Clc09G05660 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G05660
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionGATA transcription factor 15-like
LocationClcChr09: 4472237 .. 4473416 (+)
RNA-Seq ExpressionClc09G05660
SyntenyClc09G05660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAAAACAGAGCTCTTAAGGACACTTTCTTCAAACACCTTCCTTTCTAGTTTGCGATGCTCAAAGCTGAAGTAATTGGTGATCTTGGTTTGGATCCTTCCATCATGGCCTTCCTCATGAACTGCTCTGCCGATCTCTCTGCTTCCACCTTCAACCCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGCCAAGGGTATAGTTACTTCTTCTAATTTCTTCTTCATCTACTAACATTTTCTAAGGGAATTAATGCCACACCAATATCACATGATGCATCACTCTCATCAAACTAAAAATAAGTTATTTGCATTGAAAATATGTAAAATATTTTGAAATATGATTTATCTAATGGTATCACATAGGTTATATATGTGTTGGAATTCTTGATGCCATTTTCCTCATTGGCCAAGTATTATTGGGTTTGGTCTTAGAAAAAAGGTTAATTAAATGCTTCTTACAAATGGGTTTTAGAACTAATTTCAAAATTGTAAATTTGAGAGAGTTTAAGATTAGGATATATATCTAAGTTTCAACCTTATACAATATTAGAAATTGATAAAAATAAAACTTCTCAATAAAAAAATAGTTTAAAGTATTTTTTACTAGCTCTATATATATATTTTATATATAAAATATATATATAGATTGAATGGTTTGAGTTTAGTAACGTTGATTTGAACACTTGATTGTGTTGAGTAATTTCTGGGTTTTTGTTTGGTGACACAGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATAATAATAATAGTAATGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATGTGTGATGTCATTCATATAAACACTGGATTCTAGCTACCACTTTTGGGAATTTACACTTTTTGATTTGTCTCTCTTCATTTTATATGGAAAGAGAGATTTCGAGTTGGACAAATTACAAAATAAATTTTGAAAAAATATATATACAT

mRNA sequence

TTCAAAACAGAGCTCTTAAGGACACTTTCTTCAAACACCTTCCTTTCTAGTTTGCGATGCTCAAAGCTGAAGTAATTGGTGATCTTGGTTTGGATCCTTCCATCATGGCCTTCCTCATGAACTGCTCTGCCGATCTCTCTGCTTCCACCTTCAACCCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGCCAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATAATAATAATAGTAATGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATGTGTGATGTCATTCATATAAACACTGGATTCTAGCTACCACTTTTGGGAATTTACACTTTTTGATTTGTCTCTCTTCATTTTATATGGAAAGAGAGATTTCGAGTTGGACAAATTACAAAATAAATTTTGAAAAAATATATATACAT

Coding sequence (CDS)

ATGCTCAAAGCTGAAGTAATTGGTGATCTTGGTTTGGATCCTTCCATCATGGCCTTCCTCATGAACTGCTCTGCCGATCTCTCTGCTTCCACCTTCAACCCATCTCTAATGCCCGACGCTTCGAAACAGAGTCTGCTCAATATGGAGCCGCAGAAACAGAGGGCCTGCGTCCACTGTCGCACCACCAGAACCCCTCTCTGGAGAGCCGGTCCGGCTGGGCCAAGGTCGCTGTGCAATGCATGTGGGATTCGATACAGGAAGACGAAGAATAATAATAATAATAGTAATGGAGGAGTGAATAATAAGATGGGAAAAGGGAAGAAAGTGGGAGAAGGATCATTGAAGGTGAGAGTGGTGAGCTTAGGAAGAGAAATAGTTGAAGAGGCAATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTCTATCTTCCGGCTATGTGTGA

Protein sequence

MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGEEEQAAAMLLMALSSGYV
Homology
[Close]
BLAST of Clc09G05660 vs. NCBI nr
Match: XP_011659382.1 (GATA transcription factor 15 [Cucumis sativus] >KGN44993.1 hypothetical protein Csa_016706 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 6.9e-48
Identity = 120/170 (70.59%), Postives = 130/170 (76.47%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHC 60
           MLK EVIGD GLD  ++AFLMN +ADLSASTFN PSLM   SK+ LL +E +KQRACVHC
Sbjct: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60

Query: 61  RTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV----NNKMGKGKKVG--EGS 120
           R TRTPLWRAGPAGPRSLCNACGIRYRK K N+NN NGGV    NNKMGKGKK+G   GS
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN-NGGVNNNSNNKMGKGKKMGGSGGS 120

Query: 121 LKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
           LKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Sbjct: 121 LKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]
BLAST of Clc09G05660 vs. NCBI nr
Match: XP_038899958.1 (GATA transcription factor 15-like [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 9.0e-48
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 0 

Query: 17  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRS 76
           MAFL+N  AD SASTF PSLM   SKQSLLN EPQKQRACVHC TTRTPLWRAGPAGPRS
Sbjct: 1   MAFLVNRPADFSASTFTPSLMAAVSKQSLLNREPQKQRACVHCCTTRTPLWRAGPAGPRS 60

Query: 77  LCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGEEEQA 136
           LCNACGIRYRK KNNN+N+N   NNK+GKGKKVG GSLK+RVV L R+IV E IGEEEQA
Sbjct: 61  LCNACGIRYRKMKNNNDNNNNN-NNKIGKGKKVGGGSLKMRVVKLARKIVAEPIGEEEQA 120

Query: 137 AAMLLMALSSGYV 150
           AAMLLMALSS YV
Sbjct: 121 AAMLLMALSSAYV 132

[Close]
BLAST of Clc09G05660 vs. NCBI nr
Match: XP_008451515.1 (PREDICTED: GATA transcription factor 15-like [Cucumis melo])

HSP 1 Score: 191.8 bits (486), Expect = 4.2e-45
Identity = 115/173 (66.47%), Postives = 123/173 (71.10%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCR 60
           MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCR 60

Query: 61  TTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NNNNNSNGGVNNKMGKGKKV-G 120
            TRTPLWRAGPAGPRSLCNACGIRYRK K         NNNNN+N   NNKMGKGKK+ G
Sbjct: 61  ATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGG 120

Query: 121 EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
            GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Sbjct: 121 GGSLKLRVVRLGREIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYV 169

[Close]
BLAST of Clc09G05660 vs. NCBI nr
Match: KAA0046674.1 (GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA transcription factor 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 4.6e-44
Identity = 113/169 (66.86%), Postives = 122/169 (72.19%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCR 60
           MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCR 60

Query: 61  TTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NSNGGVNNKMGKGKKV-GEGSL 120
            TRTPLWRAGPAGPRSLCNACGIRYRK K N+N     N+N   NNKMGKGKK+ G GSL
Sbjct: 61  ATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSL 120

Query: 121 KVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
           K+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Sbjct: 121 KLRVVRLGREIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYV 165

[Close]
BLAST of Clc09G05660 vs. NCBI nr
Match: XP_023004687.1 (GATA transcription factor 15-like [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 3.6e-36
Identity = 98/146 (67.12%), Postives = 101/146 (69.18%), Query Frame = 0 

Query: 17  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRS 76
           MAF +N   DLS STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRS
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPRS 60

Query: 77  LCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV---------- 136
           LCNACGIRYRK KNN    NGGV NK G GKKV      VRVV LGREI+          
Sbjct: 61  LCNACGIRYRKLKNN----NGGV-NKSGNGKKV------VRVVGLGREIMLHRTTAAMAE 120

Query: 137 ---EEAIGEEEQAAAMLLMALSSGYV 150
               E IGEEEQAAAMLLMALSSGYV
Sbjct: 121 NGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 8.9e-14
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 52  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKV 111
           K++ C  C T++TPLWR GP GP+SLCNACGIR RK +      N  +  ++  G  +K 
Sbjct: 34  KKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKLKKSSSGGGNRKF 93

Query: 112 GEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMALSSGYV 150
           GE SLK  ++ LG   R  VE   + +GEEEQ AA+LLMALS G V
Sbjct: 94  GE-SLKQSLMDLGIRKRSTVEKQRQKLGEEEQ-AAVLLMALSYGSV 137

[Close]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0 

Query: 52  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKV 111
           ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K 
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHNRNPKF 98

Query: 112 GEGSLKVRVVSLGREIV----------EEAIGEEEQAAAMLLMALS 146
           G+ SLK R++ LGRE++             +GEEEQ AA+LLMALS
Sbjct: 99  GD-SLKQRLMELGREVMMQRSTAENQRRNKLGEEEQ-AAVLLMALS 142

[Close]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match: Q6YW48 (Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CGA1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0 

Query: 54  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTK 90
           R C  C TT+TPLWR+GP GP+SLCNACGIR RK +
Sbjct: 176 RVCSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 211

[Close]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.9e-08
Identity = 36/89 (40.45%), Postives = 47/89 (52.81%), Query Frame = 0 

Query: 53  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGV 112
           +R CV C T RTPLWR GPAGP+SLCNACGI+ R             K KN  +N N  +
Sbjct: 41  KRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDL 100

Query: 113 NNKMGKGKKVGEGSLKVRVVSLGREIVEE 129
           N      KK      K+ +V  G+  +++
Sbjct: 101 NLDHRNAKK-----YKINIVDDGKIDIDD 124

[Close]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-08
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 54  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG 105
           R C +C TT TPLWR GP GP+SLCNACGIR++K +       N+++GG +   G
Sbjct: 75  RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAAG 129

[Close]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match: A0A0A0K6B1 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.3e-48
Identity = 120/170 (70.59%), Postives = 130/170 (76.47%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFN-PSLMPDASKQSLLNMEPQKQRACVHC 60
           MLK EVIGD GLD  ++AFLMN +ADLSASTFN PSLM   SK+ LL +E +KQRACVHC
Sbjct: 1   MLKGEVIGDFGLDCLMIAFLMNRAADLSASTFNPPSLMTAVSKEGLLELEAEKQRACVHC 60

Query: 61  RTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV----NNKMGKGKKVG--EGS 120
           R TRTPLWRAGPAGPRSLCNACGIRYRK K N+NN NGGV    NNKMGKGKK+G   GS
Sbjct: 61  RATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNN-NGGVNNNSNNKMGKGKKMGGSGGS 120

Query: 121 LKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
           LKVRVV LGREI              V E+IGEEEQ AA+LLMALSSGYV
Sbjct: 121 LKVRVVRLGREIMVHRPTTAMEDDNEVAESIGEEEQTAALLLMALSSGYV 169

[Close]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match: A0A1S3BSR7 (GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 2.0e-45
Identity = 115/173 (66.47%), Postives = 123/173 (71.10%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCR 60
           MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCR 60

Query: 61  TTRTPLWRAGPAGPRSLCNACGIRYRKTK---------NNNNNSNGGVNNKMGKGKKV-G 120
            TRTPLWRAGPAGPRSLCNACGIRYRK K         NNNNN+N   NNKMGKGKK+ G
Sbjct: 61  ATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNNNNNKMGKGKKMGG 120

Query: 121 EGSLKVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
            GSLK+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Sbjct: 121 GGSLKLRVVRLGREIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYV 169

[Close]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match: A0A5A7TUD0 (GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001480 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 2.2e-44
Identity = 113/169 (66.86%), Postives = 122/169 (72.19%), Query Frame = 0 

Query: 1   MLKAEVIGDLGLDPSIMAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCR 60
           MLK EVIG    D  IMAFLMN +AD S STFNPSLM   S+Q L  +E +KQRACVHCR
Sbjct: 1   MLKGEVIG----DSLIMAFLMNRAADHSPSTFNPSLMTAVSEQGLFELEAEKQRACVHCR 60

Query: 61  TTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNN-----NSNGGVNNKMGKGKKV-GEGSL 120
            TRTPLWRAGPAGPRSLCNACGIRYRK K N+N     N+N   NNKMGKGKK+ G GSL
Sbjct: 61  ATRTPLWRAGPAGPRSLCNACGIRYRKMKMNSNNDGEVNNNNNNNNKMGKGKKMGGGGSL 120

Query: 121 KVRVVSLGREI--------------VEEAIGEEEQAAAMLLMALSSGYV 150
           K+RVV LGREI              V E+IGEEEQ AAMLLMALSSGYV
Sbjct: 121 KLRVVRLGREIMVHRRPTTAMEDNGVAESIGEEEQTAAMLLMALSSGYV 165

[Close]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match: A0A6J1KR45 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36
Identity = 98/146 (67.12%), Postives = 101/146 (69.18%), Query Frame = 0 

Query: 17  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRS 76
           MAF +N   DLS STFNPS +   S Q LL  EPQKQR C HCRTTRTPLWRAGPAGPRS
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCTEPQKQRTCHHCRTTRTPLWRAGPAGPRS 60

Query: 77  LCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV---------- 136
           LCNACGIRYRK KNN    NGGV NK G GKKV      VRVV LGREI+          
Sbjct: 61  LCNACGIRYRKLKNN----NGGV-NKSGNGKKV------VRVVGLGREIMLHRTTAAMAE 120

Query: 137 ---EEAIGEEEQAAAMLLMALSSGYV 150
               E IGEEEQAAAMLLMALSSGYV
Sbjct: 121 NGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match: A0A6J1H9M3 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35
Identity = 97/146 (66.44%), Postives = 101/146 (69.18%), Query Frame = 0 

Query: 17  MAFLMNCSADLSASTFNPSLMPDASKQSLLNMEPQKQRACVHCRTTRTPLWRAGPAGPRS 76
           MAF +N   DLS STFNPS +   S Q LL +EPQKQR C HCRTTRTPLWRAGPAGPRS
Sbjct: 1   MAFFINNHPDLSGSTFNPSSLMAISNQGLLCIEPQKQRTCHHCRTTRTPLWRAGPAGPRS 60

Query: 77  LCNACGIRYRKTKNNNNNSNGGVNNKMGKGKKVGEGSLKVRVVSLGREIV---------- 136
           LCNACGIRYRK K    NSNGGV NK   GKKV      VRVV LGREI+          
Sbjct: 61  LCNACGIRYRKLK----NSNGGV-NKSVNGKKV------VRVVGLGREIMLHRATAAMAE 120

Query: 137 ---EEAIGEEEQAAAMLLMALSSGYV 150
               E IGEEEQAAAMLLMALSSGYV
Sbjct: 121 NGGAETIGEEEQAAAMLLMALSSGYV 135

[Close]
BLAST of Clc09G05660 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 78.2 bits (191), Expect = 6.3e-15
Identity = 52/106 (49.06%), Postives = 67/106 (63.21%), Query Frame = 0 

Query: 52  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNNNNNSNGGV--NNKMGKGKKV 111
           K++ C  C T++TPLWR GP GP+SLCNACGIR RK +      N  +  ++  G  +K 
Sbjct: 34  KKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRRGGTEDNKKLKKSSSGGGNRKF 93

Query: 112 GEGSLKVRVVSLG---REIVE---EAIGEEEQAAAMLLMALSSGYV 150
           GE SLK  ++ LG   R  VE   + +GEEEQ AA+LLMALS G V
Sbjct: 94  GE-SLKQSLMDLGIRKRSTVEKQRQKLGEEEQ-AAVLLMALSYGSV 137

[Close]
BLAST of Clc09G05660 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14
Identity = 49/106 (46.23%), Postives = 66/106 (62.26%), Query Frame = 0 

Query: 52  KQRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN--NNNSNGGVNNKMGKGKKV 111
           ++++C  C T++TPLWR GPAGP+SLCNACGIR RK +    +N S         +  K 
Sbjct: 39  EKKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSEDKKKKSHNRNPKF 98

Query: 112 GEGSLKVRVVSLGREIV----------EEAIGEEEQAAAMLLMALS 146
           G+ SLK R++ LGRE++             +GEEEQ AA+LLMALS
Sbjct: 99  GD-SLKQRLMELGREVMMQRSTAENQRRNKLGEEEQ-AAVLLMALS 142

[Close]
BLAST of Clc09G05660 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 41/96 (42.71%), Postives = 52/96 (54.17%), Query Frame = 0 

Query: 53  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR----------------KTKNNNNNSN 112
           ++ CV C T+RTPLWR GPAGP+SLCNACGI+ R                K+K+NNN   
Sbjct: 36  KKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGIRQDDIKIKSKSNNNLGL 95

Query: 113 GGVNNKMGKGKKVGEGSLKVRVVSLGREIVEEAIGE 133
              N K GKG+ V      V++      IV+ A GE
Sbjct: 96  ESRNVKTGKGEPV-----NVKIAKCEPGIVKIAKGE 126

[Close]
BLAST of Clc09G05660 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09
Identity = 36/89 (40.45%), Postives = 47/89 (52.81%), Query Frame = 0 

Query: 53  QRACVHCRTTRTPLWRAGPAGPRSLCNACGIRYR-------------KTKNNNNNSNGGV 112
           +R CV C T RTPLWR GPAGP+SLCNACGI+ R             K KN  +N N  +
Sbjct: 41  KRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDL 100

Query: 113 NNKMGKGKKVGEGSLKVRVVSLGREIVEE 129
           N      KK      K+ +V  G+  +++
Sbjct: 101 NLDHRNAKK-----YKINIVDDGKIDIDD 124

[Close]
BLAST of Clc09G05660 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-09
Identity = 28/55 (50.91%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 54  RACVHCRTTRTPLWRAGPAGPRSLCNACGIRYRKTKNN----NNNSNGGVNNKMG 105
           R C +C TT TPLWR GP GP+SLCNACGIR++K +       N+++GG +   G
Sbjct: 75  RRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEERRASTARNSTSGGGSTAAG 129

The following BLAST results are available for this feature:
BLAST of Clc09G05660 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659382.16.9e-4870.59GATA transcription factor 15 [Cucumis sativus] >KGN44993.1 hypothetical protein ... [more]
XP_038899958.19.0e-4881.20GATA transcription factor 15-like [Benincasa hispida][more]
XP_008451515.14.2e-4566.47PREDICTED: GATA transcription factor 15-like [Cucumis melo][more]
KAA0046674.14.6e-4466.86GATA transcription factor 15-like [Cucumis melo var. makuwa] >TYK18209.1 GATA tr... [more]
XP_023004687.13.6e-3667.12GATA transcription factor 15-like [Cucurbita maxima][more]
BLAST of Clc09G05660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJ108.9e-1449.06GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1[more]
Q8LG101.5e-1346.23GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2[more]
Q6YW481.3e-0969.44Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 1 OS=Oryza sativa subsp. ... [more]
Q9LIB51.9e-0840.45GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1[more]
Q6QPM24.3e-0850.91GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2[more]
BLAST of Clc09G05660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6B13.3e-4870.59GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G405980 P... [more]
A0A1S3BSR72.0e-4566.47GATA transcription factor 15-like OS=Cucumis melo OX=3656 GN=LOC103492777 PE=4 S... [more]
A0A5A7TUD02.2e-4466.86GATA transcription factor 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A6J1KR451.7e-3667.12GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111497907 PE... [more]
A0A6J1H9M31.5e-3566.44GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111460872 ... [more]
BLAST of Clc09G05660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G49300.16.3e-1549.06GATA transcription factor 16 [more]
AT3G06740.11.1e-1446.23GATA transcription factor 15 [more]
AT4G16141.11.6e-1042.71GATA type zinc finger transcription factor family protein [more]
AT3G16870.11.4e-0940.45GATA transcription factor 17 [more]
AT4G36620.13.0e-0950.91GATA transcription factor 19 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 50..100
e-value: 1.1E-13
score: 61.5
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 56..89
e-value: 8.8E-17
score: 60.4
IPR000679Zinc finger, GATA-typePROSITEPS00344GATA_ZN_FINGER_1coord: 56..81
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 50..86
score: 12.808718
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 55..87
e-value: 1.18025E-15
score: 64.7014
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 46..121
e-value: 5.7E-16
score: 60.0
NoneNo IPR availablePANTHERPTHR47172OS01G0976800 PROTEINcoord: 47..149
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 48..94

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G05660.1Clc09G05660.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding