Clc09G06320 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G06320
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	CS domain-containing protein
Location	ClcChr09: 4899233 .. 4901907 (+)
RNA-Seq Expression	Clc09G06320
Synteny	Clc09G06320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

tatgagcccatgaagattgaatggaagccgaattcaaaacaaaattgaaaagttagcattcaaaggagtgagggagattgtagctagaaagtactagaaccctcatttgcccttcttttatttccaacaactcataccgcccacttggcttatcttctgactttagggtttctgtttcttctcccctcttccttgcatttctctagggtttttcactttcccccatcatctttgtataatccgaagcaatgaggtaaattactgctctctttctctctctttcgaccttgatttttccgtagattgcatttttttgggtgtcttttttcatcggtgattttgtgatcttcattttccccaactttacttctccaactgtactgggctgtgccaaatttattagatcattgtagattcgttgttgattttctctcttttactttgggtattgggaatcggagtctatcttgtgagttgctgggtagaaatgtcttaccaaacggtgttttttccccctaattgaagttgttttcgggcttggaatcaaggcttggttggttttgggctgagaattgtgggaatatcatggtggtttatttagggtttttagaagttcctgtttttcttagttgggagggttgtaagttttcattctggggtcatccatgttttttttttttgttgttgatatttcttctcgtgtgcagtcttttctccaagggtcccaggattatttgtcaaatcatatatatattcgggttgctaattcaagttttctgttggcatcatgtactgtacagttggtgggcatgcgtttttgtttttaacttataggggcttgaaataagtctttaggttgttgggtcaacatgaagctgagacttgttgctatggtgttattatattgcaagtcaacttggtcaactcaggcctttttttttttttagctgaattttatttccaacagcgtcttggcttgtcgtttcaacttttgagtaggtggctgggtctttgaattcattctgttggatgatatatggactcataatcgcgatttagttaaatccatacttttgaggatttcctatatgagcatactaccttttaaggatttcctatatgaacataccttttgagactgttacaatttatttatgcatctacgattactgttaacatttgtttattaaaatgtagtcgtcatcctgaggtgaaatgggcccagagactggacaaggtctttatcactgtacaacttcccgactcaaaggattctaaggttaatcttgagccggatggagtattcactttctctggcagtgctggttcagagaatcaccattatgaactgaagttggagcttttcgataaagttaatgttgaggtgtgtagacattacttctgtcataatcacatcttttccatttagagtatgttttgtataatgaaatggaccctgttgtttgcatctaatttctagtcatcaggataatttgaagaaatatatgatatactgttatatggattttttgttcataacaggaaagtaaagttaacattggagttcggagcatattctgtatcctagaaaaggcagagaagggatggtggaaaaagctattgcgtggagatggaaagccaccccactatgtcaaagtagattgggacaaatgggtggatgaggacgaagataatggtagcctaattcttccttaagttgttgggtttttactatgtattatatttttcatcctgatgtgtattgatgatcttttggttgttcaggaactgctggtctaggtgacttggatttgggaggcatggacttttcggtaaggacgtgttagttgaactggttgctttattctatatcttgttctaatcaatattttgtcttgcagaaatttggcggtatgggtggcatgggtgacatggacatgggagacatgggagatatgggagatgataatgactccgacgagagtgatgatgatggtaagttcccattttacttaagcaatgcagaatgctttttattattgtgcctgaggtctggcaattggatctgacgtggctgagttatataggcaactgaaatattgtctgacagtatttctcgaccacactgttcactctttgtaactcgtttgctaaatttggctgaagggattgattaactgttttgtgttaatgatattctgttatattttgtagaacaagaggtgtcaaagcccgaaaaaagtgacatggctgaatctgcgaaaccggaggctgaaatcaaaggtggagttgggtcctcagaagagaaaaaggaagctgcagctagcacatgattttgcggggttcataaataaccaagcatttgataatgttttcatagttgtggcttgaatttttgagcttttatgatgtggcctatttcaatgtgtatttctctggaactgctatttttgaactgcttaaatctttgcaatccaggaaaagtattaatttcactagtttatagaatgcattaagaatgagttgaactgagctgtgtattggcttttctcagattatgatacggattgcttagagattgttctttcttttgctgacaaatttatgagatttagtaatatggagaattcaatggttcggttggctgtgaaaattacctaggaaatgagggatgg

mRNA sequence

tatgagcccatgaagattgaatggaagccgaattcaaaacaaaattgaaaagttagcattcaaaggagtgagggagattgtagctagaaagtactagaaccctcatttgcccttcttttatttccaacaactcataccgcccacttggcttatcttctgactttagggtttctgtttcttctcccctcttccttgcatttctctagggtttttcactttcccccatcatctttgtataatccgaagcaatgagtcgtcatcctgaggtgaaatgggcccagagactggacaaggtctttatcactgtacaacttcccgactcaaaggattctaaggttaatcttgagccggatggagtattcactttctctggcagtgctggttcagagaatcaccattatgaactgaagttggagcttttcgataaagttaatgttgaggaaagtaaagttaacattggagttcggagcatattctgtatcctagaaaaggcagagaagggatggtggaaaaagctattgcgtggagatggaaagccaccccactatgtcaaagtagattgggacaaatgggtggatgaggacgaagataatggaactgctggtctaggtgacttggatttgggaggcatggacttttcgaaatttggcggtatgggtggcatgggtgacatggacatgggagacatgggagatatgggagatgataatgactccgacgagagtgatgatgatgaacaagaggtgtcaaagcccgaaaaaagtgacatggctgaatctgcgaaaccggaggctgaaatcaaaggtggagttgggtcctcagaagagaaaaaggaagctgcagctagcacatgattttgcggggttcataaataaccaagcatttgataatgttttcatagttgtggcttgaatttttgagcttttatgatgtggcctatttcaatgtgtatttctctggaactgctatttttgaactgcttaaatctttgcaatccaggaaaagtattaatttcactagtttatagaatgcattaagaatgagttgaactgagctgtgtattggcttttctcagattatgatacggattgcttagagattgttctttcttttgctgacaaatttatgagatttagtaatatggagaattcaatggttcggttggctgtgaaaattacctaggaaatgagggatgg

Coding sequence (CDS)

atgagtcgtcatcctgaggtgaaatgggcccagagactggacaaggtctttatcactgtacaacttcccgactcaaaggattctaaggttaatcttgagccggatggagtattcactttctctggcagtgctggttcagagaatcaccattatgaactgaagttggagcttttcgataaagttaatgttgaggaaagtaaagttaacattggagttcggagcatattctgtatcctagaaaaggcagagaagggatggtggaaaaagctattgcgtggagatggaaagccaccccactatgtcaaagtagattgggacaaatgggtggatgaggacgaagataatggaactgctggtctaggtgacttggatttgggaggcatggacttttcgaaatttggcggtatgggtggcatgggtgacatggacatgggagacatgggagatatgggagatgataatgactccgacgagagtgatgatgatgaacaagaggtgtcaaagcccgaaaaaagtgacatggctgaatctgcgaaaccggaggctgaaatcaaaggtggagttgggtcctcagaagagaaaaaggaagctgcagctagcacatga

Protein sequence

MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDKVNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGLGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKPEAEIKGGVGSSEEKKEAAAST

Homology

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BLAST of Clc09G06320 vs. NCBI nr
Match: XP_038896727.1 (uncharacterized protein OsI_027940 [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 1.7e-102
Identity = 197/201 (98.01%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKP 180
           GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS   E+AKP
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS---EAAKP 180

Query: 181 EAEIKGGVGSSEEKKEAAAST 202
           EAEIKGGVGSSEEKKEAAAST
Sbjct: 181 EAEIKGGVGSSEEKKEAAAST 198

[Close]

BLAST of Clc09G06320 vs. NCBI nr
Match: XP_008451590.1 (PREDICTED: uncharacterized protein OsI_027940 [Cucumis melo])

HSP 1 Score: 381.7 bits (979), Expect = 3.9e-102
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS-DMAESAK 180
           GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDEQEVSKPEKS D  ESAK
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDEQEVSKPEKSGDKVESAK 180

Query: 181 PEAEIKGGVGSSEEKKEAAAST 202
           PE EIKGGVGSSEEKKEAAAST
Sbjct: 181 PEGEIKGGVGSSEEKKEAAAST 202

[Close]

BLAST of Clc09G06320 vs. NCBI nr
Match: KAA0068004.1 (HSP20-like chaperones superfamily protein isoform 3 [Cucumis melo var. makuwa])

HSP 1 Score: 377.1 bits (967), Expect = 9.5e-101
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNG-TAG 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+G TAG
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGRTAG 120

Query: 121 LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS-DMAESA 180
           LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDEQEVSKPEKS D  ESA
Sbjct: 121 LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDEQEVSKPEKSGDKVESA 180

Query: 181 KPEAEIKGGVGSSEEKKEAAAST 202
           KPE EIKGGVGSSEEKKEAAAST
Sbjct: 181 KPEGEIKGGVGSSEEKKEAAAST 203

[Close]

BLAST of Clc09G06320 vs. NCBI nr
Match: XP_004136034.1 (uncharacterized protein OsI_027940 [Cucumis sativus] >KGN44928.1 hypothetical protein Csa_016072 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 4.0e-99
Identity = 195/210 (92.86%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKF---------GGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEK 180
           GDLDLGGMDFSKF         GGMGGMGDMDMGDMGD+GDDNDSDESDDDEQEVSKPEK
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGGMGGMGGMGDMDMGDMGDIGDDNDSDESDDDEQEVSKPEK 180

Query: 181 SDMAESAKPEAEIKGGVGSSEEKKEAAAST 202
           S   ESAKPE EIKGGVGSSEEKKEAAAST
Sbjct: 181 S--GESAKPEGEIKGGVGSSEEKKEAAAST 208

[Close]

BLAST of Clc09G06320 vs. NCBI nr
Match: TYK18123.1 (HSP20-like chaperones superfamily protein isoform 3 [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 8.3e-97
Identity = 187/201 (93.03%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKP 180
           GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDE      +  D  ESAKP
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDE------KSGDKVESAKP 180

Query: 181 EAEIKGGVGSSEEKKEAAAST 202
           E EIKGGVGSSEEKKEAAAST
Sbjct: 181 EGEIKGGVGSSEEKKEAAAST 195

[Close]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot
Match: P0C8Z0 (Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_027940 PE=1 SV=2)

HSP 1 Score: 217.2 bits (552), Expect = 1.6e-55
Identity = 118/207 (57.00%), Postives = 146/207 (70.53%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQR+DKV+ITVQL D+KD+KVNLEP+GVF+FS +AG++ + YE KLEL DK
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESK+++GVRSIFCI+EKAE  WWKKL+R D K PH+VKVDWDKWVDED+D      
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDM------------------------DMGDMGDMGDDNDS 180
            D+++ GMDFS FGGMGGMG M                         MG MG MG  ++ 
Sbjct: 121 ADVNVDGMDFSNFGGMGGMGGMGGMGDMMGGMGGMGGMGGMAEMMGGMGGMGGMGGMDEF 180

Query: 181 DESDDDEQEVSKPEKSDMAESAKPEAE 184
           ++  DDE+EVSKP+ ++ A  A    E
Sbjct: 181 EDESDDEEEVSKPQDAEKAAEAGKSQE 202

[Close]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot
Match: Q6YYB0 (Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0359500 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.7e-55
Identity = 118/210 (56.19%), Postives = 146/210 (69.52%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQR+DKV+ITVQL D+KD+KVNLEP+GVF+FS +AG++ + YE KLEL DK
Sbjct: 1   MSRHPEVKWAQRIDKVYITVQLADAKDAKVNLEPEGVFSFSATAGTDGNLYESKLELNDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESK+++GVRSIFCI+EKAE  WWKKL+R D K PH+VKVDWDKWVDED+D      
Sbjct: 61  VNVEESKISVGVRSIFCIVEKAEAKWWKKLVRDDQKAPHFVKVDWDKWVDEDDDG----- 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDM---------------------------DMGDMGDMGDD 180
            D+++ GMDFS FGGMGGMG M                            MG MG MG  
Sbjct: 121 ADVNVDGMDFSNFGGMGGMGGMGGMGDMMGGMGGMGGMGGMAEMMGGMGGMGGMGGMGGM 180

Query: 181 NDSDESDDDEQEVSKPEKSDMAESAKPEAE 184
           ++ ++  DDE+EVSKP+ ++ A  A    E
Sbjct: 181 DEFEDESDDEEEVSKPQDAEKAAEAGKSQE 205

[Close]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot
Match: Q8L7U4 (Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.2e-47
Identity = 123/245 (50.20%), Postives = 145/245 (59.18%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWA+  +K+F+TV L D+KD+KVNL+P+GVF FS   G ENH YELKLEL DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESK+NIG RSIFCI+EKAE   W KLLR   KPPHYVKVDWDKWVDED D G+AG 
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRVK-KPPHYVKVDWDKWVDED-DEGSAGA 120

Query: 121 GDLDLG------------------------------GMDFSK-FGGMGGMGDM------- 180
            D+D+                               GMDFSK  GGMGGMG M       
Sbjct: 121 ADMDMAGMEGMGGMGGMGGMGGMGGMGGMGGMGGMEGMDFSKLMGGMGGMGGMGGLEGLG 180

Query: 181 ------DMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKPEAEIKGGVGSSEEKKE 202
                  MG MG MG   + ++SDD+E+     +K D  ++ K E       G + EK  
Sbjct: 181 GMGGMGGMGGMGGMGGMEEFEDSDDEEETAKSGDKKD--DAVKEE-------GLATEKAP 234

[Close]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot
Match: Q9FR62 (Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.2e-35
Identity = 82/181 (45.30%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHP VKWAQR D V+ITV+LPD++D K+ LEP+G F FS ++G+    YE+ L+L D 
Sbjct: 1   MSRHPTVKWAQRSDWVYITVELPDAEDVKLKLEPEGKFFFSATSGASKTLYEVDLDLLDS 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           V+V ESK ++  RS+F +++KAE  WW +L + +GK P Y+KVDWDKWVDED D    G 
Sbjct: 61  VDVNESKASVSSRSVFYLVKKAESKWWNRLTKPEGKHPLYLKVDWDKWVDED-DEDKGGE 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKP 180
           GD+D G  DF+          ++MGD  ++G++  ++E  D E E +   K    +  K 
Sbjct: 121 GDMDFGDFDFN---------GLNMGDTDEIGEE-VAEEDGDGEGETAAETKEKKIDGEKD 170

Query: 181 E 182
           E
Sbjct: 181 E 170

[Close]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot
Match: Q6ID70 (Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSR+PEV WAQR DKV++TV LPD+KD  V  EP G+F+FS + G++   +E  LEL+ K
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFS-ALGAQGERFEFSLELYGK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED 115
           +  E  K N+G+R+I   ++K E+ WW +LL+ + KP  Y+KVDW+KW DEDE+
Sbjct: 61  IMTEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112

[Close]

BLAST of Clc09G06320 vs. ExPASy TrEMBL
Match: A0A1S3BRT4 (uncharacterized protein OsI_027940 OS=Cucumis melo OX=3656 GN=LOC103492824 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.9e-102
Identity = 196/202 (97.03%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS-DMAESAK 180
           GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDEQEVSKPEKS D  ESAK
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDEQEVSKPEKSGDKVESAK 180

Query: 181 PEAEIKGGVGSSEEKKEAAAST 202
           PE EIKGGVGSSEEKKEAAAST
Sbjct: 181 PEGEIKGGVGSSEEKKEAAAST 202

[Close]

BLAST of Clc09G06320 vs. ExPASy TrEMBL
Match: A0A5A7VKQ8 (HSP20-like chaperones superfamily protein isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001950 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.6e-101
Identity = 196/203 (96.55%), Postives = 198/203 (97.54%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNG-TAG 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+G TAG
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGRTAG 120

Query: 121 LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKS-DMAESA 180
           LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDEQEVSKPEKS D  ESA
Sbjct: 121 LGDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDEQEVSKPEKSGDKVESA 180

Query: 181 KPEAEIKGGVGSSEEKKEAAAST 202
           KPE EIKGGVGSSEEKKEAAAST
Sbjct: 181 KPEGEIKGGVGSSEEKKEAAAST 203

[Close]

BLAST of Clc09G06320 vs. ExPASy TrEMBL
Match: A0A0A0K620 (CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G396430 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 195/210 (92.86%), Postives = 197/210 (93.81%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKF---------GGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEK 180
           GDLDLGGMDFSKF         GGMGGMGDMDMGDMGD+GDDNDSDESDDDEQEVSKPEK
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGGMGGMGGMGDMDMGDMGDIGDDNDSDESDDDEQEVSKPEK 180

Query: 181 SDMAESAKPEAEIKGGVGSSEEKKEAAAST 202
           S   ESAKPE EIKGGVGSSEEKKEAAAST
Sbjct: 181 S--GESAKPEGEIKGGVGSSEEKKEAAAST 208

[Close]

BLAST of Clc09G06320 vs. ExPASy TrEMBL
Match: A0A5D3D1Q2 (HSP20-like chaperones superfamily protein isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00510 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.0e-97
Identity = 187/201 (93.03%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED+GTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDDGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKP 180
           GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSD+SDDDE      +  D  ESAKP
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMDMGDMGDMGDDNDSDDSDDDE------KSGDKVESAKP 180

Query: 181 EAEIKGGVGSSEEKKEAAAST 202
           E EIKGGVGSSEEKKEAAAST
Sbjct: 181 EGEIKGGVGSSEEKKEAAAST 195

[Close]

BLAST of Clc09G06320 vs. ExPASy TrEMBL
Match: A0A6J1D735 (uncharacterized protein OsI_027940 OS=Momordica charantia OX=3673 GN=LOC111017953 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.6e-96
Identity = 190/204 (93.14%), Postives = 193/204 (94.61%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK
Sbjct: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL
Sbjct: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120

Query: 121 GDLDLGGMDFSKFGGMGGMGD----MDMGDMGDMGDDNDSDESDDDEQEVSKPEKS-DMA 180
           GDLDLGGMDFSKFGGMGGMGD    M MGDMGDMGDDNDSDESDDDEQE+SKPEKS D A
Sbjct: 121 GDLDLGGMDFSKFGGMGGMGDMGMGMGMGDMGDMGDDNDSDESDDDEQEMSKPEKSGDNA 180

Query: 181 ESAKPEAEIK-GGVGSSEEKKEAA 199
           E+AKP   +K GGVGSSEEKKEAA
Sbjct: 181 ETAKPVEVVKEGGVGSSEEKKEAA 204

[Close]

BLAST of Clc09G06320 vs. TAIR 10
Match: AT4G02450.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 9.6e-51
Identity = 107/161 (66.46%), Postives = 121/161 (75.16%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWA+  +K+F+TV L D+KD+KVNL+P+GVF FS   G ENH YELKLEL DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESK+NIG RSIFCI+EKAE   W KLLR   KPPHYVKVDWDKWVDED D G+AG 
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRVK-KPPHYVKVDWDKWVDED-DEGSAGA 120

Query: 121 GDLDLGGMD-FSKFGGMGGMGDM-DMGDMGDMGDDNDSDES 160
            D+D+ GM+     GGMGGMG M  MG MG MG     D S
Sbjct: 121 ADMDMAGMEGMGGMGGMGGMGGMGGMGGMGGMGGMEGMDFS 159

[Close]

BLAST of Clc09G06320 vs. TAIR 10
Match: AT4G02450.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 5.8e-48
Identity = 123/245 (50.20%), Postives = 145/245 (59.18%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSRHPEVKWA+  +K+F+TV L D+KD+KVNL+P+GVF FS   G ENH YELKLEL DK
Sbjct: 1   MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDEDNGTAGL 120
           VNVEESK+NIG RSIFCI+EKAE   W KLLR   KPPHYVKVDWDKWVDED D G+AG 
Sbjct: 61  VNVEESKINIGERSIFCIIEKAEPERWNKLLRVK-KPPHYVKVDWDKWVDED-DEGSAGA 120

Query: 121 GDLDLG------------------------------GMDFSK-FGGMGGMGDM------- 180
            D+D+                               GMDFSK  GGMGGMG M       
Sbjct: 121 ADMDMAGMEGMGGMGGMGGMGGMGGMGGMGGMGGMEGMDFSKLMGGMGGMGGMGGLEGLG 180

Query: 181 ------DMGDMGDMGDDNDSDESDDDEQEVSKPEKSDMAESAKPEAEIKGGVGSSEEKKE 202
                  MG MG MG   + ++SDD+E+     +K D  ++ K E       G + EK  
Sbjct: 181 GMGGMGGMGGMGGMGGMEEFEDSDDEEETAKSGDKKD--DAVKEE-------GLATEKAP 234

[Close]

BLAST of Clc09G06320 vs. TAIR 10
Match: AT3G03773.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 129.8 bits (325), Expect = 2.5e-30
Identity = 58/114 (50.88%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           MSR+PEV WAQR DKV++TV LPD+KD  V  EP G+F+FS + G++   +E  LEL+ K
Sbjct: 1   MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFS-ALGAQGERFEFSLELYGK 60

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED 115
           +  E  K N+G+R+I   ++K E+ WW +LL+ + KP  Y+KVDW+KW DEDE+
Sbjct: 61  IMTEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 112

[Close]

BLAST of Clc09G06320 vs. TAIR 10
Match: AT3G03773.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29
Identity = 57/114 (50.00%), Postives = 81/114 (71.05%), Query Frame = 0


Query: 1   MSRHPEVKWAQRLDKVFITVQLPDSKDSKVNLEPDGVFTFSGSAGSENHHYELKLELFDK 60
           M R+PEV WAQR DKV++TV LPD+KD  V  EP G+F+FS + G++   +E  LEL+ K
Sbjct: 55  MIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFS-ALGAQGERFEFSLELYGK 114

Query: 61  VNVEESKVNIGVRSIFCILEKAEKGWWKKLLRGDGKPPHYVKVDWDKWVDEDED 115
           +  E  K N+G+R+I   ++K E+ WW +LL+ + KP  Y+KVDW+KW DEDE+
Sbjct: 115 IMTEYRK-NVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEE 166

The following BLAST results are available for this feature:

BLAST of Clc09G06320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896727.1	1.7e-102	98.01	uncharacterized protein OsI_027940 [Benincasa hispida]	[more]
XP_008451590.1	3.9e-102	97.03	PREDICTED: uncharacterized protein OsI_027940 [Cucumis melo]	[more]
KAA0068004.1	9.5e-101	96.55	HSP20-like chaperones superfamily protein isoform 3 [Cucumis melo var. makuwa]	[more]
XP_004136034.1	4.0e-99	92.86	uncharacterized protein OsI_027940 [Cucumis sativus] >KGN44928.1 hypothetical pr...	[more]
TYK18123.1	8.3e-97	93.03	HSP20-like chaperones superfamily protein isoform 3 [Cucumis melo var. makuwa]	[more]

BLAST of Clc09G06320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Z0	1.6e-55	57.00	Uncharacterized protein OsI_027940 OS=Oryza sativa subsp. indica OX=39946 GN=OsI...	[more]
Q6YYB0	3.7e-55	56.19	Uncharacterized protein Os08g0359500 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q8L7U4	8.2e-47	50.20	Co-chaperone protein p23-1 OS=Arabidopsis thaliana OX=3702 GN=P23-1 PE=1 SV=1	[more]
Q9FR62	4.2e-35	45.30	Co-chaperone protein p23-1 OS=Brassica napus OX=3708 GN=P23-1 PE=1 SV=1	[more]
Q6ID70	3.5e-29	50.88	Co-chaperone protein p23-2 OS=Arabidopsis thaliana OX=3702 GN=P23-2 PE=1 SV=1	[more]

BLAST of Clc09G06320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRT4	1.9e-102	97.03	uncharacterized protein OsI_027940 OS=Cucumis melo OX=3656 GN=LOC103492824 PE=4 ...	[more]
A0A5A7VKQ8	4.6e-101	96.55	HSP20-like chaperones superfamily protein isoform 3 OS=Cucumis melo var. makuwa ...	[more]
A0A0A0K620	1.9e-99	92.86	CS domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G396430 PE=4 SV=...	[more]
A0A5D3D1Q2	4.0e-97	93.03	HSP20-like chaperones superfamily protein isoform 3 OS=Cucumis melo var. makuwa ...	[more]
A0A6J1D735	7.6e-96	93.14	uncharacterized protein OsI_027940 OS=Momordica charantia OX=3673 GN=LOC11101795...	[more]

BLAST of Clc09G06320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02450.2	9.6e-51	66.46	HSP20-like chaperones superfamily protein	[more]
AT4G02450.1	5.8e-48	50.20	HSP20-like chaperones superfamily protein	[more]
AT3G03773.1	2.5e-30	50.88	HSP20-like chaperones superfamily protein	[more]
AT3G03773.2	1.2e-29	50.00	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 2..119 e-value: 1.3E-36 score: 127.7
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 1..152
IPR007052	CS domain	PFAM	PF04969	CS	coord: 6..81 e-value: 3.5E-12 score: 47.2
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 2..91 score: 17.73922
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..192
None	No IPR available	PANTHER	PTHR22932	TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE	coord: 1..142
None	No IPR available	PANTHER	PTHR22932:SF16	BNAC05G01500D PROTEIN	coord: 1..142
None	No IPR available	CDD	cd06465	p23_hB-ind1_like	coord: 5..113 e-value: 6.6896E-46 score: 145.43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G06320.1	Clc09G06320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051131	chaperone-mediated protein complex assembly
biological_process	GO:0006457	protein folding
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0051879	Hsp90 protein binding