Clc09G06100 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G06100
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Exopolygalacturonase-like
Location	ClcChr09: 4768762 .. 4772770 (+)
RNA-Seq Expression	Clc09G06100
Synteny	Clc09G06100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGTGAGAATATCACACAAAACTTCAAACATTTAATTTGAATTAATTATCTTTGAACTTAGTAAATTATTTAAATTTGAGCCATTATTTTGCAACTACATCGTACCTTAGCTTGTTGTAGCTCTATCAGCAATTGGGTTTCATTAATTATAATCATTTTAAAGCAATATTTAGATGTATTTTGGATTGACAAAAATAAATAAATAAATAAATAAATTTATTGTTGATTTCCCACGTGGCAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCGTAAGTATAATTCTCTATTACTCGATCACTCCTCATTTAATTCTAAACTACGACCTACGGAAAACGTACTTCAAACTATTAGAATTGCGTCTAATACACACTTGAACTTTGAAAAAAAACATGACTTAATTATAGATCACTCAATATTATAATTGTTATTGATTTATTTTTCTCTTTTTTTTAGTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGGTAATTATTGTATACATTTTTTTTTTGAAAAAGTTCGAAGATTAAGAAACACAACAAGAAAACATCTCATGCTCCTTACCCTTATCTTTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGAAGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGTAATAATAACACAAGAACGACGATGAAAAAAAAAAACTAAATCATATTAATGCTTATTAGTTTAAGCTTTTGAGTTAAGTAGTGGTTTTAACGAAGCCACAACGATTAATACTCCATGCAGGCTTCGAAGTGGAAGATCAGCGACGTTCACTTCAAAAACATTCGCGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTGTATAACATTGATATGTGTATGATGGGAGGGTAATTTTATGCTTTGTGGATTTTTTTATAATGATTCAACACATTGTATTCTCTGTTTTCGAATGATGAATATCCAATGTAAAAATTATTAGTGTTTTATTTTTTCCTCATATTGGGTCCTTCATCTTACCTATTTATGGCCTAGCTTTCTTCTCATATATATGCTTCCCATTGATATTAATTTAATATCGACTAAATTACATTTATAAGAATCCACTAAAATTATTGGGTTGGTTTTATTTATATTTGAATTTTCATCGATCTTCTTTAAGTTGTTTTAAAATAATGATAATAAGGTTAAATTGTAGAAAATAGCCAAATTTTATAATATTTTGTGTTAAAAATACTTCTAAATTTTTAAGAGTTTATTCCATACCATATACCCATAAACTTAAAAAAATAATTAAAAAAAAAAAGTTAAAAAATACTCCAACTGTATTTTGGCTAAAACCGTGAGTACTTTGTTTCAAAAATATCATTCAACTTTTAAAATTTTCAAGAATACCCACAAACCTTTAAAAATGTTCAAACTACCCTTATTGTTAGTTTGTCGCCAAAGAAACCTTTAGTATCTCATTTCATAATTGTGTTTATATTGATGAGTTTGTTTTTAAATTCGGTACTGCCTTCAACAAAGCTACAATTAACGTTCTATACAGACTTCGAATTAGAAGATCAATGATGTACACTTCAAGAACATTCGCAGGACATCGACAACAAACGTGGCAGTGTTGTTGGAGTGCAGTGAGTTGTTTCTATGTGAGGGGAGAGAGTTGAGTGACATTCATTTGACTTACGGACGAACCAACTTGAGGAATACGACCATTCTTTCATCATGCATGAAGGCAAAGATTATTTTGTTTGGGTGCAGAACCCGCCACCTTGTGTTTTATGACATTCATATGTGTGTGGTGAAGGGTGATGTATGCTTCGGGGAAAATTCCCCTTTTTTAATCTTAGTTTATTCATTAATTTAACCGTTTTTAAATTTATTCTCAATCATAATTTTATTAGACTGGTCATTTCCAATACACAAATTTTATTTCAATAAAATATTATAAAATTTCTTACTACAAACAATGATATTCCATGTGTGAAGAACCATTAAAATATATTTTAGTCTTTAAATTTAATATATATATATATATAAAACTCACGATCACACACATTGAAAAAAATATATTTTCGCACCCCTATCGGTTAAATGGACATCTCTAACTAATTAGCCAATGTATTTTATAAATTTAGTTCATCATTCTTGGATTGGATCTATATTTTTGTTTGAAAGATTCAATAAACAACTTACTTCACAACTAATATTTCACAAATGTACTAGACTTTAATTATTTTCCAAAACAAAATTTATGTATAATTTTAAGACGATTTTAACCTTTTGGTACATTCACTCTCATATTTAATTTGTCTTTTATTTTATAATTATTAAAAAATTAAAATCTATTTTATTATTACTTCTTTTAGAAACTTTTATTGTTTGAATAAAGATTAATAAAACTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCATTAAATTTGTTGTCATTTAATGATTGATAGCATCGAAATGTGTTATCTTACTTAGCTTAATCTGAGGTTGTCCCTAGATATTAAGGGTTTATTTGGTTATTTTATAGGTTTCGAGCATTTATTCAGTAGAACCAGACATTATAACTAAAATGAAGCCAAAACGGAGCTTAATTGCATCAACCAAGAAAGAGAGAAGTAAAATAACCAAAATGCCTCTGCACCTATGCATAGCGACGCTGCTTAAGCGGTGTCTTGACATCTTTTCTTGAGACTTCAGATTTTGGAGAAAACCACTGGCACCACAGTGCTACCCAAGAGCATTGGGATGCTCCAATGTCGTTTGTCGCACGTGCTCCCGTGCAAAGCCGCGACGCCATCGTGATTTTATAA

mRNA sequence

ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGAAGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGCTTCGAAGTGGAAGATCAGCGACGTTCACTTCAAAAACATTCGCGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTAAGATCAATGATGTACACTTCAAGAACATTCGCAGGACATCGACAACAAACGTGGCAGTGTTGTTGGAGTGCAGTGAGTTGTTTCTATGTGAGGGGAGAGAGTTGAGTGACATTCATTTGACTTACGGACGAACCAACTTGAGGAATACGACCATTCTTTCATCATGCATGAAGGCAAAGATTATTTTGTTTGGGTGCAGAACCCGCCACCTTGTGTTTTATGACATTCATATGTGTGTGGTGAAGGGTGATCGACGCTGCTTAAGCGGTGTCTTGACATCTTTTCTTGAGACTTCAGATTTTGGAGAAAACCACTGGCACCACAGTGCTACCCAAGAGCATTGGGATGCTCCAATGTCGTTTGTCGCACGTGCTCCCGTGCAAAGCCGCGACGCCATCGTGATTTTATAA

Coding sequence (CDS)

ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCTCTGAAGTTCTAGTAAAGAACTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGCTTCGAAGTGGAAGATCAGCGACGTTCACTTCAAAAACATTCGCGGGACATCCACGACGAACGTGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTAAGATCAATGATGTACACTTCAAGAACATTCGCAGGACATCGACAACAAACGTGGCAGTGTTGTTGGAGTGCAGTGAGTTGTTTCTATGTGAGGGGAGAGAGTTGAGTGACATTCATTTGACTTACGGACGAACCAACTTGAGGAATACGACCATTCTTTCATCATGCATGAAGGCAAAGATTATTTTGTTTGGGTGCAGAACCCGCCACCTTGTGTTTTATGACATTCATATGTGTGTGGTGAAGGGTGATCGACGCTGCTTAAGCGGTGTCTTGACATCTTTTCTTGAGACTTCAGATTTTGGAGAAAACCACTGGCACCACAGTGCTACCCAAGAGCATTGGGATGCTCCAATGTCGTTTGTCGCACGTGCTCCCGTGCAAAGCCGCGACGCCATCGTGATTTTATAA

Protein sequence

MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVKINDVHFKNIRRTSTTNVAVLLECSELFLCEGRELSDIHLTYGRTNLRNTTILSSCMKAKIILFGCRTRHLVFYDIHMCVVKGDRRCLSGVLTSFLETSDFGENHWHHSATQEHWDAPMSFVARAPVQSRDAIVIL

Homology

[Close]

BLAST of Clc09G06100 vs. NCBI nr
Match: XP_038896336.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 816.2 bits (2107), Expect = 1.8e-232
Identity = 398/458 (86.90%), Postives = 423/458 (92.36%), Query Frame = 0


Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPL 60
           MTMT S SLFQILLL F WQCCA+VAAIFDD+TG AN+ +G+VST NQ LLH AAAP PL
Sbjct: 1   MTMT-SPSLFQILLLAFAWQCCAEVAAIFDDITGTANLVNGVVSTVNQPLLHPAAAPLPL 60

Query: 61  RIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTV 120
            IGTLPD+GGTVNDIKANVDLNGNGG+VFDVTKHGAKGDGKTDDAQAFMTTWI ACRN  
Sbjct: 61  GIGTLPDLGGTVNDIKANVDLNGNGGSVFDVTKHGAKGDGKTDDAQAFMTTWIEACRNAE 120

Query: 121 GPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFI 180
           GPAKFLIP+GTFLVGPVTFAGPCKSFPITLEN+GTVKATTDIT+YSSPEWFSIE+ITGFI
Sbjct: 121 GPAKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDITQYSSPEWFSIEEITGFI 180

Query: 181 LTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFY 240
           LTGSGVFDGQGAA+WPYNDCKK+  CQ LPISIKF++LNHTIVDGL+S+NSKGFHTS+FY
Sbjct: 181 LTGSGVFDGQGAASWPYNDCKKNTKCQILPISIKFTKLNHTIVDGLASLNSKGFHTSIFY 240

Query: 241 SYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVT 300
            YNFTATNMNIIAPGNSPNTDGMH+STSKLVTITNSVIGTGDDCVSIGHS EKI VTNVT
Sbjct: 241 CYNFTATNMNIIAPGNSPNTDGMHISTSKLVTITNSVIGTGDDCVSIGHSTEKIVVTNVT 300

Query: 301 CGPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIV 360
           CGPGHGLSVGSLGKY KEK V +VLVKNCTIFNATNGARIKTWASPISG+ASGI FEDI+
Sbjct: 301 CGPGHGLSVGSLGKYSKEKSVYDVLVKNCTIFNATNGARIKTWASPISGLASGITFEDII 360

Query: 361 MYNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVEL 420
           MYNVKNPIIIDQTYGTK  K AS WKISDVHFKNIRGTSTTNVAV LECSELLPCE VEL
Sbjct: 361 MYNVKNPIIIDQTYGTK-QKKASNWKISDVHFKNIRGTSTTNVAVSLECSELLPCEEVEL 420

Query: 421 RDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           RDINLTYGG NLRNTTILSSC NAK  ++G+QNPP CV
Sbjct: 421 RDINLTYGGPNLRNTTILSSCSNAKIDSYGMQNPPACV 456

[Close]

BLAST of Clc09G06100 vs. NCBI nr
Match: KAA0048661.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK18163.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 786.6 bits (2030), Expect = 1.5e-223
Identity = 391/457 (85.56%), Postives = 409/457 (89.50%), Query Frame = 0


Query: 3   MTRSLSL-FQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLR 62
           MTR+LSL  QILLLVF  QC AKVAA  DDVTG  N+    V T N+Q L  A APR L 
Sbjct: 1   MTRNLSLVIQILLLVFASQCSAKVAATLDDVTGTENLLKVTVPTVNEQFLRPAGAPRRLG 60

Query: 63  IGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVG 122
           IGTLPDIG TVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  IGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 123 PAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFIL 182
           PAKFLIP+GT+LVGPVTFAGPCKSFPITLEN+GTVKATTDI+EYSSPEWFSIEDITGFIL
Sbjct: 121 PAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFIL 180

Query: 183 TGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYS 242
           TGSGVFDGQG   WPYNDCKK++FCQ LPISIKFSRLNHTIVDGL+S+NS GFHTSVFY 
Sbjct: 181 TGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYC 240

Query: 243 YNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTC 302
           YNFTATNM IIAP NSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS E I VTNVTC
Sbjct: 241 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTC 300

Query: 303 GPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVM 362
           GPGHGLSVGSLGKY KEK V  VLVKNCTIFNATNGARIKTWAS ISG+ASGIIFEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLASGIIFEDIVM 360

Query: 363 YNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 422
           YNVKNPIIIDQTYGTK  K  S WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR
Sbjct: 361 YNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 420

Query: 423 DINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           DINLTYGGTNLRNTTI+SSC NAK +TFGVQNPPPCV
Sbjct: 421 DINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCV 456

[Close]

BLAST of Clc09G06100 vs. NCBI nr
Match: XP_031745094.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 784.3 bits (2024), Expect = 7.6e-223
Identity = 384/456 (84.21%), Postives = 408/456 (89.47%), Query Frame = 0


Query: 3   MTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRI 62
           MTR+LSL QILLLVF WQCC   A +FDD+TG  N   GIV T N+Q L  A APR L  
Sbjct: 1   MTRNLSLIQILLLVFAWQCC---AVVFDDITGTQNRLKGIVPTTNEQFLRPAEAPRRLGF 60

Query: 63  GTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGP 122
            TLP+IGGTVNDIKANVDLN NGG+VFDVTKHGAK +GKTDDAQAFMTTWIAACRNTVGP
Sbjct: 61  STLPNIGGTVNDIKANVDLNQNGGSVFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVGP 120

Query: 123 AKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILT 182
           AKFLIP+GTFLVGPVTFAGPCKSFPITLEN+GTVKATTDI+ YSSPEWFSIEDITGFILT
Sbjct: 121 AKFLIPQGTFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSPEWFSIEDITGFILT 180

Query: 183 GSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSY 242
           GSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNHTIVDGL+S+NS GFHTSVFY Y
Sbjct: 181 GSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTSVNSMGFHTSVFYCY 240

Query: 243 NFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCG 302
           NFTATNM IIAP NSPNTDGMHLSTSKLVTI NSVIGTGDDCVSIGHS E ITVTNVTCG
Sbjct: 241 NFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCG 300

Query: 303 PGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMY 362
           PGHGLSVGSLGKY KEKGV +VLVKNCTIFNATNGARIKTWASP+SG+AS IIFEDIVMY
Sbjct: 301 PGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIVMY 360

Query: 363 NVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRD 422
           NVKNPIIIDQTYGTK  K  S WK+S+V FKNIRGTSTTNVAVLLECS+L PCEGVELRD
Sbjct: 361 NVKNPIIIDQTYGTK-KKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRD 420

Query: 423 INLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           INL+YGGTNLRNTTI+SSC NAK +TFGVQNPPPCV
Sbjct: 421 INLSYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCV 452

[Close]

BLAST of Clc09G06100 vs. NCBI nr
Match: KAA0043575.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 783.9 bits (2023), Expect = 1.0e-222
Identity = 390/457 (85.34%), Postives = 408/457 (89.28%), Query Frame = 0


Query: 3   MTRSLSL-FQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLR 62
           MTR+LSL  QILLLVF  QC AK AA  DDVTG  N+    V T N+Q L  A APR L 
Sbjct: 1   MTRNLSLVIQILLLVFASQCSAKDAATLDDVTGTENLLKVTVPTVNEQFLRPAGAPRRLG 60

Query: 63  IGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVG 122
           IGTLPDIG TVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  IGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 123 PAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFIL 182
           PAKFLIP+GT+LVGPVTFAGPCKSFPITLEN+GTVKATTDI+EYSSPEWFSIEDITGFIL
Sbjct: 121 PAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFIL 180

Query: 183 TGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYS 242
           TGSGVFDGQG   WPYNDCKK++FCQ LPISIKFSRLNHTIVDGL+S+NS GFHTSVFY 
Sbjct: 181 TGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYC 240

Query: 243 YNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTC 302
           YNFTATNM IIAP NSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS E I VTNVTC
Sbjct: 241 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTC 300

Query: 303 GPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVM 362
           GPGHGLSVGSLGKY KEK V  VLVKNCTIFNATNGARIKTWAS ISG+ASGIIFEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLASGIIFEDIVM 360

Query: 363 YNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 422
           YNVKNPIIIDQTYGTK  K  S WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR
Sbjct: 361 YNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 420

Query: 423 DINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           DINLTYGGTNLRNTTI+SSC NAK +TFGVQNPPPCV
Sbjct: 421 DINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCV 456

[Close]

BLAST of Clc09G06100 vs. NCBI nr
Match: XP_031741281.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 768.1 bits (1982), Expect = 5.7e-218
Identity = 379/456 (83.11%), Postives = 402/456 (88.16%), Query Frame = 0


Query: 3   MTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRI 62
           MTR+LSL QI+LL F WQ C   A IF+D+TG  N+  GIV T N+Q L  A APR L  
Sbjct: 1   MTRNLSLIQIILLEFAWQSC---AVIFNDITGTQNLLKGIVPTTNKQFLRPAEAPRHLGF 60

Query: 63  GTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGP 122
            TLPDIGGTVNDI ANVDLN NGG+VFDVTKHGAK DGKTDDAQAFMTTWIAACRNTVGP
Sbjct: 61  NTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGP 120

Query: 123 AKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILT 182
           AKFLIP+GTFLVGPVTFAGPCKS+PITLEN+GTVKATTDI+ YSSPEWFSIEDITGFILT
Sbjct: 121 AKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSIEDITGFILT 180

Query: 183 GSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSY 242
           GSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNHTIVDGL+SINS GFHTSVFY Y
Sbjct: 181 GSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCY 240

Query: 243 NFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCG 302
           NFTATNM IIAP NSPNTDG HLSTSKLVTI NSVIGTGDDCVSIGHS E ITVTNVTCG
Sbjct: 241 NFTATNMKIIAPHNSPNTDGTHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCG 300

Query: 303 PGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMY 362
           PGHGLSVGSLGKY KEKGV +VLVKNCTIFNATNGARIKTWAS ISG+AS IIFEDIVMY
Sbjct: 301 PGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRISGLASRIIFEDIVMY 360

Query: 363 NVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRD 422
           NVKNPIIIDQTY TK  K  S WK+S+V FKNIRGTSTTNVAVLLECS+L PCEGVELRD
Sbjct: 361 NVKNPIIIDQTYSTK-KKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRD 420

Query: 423 INLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           INL+YGGTNLRNTTI+SSC NAK +TFGVQ PPPCV
Sbjct: 421 INLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCV 452

[Close]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 6.5e-92
Identity = 170/348 (48.85%), Postives = 224/348 (64.37%), Query Frame = 0


Query: 82  NGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAG 141
           N     V+D+TK GA GDG T+  +AF+ TWI  C + V PA  L+P+GTFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 142 PCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCK 201
           PCKS  +T+   GT+ ATT  + Y++PEWF  E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 202 KSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTD 261
           K   C   P S+KF  + +  ++G+SS+N+K FH  +  + N    N+ + AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 262 GMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGV 321
           G+HLS +  V+I +S I TGDDCVS+G     +TV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 322 SEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKM 381
           S + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++G   
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGD- 344

Query: 382 ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGG 430
            S+  ISD+ FKNIRGT+ T   V + CS+ +PC+GV + D+NL Y G
Sbjct: 345 -SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 386

[Close]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.2e-87
Identity = 169/373 (45.31%), Postives = 238/373 (63.81%), Query Frame = 0


Query: 88  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFP 147
           VFD+TK+GA  +   D ++A +  +  AC++T  P+  +IP+GTF +  V   GPCKS P
Sbjct: 26  VFDITKYGA--NSNADISEALLNAFKEACQST-SPSTIVIPKGTFTMNQVKLEGPCKS-P 85

Query: 148 ITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQ 207
           + L+ + T+KA +D ++    EW ++  +  F ++G G+ DGQ AA W   +CK+SK C 
Sbjct: 86  LELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCN 145

Query: 208 ALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLST 267
            LP ++ F+ L ++ +  +++++SK FH +V    N T    N+ AP NSPNTDG+H+S 
Sbjct: 146 KLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSR 205

Query: 268 SKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSEVLVK 327
           S  V IT+S   TGDDC+S+G   E++ +T VTCGPGHG+SVGSLG  P EK V  V V+
Sbjct: 206 SSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVR 265

Query: 328 NCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTY--GTKGNK-MASK 387
           NCT  N  NG RIKTW +   GV + + FEDI++ NV NP++IDQ Y    K NK + S+
Sbjct: 266 NCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQ 325

Query: 388 WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTNLRNTTILSSCMNA 447
            KIS V F+NI+GTS T  AV L  S+ +PCEG+E+ DI++TY G   +     SSC N 
Sbjct: 326 VKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG---KEGPAKSSCENI 385

Query: 448 KFSTFGVQNPPPC 458
           K S  G QNPP C
Sbjct: 386 KPSLKGKQNPPVC 388

[Close]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.1e-86
Identity = 175/392 (44.64%), Postives = 237/392 (60.46%), Query Frame = 0


Query: 73  NDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTF 132
           ND KA    +G GG+ FD+TK GA G+GKTD  +A    W +AC  T G    LIP+G F
Sbjct: 30  NDAKA----SGPGGS-FDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDF 89

Query: 133 LVGPVTFAGPCKSFPITLENRGTVKATTDITEYSS-PEWFSIEDITGFILTGSGVFDGQG 192
           LVGP+ F GPCK   +T++  G + ATTD+++Y     W  I  +   ++TG G  DGQG
Sbjct: 90  LVGPLNFTGPCKG-DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQG 149

Query: 193 AATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNI 252
            A W  N C K   C+ LP S+    +N+  V G++ +NSK FH +++   +    ++N+
Sbjct: 150 PAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNV 209

Query: 253 IAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGS 312
            APG+SPNTDG+H+  S  VTITN+VIG GDDC+SIG    K+ +T VTCGPGHG+S+GS
Sbjct: 210 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGS 269

Query: 313 LGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGV-ASGIIFEDIVMYNVKNPIII 372
           LG+Y  EK V+++ VK+CT+    NG RIK +    S + AS I +E+I M +   PIII
Sbjct: 270 LGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII 329

Query: 373 DQTYGTKGNKM-----ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINL 432
           D  Y    NK+     ASK  + DV FKNI GTS+T  AV L C+  +PC GV + D+N+
Sbjct: 330 DMKYCP--NKLCTANGASKVTVKDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNI 389

Query: 433 TYGGTNLRNTTILSSCMNAKFSTFGVQNPPPC 458
            Y GTN +   +   C NAK S  G      C
Sbjct: 390 KYSGTNNKTMAV---CKNAKGSAKGCLKELAC 409

[Close]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.6e-85
Identity = 161/374 (43.05%), Postives = 230/374 (61.50%), Query Frame = 0


Query: 84  NGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPC 143
           + G+VF+V  +GAKG G  D +QA M  W AAC +  GP+  LIP+G + +G V   GPC
Sbjct: 5   SSGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGPC 64

Query: 144 KSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKS 203
           K   I  +  G VKA  D +++ S  W S   I G  ++G+G  DGQG   W  N+C K+
Sbjct: 65  KGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKN 124

Query: 204 KFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGM 263
             C+   ++++F  L H +V  ++S+NSK FH +V    + T  ++ + APG S NTDG+
Sbjct: 125 PNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGI 184

Query: 264 HLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSE 323
           H+  SK VTITN+ I TGDDC+SIG   + +T+T V CGPGHG+S+GSLG+Y  EK V  
Sbjct: 185 HVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRG 244

Query: 324 VLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQ---TYGTKGNK 383
           + VK CT     NG R+KTW +   G A+ + F+D+ M NV+NP+I+DQ    YG    +
Sbjct: 245 ITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQ 304

Query: 384 MASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTNLRNTTILSS 443
             S+ K+S+++F NIRGTST  VAV++ CS  +PC  +++ +INL+Y G     T   S+
Sbjct: 305 APSRIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPAT---ST 364

Query: 444 CMNAKFSTFGVQNP 455
           C N K +  G Q P
Sbjct: 365 CSNVKPTFSGKQVP 372

[Close]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-83
Identity = 171/398 (42.96%), Postives = 229/398 (57.54%), Query Frame = 0


Query: 68  IGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 127
           +GG    + A V      GA  DV   GAKGD KTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVS-GAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 128 PEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDI-TEYSSPEWFSIEDITGFILTGS-G 187
           P+G ++V  + F GPCK  P+TLE  G  KA   + T      W   E+I  F L G+  
Sbjct: 110 PKGEYMVESLEFKGPCKG-PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKA 169

Query: 188 VFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFT 247
           +FDGQG+  W  NDC K+  C +LPI+I+F+ L ++ ++ ++S NSK FH ++    N T
Sbjct: 170 IFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNIT 229

Query: 248 ATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGH 307
            +++ I AP  S NTDG+H+  S  V +  + I TGDDCVSIG   E + V NV CGPGH
Sbjct: 230 LSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGH 289

Query: 308 GLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVK 367
           G+S+GSLG+YP E+ V  V V+ C I N  NG RIKTW     G+AS I+FEDI M NV 
Sbjct: 290 GISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVS 349

Query: 368 NPIIIDQTYGTKGNKMA---SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRD 427
            P++IDQ Y   G+  A   S+ K+SDV  K I+GTS T VAV L CS+ +PC  + L D
Sbjct: 350 LPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSD 409

Query: 428 INLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVKI 461
           INL + G   +    +S+C N K    G   P  C ++
Sbjct: 410 INLVHNG---KEGPAVSACSNIKPILSGKLVPAACTEV 439

[Close]

BLAST of Clc09G06100 vs. ExPASy TrEMBL
Match: A0A5A7U4W1 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00950 PE=3 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 7.4e-224
Identity = 391/457 (85.56%), Postives = 409/457 (89.50%), Query Frame = 0


Query: 3   MTRSLSL-FQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLR 62
           MTR+LSL  QILLLVF  QC AKVAA  DDVTG  N+    V T N+Q L  A APR L 
Sbjct: 1   MTRNLSLVIQILLLVFASQCSAKVAATLDDVTGTENLLKVTVPTVNEQFLRPAGAPRRLG 60

Query: 63  IGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVG 122
           IGTLPDIG TVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  IGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 123 PAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFIL 182
           PAKFLIP+GT+LVGPVTFAGPCKSFPITLEN+GTVKATTDI+EYSSPEWFSIEDITGFIL
Sbjct: 121 PAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFIL 180

Query: 183 TGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYS 242
           TGSGVFDGQG   WPYNDCKK++FCQ LPISIKFSRLNHTIVDGL+S+NS GFHTSVFY 
Sbjct: 181 TGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYC 240

Query: 243 YNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTC 302
           YNFTATNM IIAP NSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS E I VTNVTC
Sbjct: 241 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTC 300

Query: 303 GPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVM 362
           GPGHGLSVGSLGKY KEK V  VLVKNCTIFNATNGARIKTWAS ISG+ASGIIFEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLASGIIFEDIVM 360

Query: 363 YNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 422
           YNVKNPIIIDQTYGTK  K  S WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR
Sbjct: 361 YNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 420

Query: 423 DINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           DINLTYGGTNLRNTTI+SSC NAK +TFGVQNPPPCV
Sbjct: 421 DINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCV 456

[Close]

BLAST of Clc09G06100 vs. ExPASy TrEMBL
Match: A0A5A7TQ89 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36913G00010 PE=3 SV=1)

HSP 1 Score: 783.9 bits (2023), Expect = 4.8e-223
Identity = 390/457 (85.34%), Postives = 408/457 (89.28%), Query Frame = 0


Query: 3   MTRSLSL-FQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLR 62
           MTR+LSL  QILLLVF  QC AK AA  DDVTG  N+    V T N+Q L  A APR L 
Sbjct: 1   MTRNLSLVIQILLLVFASQCSAKDAATLDDVTGTENLLKVTVPTVNEQFLRPAGAPRRLG 60

Query: 63  IGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVG 122
           IGTLPDIG TVNDI+AN+ LN NGG+VFDVTKHGAK DG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  IGTLPDIGSTVNDIRANIVLNENGGSVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 123 PAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFIL 182
           PAKFLIP+GT+LVGPVTFAGPCKSFPITLEN+GTVKATTDI+EYSSPEWFSIEDITGFIL
Sbjct: 121 PAKFLIPQGTYLVGPVTFAGPCKSFPITLENQGTVKATTDISEYSSPEWFSIEDITGFIL 180

Query: 183 TGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYS 242
           TGSGVFDGQG   WPYNDCKK++FCQ LPISIKFSRLNHTIVDGL+S+NS GFHTSVFY 
Sbjct: 181 TGSGVFDGQGVTVWPYNDCKKNRFCQLLPISIKFSRLNHTIVDGLTSVNSMGFHTSVFYC 240

Query: 243 YNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTC 302
           YNFTATNM IIAP NSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHS E I VTNVTC
Sbjct: 241 YNFTATNMKIIAPHNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSTENIVVTNVTC 300

Query: 303 GPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVM 362
           GPGHGLSVGSLGKY KEK V  VLVKNCTIFNATNGARIKTWAS ISG+ASGIIFEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKSVYNVLVKNCTIFNATNGARIKTWASRISGLASGIIFEDIVM 360

Query: 363 YNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 422
           YNVKNPIIIDQTYGTK  K  S WKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR
Sbjct: 361 YNVKNPIIIDQTYGTK-KKKVSNWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELR 420

Query: 423 DINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           DINLTYGGTNLRNTTI+SSC NAK +TFGVQNPPPCV
Sbjct: 421 DINLTYGGTNLRNTTIVSSCSNAKIATFGVQNPPPCV 456

[Close]

BLAST of Clc09G06100 vs. ExPASy TrEMBL
Match: A0A1S3BRD3 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1)

HSP 1 Score: 736.5 bits (1900), Expect = 8.8e-209
Identity = 367/458 (80.13%), Postives = 399/458 (87.12%), Query Frame = 0


Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPL 60
           MT+TR + LFQILL VF WQCC KV+AI +D+   AN+   IVST NQQL    AAP PL
Sbjct: 1   MTITRDIGLFQILLWVFAWQCCDKVSAITNDI---ANLNYEIVSTINQQLPSPVAAPGPL 60

Query: 61  RIGTLPDIGGTVN-DIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNT 120
            I TLPD+   VN DI  N DLNGNGG+VF VTKHGAK DGKTDDAQAF+TTWI ACRNT
Sbjct: 61  GIETLPDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNT 120

Query: 121 VGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGF 180
           VGPAK LIPEGT+LVGPVT AGPCKSFPITLEN+GTVKATTDI++YSSPEWFSIEDITGF
Sbjct: 121 VGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGF 180

Query: 181 ILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVF 240
           ILTGSGVFDGQG A WPYNDCK +  CQ LPISIKFSRLN TIVD L+S+NSKGFH S+F
Sbjct: 181 ILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLF 240

Query: 241 YSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNV 300
             YNFTATN+NIIAP +SPNTDG+HLSTSKLV I NS+IGTGDDCVSIGHS EKITVTNV
Sbjct: 241 SCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNV 300

Query: 301 TCGPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDI 360
           TCGPGHGLSVGSLGKYP+EK V +VLVKNCTIFNATNGARIKT+ASPISG ASGIIFEDI
Sbjct: 301 TCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSASGIIFEDI 360

Query: 361 VMYNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVE 420
           VMYNVK PIIIDQTY T  NK  SKWK+SDVHFKNIRGTS TNVAVLL+CS+LLPCEGVE
Sbjct: 361 VMYNVKYPIIIDQTYDTNENK-ESKWKVSDVHFKNIRGTSATNVAVLLDCSKLLPCEGVE 420

Query: 421 LRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPC 458
           LRDI+LTYGGT+L+NTTI+SSC NAK +TFGVQNPPPC
Sbjct: 421 LRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPC 454

[Close]

BLAST of Clc09G06100 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 2.6e-208
Identity = 366/458 (79.91%), Postives = 398/458 (86.90%), Query Frame = 0


Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPL 60
           MT+TR + LFQILL VF WQCC KV+AI +D+   AN+   IVST NQQL    AAP P 
Sbjct: 1   MTITRDIGLFQILLWVFAWQCCDKVSAITNDI---ANLNYEIVSTINQQLPSPVAAPGPF 60

Query: 61  RIGTLPDIGGTVN-DIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNT 120
            I TLPD+   VN DI  N DLNGNGG+VF VTKHGAK DGKTDDAQAF+TTWI ACRNT
Sbjct: 61  GIETLPDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNT 120

Query: 121 VGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGF 180
           VGPAK LIPEGT+LVGPVT AGPCKSFPITLEN+GTVKATTDI++YSSPEWFSIEDITGF
Sbjct: 121 VGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGF 180

Query: 181 ILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVF 240
           ILTGSGVFDGQG A WPYNDCK +  CQ LPISIKFSRLN TIVD L+S+NSKGFH S+F
Sbjct: 181 ILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLF 240

Query: 241 YSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNV 300
             YNFTATN+NIIAP +SPNTDG+HLSTSKLV I NS+IGTGDDCVSIGHS EKITVTNV
Sbjct: 241 SCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNV 300

Query: 301 TCGPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDI 360
           TCGPGHGLSVGSLGKYP+EK V +VLVKNCTIFNATNGARIKT+ASPISG ASGIIFEDI
Sbjct: 301 TCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSASGIIFEDI 360

Query: 361 VMYNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVE 420
           VMYNVK PIIIDQTY T  NK  SKWK+SDVHFKNIRGTS TNVAVLL+CS+LLPCEGVE
Sbjct: 361 VMYNVKYPIIIDQTYDTNENK-ESKWKVSDVHFKNIRGTSATNVAVLLDCSKLLPCEGVE 420

Query: 421 LRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPC 458
           LRDI+LTYGGT+L+NTTI+SSC NAK +TFGVQNPPPC
Sbjct: 421 LRDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPC 454

[Close]

BLAST of Clc09G06100 vs. ExPASy TrEMBL
Match: A0A0A0KMA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 727.6 bits (1877), Expect = 4.1e-206
Identity = 355/418 (84.93%), Postives = 376/418 (89.95%), Query Frame = 0


Query: 41  GIVSTKNQQLLHSAAAPRPLRIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDG 100
           GIV T N+Q L  A APR L   TLPDIGGTVNDI ANVDLN NGG+VFDVTKHGAK DG
Sbjct: 8   GIVPTTNKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADG 67

Query: 101 KTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATT 160
           KTDDAQAFMTTWIAACRNTVGPAKFLIP+GTFLVGPVTFAGPCKS+PITLEN+GTVKATT
Sbjct: 68  KTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATT 127

Query: 161 DITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNH 220
           DI+ YSSPEWFS+EDITGFILTGSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNH
Sbjct: 128 DISAYSSPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNH 187

Query: 221 TIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGT 280
           TIVDGL+SINS GFHTSVFY YNFTATNM IIAP NSPNTDGMHLSTSKLVTI NS+IGT
Sbjct: 188 TIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGT 247

Query: 281 GDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARI 340
           GDDCVSIGHS E ITVTNVTCGPGHGL   SLGKY KEKGV +VLVKNCTIFNATNGARI
Sbjct: 248 GDDCVSIGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARI 307

Query: 341 KTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKMASKWKISDVHFKNIRGTST 400
           KTWASP+SG+AS IIFEDIVMYNVKNPIIIDQTYGTK  K  S WK+S+V FKNIRGTST
Sbjct: 308 KTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTK-KKKESNWKVSNVQFKNIRGTST 367

Query: 401 TNVAVLLECSELLPCEGVELRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCV 459
           TNVAVLLECS+L PCEGVELRDINL+YGGTNLRNTTI+SSC NAK +TFGVQ PPPCV
Sbjct: 368 TNVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCV 421

[Close]

BLAST of Clc09G06100 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 339.7 bits (870), Expect = 4.6e-93
Identity = 170/348 (48.85%), Postives = 224/348 (64.37%), Query Frame = 0


Query: 82  NGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAG 141
           N     V+D+TK GA GDG T+  +AF+ TWI  C + V PA  L+P+GTFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 142 PCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCK 201
           PCKS  +T+   GT+ ATT  + Y++PEWF  E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 202 KSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTD 261
           K   C   P S+KF  + +  ++G+SS+N+K FH  +  + N    N+ + AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 262 GMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGV 321
           G+HLS +  V+I +S I TGDDCVS+G     +TV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 322 SEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKM 381
           S + V NCT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++G   
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGD- 344

Query: 382 ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGG 430
            S+  ISD+ FKNIRGT+ T   V + CS+ +PC+GV + D+NL Y G
Sbjct: 345 -SQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVDVNLDYVG 386

[Close]

BLAST of Clc09G06100 vs. TAIR 10
Match: AT4G18180.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 331.3 bits (848), Expect = 1.6e-90
Identity = 173/382 (45.29%), Postives = 241/382 (63.09%), Query Frame = 0


Query: 90  DVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFP-I 149
           DV   GA+ +   D  +AF+  W  AC+++      +IP G F VG + F+GPC +   +
Sbjct: 36  DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNL 95

Query: 150 TLENRGTVKATTDITEY-SSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQ 209
           T+     VKA+TD+++Y S   W     I G  LTG G FDGQGA  WP+N+C     C+
Sbjct: 96  TVR----VKASTDLSKYRSGGGWIQFGWINGLTLTGGGTFDGQGALAWPFNNCTSDSNCK 155

Query: 210 ALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLST 269
            LP S+KF  +N T+V  +SS+NSK FH ++    +F  T +NI AP +SPNTDG+H+  
Sbjct: 156 LLPTSLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIER 215

Query: 270 SKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSEVLVK 329
           S  V  + S I TGDDCVSIG    +IT+T++ CGPGHG+SVGSLG+YP EK V+ ++VK
Sbjct: 216 SSNVYFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVK 275

Query: 330 NCTIFNATNGARIKTWA-SPISGVASGIIFEDIVMYNVKNPIIIDQTY---GTKGNKMAS 389
           +C I   TNG RIKTWA SP    A+ + FE+I+M NV NPIIIDQ+Y    +  + + S
Sbjct: 276 DCKISGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPS 335

Query: 390 KWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINL----TYGG----TNLRNT 449
           K ++S+++FKNIRGTS++ VAV L CS  +PC+ V L +++L    + GG    +N  N 
Sbjct: 336 KVELSEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNE 395

Query: 450 TILSSCMNAKFSTFGVQNPPPC 458
            + SSC N + +  G Q PPPC
Sbjct: 396 AVSSSCRNVRANYIGTQIPPPC 413

[Close]

BLAST of Clc09G06100 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 323.2 bits (827), Expect = 4.5e-88
Identity = 176/398 (44.22%), Postives = 232/398 (58.29%), Query Frame = 0


Query: 68  IGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 127
           +GG    + A V     GGA  DV   GAKGDGKTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVTGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 128 PEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDI-TEYSSPEWFSIEDITGFILTGS-G 187
           P+G +LV  + F GPCK  P+TLE  G  KA   + T      W   E++  F L G+  
Sbjct: 110 PKGEYLVESLEFKGPCKG-PVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKA 169

Query: 188 VFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFT 247
           +FDGQG+  W  NDC K+  C +LPI+I+F+ L ++ ++ ++S NSK FH ++    N T
Sbjct: 170 IFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNIT 229

Query: 248 ATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGH 307
            T++ I AP  S NTDG+H+  S  V +  + I TGDDCVSIG   E + V NV CGPGH
Sbjct: 230 LTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGH 289

Query: 308 GLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVK 367
           G+S+GSLG+YP E+ V  V V+ C I N  NG RIKTW     G+AS I+FEDI M NV 
Sbjct: 290 GISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVS 349

Query: 368 NPIIIDQTYGTKGNKMA---SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRD 427
            P++IDQ Y   G+  A   SK K+SDV  KNI+GTS T VAV L CS+ +PC  + L D
Sbjct: 350 LPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSD 409

Query: 428 INLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVKI 461
           INL + G   +    +S+C N K    G   P  C ++
Sbjct: 410 INLVHNG---KEGPAVSACSNIKPILSGKLVPAACTEV 440

[Close]

BLAST of Clc09G06100 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 312.4 bits (799), Expect = 7.9e-85
Identity = 171/398 (42.96%), Postives = 229/398 (57.54%), Query Frame = 0


Query: 68  IGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 127
           +GG    + A V      GA  DV   GAKGD KTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVS-GAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 128 PEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDI-TEYSSPEWFSIEDITGFILTGS-G 187
           P+G ++V  + F GPCK  P+TLE  G  KA   + T      W   E+I  F L G+  
Sbjct: 110 PKGEYMVESLEFKGPCKG-PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKA 169

Query: 188 VFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFT 247
           +FDGQG+  W  NDC K+  C +LPI+I+F+ L ++ ++ ++S NSK FH ++    N T
Sbjct: 170 IFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNIT 229

Query: 248 ATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGH 307
            +++ I AP  S NTDG+H+  S  V +  + I TGDDCVSIG   E + V NV CGPGH
Sbjct: 230 LSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGH 289

Query: 308 GLSVGSLGKYPKEKGVSEVLVKNCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVK 367
           G+S+GSLG+YP E+ V  V V+ C I N  NG RIKTW     G+AS I+FEDI M NV 
Sbjct: 290 GISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVS 349

Query: 368 NPIIIDQTYGTKGNKMA---SKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRD 427
            P++IDQ Y   G+  A   S+ K+SDV  K I+GTS T VAV L CS+ +PC  + L D
Sbjct: 350 LPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSD 409

Query: 428 INLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVKI 461
           INL + G   +    +S+C N K    G   P  C ++
Sbjct: 410 INLVHNG---KEGPAVSACSNIKPILSGKLVPAACTEV 439

[Close]

BLAST of Clc09G06100 vs. TAIR 10
Match: AT2G33160.1 (glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein )

HSP 1 Score: 296.2 bits (757), Expect = 5.9e-80
Identity = 158/376 (42.02%), Postives = 225/376 (59.84%), Query Frame = 0


Query: 88  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFP 147
           +FDV  +GA+ D + D+A AF   W  AC+ + G +   IP G F +  VTF+GPCKS  
Sbjct: 31  IFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCKS-S 90

Query: 148 ITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQ 207
           IT   RGT+ A  +    +  EW   + +    +TG G+ DGQG+ +WP NDC K+  C+
Sbjct: 91  ITFFIRGTLLAPRNPYAINQEEWILFKYVDNLTVTGGGLLDGQGSYSWPLNDCNKNTNCR 150

Query: 208 ALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLST 267
            L ++I F+ +  + ++GL SINSK  H ++F   +F  T + I APG+SPNTDG+ +  
Sbjct: 151 TLAMNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGK 210

Query: 268 SKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVSEVLVK 327
           S  + I N  IGTGDDC++I      + +++V CGPGHG+SVGSLG+Y +EK V  + V+
Sbjct: 211 SSHMQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVR 270

Query: 328 NCTIFNATNGARIKTWASPISGVA-SGIIFEDIVMYNVKNPIIIDQTYGTKG-----NKM 387
           N  I   T+G RIKTWA  +S ++ S  ++E+I M NV NPI+IDQ Y   G      K 
Sbjct: 271 NSIINGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKY 330

Query: 388 ASKWKISDVHFKNIRGTSTTNVAVLLECSELLPCEGVELRDINLTYGGTNLRNTTILSSC 447
           AS  +I DV + NI GTST+  A+ ++CS+  PC+ VEL +INL Y G   R+  + + C
Sbjct: 331 ASHVQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVG---RDGLVTALC 390

Query: 448 MNAKFSTFGVQNPPPC 458
            N   S  G   P  C
Sbjct: 391 ENVGGSIRGKIVPANC 402

The following BLAST results are available for this feature:

BLAST of Clc09G06100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896336.1	1.8e-232	86.90	exopolygalacturonase-like [Benincasa hispida]	[more]
KAA0048661.1	1.5e-223	85.56	exopolygalacturonase-like [Cucumis melo var. makuwa] >KAA0048665.1 exopolygalact...	[more]
XP_031745094.1	7.6e-223	84.21	exopolygalacturonase-like [Cucumis sativus]	[more]
KAA0043575.1	1.0e-222	85.34	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]
XP_031741281.1	5.7e-218	83.11	exopolygalacturonase [Cucumis sativus]	[more]

BLAST of Clc09G06100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49062	6.5e-92	48.85	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
Q05967	2.2e-87	45.31	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P35339	9.1e-86	44.64	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
Q6H9K0	2.6e-85	43.05	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P49063	1.1e-83	42.96	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of Clc09G06100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4W1	7.4e-224	85.56	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TQ89	4.8e-223	85.34	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3BRD3	8.8e-209	80.13	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103492867 PE=3 SV=1	[more]
A0A5D3C9J8	2.6e-208	79.91	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KMA6	4.1e-206	84.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222970 PE=3 SV=1	[more]

BLAST of Clc09G06100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02790.1	4.6e-93	48.85	polygalacturonase 4	[more]
AT4G18180.1	1.6e-90	45.29	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	4.5e-88	44.22	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	7.9e-85	42.96	Pectin lyase-like superfamily protein	[more]
AT2G33160.1	5.9e-80	42.02	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 291..311 e-value: 6700.0 score: 1.3 coord: 268..289 e-value: 750.0 score: 8.1 coord: 241..267 e-value: 4800.0 score: 2.4 coord: 321..342 e-value: 34.0 score: 13.3 coord: 351..372 e-value: 2000.0 score: 5.1
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 120..433 e-value: 5.5E-89 score: 298.4 coord: 453..506 e-value: 2.9E-6 score: 26.6
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 298..311
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 82..452 e-value: 8.3E-108 score: 363.0 coord: 453..526 e-value: 3.3E-6 score: 28.3
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 450..520
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 2..452 coord: 450..520
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 2..452
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 87..458
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 454..525

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G06100.2	Clc09G06100.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity