Clc09G06030 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAGGCCTCCAATTTAAGCTCCCTCTCCACTTCTCCTCCTTCCCCAACCGATCATATCAATGCCGTCCGACCAAGAAAAATGGAGCTTTCACCTCGAGAAACCAGACACACCATCCAACAAGAAGCATGTCGTCGAAAACGACAGCGTATTACGGTTGGTCGCATGGGGTGGAGCCTTTGCTTTTGCTTGTTCACTCGTATTAGCTTCGACATTCAAGAGGATCAAGAAGAATGTATCCCCTAAAAGGAGTGGAGAGGGTGAGTCGGATCTTGACGTTGGTGGTTTTGGAGAAAGTACTACCCAAGACGCCGACGCTATAGCTCGACAAATGGAAGGACTGCGGCTTCTTCTTCACTCTTCATCGAGTAATATCAACAGTCTTTCATGGTTAGAACTATTTCTCGTTTAGTGTGTGAAATGCGTATACACATTCCCTTTCACATTTTGTTTTAGTTAATTAACCTCTTCGCTTATATATTTTATTTAAGGTAATTGTTTCAAAAAGCAAAATAAATGTTACTGTTTATTTATTAATGATACACATTGATAGATGTTAGTAGTCTATCATCATCGTCTATCGTTGATAAACCATTACTTCTGCTATATTTAAAAACAACCCTACTTTTATTTAGTTATTTAATGTTTTTCTTTAGGTAAAATTGATTTTTATAATCTATACTTTTATGATTGAATTAATTAAAACTCTAAACTAATAATTATATCAATTAAAACTCATACACTATCCGTGTTGGTGATTCTTCATAACTGTTTTCACTTGATGATTTCATTCAAAATAAACTACACACAAAAGTTATTTAAGCCATGTTTGGTAACCATTTTGTTTTTTATTTTTATTTTATTTTTTTAAAATTAAGCCTATAAACATCTCATCCATCTTTAATTTTTTTTTTTGTTTTGTTATCTATTTTTTTGCCAATGTTTTAAAAAAAAAAACCAAGTCAAATTTTAAAACTAAAAAAAAAAAGTAGTTTTTGAAAATTTGTTTTTGCTTTTGAAAAATTTGGTTAAGAATTTAACTCTTATACTTAAGAAATATGCAAATGATTGTAAGTAAATAAGAAAAATTAGGCTTAATTTTCAAAAACCAAAAATAAAAAACAACAACGACAAAATTTTCTCTAGCCAATAGCCAAAATCCTACTAAAAGTAACCAAAAAAAATTATGGTGTAATTCTTTTCAAATAAGTGAAAAAACATGTAGGAAGAAGAGAGAGGATGAAAAAACTATTCATATGCTTAATATTCTCTAGTATTAATTTCATGTTGAACAAGTTTTAAACACGCGAGAGAATTATATATATGTTATAAACAATTTAAAAAAGAAATACTAGTTCCGATGTTTAATAATTTGATGGGTATGAAATTTTTACCATGATGGTTCAATGCCAAGTAGTCAACTTAATTATATTTGTTGAACTATAAAAACAATATATATATTATATTGTAATAATAATGATTCATTTTTATTGTTACTCATCTTTTGATATATATTATATTTTGTAGCCACACAACGTCGGAAATGTTGGTGAAATATACTTCAATTGAAGTCTCTGAAGATGAAAATCGACCGCTTACAACGGAACCTATCTTAGAAAAGAAAGAGGAAGAAAATATTGGGGTTATTATTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTACACAGATTTACAAAAATATGACGAAAGCTCAAAAGTTGTAGAAAGTTCTTCATCTACAGGATTTGATGAAACTTGGCTCGCAGACTGGAAATATTAACCATCAACATCATCTTCCTCGTCCTTCTCCGAAGAAACTTCTTCATCTAGTGGAAATATTTTGCAACAGATCGATTATGGAGATGACAAAAATATCAATATCGTTATATATATTGATGACGATGATGAGAACATGCTCACATAGTTTGATATGTCGAAGAATCTCCATT AAAAAAGGCCTCCAATTTAAGCTCCCTCTCCACTTCTCCTCCTTCCCCAACCGATCATATCAATGCCGTCCGACCAAGAAAAATGGAGCTTTCACCTCGAGAAACCAGACACACCATCCAACAAGAAGCATGTCGTCGAAAACGACAGCGTATTACGGTTGGTCGCATGGGGTGGAGCCTTTGCTTTTGCTTGTTCACTCGTATTAGCTTCGACATTCAAGAGGATCAAGAAGAATGTATCCCCTAAAAGGAGTGGAGAGGGTGAGTCGGATCTTGACGTTGGTGGTTTTGGAGAAAGTACTACCCAAGACGCCGACGCTATAGCTCGACAAATGGAAGGACTGCGGCTTCTTCTTCACTCTTCATCGAGTAATATCAACAGTCTTTCATGCCACACAACGTCGGAAATGTTGGTGAAATATACTTCAATTGAAGTCTCTGAAGATGAAAATCGACCGCTTACAACGGAACCTATCTTAGAAAAGAAAGAGGAAGAAAATATTGGGGTTATTATTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTACACAGATTTACAAAAATATGACGAAAGCTCAAAAGTTGTAGAAAGTTCTTCATCTACAGGATTTGATGAAACTTGGCTCGCAGACTGGAAATATTAACCATCAACATCATCTTCCTCGTCCTTCTCCGAAGAAACTTCTTCATCTAGTGGAAATATTTTGCAACAGATCGATTATGGAGATGACAAAAATATCAATATCGTTATATATATTGATGACGATGATGAGAACATGCTCACATAGTTTGATATGTCGAAGAATCTCCATT ATGCCGTCCGACCAAGAAAAATGGAGCTTTCACCTCGAGAAACCAGACACACCATCCAACAAGAAGCATGTCGTCGAAAACGACAGCGTATTACGGTTGGTCGCATGGGGTGGAGCCTTTGCTTTTGCTTGTTCACTCGTATTAGCTTCGACATTCAAGAGGATCAAGAAGAATGTATCCCCTAAAAGGAGTGGAGAGGGTGAGTCGGATCTTGACGTTGGTGGTTTTGGAGAAAGTACTACCCAAGACGCCGACGCTATAGCTCGACAAATGGAAGGACTGCGGCTTCTTCTTCACTCTTCATCGAGTAATATCAACAGTCTTTCATGCCACACAACGTCGGAAATGTTGGTGAAATATACTTCAATTGAAGTCTCTGAAGATGAAAATCGACCGCTTACAACGGAACCTATCTTAGAAAAGAAAGAGGAAGAAAATATTGGGGTTATTATTTATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTACACAGATTTACAAAAATATGACGAAAGCTCAAAAGTTGTAGAAAGTTCTTCATCTACAGGATTTGATGAAACTTGGCTCGCAGACTGGAAATATTAA MPSDQEKWSFHLEKPDTPSNKKHVVENDSVLRLVAWGGAFAFACSLVLASTFKRIKKNVSPKRSGEGESDLDVGGFGESTTQDADAIARQMEGLRLLLHSSSSNINSLSCHTTSEMLVKYTSIEVSEDENRPLTTEPILEKKEEENIGVIIYEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEYTDLQKYDESSKVVESSSSTGFDETWLADWKY Homology
BLAST of Clc09G06030 vs. NCBI nr
Match: XP_038899634.1 (uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida]) HSP 1 Score: 181.8 bits (460), Expect = 6.2e-42 Identity = 126/219 (57.53%), Postives = 147/219 (67.12%), Query Frame = 0
BLAST of Clc09G06030 vs. NCBI nr
Match: XP_008451548.1 (PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]) HSP 1 Score: 138.7 bits (348), Expect = 6.1e-29 Identity = 116/213 (54.46%), Postives = 136/213 (63.85%), Query Frame = 0
BLAST of Clc09G06030 vs. NCBI nr
Match: XP_031744420.1 (putative uncharacterized protein DDB_G0281733 [Cucumis sativus] >KAE8646347.1 hypothetical protein Csa_016596 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 8.7e-28 Identity = 112/206 (54.37%), Postives = 142/206 (68.93%), Query Frame = 0
BLAST of Clc09G06030 vs. NCBI nr
Match: KAA0067974.1 (uncharacterized protein E6C27_scaffold138G001610 [Cucumis melo var. makuwa] >TYK18149.1 uncharacterized protein E5676_scaffold411G00810 [Cucumis melo var. makuwa]) HSP 1 Score: 108.2 bits (269), Expect = 8.8e-20 Identity = 66/113 (58.41%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Clc09G06030 vs. NCBI nr
Match: KAG7014352.1 (hypothetical protein SDJN02_24529, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 68.9 bits (167), Expect = 5.9e-08 Identity = 87/209 (41.63%), Postives = 118/209 (56.46%), Query Frame = 0
BLAST of Clc09G06030 vs. ExPASy TrEMBL
Match: A0A1S3BRP4 (uncharacterized protein LOC103492795 OS=Cucumis melo OX=3656 GN=LOC103492795 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 2.9e-29 Identity = 116/213 (54.46%), Postives = 136/213 (63.85%), Query Frame = 0
BLAST of Clc09G06030 vs. ExPASy TrEMBL
Match: A0A0A0K656 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398200 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 4.2e-28 Identity = 112/206 (54.37%), Postives = 142/206 (68.93%), Query Frame = 0
BLAST of Clc09G06030 vs. ExPASy TrEMBL
Match: A0A5A7VKM4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00810 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 4.2e-20 Identity = 66/113 (58.41%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Clc09G06030 vs. ExPASy TrEMBL
Match: A0A6J1GP08 (uncharacterized protein LOC111456164 OS=Cucurbita moschata OX=3662 GN=LOC111456164 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 86/205 (41.95%), Postives = 119/205 (58.05%), Query Frame = 0
BLAST of Clc09G06030 vs. ExPASy TrEMBL
Match: A0A6J1JQ73 (uncharacterized protein LOC111487956 OS=Cucurbita maxima OX=3661 GN=LOC111487956 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 3.9e-05 Identity = 84/209 (40.19%), Postives = 114/209 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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