Clc09G06010 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G06010
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionlarge ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like
LocationClcChr09: 4722882 .. 4725328 (+)
RNA-Seq ExpressionClc09G06010
SyntenyClc09G06010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGCTAAAGCCACGGATAGAGTTTTTCTGCACAGCGTCACCAAAATTTCTACCATTTTCGCTAACTCAGGTACCTTTCTTATCTCCTACGCTTTTTACCCCCTTCCGTTTTCTCTGTTCTTGTATACTTCTTTCCATAATCTATTTCATGCATCTGGAATTTCTTGCGCAGTTGATCTTCGGATTGGGTCACAAACTGTTTGAAGAAATGCCCAACTGAATTACCCAGTTAACTTGTTTGGATTTTAATCTGGCCTAGTTTCTTTGATGTTCTTGTAGGATGGAATCATTTTTGCTCGACTTCATTAGCTGATTAGTACATATATATTGCAGAGCTTGCGTTATTTGTATCTAGGGATATTCCCTTATCCAATTTCTTTGTGCAGTATTTAAGATGTCAGCCACATTCCCCACATCATCCTTAGTTTCATCTTCTCATTCCAACGAATTTATTAAGGTTCTCTACTTGAAATCCAAAGGGAATGTTTCTTTCCATTCGCATTTCCGAGTTCCATGGAAATTTATGAGATATATTCAGCCAAGCTTGGGAGACCCATGTATTAAGCTGAAATCTACTTCCATAAAGTGTGTGAAACCTACTTATCAATCCCTTTTTGAGGACGATTCAGTAATTACTGATTGGGTGGATCAAGAAGGGGATATTGAGGAGATGGGATCACCTTGGGAAGGAGCAGTTATTTACCAGAGGAACTCTTCAGTTTCTCATGTGGAGTATTGTACAACATTAGAGAGGCTTGGATTAGAGAAGCTTTCAACTGATGTCTCGAAATCTAGAGCATCAACGATGGGTCTACGCGTAACGAAGGCTGTGAGAGATTATCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACAAGGAAAGAAAAAAAGTTAAGGCTGGATGGGATAGTTAAAACTGTCATCACTCTCAATTGTTATAGGTATTCTAATTACCAATTAGCTCCCTATACAACATTTCTATTTGATTGTTTTCAGACAACTAGAGCATACTATACTACACACTGAAATGCTAATCATTTTTGTTCTCTCAACAGGAATTTTAGCGAATAAGGAAGTTTCTTCTATTCTATGTTTTGCATAGGTTTACTACTCACCTGCTGAAACCTTCCTTCCATAGCTGATTGTTGGTTGGATGGTCACTCGATACACATTTTTTTTGTATGTGCCAAAAGAAAGAAAAGATATATTATTATTCACAATATTTTTCCTTGTATAATTTGTGCTTCGAAAAAGTACATTATAAGAAAAAATACCACTTAAATTTGCCATTTGTTTAAGAGAAACCCTTATTATTTTAAAAGCTTAAATATTGTCATTGAAATTTCATAAACATTTCAAAACTATCATTAGAGTAGAAATCTTTTAAAATTTTGGACAGAAATTTGAGACCTTGAATATTGTGGCGATGACCTAAAACCGAAATATGGATCGCCATTTGTTCTAAGTCATTGCCACACTGTTCTAGGTCTTTAACTTTTGTCAAAATTGTAAAAGATTTTTACTCCAAGAGTAGTTGAAATGCTTAGAAGAGGTGAAGGTTAATATTGCAACTTTTAAATGAATATGAGTAGTTTTAAAACAAAAGATAAAATTTAGGGTGTTTTTGATAATTTAACCTAATAAAAAGTAGCCACACTACCTACTCAAGCTACTCAATGTCTGCGTTAGATTGCCTTCTAATTGATTTCAACAGTTTTTACTTAACAACTACAAACAAGCCTAGTTATTTTGGTTGTTTCTCACTTCTCACATCAATTGAGATGAAATATTTGCTTTCTCTGTTTTCTCCTCTTACCCCTCCATATCAATTTACTTCCTTGTTTAGCATGTTCATGTAGTTTATCATGGGGAAAAAAAAAAAAAAAAAGAAAAGAAAAGAAAAAGAAAAAATAATCCACATCCGGTAGATACGATGAATGTAGACTCATAAATTTGTTCTGTACCATTTATGCTATTATCAATGAGGTTCATAACATGCAAATCACTTTATGTTGCAGGTGCTGTGAACCTGCTCCTGAATGCGTTTTCTCAAATTTCTCCATTGTACTAAGCGAAGAACCGATTGAAGAACCTGATGTCATAAATATGGGAATCATTAATGGGCAGGATATGTTCAAGACGTATGATGGAAATAGTGATGAAGATGATGAAGAGTTGTTTGATTTGGATGATCAACTCTATTTTCCTCTTGTAGAGAAAGAAATAGATATATCAAAGAACATCAGAGACATCTTGCATCTGGAAATTACTATGAATGCAATATGTGATCCGGGATGCAAAGGTATGTGTCTGAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAAAATGATTTTGGTCCTCTTGGAAATTTGAGAAGGCAAATGCAAAAAAATTCTAAGACTTAGAATGCAAG

mRNA sequence

ATGTCGCTAAAGCCACGGATAGAGTTTTTCTGCACAGCGTCACCAAAATTTCTACCATTTTCGCTAACTCAGGGATATTCCCTTATCCAATTTCTTTGTGCAGTATTTAAGATGTCAGCCACATTCCCCACATCATCCTTAGTTTCATCTTCTCATTCCAACGAATTTATTAAGGTTCTCTACTTGAAATCCAAAGGGAATGTTTCTTTCCATTCGCATTTCCGAGTTCCATGGAAATTTATGAGATATATTCAGCCAAGCTTGGGAGACCCATGTATTAAGCTGAAATCTACTTCCATAAAGTGTGTGAAACCTACTTATCAATCCCTTTTTGAGGACGATTCAGTAATTACTGATTGGGTGGATCAAGAAGGGGATATTGAGGAGATGGGATCACCTTGGGAAGGAGCAGTTATTTACCAGAGGAACTCTTCAGTTTCTCATGTGGAGTATTGTACAACATTAGAGAGGCTTGGATTAGAGAAGCTTTCAACTGATGTCTCGAAATCTAGAGCATCAACGATGGGTCTACGCGTAACGAAGGCTGTGAGAGATTATCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACAAGGAAAGAAAAAAAGTTAAGGCTGGATGGGATAGTTAAAACTGTCATCACTCTCAATTGTTATAGGTGCTGTGAACCTGCTCCTGAATGCGTTTTCTCAAATTTCTCCATTGTACTAAGCGAAGAACCGATTGAAGAACCTGATGTCATAAATATGGGAATCATTAATGGGCAGGATATGTTCAAGACGTATGATGGAAATAGTGATGAAGATGATGAAGAGTTGTTTGATTTGGATGATCAACTCTATTTTCCTCTTGTAGAGAAAGAAATAGATATATCAAAGAACATCAGAGACATCTTGCATCTGGAAATTACTATGAATGCAATATGTGATCCGGGATGCAAAGGTATGTGTCTGAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAAAATGATTTTGGTCCTCTTGGAAATTTGAGAAGGCAAATGCAAAAAAATTCTAAGACTTAGAATGCAAG

Coding sequence (CDS)

ATGTCGCTAAAGCCACGGATAGAGTTTTTCTGCACAGCGTCACCAAAATTTCTACCATTTTCGCTAACTCAGGGATATTCCCTTATCCAATTTCTTTGTGCAGTATTTAAGATGTCAGCCACATTCCCCACATCATCCTTAGTTTCATCTTCTCATTCCAACGAATTTATTAAGGTTCTCTACTTGAAATCCAAAGGGAATGTTTCTTTCCATTCGCATTTCCGAGTTCCATGGAAATTTATGAGATATATTCAGCCAAGCTTGGGAGACCCATGTATTAAGCTGAAATCTACTTCCATAAAGTGTGTGAAACCTACTTATCAATCCCTTTTTGAGGACGATTCAGTAATTACTGATTGGGTGGATCAAGAAGGGGATATTGAGGAGATGGGATCACCTTGGGAAGGAGCAGTTATTTACCAGAGGAACTCTTCAGTTTCTCATGTGGAGTATTGTACAACATTAGAGAGGCTTGGATTAGAGAAGCTTTCAACTGATGTCTCGAAATCTAGAGCATCAACGATGGGTCTACGCGTAACGAAGGCTGTGAGAGATTATCCCTTTGGAACGCCTGTTCAAATCTCTGTTGATGTTACAAGGAAAGAAAAAAAGTTAAGGCTGGATGGGATAGTTAAAACTGTCATCACTCTCAATTGTTATAGGTGCTGTGAACCTGCTCCTGAATGCGTTTTCTCAAATTTCTCCATTGTACTAAGCGAAGAACCGATTGAAGAACCTGATGTCATAAATATGGGAATCATTAATGGGCAGGATATGTTCAAGACGTATGATGGAAATAGTGATGAAGATGATGAAGAGTTGTTTGATTTGGATGATCAACTCTATTTTCCTCTTGTAGAGAAAGAAATAGATATATCAAAGAACATCAGAGACATCTTGCATCTGGAAATTACTATGAATGCAATATGTGATCCGGGATGCAAAGGTATGTGTCTGAATTGTGGTATAAATTTGAATACTGGAAGCTGTAACTGTAGTAAGCAGGCTGTAAAGAAAAATGATTTTGGTCCTCTTGGAAATTTGAGAAGGCAAATGCAAAAAAATTCTAAGACTTAG

Protein sequence

MSLKPRIEFFCTASPKFLPFSLTQGYSLIQFLCAVFKMSATFPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIKCVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLRRQMQKNSKT
Homology
BLAST of Clc09G06010 vs. NCBI nr
Match: XP_008451552.1 (PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo])

HSP 1 Score: 602.8 bits (1553), Expect = 1.9e-168
Identity = 301/358 (84.08%), Postives = 321/358 (89.66%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGYSLI--------QFLCAVFKMSATFPTSSLVSSSHSNEFIK 66
           I+FF  AS KF PFS T G  L          F    FKM ATFPTSS+VSSSHS EFI 
Sbjct: 14  IKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFIN 73

Query: 67  VLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIKCVKPTYQSLFEDDSVIT 126
           V Y +SKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIKCVKPTYQSLFED+S+IT
Sbjct: 74  VFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIIT 133

Query: 127 DWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 186
           DW DQEGDIEEM SPWEGAVIY+RNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR
Sbjct: 134 DWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 193

Query: 187 VTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSIVL 246
           VTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYRCCEPAPEC+FSNFSI+L
Sbjct: 194 VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILL 253

Query: 247 SEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEKEIDISKNIRD 306
           SEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQLYFP V+KEIDISKNIRD
Sbjct: 254 SEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRD 313

Query: 307 ILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLRRQMQKNS 357
           ILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNL+R+MQ NS
Sbjct: 314 ILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS 371

BLAST of Clc09G06010 vs. NCBI nr
Match: KAA0067976.1 (uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa])

HSP 1 Score: 601.7 bits (1550), Expect = 4.2e-168
Identity = 304/375 (81.07%), Postives = 325/375 (86.67%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGY---------SLIQFLCAV----------------FKMSAT 66
           I+FF  AS KF PFS T G+           I+F   V                FKM AT
Sbjct: 14  IKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLAT 73

Query: 67  FPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIK 126
           FPTSS+VSSSHS EFI V Y KSKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIK
Sbjct: 74  FPTSSVVSSSHSKEFINVFYFKSKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIK 133

Query: 127 CVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLE 186
           CVKPTYQSLFED+S+ITDW DQEGDIEEMGSPWEGAVIY+RNSSVSHVEYCTTLERLGLE
Sbjct: 134 CVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLE 193

Query: 187 KLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYR 246
           KLSTDVSKSRASTMGLRVTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYR
Sbjct: 194 KLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYR 253

Query: 247 CCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQL 306
           CCEPAPEC+FSNFSI+LSEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQL
Sbjct: 254 CCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQL 313

Query: 307 YFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKND 357
           YFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKND
Sbjct: 314 YFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKND 373

BLAST of Clc09G06010 vs. NCBI nr
Match: XP_038897008.1 (large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 599.4 bits (1544), Expect = 2.1e-167
Identity = 295/320 (92.19%), Postives = 307/320 (95.94%), Query Frame = 0

Query: 38  MSATFPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKS 97
           MSATFPTSS+VSSSHSNEFIKV YLKSKGNVSF SH RVPWKFMR IQPSLGD CI LKS
Sbjct: 1   MSATFPTSSVVSSSHSNEFIKVFYLKSKGNVSFDSHCRVPWKFMRNIQPSLGDSCIMLKS 60

Query: 98  TSIKCVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLER 157
           TSIKCVKPTYQSLFED+S+ITDW D +GDIEEMGSPWEGAVIY+RNSSVSHVEYCTTLER
Sbjct: 61  TSIKCVKPTYQSLFEDNSIITDWED-KGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLER 120

Query: 158 LGLEKLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITL 217
           LGLEKLSTDVSKSRAS MGLRV K V+DYPFGTPVQISVDVTRKEKKLRLDGIVKTVITL
Sbjct: 121 LGLEKLSTDVSKSRASAMGLRVRKVVKDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITL 180

Query: 218 NCYRCCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDL 277
           NCYRCCE APEC+FSNFSI+LSEEPIEEPDVINMGII+GQDMFKTYDGNSDEDDEEL DL
Sbjct: 181 NCYRCCELAPECIFSNFSIILSEEPIEEPDVINMGIISGQDMFKTYDGNSDEDDEELVDL 240

Query: 278 DDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV 337
           DDQLYFPL+EKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV
Sbjct: 241 DDQLYFPLIEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV 300

Query: 338 KKNDFGPLGNLRRQMQKNSK 358
           KKNDFGPLGNL++QMQKNSK
Sbjct: 301 KKNDFGPLGNLKKQMQKNSK 319

BLAST of Clc09G06010 vs. NCBI nr
Match: TYK18147.1 (uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa])

HSP 1 Score: 598.6 bits (1542), Expect = 3.6e-167
Identity = 300/358 (83.80%), Postives = 319/358 (89.11%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGYSLI--------QFLCAVFKMSATFPTSSLVSSSHSNEFIK 66
           I+FF  AS KF PFS T G  L          F    FKM ATFPTSS+VSSSHS EFI 
Sbjct: 14  IKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFIN 73

Query: 67  VLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIKCVKPTYQSLFEDDSVIT 126
           V Y KSKGNVSF+S  R PW+FMR IQPSLGDPCIK+KSTSIKCVKPTYQSLFED+S+IT
Sbjct: 74  VFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIIT 133

Query: 127 DWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 186
           DW DQEGDIEEMGSPWEGAVIY+RNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR
Sbjct: 134 DWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 193

Query: 187 VTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSIVL 246
           VTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYRCCEPAPEC+FSNFSI+L
Sbjct: 194 VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILL 253

Query: 247 SEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEKEIDISKNIRD 306
           SEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQLYFP V+KEIDISKNIRD
Sbjct: 254 SEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRD 313

Query: 307 ILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLRRQMQKNS 357
           ILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNL+R+MQ NS
Sbjct: 314 ILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS 371

BLAST of Clc09G06010 vs. NCBI nr
Match: XP_008451550.1 (PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo])

HSP 1 Score: 597.8 bits (1540), Expect = 6.1e-167
Identity = 302/375 (80.53%), Postives = 324/375 (86.40%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGY---------SLIQFLCAV----------------FKMSAT 66
           I+FF  AS KF PFS T G+           I+F   V                FKM AT
Sbjct: 14  IKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLAT 73

Query: 67  FPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIK 126
           FPTSS+VSSSHS EFI V Y +SKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIK
Sbjct: 74  FPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIK 133

Query: 127 CVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLE 186
           CVKPTYQSLFED+S+ITDW DQEGDIEEM SPWEGAVIY+RNSSVSHVEYCTTLERLGLE
Sbjct: 134 CVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLE 193

Query: 187 KLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYR 246
           KLSTDVSKSRASTMGLRVTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYR
Sbjct: 194 KLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYR 253

Query: 247 CCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQL 306
           CCEPAPEC+FSNFSI+LSEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQL
Sbjct: 254 CCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQL 313

Query: 307 YFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKND 357
           YFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKND
Sbjct: 314 YFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKND 373

BLAST of Clc09G06010 vs. ExPASy Swiss-Prot
Match: Q9LT27 (Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g19810 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 9.7e-83
Identity = 157/262 (59.92%), Postives = 198/262 (75.57%), Query Frame = 0

Query: 93  IKLKSTSIKCVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYC 152
           IKL   +   +  + +S  E  ++  DW DQE +IE+ GSPWEG+V+Y+RN+SV+HVEYC
Sbjct: 58  IKLPRLAKSRILVSQESFTETSTIDMDWEDQE-EIEDTGSPWEGSVMYRRNASVTHVEYC 117

Query: 153 TTLERLGLEKLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVK 212
           TTLERLGL +LSTDVSK RAS MGLRVTK V+DYP GTPVQ+SVDV RK+KKLRLDGIV+
Sbjct: 118 TTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVR 177

Query: 213 TVITLNCYRCCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDE 272
           TVITL C RC E   E +FSNFS++L+EEP+EEPDVI++G   G D  K    + D++D+
Sbjct: 178 TVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGND--KEEGEDDDDNDD 237

Query: 273 ELFDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNC 332
              D +D+L+FP   KEIDISK+IRD++HLEIT+ AICD  CKGMCL CG NLN   C+C
Sbjct: 238 SWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDC 297

Query: 333 SKQAVKKNDFGPLGNLRRQMQK 355
            ++  K   +GPLGNLR QMQ+
Sbjct: 298 GREE-KDKGYGPLGNLREQMQQ 315

BLAST of Clc09G06010 vs. ExPASy Swiss-Prot
Match: A0A1D6HQ92 (Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Zea mays OX=4577 GN=GRMZM2G433025 PE=2 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.7e-53
Identity = 116/231 (50.22%), Postives = 160/231 (69.26%), Query Frame = 0

Query: 121 VDQEGDIEEMG--SPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 180
           V+ E D  + G  SPWEGAV+Y+R+++V H+EY +TLERLGL  LS+  S++RA+ +GL 
Sbjct: 63  VEPEPDSIDDGLPSPWEGAVVYRRDAAVQHLEYASTLERLGLGDLSSPDSRARAADLGLA 122

Query: 181 --VTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSI 240
                +    P  TPV +SVDVTR+  +LRLDGIV+TVITL C+RC EPAP+ +F+NFS+
Sbjct: 123 GGTLDSTGAQP-RTPVLVSVDVTRRRGRLRLDGIVRTVITLGCFRCAEPAPQGIFANFSL 182

Query: 241 VLSEEPI-EEPDVINMGII-------NGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEK 300
           +L+E+P+ EEPD   +G I        G  +    DG+ D       D DD+L+FP  +K
Sbjct: 183 LLTEDPVEEEPD---LGTIFQEDDDKGGASLACAMDGDQD------IDWDDRLHFPAADK 242

Query: 301 EIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLN-TGSCNCSKQAVK 339
           EIDISK+IRD++HLEIT++A+C+P CKG+CL CG NLN T SC C  + V+
Sbjct: 243 EIDISKHIRDMIHLEITLDAVCNPNCKGLCLTCGANLNTTSSCTCKPRNVQ 283

BLAST of Clc09G06010 vs. ExPASy TrEMBL
Match: A0A1S3BR50 (uncharacterized protein LOC103492797 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492797 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 9.2e-169
Identity = 301/358 (84.08%), Postives = 321/358 (89.66%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGYSLI--------QFLCAVFKMSATFPTSSLVSSSHSNEFIK 66
           I+FF  AS KF PFS T G  L          F    FKM ATFPTSS+VSSSHS EFI 
Sbjct: 14  IKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFIN 73

Query: 67  VLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIKCVKPTYQSLFEDDSVIT 126
           V Y +SKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIKCVKPTYQSLFED+S+IT
Sbjct: 74  VFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIIT 133

Query: 127 DWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 186
           DW DQEGDIEEM SPWEGAVIY+RNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR
Sbjct: 134 DWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 193

Query: 187 VTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSIVL 246
           VTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYRCCEPAPEC+FSNFSI+L
Sbjct: 194 VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILL 253

Query: 247 SEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEKEIDISKNIRD 306
           SEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQLYFP V+KEIDISKNIRD
Sbjct: 254 SEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRD 313

Query: 307 ILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLRRQMQKNS 357
           ILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNL+R+MQ NS
Sbjct: 314 ILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS 371

BLAST of Clc09G06010 vs. ExPASy TrEMBL
Match: A0A5A7VN29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001640 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 2.0e-168
Identity = 304/375 (81.07%), Postives = 325/375 (86.67%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGY---------SLIQFLCAV----------------FKMSAT 66
           I+FF  AS KF PFS T G+           I+F   V                FKM AT
Sbjct: 14  IKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLAT 73

Query: 67  FPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIK 126
           FPTSS+VSSSHS EFI V Y KSKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIK
Sbjct: 74  FPTSSVVSSSHSKEFINVFYFKSKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIK 133

Query: 127 CVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLE 186
           CVKPTYQSLFED+S+ITDW DQEGDIEEMGSPWEGAVIY+RNSSVSHVEYCTTLERLGLE
Sbjct: 134 CVKPTYQSLFEDNSIITDWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLE 193

Query: 187 KLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYR 246
           KLSTDVSKSRASTMGLRVTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYR
Sbjct: 194 KLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYR 253

Query: 247 CCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQL 306
           CCEPAPEC+FSNFSI+LSEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQL
Sbjct: 254 CCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQL 313

Query: 307 YFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKND 357
           YFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKND
Sbjct: 314 YFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKND 373

BLAST of Clc09G06010 vs. ExPASy TrEMBL
Match: A0A5D3D2J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00780 PE=4 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.7e-167
Identity = 300/358 (83.80%), Postives = 319/358 (89.11%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGYSLI--------QFLCAVFKMSATFPTSSLVSSSHSNEFIK 66
           I+FF  AS KF PFS T G  L          F    FKM ATFPTSS+VSSSHS EFI 
Sbjct: 14  IKFFRGASSKFPPFSRTSGTVLFVSTEIPLPTFCPHSFKMLATFPTSSVVSSSHSKEFIN 73

Query: 67  VLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIKCVKPTYQSLFEDDSVIT 126
           V Y KSKGNVSF+S  R PW+FMR IQPSLGDPCIK+KSTSIKCVKPTYQSLFED+S+IT
Sbjct: 74  VFYFKSKGNVSFNSLLRAPWRFMRNIQPSLGDPCIKMKSTSIKCVKPTYQSLFEDNSIIT 133

Query: 127 DWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 186
           DW DQEGDIEEMGSPWEGAVIY+RNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR
Sbjct: 134 DWGDQEGDIEEMGSPWEGAVIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 193

Query: 187 VTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYRCCEPAPECVFSNFSIVL 246
           VTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYRCCEPAPEC+FSNFSI+L
Sbjct: 194 VTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYRCCEPAPECIFSNFSILL 253

Query: 247 SEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQLYFPLVEKEIDISKNIRD 306
           SEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQLYFP V+KEIDISKNIRD
Sbjct: 254 SEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQLYFPPVDKEIDISKNIRD 313

Query: 307 ILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLRRQMQKNS 357
           ILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNL+R+MQ NS
Sbjct: 314 ILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKNDFGPLGNLKRRMQNNS 371

BLAST of Clc09G06010 vs. ExPASy TrEMBL
Match: A0A1S3BSU8 (uncharacterized protein LOC103492797 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492797 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 3.0e-167
Identity = 302/375 (80.53%), Postives = 324/375 (86.40%), Query Frame = 0

Query: 7   IEFFCTASPKFLPFSLTQGY---------SLIQFLCAV----------------FKMSAT 66
           I+FF  AS KF PFS T G+           I+F   V                FKM AT
Sbjct: 14  IKFFRGASSKFPPFSRTSGWDSFRLTSLADYIKFAGTVLFVSTEIPLPTFCPHSFKMLAT 73

Query: 67  FPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKSTSIK 126
           FPTSS+VSSSHS EFI V Y +SKGNVSF+SHFRVPW+FMR IQPSLGDPCIK+KSTSIK
Sbjct: 74  FPTSSVVSSSHSKEFINVFYFESKGNVSFNSHFRVPWRFMRNIQPSLGDPCIKMKSTSIK 133

Query: 127 CVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLERLGLE 186
           CVKPTYQSLFED+S+ITDW DQEGDIEEM SPWEGAVIY+RNSSVSHVEYCTTLERLGLE
Sbjct: 134 CVKPTYQSLFEDNSIITDWGDQEGDIEEMSSPWEGAVIYKRNSSVSHVEYCTTLERLGLE 193

Query: 187 KLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITLNCYR 246
           KLSTDVSKSRASTMGLRVTK V+DYPFGTPVQISVDVTRK+KKLRLDGIVKTVITLNCYR
Sbjct: 194 KLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKDKKLRLDGIVKTVITLNCYR 253

Query: 247 CCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDLDDQL 306
           CCEPAPEC+FSNFSI+LSEEPIEEPDVINMGII+GQD+FKT +GNSDEDDEE  DLDDQL
Sbjct: 254 CCEPAPECIFSNFSILLSEEPIEEPDVINMGIISGQDIFKTDNGNSDEDDEESVDLDDQL 313

Query: 307 YFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAVKKND 357
           YFP V+KEIDISKNIRDILHLEITMN IC+PGCKGMCLNCGINLNTGSCNCSKQAVKKND
Sbjct: 314 YFPPVDKEIDISKNIRDILHLEITMNVICNPGCKGMCLNCGINLNTGSCNCSKQAVKKND 373

BLAST of Clc09G06010 vs. ExPASy TrEMBL
Match: A0A0A0KAY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398180 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 5.4e-161
Identity = 279/319 (87.46%), Postives = 299/319 (93.73%), Query Frame = 0

Query: 38  MSATFPTSSLVSSSHSNEFIKVLYLKSKGNVSFHSHFRVPWKFMRYIQPSLGDPCIKLKS 97
           M ATFPTSS+VSSSHSNEFI V Y KSKG VSF SHFRVPW+ +R IQPSLGDPCIK+KS
Sbjct: 1   MLATFPTSSVVSSSHSNEFINVFYFKSKGTVSFDSHFRVPWRLVRNIQPSLGDPCIKMKS 60

Query: 98  TSIKCVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYCTTLER 157
           T+IKCVKPTYQSLFED+S+ITDW DQEGDIEEM SPWEGA+IY+RNSSVSHVEYCTTLER
Sbjct: 61  TAIKCVKPTYQSLFEDNSIITDWEDQEGDIEEMDSPWEGAIIYKRNSSVSHVEYCTTLER 120

Query: 158 LGLEKLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVKTVITL 217
           LGLEKLSTDVSKSRASTMGLRVTK V+DYPFGTPVQISVDVTRK KKLRLDGIVKTVITL
Sbjct: 121 LGLEKLSTDVSKSRASTMGLRVTKDVKDYPFGTPVQISVDVTRKNKKLRLDGIVKTVITL 180

Query: 218 NCYRCCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDEELFDL 277
           NCY CCEPAPEC+FSNFSI+LSEEPIEEPDVINMGII+G+DMFKT +GNSDEDDEEL DL
Sbjct: 181 NCYSCCEPAPECIFSNFSIILSEEPIEEPDVINMGIISGKDMFKTDNGNSDEDDEELIDL 240

Query: 278 DDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNCSKQAV 337
           DDQLYFP + KEIDISKNIRDILHLEITMN ICDPGCKG+CLNCGINLNTGSC CSKQAV
Sbjct: 241 DDQLYFPPLNKEIDISKNIRDILHLEITMNVICDPGCKGICLNCGINLNTGSCKCSKQAV 300

Query: 338 KKNDFGPLGNLRRQMQKNS 357
           KKNDFGPLG+L+R+MQ NS
Sbjct: 301 KKNDFGPLGDLKRRMQNNS 319

BLAST of Clc09G06010 vs. TAIR 10
Match: AT3G19810.1 (Protein of unknown function (DUF177) )

HSP 1 Score: 308.5 bits (789), Expect = 6.9e-84
Identity = 157/262 (59.92%), Postives = 198/262 (75.57%), Query Frame = 0

Query: 93  IKLKSTSIKCVKPTYQSLFEDDSVITDWVDQEGDIEEMGSPWEGAVIYQRNSSVSHVEYC 152
           IKL   +   +  + +S  E  ++  DW DQE +IE+ GSPWEG+V+Y+RN+SV+HVEYC
Sbjct: 58  IKLPRLAKSRILVSQESFTETSTIDMDWEDQE-EIEDTGSPWEGSVMYRRNASVTHVEYC 117

Query: 153 TTLERLGLEKLSTDVSKSRASTMGLRVTKAVRDYPFGTPVQISVDVTRKEKKLRLDGIVK 212
           TTLERLGL +LSTDVSK RAS MGLRVTK V+DYP GTPVQ+SVDV RK+KKLRLDGIV+
Sbjct: 118 TTLERLGLGRLSTDVSKKRASAMGLRVTKDVKDYPDGTPVQVSVDVIRKKKKLRLDGIVR 177

Query: 213 TVITLNCYRCCEPAPECVFSNFSIVLSEEPIEEPDVINMGIINGQDMFKTYDGNSDEDDE 272
           TVITL C RC E   E +FSNFS++L+EEP+EEPDVI++G   G D  K    + D++D+
Sbjct: 178 TVITLGCNRCGESTGESIFSNFSLLLTEEPVEEPDVIDLGFTFGND--KEEGEDDDDNDD 237

Query: 273 ELFDLDDQLYFPLVEKEIDISKNIRDILHLEITMNAICDPGCKGMCLNCGINLNTGSCNC 332
              D +D+L+FP   KEIDISK+IRD++HLEIT+ AICD  CKGMCL CG NLN   C+C
Sbjct: 238 SWIDWEDKLHFPPEVKEIDISKHIRDLVHLEITITAICDSACKGMCLKCGANLNKRKCDC 297

Query: 333 SKQAVKKNDFGPLGNLRRQMQK 355
            ++  K   +GPLGNLR QMQ+
Sbjct: 298 GREE-KDKGYGPLGNLREQMQQ 315

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008451552.11.9e-16884.08PREDICTED: uncharacterized protein LOC103492797 isoform X2 [Cucumis melo][more]
KAA0067976.14.2e-16881.07uncharacterized protein E6C27_scaffold138G001640 [Cucumis melo var. makuwa][more]
XP_038897008.12.1e-16792.19large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic-l... [more]
TYK18147.13.6e-16783.80uncharacterized protein E5676_scaffold411G00780 [Cucumis melo var. makuwa][more]
XP_008451550.16.1e-16780.53PREDICTED: uncharacterized protein LOC103492797 isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Q9LT279.7e-8359.92Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic O... [more]
A0A1D6HQ922.7e-5350.22Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic O... [more]
Match NameE-valueIdentityDescription
A0A1S3BR509.2e-16984.08uncharacterized protein LOC103492797 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7VN292.0e-16881.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3D2J41.7e-16783.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BSU83.0e-16780.53uncharacterized protein LOC103492797 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KAY75.4e-16187.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398180 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G19810.16.9e-8459.92Protein of unknown function (DUF177) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003772Large ribosomal RNA subunit accumulation protein YceDPFAMPF02620YceDcoord: 207..348
e-value: 1.9E-27
score: 95.8
NoneNo IPR availablePANTHERPTHR34374LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 1, CHLOROPLASTICcoord: 93..354

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G06010.2Clc09G06010.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast