCCCTCCCGAGTTCGAGCAATGTTGGCATCTCGGGCATGTAGATCTTCTGTGA

Protein sequence

MYTFLAQDIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNINVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQWDLNDTEMKFGALGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRSLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDGADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSKLRLPLSSADHSDDGEATEECTGEAKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPSGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCERKLKRHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLLLIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIGSYRMDTADSICPPEFEQCWHLGHVDLL
Homology
[Close]
BLAST of Clc09G06330 vs. NCBI nr
Match: KAA0068005.1 (DNA mismatch repair protein PMS1 [Cucumis melo var. makuwa] >TYK18122.1 DNA mismatch repair protein PMS1 [Cucumis melo var. makuwa])

HSP 1 Score: 1533.5 bits (3969), Expect = 0.0e+00
Identity = 815/1010 (80.69%), Postives = 851/1010 (84.26%), Query Frame = 0 

Query: 8    DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
            + +  QGTKIFDESEDQDTTDLHKCVAYILQS+PNQ ES+LCILVAGALGGRFDHEIGNI
Sbjct: 99   EFYAKQGTKIFDESEDQDTTDLHKCVAYILQSIPNQ-ESNLCILVAGALGGRFDHEIGNI 158

Query: 68   NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
            NVLCRFSTTRIILLSDDCL+HLLPRTHHHEI + SSVEGPHCGLIPIGMPSGSTTTTGLQ
Sbjct: 159  NVLCRFSTTRIILLSDDCLIHLLPRTHHHEILIHSSVEGPHCGLIPIGMPSGSTTTTGLQ 218

Query: 128  WDLNDTEMKFGAL----------------------------------------------- 187
            WDL+DTEMKFG L                                               
Sbjct: 219  WDLSDTEMKFGGLISTSNIVKEEKGFHTFDASIISGITMEVGNAVDSPTIKPINKGIVHR 278

Query: 188  ---GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR---- 247
               GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR    
Sbjct: 279  ICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLAL 338

Query: 248  --------------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVA 307
                          SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVA
Sbjct: 339  KHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVA 398

Query: 308  EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNS 367
            EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNS
Sbjct: 399  EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNS 458

Query: 368  AGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGR 427
            AGKNAKSVVFKTQGSGSIKDNIITVFGMNTF CLESVSILLSDDCKVEGFVSKSGQGSGR
Sbjct: 459  AGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVSILLSDDCKVEGFVSKSGQGSGR 518

Query: 428  NLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRK 487
            N+GDRQFFFVNNRPVDMPKVSKLVNELYK ANSRQYPIAI+NFTLPSKACDVNVTPDKRK
Sbjct: 519  NMGDRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPIAILNFTLPSKACDVNVTPDKRK 578

Query: 488  IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLS 547
            IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKL M LEH S
Sbjct: 579  IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLCMSLEHFS 638

Query: 548  PDGA-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKK 607
             DG              DDDSF KI+ VEQSSH+TEVLNSD EEN+TRKDFALRMH  KK
Sbjct: 639  SDGGDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVLNSDVEENVTRKDFALRMHGTKK 698

Query: 608  ADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSS 667
            ADALL DHDQHK++YLS+KK V VT SSP +  +GT+TSRVQSSLDKFVTINKRK ETSS
Sbjct: 699  ADALLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDTSRVQSSLDKFVTINKRKIETSS 758

Query: 668  APLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRV 727
            APLSEVPV RNQFLNNQ KKSC D  SKD+KCTNGNC+VF+DFSVGNDEDSSIQIKTDRV
Sbjct: 759  APLSEVPVLRNQFLNNQRKKSCPDITSKDIKCTNGNCRVFDDFSVGNDEDSSIQIKTDRV 818

Query: 728  LSKLRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSV 787
             SK+ LP SSADHSDDGEATEE TGE  AKVH SVIESTA+PTK+LEI+SEDLPL  CS+
Sbjct: 819  FSKVGLPPSSADHSDDGEATEEDTGEAIAKVHSSVIESTASPTKDLEIISEDLPLPVCSI 878

Query: 788  LPSGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLK 847
             PSG +KESSSPQLKLCST HFDFHELKKRR+QRQLRYKLNGYTCER KLK HYAAAT+K
Sbjct: 879  QPSGLLKESSSPQLKLCSTFHFDFHELKKRRIQRQLRYKLNGYTCERKKLKCHYAAATVK 938

Query: 848  LSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL------ 907
            LSQPDNEDRKARALEAAARELD+LFRKKDF RMKVIGQFNLGFIIGKLDQDL +      
Sbjct: 939  LSQPDNEDRKARALEAAARELDKLFRKKDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAA 998

Query: 908  -------------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGN 909
                               L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDPHALPGN
Sbjct: 999  DEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPHALPGN 1058

[Close]
BLAST of Clc09G06330 vs. NCBI nr
Match: KAG6575837.1 (ATPase family AAA domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1508.0 bits (3903), Expect = 0.0e+00
Identity = 807/1011 (79.82%), Postives = 840/1011 (83.09%), Query Frame = 0 

Query: 8    DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
            D +  QGTKIFDESED+DTTDLHKCVAYILQSMPN EES+LCILVAGALGGRFDHEIGNI
Sbjct: 1383 DFYAKQGTKIFDESEDEDTTDLHKCVAYILQSMPNLEESNLCILVAGALGGRFDHEIGNI 1442

Query: 68   NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
            NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHV SSVEGPHCGLIPIGMPSGSTTT GLQ
Sbjct: 1443 NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVDSSVEGPHCGLIPIGMPSGSTTTNGLQ 1502

Query: 128  WDLNDTEMKFGAL----------------------------------------------- 187
            WDL DTEMKFG L                                               
Sbjct: 1503 WDLTDTEMKFGGLISSSNKVKGEKGFYAIDARIISEITMDVGIAVDSPTIKPINKGIVHR 1562

Query: 188  ---GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR---- 247
               GQVILDLSSAVKELVENSLDAGATS+EI+LKDYGEEWFQVIDNGSGISPTNFR    
Sbjct: 1563 ICSGQVILDLSSAVKELVENSLDAGATSVEISLKDYGEEWFQVIDNGSGISPTNFRVLAL 1622

Query: 248  --------------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVA 307
                          SLTTYGFRGEALSSLCSLG LTVETRTKNESVATHLTFDHSGLLVA
Sbjct: 1623 RHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVETRTKNESVATHLTFDHSGLLVA 1682

Query: 308  EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNS 367
            EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNS
Sbjct: 1683 EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNS 1742

Query: 368  AGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGR 427
            AGKNAKSVVFKTQGSGSIKDNIITVFGM TF CLESVSILLSDDCKVEGFVSKSGQGSGR
Sbjct: 1743 AGKNAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVSILLSDDCKVEGFVSKSGQGSGR 1802

Query: 428  NLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRK 487
            NLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRK
Sbjct: 1803 NLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRK 1862

Query: 488  IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLS 547
            IFFSDETHILQ LREELLKIYSP NACYSVNKVEEPT+QVD +ELCSD  KLSM++EH S
Sbjct: 1863 IFFSDETHILQRLREELLKIYSPINACYSVNKVEEPTKQVDSVELCSDKRKLSMLVEHFS 1922

Query: 548  PD-------------GADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKK 607
            PD               +DDS K IENVEQSS T EV NSDGEENITRKDFALR+H MKK
Sbjct: 1923 PDEGKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVENSDGEENITRKDFALRVHGMKK 1982

Query: 608  ADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSS 667
            ADA LKD+DQH+K+  SSKK  Q+T SSPCVT +GT TSRVQSSLDKFVT NKRKYET S
Sbjct: 1983 ADAFLKDYDQHRKTCFSSKKCEQITPSSPCVTVTGTGTSRVQSSLDKFVTKNKRKYETLS 2042

Query: 668  APLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRV 727
            APLSEVP+ RNQFLNNQWKK  AD PSKDVKC +G+CQVF+DFS GNDEDSSIQ  TDRV
Sbjct: 2043 APLSEVPILRNQFLNNQWKKISADNPSKDVKCKHGDCQVFDDFSEGNDEDSSIQTNTDRV 2102

Query: 728  LSKLRLPLSSADHSDDGEAT-EECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCS 787
             ++L +PLSSADHSDDGE T EECT E  AKV  SVIEST TP K+LE MSEDLPLS  S
Sbjct: 2103 FNELGIPLSSADHSDDGETTEEECTEEAIAKVPHSVIESTGTPIKDLE-MSEDLPLSDSS 2162

Query: 788  VLPSGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATL 847
            VLPSG +KESSSPQLKLCST HFDFHELKKRR+QRQLRYKLNGY CER KL  HYAAATL
Sbjct: 2163 VLPSGFMKESSSPQLKLCSTFHFDFHELKKRRMQRQLRYKLNGYICERKKLTCHYAAATL 2222

Query: 848  KLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL----- 907
            KLSQPDNEDRKARALEAAA+ELDRLFRK+DFSRMKVIGQFNLGFIIGKLDQDL +     
Sbjct: 2223 KLSQPDNEDRKARALEAAAKELDRLFRKEDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHA 2282

Query: 908  --------------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPG 909
                                L+RPLRLELSAEEEVVVSIHMDVIRKNGF +EEDPHALPG
Sbjct: 2283 ADEKYNFERLSQSTILNQQPLLRPLRLELSAEEEVVVSIHMDVIRKNGFVLEEDPHALPG 2342

[Close]
BLAST of Clc09G06330 vs. NCBI nr
Match: XP_038899185.1 (DNA mismatch repair protein PMS1 isoform X1 [Benincasa hispida])

HSP 1 Score: 1352.8 bits (3500), Expect = 0.0e+00
Identity = 715/827 (86.46%), Postives = 737/827 (89.12%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRVLALKHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLGTLTVETRT NESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETRTNNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTT+MVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK
Sbjct: 146 TARQVGTTIMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGMNTF CLESVSILLSDDCK+EGFVSKSGQGSGRNLG
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVSILLSDDCKIEGFVSKSGQGSGRNLG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKA DVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKAYDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDG 500
           SDETHILQTLREELLKIYSPTNACYSVNKVEEPT+QVD LELCSDNGKLSM+LEH SPDG
Sbjct: 326 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTKQVDSLELCSDNGKLSMLLEHFSPDG 385

Query: 501 A-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         DDDSFK+I+N EQSSHTTEVLNSDGEENITRKDF LRMH MK ADA
Sbjct: 386 GDLRVASSHQPLADDDDSFKEIKNAEQSSHTTEVLNSDGEENITRKDFTLRMHGMKNADA 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
           L+KD DQHKK+YLSSKKGVQVT SSP VT  GT+TSRVQSSLDKFVTINKRKYE  SAPL
Sbjct: 446 LIKDRDQHKKTYLSSKKGVQVTPSSPSVTVGGTDTSRVQSSLDKFVTINKRKYENLSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           +EVP+ RNQFLNNQWKKSCADKPSKDV+CT+GNCQ F+DFSVGNDEDSSIQIKTDRV SK
Sbjct: 506 TEVPILRNQFLNNQWKKSCADKPSKDVECTHGNCQAFDDFSVGNDEDSSIQIKTDRVSSK 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           L LPLSSADHSDDGEATE+CTGE  AKVHPSVIES+ATPTK+LEIMSEDLPLSGCSVLPS
Sbjct: 566 LSLPLSSADHSDDGEATEKCTGEAIAKVHPSVIESSATPTKDLEIMSEDLPLSGCSVLPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSP LKLCST HFDFHELKKRR QR+LRYKLNGYTCER KLK HYAAATLKLSQ
Sbjct: 626 GFMKESSSPLLKLCSTFHFDFHELKKRRSQRRLRYKLNGYTCERKKLKCHYAAATLKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
           PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDL +         
Sbjct: 686 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPLRLELSAEEEVVVSIHMDV RKNGFTIEEDP AL  NRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLRLELSAEEEVVVSIHMDVFRKNGFTIEEDPRALSSNRFR 805

[Close]
BLAST of Clc09G06330 vs. NCBI nr
Match: XP_008451591.1 (PREDICTED: DNA mismatch repair protein PMS1 [Cucumis melo])

HSP 1 Score: 1310.8 bits (3391), Expect = 0.0e+00
Identity = 696/827 (84.16%), Postives = 725/827 (87.67%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLALKHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGMNTF CLESVSILLSDDCKVEGFVSKSGQGSGRN+G
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVSILLSDDCKVEGFVSKSGQGSGRNMG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYK ANSRQYPIAI+NFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPIAILNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDG 500
           SDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKL M LEH S DG
Sbjct: 326 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLCMSLEHFSSDG 385

Query: 501 A-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         DDDSF KI+ VEQSSH+TEVLNSD EEN+TRKDFALRMH  KKADA
Sbjct: 386 GDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVLNSDVEENVTRKDFALRMHGTKKADA 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
           LL DHDQHK++YLS+KK V VT SSP +  +GT+TSRVQSSLDKFVTINKRK ETSSAPL
Sbjct: 446 LLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDTSRVQSSLDKFVTINKRKIETSSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVPV RNQFLNNQ KKSC D  SKD+KCTNGNC+VF+DFSVGNDEDSSIQIKTDRV SK
Sbjct: 506 SEVPVLRNQFLNNQRKKSCPDITSKDIKCTNGNCRVFDDFSVGNDEDSSIQIKTDRVFSK 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           + LP SSADHSDDGEATEE TGE  AKVH SVIESTA+PTK+LEI+SEDLPL  CS+ PS
Sbjct: 566 VGLPPSSADHSDDGEATEEDTGEAIAKVHSSVIESTASPTKDLEIISEDLPLPVCSIQPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSPQLKLCST HFDFHELKKRR+QRQLRYKLNGYTCER KLK HYAAAT+KLSQ
Sbjct: 626 GLLKESSSPQLKLCSTFHFDFHELKKRRIQRQLRYKLNGYTCERKKLKCHYAAATVKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
           PDNEDRKARALEAAARELD+LFRKKDF RMKVIGQFNLGFIIGKLDQDL +         
Sbjct: 686 PDNEDRKARALEAAARELDKLFRKKDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDPHALPGNRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPHALPGNRFR 805

[Close]
BLAST of Clc09G06330 vs. NCBI nr
Match: XP_011659356.1 (DNA mismatch repair protein PMS1 [Cucumis sativus] >KGN44927.1 hypothetical protein Csa_016327 [Cucumis sativus])

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 689/827 (83.31%), Postives = 721/827 (87.18%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLALKHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGMNTF CLESV ILLSDDCKV+GFVSKSGQGSGRNLG
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVCILLSDDCKVDGFVSKSGQGSGRNLG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAI+NFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAILNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDG 500
           SDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKLSM+LEH S DG
Sbjct: 326 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLSMLLEHFSSDG 385

Query: 501 A-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         DDDSF KI+NVEQS H+TE+LNSD EEN TRKDFALR H  KKAD 
Sbjct: 386 GDLRDASSHQPKTDDDDSFNKIKNVEQSPHSTEMLNSDDEENATRKDFALRTHGTKKADV 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
            L DHDQHK++YLS+KKGV VT  SP ++ +GT+TSRVQSSLDKFVTINKRK ET SAPL
Sbjct: 446 PLNDHDQHKRTYLSNKKGVHVTPFSPLLSVTGTDTSRVQSSLDKFVTINKRKSETLSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVPV RNQFLNNQWKK+C D  SKD++CTNGN QVF+DF VGNDED SIQ KTDRV+SK
Sbjct: 506 SEVPVLRNQFLNNQWKKTCPDIASKDIECTNGNFQVFDDFVVGNDEDGSIQFKTDRVVSK 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           + LP SSADHSDDGEATEECTGE  AKVH SVIESTA+PTK+L +MSEDLPL GCS+ PS
Sbjct: 566 VYLPPSSADHSDDGEATEECTGEAVAKVHSSVIESTASPTKDLAMMSEDLPLPGCSIQPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSPQLKLCST HFDFHELKKRR QRQLR+KLNGYTCER KLK HYAAATLKLSQ
Sbjct: 626 GFLKESSSPQLKLCSTFHFDFHELKKRRFQRQLRFKLNGYTCERKKLKCHYAAATLKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
            DNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDL +         
Sbjct: 686 TDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDP +LPGNRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPRSLPGNRFR 805

[Close]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match: Q941I6 (DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.0e-208
Identity = 433/845 (51.24%), Postives = 558/845 (66.04%), Query Frame = 0 

Query: 117 PSGSTTTTGLQWDLNDTEMKFGALGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEE 176
           PS +TT++ L   +N   +     GQVILDLSSAVKELVENSLDAGATSIEI L+DYGE+
Sbjct: 7   PSPTTTSSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGED 66

Query: 177 WFQVIDNGSGISPTNFR------------------SLTTYGFRGEALSSLCSLGTLTVET 236
           +FQVIDNG GISPTNF+                  +LTTYGFRGEALSSLC+LG LTVET
Sbjct: 67  YFQVIDNGCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVET 126

Query: 237 RTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKL 296
           RTKNE VAT LTFDHSGLL AEKKTARQ+GTTV V+KLFSNLPVRSKEF RNIRKEYGKL
Sbjct: 127 RTKNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKL 186

Query: 297 ISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSI 356
           +SLLNAYA+IA+GVRFVC+N+ GKN KSVV  TQG GS+KDNIITVFG++TF  L+ VSI
Sbjct: 187 VSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSI 246

Query: 357 LLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIA 416
            +S+DC+VEGF+SK GQG+GRNL DRQ+FF+N RPVDMPKVSKLVNELYK  +SR+YP+ 
Sbjct: 247 CVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVT 306

Query: 417 IMNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQ 476
           I++F +P  ACD+NVTPDKRK+FFSDET ++ +LRE L +IYS +NA Y VN+ EE +EQ
Sbjct: 307 ILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENSEQ 366

Query: 477 VDDLELCSDNGKLSMVLEHLSPDGADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFA 536
            D   + S   K +++ E +  D +        E +E+ + +   +  D    + +  F 
Sbjct: 367 PDKAGVSSFQKKSNLLSEGIVLDVSSKTRLG--EAIEKENPSLREVEIDNSSPMEKFKFE 426

Query: 537 LRMHVMKKADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDS----GTNTSRVQSSLDKF 596
           ++    KK +  L  HD        S KG+   + +  VTD+     + +S  QS+L+ F
Sbjct: 427 IKACGTKKGEGSLSVHDVTHLDKTPS-KGLPQLNVTEKVTDASKDLSSRSSFAQSTLNTF 486

Query: 597 VTINKRKYETSSAPLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGND 656
           VT+ KRK+E  S  LSE PV RNQ  + + +KS  +  +   +C     Q+  D  V + 
Sbjct: 487 VTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFEVRALASRCLVEGDQL--DDMVISK 546

Query: 657 EDSSIQIKTDRVLSKLRLPLSSADHSDDGEATEECTGEAKVHPSVIESTATPTKELEIMS 716
           ED +   + D  L     P + AD+ +  E   E     +      ++T T   ++E +S
Sbjct: 547 EDMT-PSERDSELGNRISPGTQADNVERHEREHE--KPIRFEEPTSDNTLT-KGDVERVS 606

Query: 717 EDLPLSGCSVLPSGSIKES--SSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCE-- 776
           ED P     +    ++ +S   S   K+ STL F F  L+ RRL+R  R +  GY  +  
Sbjct: 607 EDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLSRLQSTGYVSKCM 666

Query: 777 --RKLKRHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFII 836
              + K+ +AAATL+LSQPD+E+RKARAL AA  EL+RLFRK+DF RM+V+GQFNLGFII
Sbjct: 667 NTPQPKKCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFII 726

Query: 837 GKLDQDLLL-------------------------LIRPLRLELSAEEEVVVSIHMDVIRK 896
            KL++DL +                         L++PL LELS EEEV V +HMD+IR+
Sbjct: 727 AKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMDIIRE 786

Query: 897 NGFTIEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIGSYRMDTA 909
           NGF +EE+P A PG  FRL+A+P+SKNITFGVED+KDLISTL D+ GECS+  SY+    
Sbjct: 787 NGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGECSVASSYKTSKT 842

[Close]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match: P54278 (Mismatch repair endonuclease PMS2 OS=Homo sapiens OX=9606 GN=PMS2 PE=1 SV=2)

HSP 1 Score: 331.3 bits (848), Expect = 3.6e-89
Identity = 272/824 (33.01%), Postives = 404/824 (49.03%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRSLT---- 200
           GQV+L LS+AVKELVENSLDAGAT+I++ LKDYG +  +V DNG G+   NF  LT    
Sbjct: 29  GQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCGVEEENFEGLTLKHH 88

Query: 201 --------------TYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                         T+GFRGEALSSLC+L  +T+ T   +  V T L FDH+G ++ +  
Sbjct: 89  TSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHASAKVGTRLMFDHNGKIIQKTP 148

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
             R  GTTV V++LFS LPVR KEF RNI+KEY K++ +L+AY +I+ G+R  CTN  G+
Sbjct: 149 YPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQLGQ 208

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTF--------------ICLE---SVSILLSDDCK 380
             +  V  T GS SIK+NI +VFG                  +C E   S S  L +   
Sbjct: 209 GKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVCEEYGLSCSDALHNLFY 268

Query: 381 VEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLP 440
           + GF+S+   G GR+  DRQFFF+N RP D  KV +LVNE+Y   N  QYP  ++N ++ 
Sbjct: 269 ISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVD 328

Query: 441 SKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELC 500
           S+  D+NVTPDKR+I   +E  +L  L+  L+ ++        VNK+    + + D+E  
Sbjct: 329 SECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS-----DVNKLNVSQQPLLDVE-- 388

Query: 501 SDNGKLSMVLEHLSPDGADDDSFKKIENVEQS-SHTTEVLNSDGEENITRKDFALRMHVM 560
                      +L    A D     +E  +QS S  T     D   +  R+ F+LR    
Sbjct: 389 ----------GNLIKMHAADLEKPMVEKQDQSPSLRTGEEKKDVSISRLREAFSLRHTTE 448

Query: 561 KKADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYET 620
            K  +      + ++S L  K+G+  +S+S  ++D G               +  +K   
Sbjct: 449 NKPHS--PKTPEPRRSPLGQKRGMLSSSTSGAISDKG--------------VLRPQKEAV 508

Query: 621 SSAPLSEVPVFRNQFLNNQWKKSCA-DKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKT 680
           SS+     P  R +   +    S + D     +  T  +C   ++++  +  D   Q   
Sbjct: 509 SSSHGPSDPTDRAEVEKDSGHGSTSVDSEGFSIPDTGSHCS--SEYAASSPGDRGSQ--- 568

Query: 681 DRVLSKLRLPLSSADHSD-DGEATEECTG-EAKVHPSVIESTATPT-----KELEIMSED 740
           + V S+ + P +    SD D  + +E TG + +V P    + ATP      KE  + S D
Sbjct: 569 EHVDSQEKAPKTDDSFSDVDCHSNQEDTGCKFRVLPQP-TNLATPNTKRFKKEEILSSSD 628

Query: 741 LPLSGCSVLPSGSIKESSSPQL-----KLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER 800
           +    C  L +     +S   +     K    L F    L KR   +QL ++      + 
Sbjct: 629 I----CQKLVNTQDMSASQVDVAVKINKKVVPLDFSMSSLAKR--IKQLHHEAQ----QS 688

Query: 801 KLKRHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKL 860
           + +++Y     K+   +N        +AA  EL +   K  F+ M++IGQFNLGFII KL
Sbjct: 689 EGEQNYRKFRAKICPGEN--------QAAEDELRKEISKTMFAEMEIIGQFNLGFIITKL 748

Query: 861 DQDLLL-------------------------LIRPLRLELSAEEEVVVSIHMDVIRKNGF 891
           ++D+ +                         LI P  L L+A  E V+  ++++ RKNGF
Sbjct: 749 NEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGF 795

[Close]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match: F1NQJ3 (Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3)

HSP 1 Score: 311.2 bits (796), Expect = 3.9e-83
Identity = 260/842 (30.88%), Postives = 391/842 (46.44%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRSLT---- 200
           GQV+L L +AVKELVENSLDAGAT+I++ LKD+G E  +V DNG G+   NF  LT    
Sbjct: 28  GQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGGGVEEENFEGLTLKHY 87

Query: 201 --------------TYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                         T+GFRGEALSSLC+L  +T+ T  K+  V T L FDH+G +  +  
Sbjct: 88  TSKIQDFSDLIHVETFGFRGEALSSLCALSDVTISTCHKSAKVGTRLVFDHNGKITQKAP 147

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
             RQ GTTV +++LF  LPVR KEF RNI+KEY K++ +L AY +I++GVR  CTN  G+
Sbjct: 148 YPRQQGTTVSIQQLFHTLPVRHKEFQRNIKKEYAKMVQILQAYCIISKGVRINCTNQVGQ 207

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGM--------------NTFICLE---SVSILLSDDCK 380
             KS V  T G  ++K+NI  VFG               N  +C E     + L      
Sbjct: 208 GKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPPNEAVCEEYGLKSTDLPEKLYS 267

Query: 381 VEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLP 440
           + GF+S+   G GR+  DRQFFF+N RP D  KV KLVNE+Y   N  QYP  ++N  + 
Sbjct: 268 ITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLYNKHQYPFIVLNICVD 327

Query: 441 SKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELC 500
           S+  D+NVTPDKR+I   +E  +L  L+  L++++        VNK            L 
Sbjct: 328 SECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGS-----DVNK------------LN 387

Query: 501 SDNGKLSMVLEHLSPDGADDDSFKKIENVEQSSHT-TEVLNSDGEENIT----RKDFALR 560
            +   L +V    +P G  +  +     VE S H+ TE  +S+G+  +T    R+ F+L 
Sbjct: 388 VNQNLLDIVGNVKAPPGDAEKPW-----VEMSHHSETENPSSEGKRVMTLSRLRESFSL- 447

Query: 561 MHVMKKADALLKDHDQHKKSYLSSKKGVQV--TSSSPCVTDSGTNTSRVQSSLDKFVTIN 620
                             +SY  S K V+   +SS     D+  +T R Q +      + 
Sbjct: 448 ---------------HQTESYFQSPKKVKQRHSSSKQLSLDTILSTVRTQKA------VL 507

Query: 621 KRKYETSSAPLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSS 680
               E+     S++PV R                 K     +G C      +  N  ++ 
Sbjct: 508 SEDSESCHEMKSKMPVPRKYL-------------RKVDDIDSGFCSTSESDAGYNTPEAG 567

Query: 681 IQIKTDRVLSKLRLPLSSADHSDDGEATEECTGEAKVHPSVIESTATPTKELEI----MS 740
             + ++ V + +     S++     E  +      K     I+   T  K   +      
Sbjct: 568 SCVISESVNNPIEEEFCSSEEQHQNEYLKTVGHSEKSLECDIQVLGTEHKLNRVNDCNNQ 627

Query: 741 EDLPLSGCSVLP--------SGSIKESSSPQLKLCSTLHF-----DFHELKKRRLQRQLR 800
            +LP    + LP        +   K    P+++  +T ++        E+KK+ +  +  
Sbjct: 628 TNLPQEATNSLPRVRRFKNEADDFKAGIHPKVE--NTRNYMPCVDVLVEVKKKTVPLEFS 687

Query: 801 YKLNGYTCERKLK--------RHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDF 860
            K       + ++        ++Y     K+S  +N        + A  EL +   K+ F
Sbjct: 688 MKALAERVRKIVQQQQKCTETQNYRRFRAKISPGEN--------KVAEDELRKEISKEMF 747

Query: 861 SRMKVIGQFNLGFIIGKLDQDLLL-------------------------LIRPLRLELSA 891
           ++M++IGQFNLGFII KL+ DL +                         LI P  L L+A
Sbjct: 748 AKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTA 802

[Close]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match: Q54QA0 (Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum OX=44689 GN=pms1 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 9.8e-79
Identity = 263/929 (28.31%), Postives = 409/929 (44.03%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRSLT---- 200
           GQVI DLS AVKEL+ENS+DAGAT++EI LK+YGEE+ +VIDNGSG+ P+NF +LT    
Sbjct: 16  GQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSGVEPSNFVALTMKHC 75

Query: 201 --------------TYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                         TYGFRGEALSSLCSL    + TRTKN+  A  L FD  G +  +  
Sbjct: 76  TSKLESFSDLLSIETYGFRGEALSSLCSLSNCIITTRTKNQVTAQRLVFDKEGKIQTQTP 135

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
            AR+VGTTV +  LF  LPVR +EF RNI+KEY KL+++L AYA+I+   R  C N AGK
Sbjct: 136 VAREVGTTVQLSNLFKGLPVRYQEFKRNIKKEYAKLLTILQAYALISTNTRITCYNQAGK 195

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDC-KVEGFVSKSGQGSG--- 380
           + +S V  T    +I+DN+I VFG      L+  +   SD   KV G +SK G GSG   
Sbjct: 196 SPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFT--ASDSLFKVNGLISKIGIGSGTGQ 255

Query: 381 -------------------------------------RNLGDRQFFFVNNRPVDMPKVSK 440
                                                R+  DRQFFFVN+RP +  K++K
Sbjct: 256 SISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSRSCADRQFFFVNSRPFEHSKLAK 315

Query: 441 LVNELYKSANSR-QYPIAIMNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIY 500
            +N LY+S + R  YP+ I N  +P+   DVNVTPDKR IF   E  +L  + + L  ++
Sbjct: 316 EINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTMW 375

Query: 501 SPTNACYSVNKVEEPT---EQVDDLELCSDNGKLSMVLEHLSPDGADDDSFKKIENVEQS 560
               + +  N++ + T   E  +D    +   K+S      +    +D++  KI    + 
Sbjct: 376 ETAQSVFDTNQLGQFTFNDENENDNSNNNKQSKISSFPNLYTLKTEEDENNNKITTPIKK 435

Query: 561 SHTTEVLNSDGEENITRKDFALRMHVMKKADALLKDHDQHKKSYL--SSKKGVQVTSSSP 620
             TT   +S    +  +K             +    ++++ ++ L         +T   P
Sbjct: 436 HSTTTTTSSLNSPSSNKKS-------SNSTSSSSSSNNKNNRNNLEEDGDDSFDITDQQP 495

Query: 621 ---CVTDSGTNTSRVQSSLDKFVTINKRKY-----ETSSAPLSEVPVFRNQFLNNQWKKS 680
                 D   N S  +  L K    NK+K      E         PVF N   +     S
Sbjct: 496 LKRAKYDGNYNNSNKKPELPKTPYPNKKKNNENEDEDEDEDNYVQPVFSNVNKSKNSSNS 555

Query: 681 CADKPSKD-------VKCTNGNCQVF-NDF-------------------SVGNDEDSSIQ 740
            +     D       +  +NGN   F +DF                   ++ N+ +S+  
Sbjct: 556 GSSNSLDDIIDDNEFISRSNGNSSNFMDDFEFKGSSNNIGSSSNGIKLKTISNNNNSNNS 615

Query: 741 IKTDRVLSKL----------RLPLSSADHSDDGEATE--------------------ECT 800
             +++++  +          + P      +DDG+  E                    +  
Sbjct: 616 NNSNKIIDDINKTIDKMKQQQQPQQKMGLNDDGDDEEQQKQKQQQQQQKRKQQQQQQQIE 675

Query: 801 GEAKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPSGSIKESSSPQLKLCSTL------ 860
            E +      +   + T ++ I ++   +S   ++ +G+  + ++P +   + +      
Sbjct: 676 EEEEETIDGYKQKNSKTFDITIKTDLNTISKQYLIRNGTFDKDNNPIIPNTALVVSNDDM 735

Query: 861 --------HFDFHELKKRRLQR---------QLRYKLNGYTCERKLKRHYAAATLKLSQP 889
                    FD + +     ++         QL  K +        K+   AAT   SQ 
Sbjct: 736 VVNNNNSNEFDQNSIITTTSEKCCIVDKSIPQLDGKFSTSLGGIGAKQQQKAATQVTSQL 795

[Close]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match: P54279 (Mismatch repair endonuclease PMS2 OS=Mus musculus OX=10090 GN=Pms2 PE=2 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 5.2e-72
Identity = 247/831 (29.72%), Postives = 371/831 (44.65%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFRSLT---- 200
           GQVIL LS+AVKEL+ENS+DAGAT+I++ LKDYG +  +V DNG G+   NF  L     
Sbjct: 29  GQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCGVEEENFEGLALKHH 88

Query: 201 --------------TYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                         T+GFRGEALSSLC+L  +T+ T   + SV T L FDH+G +  +  
Sbjct: 89  TSKIQEFADLTQVETFGFRGEALSSLCALSDVTISTCHGSASVGTRLVFDHNGKITQKTP 148

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
             R  GTTV V+ LF  LPVR KEF RNI+KEY K++ +L AY +I+ GVR  CTN  G+
Sbjct: 149 YPRPKGTTVSVQHLFYTLPVRYKEFQRNIKKEYSKMVQVLQAYCIISAGVRVSCTNQLGQ 208

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGF-VSKSGQ------ 380
             +  V  T G+  +K+NI +VFG      L     L   D   E + +S SG+      
Sbjct: 209 GKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVCEEYGLSTSGRHKTFST 268

Query: 381 ------------GSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFT 440
                       G  +  G   F      PV   +   L    Y   N  QYP  ++N +
Sbjct: 269 FRASFHSARTAPGGVQQTG--SFSSSIRGPVTQQRSLSLSMRFYHMYNRHQYPFVVLNVS 328

Query: 441 LPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLE 500
           + S+  D+NVTPDKR+I   +E  +L  L+  L+ ++         NK+    + + D+E
Sbjct: 329 VDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDS-----DANKLNVNQQPLLDVE 388

Query: 501 LCSDNGKLSMVLEHLSPDGADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHV 560
              +  KL          G  D+S     +++ ++    V       +I+R   A  +H 
Sbjct: 389 --GNLVKLHTAELEKPVPGKQDNS----PSLKSTADEKRV------ASISRLREAFSLHP 448

Query: 561 MKKADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVT------- 620
            K+  +   +  +  +S+ S K+GV  +  S  ++  G     ++ S DK V+       
Sbjct: 449 TKEIKSRGPETAELTRSFPSEKRGVLSSYPSDVISYRG-----LRGSQDKLVSPTDSPGD 508

Query: 621 -INKRKYETSSAPLS---------EVPVFRNQFLNNQWKKSCADKPSKD-VKCTNGNCQV 680
            +++ K E  S   S           P   + F ++    S  D+PS++ + C + +C+ 
Sbjct: 509 CMDREKIEKDSGLSSTSAGSEEEFSTPEVASSFSSDYNVSSLEDRPSQETINCGDLDCRP 568

Query: 681 FNDFSVGNDEDSSIQIKTDRVLSKLRLPLSSADHSDDGE-ATEECTGEAKVHPSVIESTA 740
                    ED   Q K         LPL+    ++     TEE      +   +    +
Sbjct: 569 PGTGQSLKPEDHGYQCKA--------LPLARLSPTNAKRFKTEERPSNVNISQRLPGPQS 628

Query: 741 TPTKELEIMSEDLPLSGCSVLPSGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKL 800
           T   E+++                +IK +     K    L F    L KR  Q      L
Sbjct: 629 TSAAEVDV----------------AIKMN-----KRIVLLEFSLSSLAKRMKQ------L 688

Query: 801 NGYTCERKLKRHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNL 860
                + K +  Y     K+   +N        +AA  EL +   K  F+ M+++GQFNL
Sbjct: 689 QHLKAQNKHELSYRKFRAKICPGEN--------QAAEDELRKEISKSMFAEMEILGQFNL 748

Query: 861 GFIIGKLDQDLLL-------------------------LIRPLRLELSAEEEVVVSIHMD 891
           GFI+ KL +DL L                         LI P  L L+A  E V+  +++
Sbjct: 749 GFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLE 792

[Close]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match: A0A5D3D2J3 (Thiamine diphosphokinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00500 PE=3 SV=1)

HSP 1 Score: 1533.5 bits (3969), Expect = 0.0e+00
Identity = 815/1010 (80.69%), Postives = 851/1010 (84.26%), Query Frame = 0 

Query: 8    DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
            + +  QGTKIFDESEDQDTTDLHKCVAYILQS+PNQ ES+LCILVAGALGGRFDHEIGNI
Sbjct: 99   EFYAKQGTKIFDESEDQDTTDLHKCVAYILQSIPNQ-ESNLCILVAGALGGRFDHEIGNI 158

Query: 68   NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
            NVLCRFSTTRIILLSDDCL+HLLPRTHHHEI + SSVEGPHCGLIPIGMPSGSTTTTGLQ
Sbjct: 159  NVLCRFSTTRIILLSDDCLIHLLPRTHHHEILIHSSVEGPHCGLIPIGMPSGSTTTTGLQ 218

Query: 128  WDLNDTEMKFGAL----------------------------------------------- 187
            WDL+DTEMKFG L                                               
Sbjct: 219  WDLSDTEMKFGGLISTSNIVKEEKGFHTFDASIISGITMEVGNAVDSPTIKPINKGIVHR 278

Query: 188  ---GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR---- 247
               GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR    
Sbjct: 279  ICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLAL 338

Query: 248  --------------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVA 307
                          SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVA
Sbjct: 339  KHHTSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVA 398

Query: 308  EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNS 367
            EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNS
Sbjct: 399  EKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNS 458

Query: 368  AGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGR 427
            AGKNAKSVVFKTQGSGSIKDNIITVFGMNTF CLESVSILLSDDCKVEGFVSKSGQGSGR
Sbjct: 459  AGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVSILLSDDCKVEGFVSKSGQGSGR 518

Query: 428  NLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRK 487
            N+GDRQFFFVNNRPVDMPKVSKLVNELYK ANSRQYPIAI+NFTLPSKACDVNVTPDKRK
Sbjct: 519  NMGDRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPIAILNFTLPSKACDVNVTPDKRK 578

Query: 488  IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLS 547
            IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKL M LEH S
Sbjct: 579  IFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLCMSLEHFS 638

Query: 548  PDGA-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKK 607
             DG              DDDSF KI+ VEQSSH+TEVLNSD EEN+TRKDFALRMH  KK
Sbjct: 639  SDGGDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVLNSDVEENVTRKDFALRMHGTKK 698

Query: 608  ADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSS 667
            ADALL DHDQHK++YLS+KK V VT SSP +  +GT+TSRVQSSLDKFVTINKRK ETSS
Sbjct: 699  ADALLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDTSRVQSSLDKFVTINKRKIETSS 758

Query: 668  APLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRV 727
            APLSEVPV RNQFLNNQ KKSC D  SKD+KCTNGNC+VF+DFSVGNDEDSSIQIKTDRV
Sbjct: 759  APLSEVPVLRNQFLNNQRKKSCPDITSKDIKCTNGNCRVFDDFSVGNDEDSSIQIKTDRV 818

Query: 728  LSKLRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSV 787
             SK+ LP SSADHSDDGEATEE TGE  AKVH SVIESTA+PTK+LEI+SEDLPL  CS+
Sbjct: 819  FSKVGLPPSSADHSDDGEATEEDTGEAIAKVHSSVIESTASPTKDLEIISEDLPLPVCSI 878

Query: 788  LPSGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLK 847
             PSG +KESSSPQLKLCST HFDFHELKKRR+QRQLRYKLNGYTCER KLK HYAAAT+K
Sbjct: 879  QPSGLLKESSSPQLKLCSTFHFDFHELKKRRIQRQLRYKLNGYTCERKKLKCHYAAATVK 938

Query: 848  LSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL------ 907
            LSQPDNEDRKARALEAAARELD+LFRKKDF RMKVIGQFNLGFIIGKLDQDL +      
Sbjct: 939  LSQPDNEDRKARALEAAARELDKLFRKKDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAA 998

Query: 908  -------------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGN 909
                               L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDPHALPGN
Sbjct: 999  DEKYNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPHALPGN 1058

[Close]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match: A0A1S3BSM9 (DNA mismatch repair protein PMS1 OS=Cucumis melo OX=3656 GN=LOC103492825 PE=3 SV=1)

HSP 1 Score: 1310.8 bits (3391), Expect = 0.0e+00
Identity = 696/827 (84.16%), Postives = 725/827 (87.67%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLALKHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGMNTF CLESVSILLSDDCKVEGFVSKSGQGSGRN+G
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVSILLSDDCKVEGFVSKSGQGSGRNMG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYK ANSRQYPIAI+NFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKGANSRQYPIAILNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDG 500
           SDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKL M LEH S DG
Sbjct: 326 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLCMSLEHFSSDG 385

Query: 501 A-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         DDDSF KI+ VEQSSH+TEVLNSD EEN+TRKDFALRMH  KKADA
Sbjct: 386 GDLRDASSHQPLADDDDSFNKIKEVEQSSHSTEVLNSDVEENVTRKDFALRMHGTKKADA 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
           LL DHDQHK++YLS+KK V VT SSP +  +GT+TSRVQSSLDKFVTINKRK ETSSAPL
Sbjct: 446 LLNDHDQHKRTYLSNKKDVHVTPSSPFLCVTGTDTSRVQSSLDKFVTINKRKIETSSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVPV RNQFLNNQ KKSC D  SKD+KCTNGNC+VF+DFSVGNDEDSSIQIKTDRV SK
Sbjct: 506 SEVPVLRNQFLNNQRKKSCPDITSKDIKCTNGNCRVFDDFSVGNDEDSSIQIKTDRVFSK 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           + LP SSADHSDDGEATEE TGE  AKVH SVIESTA+PTK+LEI+SEDLPL  CS+ PS
Sbjct: 566 VGLPPSSADHSDDGEATEEDTGEAIAKVHSSVIESTASPTKDLEIISEDLPLPVCSIQPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSPQLKLCST HFDFHELKKRR+QRQLRYKLNGYTCER KLK HYAAAT+KLSQ
Sbjct: 626 GLLKESSSPQLKLCSTFHFDFHELKKRRIQRQLRYKLNGYTCERKKLKCHYAAATVKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
           PDNEDRKARALEAAARELD+LFRKKDF RMKVIGQFNLGFIIGKLDQDL +         
Sbjct: 686 PDNEDRKARALEAAARELDKLFRKKDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDPHALPGNRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPHALPGNRFR 805

[Close]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match: A0A0A0K976 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396420 PE=3 SV=1)

HSP 1 Score: 1301.2 bits (3366), Expect = 0.0e+00
Identity = 689/827 (83.31%), Postives = 721/827 (87.18%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATSIEI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSIEISLKDYGEEWFQVIDNGSGISPTNFRVLALKHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLGTLTVET+TKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGTLTVETKTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRF+CTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFLCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGMNTF CLESV ILLSDDCKV+GFVSKSGQGSGRNLG
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESVCILLSDDCKVDGFVSKSGQGSGRNLG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAI+NFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAILNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPDG 500
           SDETHILQTLREELLKIYSPTNACYSVNKVEEPT QVD LELCSDNGKLSM+LEH S DG
Sbjct: 326 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTVQVDSLELCSDNGKLSMLLEHFSSDG 385

Query: 501 A-------------DDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         DDDSF KI+NVEQS H+TE+LNSD EEN TRKDFALR H  KKAD 
Sbjct: 386 GDLRDASSHQPKTDDDDSFNKIKNVEQSPHSTEMLNSDDEENATRKDFALRTHGTKKADV 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
            L DHDQHK++YLS+KKGV VT  SP ++ +GT+TSRVQSSLDKFVTINKRK ET SAPL
Sbjct: 446 PLNDHDQHKRTYLSNKKGVHVTPFSPLLSVTGTDTSRVQSSLDKFVTINKRKSETLSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVPV RNQFLNNQWKK+C D  SKD++CTNGN QVF+DF VGNDED SIQ KTDRV+SK
Sbjct: 506 SEVPVLRNQFLNNQWKKTCPDIASKDIECTNGNFQVFDDFVVGNDEDGSIQFKTDRVVSK 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           + LP SSADHSDDGEATEECTGE  AKVH SVIESTA+PTK+L +MSEDLPL GCS+ PS
Sbjct: 566 VYLPPSSADHSDDGEATEECTGEAVAKVHSSVIESTASPTKDLAMMSEDLPLPGCSIQPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSPQLKLCST HFDFHELKKRR QRQLR+KLNGYTCER KLK HYAAATLKLSQ
Sbjct: 626 GFLKESSSPQLKLCSTFHFDFHELKKRRFQRQLRFKLNGYTCERKKLKCHYAAATLKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
            DNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDL +         
Sbjct: 686 TDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPL LELSAEEEVVVSIHMDV RKNGFTIEEDP +LPGNRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPRSLPGNRFR 805

[Close]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match: A0A6J1GQV6 (DNA mismatch repair protein PMS1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456643 PE=3 SV=1)

HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 687/827 (83.07%), Postives = 718/827 (86.82%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATS+EI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSVEISLKDYGEEWFQVIDNGSGISPTNFRVLALRHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLG LTVETRTKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVETRTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGM TF CLESVSILLSDDCKVEGFVSKSGQGSGRNLG
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVSILLSDDCKVEGFVSKSGQGSGRNLG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPD- 500
           SDETHILQ LREELLKIYSP NAC+SVNKVEEPT+QVD +ELCSD  KLSM++EH SPD 
Sbjct: 326 SDETHILQRLREELLKIYSPINACFSVNKVEEPTKQVDSVELCSDKRKLSMLVEHFSPDE 385

Query: 501 ------------GADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         +DDS K IENVEQSS T EV++SDGEENITRKDFALR+H MKKADA
Sbjct: 386 GKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVVSSDGEENITRKDFALRVHGMKKADA 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
            LKD+DQHKK+  SSKKG Q+T SSPCVT +GTNTSRVQSSLDKFVT NKRKYET SAPL
Sbjct: 446 FLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNTSRVQSSLDKFVTTNKRKYETLSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVP+ RNQFLNNQWKK  AD PSKDVKCT+GNCQVF+DFS GNDEDSSIQ  TDRV ++
Sbjct: 506 SEVPILRNQFLNNQWKKISADNPSKDVKCTHGNCQVFDDFSEGNDEDSSIQTNTDRVFNE 565

Query: 681 LRLPLSSADHSDDGEATEECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLPS 740
           L +PLSSADHSDDGE TEECT E  AKV  SVIEST TP K+LE MSEDLPLS  SVLPS
Sbjct: 566 LGIPLSSADHSDDGETTEECTEEAIAKVPHSVIESTGTPIKDLE-MSEDLPLSDSSVLPS 625

Query: 741 GSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLSQ 800
           G +KESSSPQLKLCST HFDFHELKKRR QRQLR KLNGY CER KLK HYAAATLKLSQ
Sbjct: 626 GFMKESSSPQLKLCSTCHFDFHELKKRRTQRQLRDKLNGYICERKKLKCHYAAATLKLSQ 685

Query: 801 PDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL--------- 860
           PDNEDRKARALEAAA+ELDRLFRK+DFSRMKV+GQFNLGFIIGKLDQDL +         
Sbjct: 686 PDNEDRKARALEAAAKELDRLFRKEDFSRMKVVGQFNLGFIIGKLDQDLFIVDQHAADEK 745

Query: 861 ----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRFR 909
                           L+RPLRLELSAEEEVVVSIHMDVIRKNGF +EEDPHALPGNRFR
Sbjct: 746 YNFERLSQSTILNQQPLLRPLRLELSAEEEVVVSIHMDVIRKNGFVLEEDPHALPGNRFR 805

[Close]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match: A0A6J1GQS5 (DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456643 PE=3 SV=1)

HSP 1 Score: 1284.2 bits (3322), Expect = 0.0e+00
Identity = 687/828 (82.97%), Postives = 718/828 (86.71%), Query Frame = 0 

Query: 141 GQVILDLSSAVKELVENSLDAGATSIEIALKDYGEEWFQVIDNGSGISPTNFR------- 200
           GQVILDLSSAVKELVENSLDAGATS+EI+LKDYGEEWFQVIDNGSGISPTNFR       
Sbjct: 26  GQVILDLSSAVKELVENSLDAGATSVEISLKDYGEEWFQVIDNGSGISPTNFRVLALRHH 85

Query: 201 -----------SLTTYGFRGEALSSLCSLGTLTVETRTKNESVATHLTFDHSGLLVAEKK 260
                      SLTTYGFRGEALSSLCSLG LTVETRTKNESVATHLTFDHSGLLVAEKK
Sbjct: 86  TSKLSDFPDLQSLTTYGFRGEALSSLCSLGNLTVETRTKNESVATHLTFDHSGLLVAEKK 145

Query: 261 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 320
           TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK
Sbjct: 146 TARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKLISLLNAYAVIARGVRFVCTNSAGK 205

Query: 321 NAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSILLSDDCKVEGFVSKSGQGSGRNLG 380
           NAKSVVFKTQGSGSIKDNIITVFGM TF CLESVSILLSDDCKVEGFVSKSGQGSGRNLG
Sbjct: 206 NAKSVVFKTQGSGSIKDNIITVFGMTTFNCLESVSILLSDDCKVEGFVSKSGQGSGRNLG 265

Query: 381 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 440
           DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF
Sbjct: 266 DRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIAIMNFTLPSKACDVNVTPDKRKIFF 325

Query: 441 SDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQVDDLELCSDNGKLSMVLEHLSPD- 500
           SDETHILQ LREELLKIYSP NAC+SVNKVEEPT+QVD +ELCSD  KLSM++EH SPD 
Sbjct: 326 SDETHILQRLREELLKIYSPINACFSVNKVEEPTKQVDSVELCSDKRKLSMLVEHFSPDE 385

Query: 501 ------------GADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFALRMHVMKKADA 560
                         +DDS K IENVEQSS T EV++SDGEENITRKDFALR+H MKKADA
Sbjct: 386 GKLRDASSHLTLADNDDSLKMIENVEQSSQTIEVVSSDGEENITRKDFALRVHGMKKADA 445

Query: 561 LLKDHDQHKKSYLSSKKGVQVTSSSPCVTDSGTNTSRVQSSLDKFVTINKRKYETSSAPL 620
            LKD+DQHKK+  SSKKG Q+T SSPCVT +GTNTSRVQSSLDKFVT NKRKYET SAPL
Sbjct: 446 FLKDYDQHKKTCFSSKKGEQITPSSPCVTVTGTNTSRVQSSLDKFVTTNKRKYETLSAPL 505

Query: 621 SEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGNDEDSSIQIKTDRVLSK 680
           SEVP+ RNQFLNNQWKK  AD PSKDVKCT+GNCQVF+DFS GNDEDSSIQ  TDRV ++
Sbjct: 506 SEVPILRNQFLNNQWKKISADNPSKDVKCTHGNCQVFDDFSEGNDEDSSIQTNTDRVFNE 565

Query: 681 LRLPLSSADHSDDGEAT-EECTGE--AKVHPSVIESTATPTKELEIMSEDLPLSGCSVLP 740
           L +PLSSADHSDDGE T EECT E  AKV  SVIEST TP K+LE MSEDLPLS  SVLP
Sbjct: 566 LGIPLSSADHSDDGETTEEECTEEAIAKVPHSVIESTGTPIKDLE-MSEDLPLSDSSVLP 625

Query: 741 SGSIKESSSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCER-KLKRHYAAATLKLS 800
           SG +KESSSPQLKLCST HFDFHELKKRR QRQLR KLNGY CER KLK HYAAATLKLS
Sbjct: 626 SGFMKESSSPQLKLCSTCHFDFHELKKRRTQRQLRDKLNGYICERKKLKCHYAAATLKLS 685

Query: 801 QPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLLL-------- 860
           QPDNEDRKARALEAAA+ELDRLFRK+DFSRMKV+GQFNLGFIIGKLDQDL +        
Sbjct: 686 QPDNEDRKARALEAAAKELDRLFRKEDFSRMKVVGQFNLGFIIGKLDQDLFIVDQHAADE 745

Query: 861 -----------------LIRPLRLELSAEEEVVVSIHMDVIRKNGFTIEEDPHALPGNRF 909
                            L+RPLRLELSAEEEVVVSIHMDVIRKNGF +EEDPHALPGNRF
Sbjct: 746 KYNFERLSQSTILNQQPLLRPLRLELSAEEEVVVSIHMDVIRKNGFVLEEDPHALPGNRF 805

[Close]
BLAST of Clc09G06330 vs. TAIR 10
Match: AT4G02460.1 (DNA mismatch repair protein, putative )

HSP 1 Score: 728.4 bits (1879), Expect = 7.2e-210
Identity = 433/845 (51.24%), Postives = 558/845 (66.04%), Query Frame = 0 

Query: 117 PSGSTTTTGLQWDLNDTEMKFGALGQVILDLSSAVKELVENSLDAGATSIEIALKDYGEE 176
           PS +TT++ L   +N   +     GQVILDLSSAVKELVENSLDAGATSIEI L+DYGE+
Sbjct: 7   PSPTTTSSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGED 66

Query: 177 WFQVIDNGSGISPTNFR------------------SLTTYGFRGEALSSLCSLGTLTVET 236
           +FQVIDNG GISPTNF+                  +LTTYGFRGEALSSLC+LG LTVET
Sbjct: 67  YFQVIDNGCGISPTNFKVLALKHHTSKLEDFTDLLNLTTYGFRGEALSSLCALGNLTVET 126

Query: 237 RTKNESVATHLTFDHSGLLVAEKKTARQVGTTVMVKKLFSNLPVRSKEFSRNIRKEYGKL 296
           RTKNE VAT LTFDHSGLL AEKKTARQ+GTTV V+KLFSNLPVRSKEF RNIRKEYGKL
Sbjct: 127 RTKNEPVATLLTFDHSGLLTAEKKTARQIGTTVTVRKLFSNLPVRSKEFKRNIRKEYGKL 186

Query: 297 ISLLNAYAVIARGVRFVCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFICLESVSI 356
           +SLLNAYA+IA+GVRFVC+N+ GKN KSVV  TQG GS+KDNIITVFG++TF  L+ VSI
Sbjct: 187 VSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPVSI 246

Query: 357 LLSDDCKVEGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYPIA 416
            +S+DC+VEGF+SK GQG+GRNL DRQ+FF+N RPVDMPKVSKLVNELYK  +SR+YP+ 
Sbjct: 247 CVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYPVT 306

Query: 417 IMNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPTEQ 476
           I++F +P  ACD+NVTPDKRK+FFSDET ++ +LRE L +IYS +NA Y VN+ EE +EQ
Sbjct: 307 ILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENSEQ 366

Query: 477 VDDLELCSDNGKLSMVLEHLSPDGADDDSFKKIENVEQSSHTTEVLNSDGEENITRKDFA 536
            D   + S   K +++ E +  D +        E +E+ + +   +  D    + +  F 
Sbjct: 367 PDKAGVSSFQKKSNLLSEGIVLDVSSKTRLG--EAIEKENPSLREVEIDNSSPMEKFKFE 426

Query: 537 LRMHVMKKADALLKDHDQHKKSYLSSKKGVQVTSSSPCVTDS----GTNTSRVQSSLDKF 596
           ++    KK +  L  HD        S KG+   + +  VTD+     + +S  QS+L+ F
Sbjct: 427 IKACGTKKGEGSLSVHDVTHLDKTPS-KGLPQLNVTEKVTDASKDLSSRSSFAQSTLNTF 486

Query: 597 VTINKRKYETSSAPLSEVPVFRNQFLNNQWKKSCADKPSKDVKCTNGNCQVFNDFSVGND 656
           VT+ KRK+E  S  LSE PV RNQ  + + +KS  +  +   +C     Q+  D  V + 
Sbjct: 487 VTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFEVRALASRCLVEGDQL--DDMVISK 546

Query: 657 EDSSIQIKTDRVLSKLRLPLSSADHSDDGEATEECTGEAKVHPSVIESTATPTKELEIMS 716
           ED +   + D  L     P + AD+ +  E   E     +      ++T T   ++E +S
Sbjct: 547 EDMT-PSERDSELGNRISPGTQADNVERHEREHE--KPIRFEEPTSDNTLT-KGDVERVS 606

Query: 717 EDLPLSGCSVLPSGSIKES--SSPQLKLCSTLHFDFHELKKRRLQRQLRYKLNGYTCE-- 776
           ED P     +    ++ +S   S   K+ STL F F  L+ RRL+R  R +  GY  +  
Sbjct: 607 EDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLSRLQSTGYVSKCM 666

Query: 777 --RKLKRHYAAATLKLSQPDNEDRKARALEAAARELDRLFRKKDFSRMKVIGQFNLGFII 836
              + K+ +AAATL+LSQPD+E+RKARAL AA  EL+RLFRK+DF RM+V+GQFNLGFII
Sbjct: 667 NTPQPKKCFAAATLELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFII 726

Query: 837 GKLDQDLLL-------------------------LIRPLRLELSAEEEVVVSIHMDVIRK 896
            KL++DL +                         L++PL LELS EEEV V +HMD+IR+
Sbjct: 727 AKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMDIIRE 786

Query: 897 NGFTIEEDPHALPGNRFRLKAVPFSKNITFGVEDVKDLISTLADSEGECSIIGSYRMDTA 909
           NGF +EE+P A PG  FRL+A+P+SKNITFGVED+KDLISTL D+ GECS+  SY+    
Sbjct: 787 NGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGECSVASSYKTSKT 842

[Close]
BLAST of Clc09G06330 vs. TAIR 10
Match: AT1G02880.1 (thiamin pyrophosphokinase1 )

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-51
Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 0 

Query: 8   DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
           D ++  GTK+ DES DQDTTDL KC+ YI  S  NQE S L IL  GALGGRFDHE GN+
Sbjct: 27  DFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGLQILATGALGGRFDHEAGNL 86

Query: 68  NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
           NVL R+  TRI+LLSDDCL+ LLP+TH HEIH++SS+EGPHCGLIPIG PS  TTT+GLQ
Sbjct: 87  NVLYRYPDTRIVLLSDDCLIQLLPKTHRHEIHIQSSLEGPHCGLIPIGTPSAKTTTSGLQ 146

Query: 128 WDLNDTEMKFGALGQVILDLSSAVKE 154
           WDL++TEM+FG L    +  S+ VKE
Sbjct: 147 WDLSNTEMRFGGL----ISTSNLVKE 168

[Close]
BLAST of Clc09G06330 vs. TAIR 10
Match: AT1G02880.2 (thiamin pyrophosphokinase1 )

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-51
Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 0 

Query: 8   DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
           D ++  GTK+ DES DQDTTDL KC+ YI  S  NQE S L IL  GALGGRFDHE GN+
Sbjct: 94  DFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGLQILATGALGGRFDHEAGNL 153

Query: 68  NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
           NVL R+  TRI+LLSDDCL+ LLP+TH HEIH++SS+EGPHCGLIPIG PS  TTT+GLQ
Sbjct: 154 NVLYRYPDTRIVLLSDDCLIQLLPKTHRHEIHIQSSLEGPHCGLIPIGTPSAKTTTSGLQ 213

Query: 128 WDLNDTEMKFGALGQVILDLSSAVKE 154
           WDL++TEM+FG L    +  S+ VKE
Sbjct: 214 WDLSNTEMRFGGL----ISTSNLVKE 235

[Close]
BLAST of Clc09G06330 vs. TAIR 10
Match: AT1G02880.3 (thiamin pyrophosphokinase1 )

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-51
Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 0 

Query: 8   DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
           D ++  GTK+ DES DQDTTDL KC+ YI  S  NQE S L IL  GALGGRFDHE GN+
Sbjct: 97  DFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGLQILATGALGGRFDHEAGNL 156

Query: 68  NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
           NVL R+  TRI+LLSDDCL+ LLP+TH HEIH++SS+EGPHCGLIPIG PS  TTT+GLQ
Sbjct: 157 NVLYRYPDTRIVLLSDDCLIQLLPKTHRHEIHIQSSLEGPHCGLIPIGTPSAKTTTSGLQ 216

Query: 128 WDLNDTEMKFGALGQVILDLSSAVKE 154
           WDL++TEM+FG L    +  S+ VKE
Sbjct: 217 WDLSNTEMRFGGL----ISTSNLVKE 238

[Close]
BLAST of Clc09G06330 vs. TAIR 10
Match: AT1G02880.4 (thiamin pyrophosphokinase1 )

HSP 1 Score: 200.3 bits (508), Expect = 6.8e-51
Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 0 

Query: 8   DIHMMQGTKIFDESEDQDTTDLHKCVAYILQSMPNQEESDLCILVAGALGGRFDHEIGNI 67
           D ++  GTK+ DES DQDTTDL KC+ YI  S  NQE S L IL  GALGGRFDHE GN+
Sbjct: 10  DFYINLGTKVIDESHDQDTTDLDKCILYIRHSTLNQETSGLQILATGALGGRFDHEAGNL 69

Query: 68  NVLCRFSTTRIILLSDDCLVHLLPRTHHHEIHVRSSVEGPHCGLIPIGMPSGSTTTTGLQ 127
           NVL R+  TRI+LLSDDCL+ LLP+TH HEIH++SS+EGPHCGLIPIG PS  TTT+GLQ
Sbjct: 70  NVLYRYPDTRIVLLSDDCLIQLLPKTHRHEIHIQSSLEGPHCGLIPIGTPSAKTTTSGLQ 129

Query: 128 WDLNDTEMKFGALGQVILDLSSAVKE 154
           WDL++TEM+FG L    +  S+ VKE
Sbjct: 130 WDLSNTEMRFGGL----ISTSNLVKE 151

The following BLAST results are available for this feature:
BLAST of Clc09G06330 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0068005.10.0e+0080.69DNA mismatch repair protein PMS1 [Cucumis melo var. makuwa] >TYK18122.1 DNA mism... [more]
KAG6575837.10.0e+0079.82ATPase family AAA domain-containing protein 1, partial [Cucurbita argyrosperma s... [more]
XP_038899185.10.0e+0086.46DNA mismatch repair protein PMS1 isoform X1 [Benincasa hispida][more]
XP_008451591.10.0e+0084.16PREDICTED: DNA mismatch repair protein PMS1 [Cucumis melo][more]
XP_011659356.10.0e+0083.31DNA mismatch repair protein PMS1 [Cucumis sativus] >KGN44927.1 hypothetical prot... [more]
BLAST of Clc09G06330 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q941I61.0e-20851.24DNA mismatch repair protein PMS1 OS=Arabidopsis thaliana OX=3702 GN=PMS1 PE=1 SV... [more]
P542783.6e-8933.01Mismatch repair endonuclease PMS2 OS=Homo sapiens OX=9606 GN=PMS2 PE=1 SV=2[more]
F1NQJ33.9e-8330.88Mismatch repair endonuclease PMS2 OS=Gallus gallus OX=9031 GN=PMS2 PE=2 SV=3[more]
Q54QA09.8e-7928.31Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum OX=44689 GN=pms1 P... [more]
P542795.2e-7229.72Mismatch repair endonuclease PMS2 OS=Mus musculus OX=10090 GN=Pms2 PE=2 SV=1[more]
BLAST of Clc09G06330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D2J30.0e+0080.69Thiamine diphosphokinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3BSM90.0e+0084.16DNA mismatch repair protein PMS1 OS=Cucumis melo OX=3656 GN=LOC103492825 PE=3 SV... [more]
A0A0A0K9760.0e+0083.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396420 PE=3 SV=1[more]
A0A6J1GQV60.0e+0083.07DNA mismatch repair protein PMS1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1GQS50.0e+0082.97DNA mismatch repair protein PMS1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of Clc09G06330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G02460.17.2e-21051.24DNA mismatch repair protein, putative [more]
AT1G02880.16.8e-5165.07thiamin pyrophosphokinase1 [more]
AT1G02880.26.8e-5165.07thiamin pyrophosphokinase1 [more]
AT1G02880.36.8e-5165.07thiamin pyrophosphokinase1 [more]
AT1G02880.46.8e-5165.07thiamin pyrophosphokinase1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013507DNA mismatch repair protein, S5 domain 2-likeSMARTSM01340DNA_mis_repair_2coord: 321..441
e-value: 4.8E-36
score: 135.7
IPR013507DNA mismatch repair protein, S5 domain 2-likePFAMPF01119DNA_mis_repaircoord: 322..440
e-value: 2.3E-25
score: 88.6
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 145..325
e-value: 7.2E-57
score: 194.2
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 141..324
IPR007371Thiamin pyrophosphokinase, catalytic domainPFAMPF04263TPK_catalyticcoord: 13..78
e-value: 8.6E-17
score: 61.3
IPR014790MutL, C-terminal, dimerisationPFAMPF08676MutL_Ccoord: 818..890
e-value: 2.5E-10
score: 40.3
NoneNo IPR availablePFAMPF13589HATPase_c_3coord: 148..194
e-value: 4.8E-9
score: 36.3
NoneNo IPR availablePANTHERPTHR10073:SF52MISMATCH REPAIR ENDONUCLEASE PMS2-RELATEDcoord: 141..910
NoneNo IPR availableCDDcd16926HATPase_MutL-MLH-PMS-likecoord: 139..298
e-value: 1.30726E-64
score: 213.452
NoneNo IPR availableCDDcd03484MutL_Trans_hPMS_2_likecoord: 316..441
e-value: 1.38262E-52
score: 178.229
IPR036759Thiamin pyrophosphokinase, catalytic domain superfamilyGENE3D3.40.50.10240Thiamin pyrophosphokinase, catalytic domaincoord: 6..144
e-value: 1.7E-35
score: 124.3
IPR036759Thiamin pyrophosphokinase, catalytic domain superfamilySUPERFAMILY63999Thiamin pyrophosphokinase, catalytic domaincoord: 13..86
IPR006282Thiamin pyrophosphokinaseTIGRFAMTIGR01378TIGR01378coord: 11..139
e-value: 1.2E-28
score: 97.9
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 334..445
e-value: 2.2E-35
score: 123.3
IPR007373Thiamin pyrophosphokinase, thiamin-binding domainPFAMPF04265TPK_B1_bindingcoord: 95..140
e-value: 2.7E-12
score: 46.2
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 141..910
IPR014762DNA mismatch repair, conserved sitePROSITEPS00058DNA_MISMATCH_REPAIR_1coord: 199..205
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 304..440
IPR036371Thiamin pyrophosphokinase, thiamin-binding domain superfamilySUPERFAMILY63862Thiamin pyrophosphokinase, substrate-binding domaincoord: 89..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G06330.1Clc09G06330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006298 mismatch repair
biological_process GO:0016310 phosphorylation
biological_process GO:0009229 thiamine diphosphate biosynthetic process
biological_process GO:0006772 thiamine metabolic process
cellular_component GO:0032389 MutLalpha complex
cellular_component GO:0032300 mismatch repair complex
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0030983 mismatched DNA binding
molecular_function GO:0030975 thiamine binding
molecular_function GO:0004788 thiamine diphosphokinase activity