Clc09G05080 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGATTATGTAGATATCACTTGTGCTCTCAATAAGCTATCATCTGATATGTCAAAAATAAAAAATGTGGTTGATGCCTCGTTGGTTCTTGCACTTCAGGTTGGTGTGCATTCTTTTGTTAAGTATAATCGTTTGTGTAATTTTGTTGTCTACTTTTTGTTGTGTGCGGTAACAAATTTTGTTGCTAAACTTCTTGTTCTAATTTGGAAGATGACCAGGCTTATTGGTATTTCTTTTAAAAAAGAAAATTTTCAAATCCACTCAAAACTAAAAATAAAAATAAAAATAAAAAAATAATAAAAAAATCCCAAGTCAATTATTGAACAAAAGATTTAACTAATTATGGTTTGTGCAAGAACAGCCTCCGAAAATCTCTTTCCAGAGCCACAATAATATCAAAGGGCTGTTCTTGCTGTTTGGTGCATCTCAAATCTCTGCTCCAACTCCCTTTAATGTCCTCTTGCTGTTTTCTTCTTCACTAATCCAAAATCCCACTATGTCAATTGCAGCACTCACCTGCAATTCTACTCCAAACTCTCTCAATCTCGCTCATCCATCGATCAGAAGGAGAAATGGCATCTTGTTCATGGCGATTCCCACTTGCAGAAGCATCAATTCGAGGTCACTCTCTCTACCCGAGCTCGTCTTCAAGATCCCACGTGGTTCTTCGAACCGCAGCAGAAACCCCATTTGCCCTCGACTTAAATTCGTCTCCCCTGTGATGGAATGGCAGGATTGCACGTAAATACGCCATTTCTTTATCGATTCTCAGTTTCTTACCCGTTTATTGATTCTCTATTTGCTATGGCTTGTTTGGATTTCAATTTCGTTGTCCCTTCTAAAAGTTCCCAATTCTTCTCTGGATTGGTTTGGTGGTTGTGCAGTTCTTCCAGGAGGATGGATTCTGAGTTTCTTAGAATGTTATAGGTTTGTTGCTATAATTAGGAAATGTGATGAATGCAGGGCTAAGATGGAAGTTGACATACCTGCTTCGGTTGCCTATAAATGCTACTCAGATCGTGAAGCTATTCCCAAATGGATGCCATTCATTTCATCTGTGAAGGTGAGTTATATATATATCATACACTCTCAAGTAGGTTGCTAGCTGATACCCTTCATTACTGCTTGACTTGGAAACATTTTCCATGCTTAGTTCAAGATGCATTCTAGCGATATGGTAAAGGGGGAAACCTCCAATTTGTTTTGCTGCCTTAAATTAGGAAAAATGTTTGTGAGCCTAGGGAGTAGCTTTGTTATGCTAGTCTCTTATCTGAGTGGATACTAGTGAGGGGCAGGTCTATGTTTATAAGAGAAATGATAGAAGAAGGAAGAGTGAGGACAATGGGTAGAAATAGCTGGTATTTTGGGAGAGAATCAGTCCTCTAAAAGTCTAGTAGCTTACAATTTTCTCTCAATCAATTGTCATAGTTACTTTTGGTAAGGGTTCTATAATGATTCCGCAAGGTATAAATGAAAGCATACTGTGAAATAGAAGTGATGACCGATGAAAGTCACTTTGGTGGATGCTCGTTCTTGGTTAAAGTTAATAATTTGTAATCTTCCCATGCCTGCTCTTGTATCCTAAGTCAAGCCATTTTGTAGGCCTAAGAAGGACAAAGTCAATTACGTGATGCACGGGTATCATAACATAGATGTGGCGATATGTCATTTTTTGAAAGTCTAAGATCAAACTGGAAAGACATGTTTATTAAAATATCCAAGGATTTTAACATATGACCTTTTATGCATTTGTATGTTTAAGAATCAAGTGATGTATATTACTCTCAAAATTTGTTAATTTTAGCTCATATTACTATTTATGTCTATTTACTATGTTTAACAAGTGTTTGATATGTGACTAACAGACGTTGTACCCATATTCACTTTGTACACCATGCTAACAAGTATATATAATGTGTGCCCTACAAGTGTCAAAGTTTCAACAGGTTTCTAATATAGACACATTATAGAAACTAGAGTGAGAGTGGTTGTGCTGCTTAGACGTAGACTATTAACTTTATATGGTAGGAGAAATATGATGCGCAAATTCAAGATGTGAATCTCAAGTCACACTTCCATGTTTGTTTACCACAAACATTTCGATTTTGGAGTTGAGCATTTTGCATGTATTAGAAAATATTGTAGTATTGTGTTTAACTACTTGTTCAATACTCTTTATAGGTATTGGAAGATAACCCTACATTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGGCAAACAATTCTCTGCCTTGGTCCTGCCATTTAACATCCATCACTGCCATATATTCTTTGCCCCTTGATATTTAGGAATGCTCTTGTTAAAATGTTATCTGATAAATATTGCAGCCGACCCTAAATCAAAAAATTCATTGGCGGTCACTTGAAGGTCTTCCCAACAGGTACCTTCCCAATTTAGTTCAAAAGCATTCTTAATATCTTGTGATTTCTTTATTTGACGTCGTTCCATTGGATATGCTTGCCGTATTTTCAACCTCTGAGCATTTGATGGTCAATAATCTTGCATTTGCAGAGGTGTTGTACGATTTTACCCAAAGAGCCCCTCATCTTGCCTCGTAGAAGTAAGTTTACAACATCACATTATTACTCCTCATCTTGCCTCGTAGAAGTAAGTTTACAACATCCCATTATTAACATGTTTATCTCCTTTTTGAGTAAATTACAGGAGACATTCTTACATTTTAGTCCACCGCATTATAAACTCATGCACTTCAAAAAAAAAAATTAGACAAAAGTGAAGCCGACTCTCCATGAAATCAACATAACAGCTGGTGTGTTGGGGGAATCTGCCCACGAGTTAAAAAGAGTAGTATTTGCATTTTTACCTTTTTTCTTCTTGACGTGCCACATTTTGACGGAAAAGTTCATTATAAATCCAAGGCGAAAATTACGGTTCAAAAAATTGGAACATACATGATTCTATTGGGAAGTTATGATTCAGAACACTCAAACATAATGGATACAATCTCATTTCACTCTATTACATTCTTATTCTAGTTTTCGAACATTTCTGGATTTCCCTTTTTGGTTGTTTTCAGTTGACAGTCTCCTATGAAGTTCCTCCTCTTTTGTCTCCAGTGGCCTCTGTAAGCATTCCAGCCTTGGCTTCAATTCCATCAATAGCTCGTAATCAATCATTGAATTCTCTAATTGTTGGTGGTGCGTTTTGAGTAAGTTGAATGATGTTTGCAAATGCAGGCACTGCAACCTCTGCTTGAGAGATTACTTCAACGAGGTCTTAGAAGCTTTGCCAAGTTTGCCAAGAAATACCAAACGGCTTGAAGACTCGATTATTGTTTTATGGGTATCATACATCACCCCATACATTACCATTTTTACCATATACTCCTATTGACAAATGTAAAATCTTGAACAGAATACTTGAACACAATCATCATCTGTTTTTACTAAAGAATTTCATCTTCTTTACAAAAATATGCTGAGCCCAGCTGATTTATTGATATATGTTCA ATGGAATCTGATTATGTAGATATCACTTGTGCTCTCAATAAGCTATCATCTGATATGTCAAAAATAAAAAATGTGGTTGATGCCTCGTTGGTTCTTGCACTTCAGCCTCCGAAAATCTCTTTCCAGAGCCACAATAATATCAAAGGGCTGTTCTTGCTGTTTGGTGCATCTCAAATCTCTGCTCCAACTCCCTTTAATGTCCTCTTGCTGTTTTCTTCTTCACTAATCCAAAATCCCACTATGTCAATTGCAGCACTCACCTGCAATTCTACTCCAAACTCTCTCAATCTCGCTCATCCATCGATCAGAAGGAGAAATGGCATCTTGTTCATGGCGATTCCCACTTGCAGAAGCATCAATTCGAGGTCACTCTCTCTACCCGAGCTCGTCTTCAAGATCCCACGTGGTTCTTCGAACCGCAGCAGAAACCCCATTTGCCCTCGACTTAAATTCGTCTCCCCTGTGATGGAATGGCAGGATTGCACGGCTAAGATGGAAGTTGACATACCTGCTTCGGTTGCCTATAAATGCTACTCAGATCGTGAAGCTATTCCCAAATGGATGCCATTCATTTCATCTGTGAAGGTATTGGAAGATAACCCTACATTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGCCGACCCTAAATCAAAAAATTCATTGGCGGTCACTTGAAGGTCTTCCCAACAGAGGTGTTGTACGATTTTACCCAAAGAGCCCCTCATCTTGCCTCGTAGAATTGACAGTCTCCTATGAAGTTCCTCCTCTTTTGTCTCCAGTGGCCTCTGCACTGCAACCTCTGCTTGAGAGATTACTTCAACGAGGTCTTAGAAGCTTTGCCAAGTTTGCCAAGAAATACCAAACGGCTTGAAGACTCGATTATTGTTTTATGGGTATCATACATCACCCCATACATTACCATTTTTACCATATACTCCTATTGACAAATGTAAAATCTTGAACAGAATACTTGAACACAATCATCATCTGTTTTTACTAAAGAATTTCATCTTCTTTACAAAAATATGCTGAGCCCAGCTGATTTATTGATATATGTTCA ATGGAATCTGATTATGTAGATATCACTTGTGCTCTCAATAAGCTATCATCTGATATGTCAAAAATAAAAAATGTGGTTGATGCCTCGTTGGTTCTTGCACTTCAGCCTCCGAAAATCTCTTTCCAGAGCCACAATAATATCAAAGGGCTGTTCTTGCTGTTTGGTGCATCTCAAATCTCTGCTCCAACTCCCTTTAATGTCCTCTTGCTGTTTTCTTCTTCACTAATCCAAAATCCCACTATGTCAATTGCAGCACTCACCTGCAATTCTACTCCAAACTCTCTCAATCTCGCTCATCCATCGATCAGAAGGAGAAATGGCATCTTGTTCATGGCGATTCCCACTTGCAGAAGCATCAATTCGAGGTCACTCTCTCTACCCGAGCTCGTCTTCAAGATCCCACGTGGTTCTTCGAACCGCAGCAGAAACCCCATTTGCCCTCGACTTAAATTCGTCTCCCCTGTGATGGAATGGCAGGATTGCACGGCTAAGATGGAAGTTGACATACCTGCTTCGGTTGCCTATAAATGCTACTCAGATCGTGAAGCTATTCCCAAATGGATGCCATTCATTTCATCTGTGAAGGTATTGGAAGATAACCCTACATTATCACGGTGGTCACTAAAATATAATGCTTTTGGTCAAGATATCGAGTTCTCTTGGCTTGCTCGAAACTTGCAGCCGACCCTAAATCAAAAAATTCATTGGCGGTCACTTGAAGGTCTTCCCAACAGAGGTGTTGTACGATTTTACCCAAAGAGCCCCTCATCTTGCCTCGTAGAATTGACAGTCTCCTATGAAGTTCCTCCTCTTTTGTCTCCAGTGGCCTCTGCACTGCAACCTCTGCTTGAGAGATTACTTCAACGAGGTCTTAGAAGCTTTGCCAAGTTTGCCAAGAAATACCAAACGGCTTGA MESDYVDITCALNKLSSDMSKIKNVVDASLVLALQPPKISFQSHNNIKGLFLLFGASQISAPTPFNVLLLFSSSLIQNPTMSIAALTCNSTPNSLNLAHPSIRRRNGILFMAIPTCRSINSRSLSLPELVFKIPRGSSNRSRNPICPRLKFVSPVMEWQDCTAKMEVDIPASVAYKCYSDREAIPKWMPFISSVKVLEDNPTLSRWSLKYNAFGQDIEFSWLARNLQPTLNQKIHWRSLEGLPNRGVVRFYPKSPSSCLVELTVSYEVPPLLSPVASALQPLLERLLQRGLRSFAKFAKKYQTA Homology
BLAST of Clc09G05080 vs. NCBI nr
Match: XP_008461396.1 (PREDICTED: uncharacterized protein LOC103499992 isoform X1 [Cucumis melo]) HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-112 Identity = 208/224 (92.86%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of Clc09G05080 vs. NCBI nr
Match: XP_038898800.1 (uncharacterized protein LOC120086302 [Benincasa hispida]) HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-111 Identity = 207/224 (92.41%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of Clc09G05080 vs. NCBI nr
Match: XP_023514604.1 (uncharacterized protein LOC111778852 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 412.5 bits (1059), Expect = 3.1e-111 Identity = 202/224 (90.18%), Postives = 213/224 (95.09%), Query Frame = 0
BLAST of Clc09G05080 vs. NCBI nr
Match: XP_022960550.1 (uncharacterized protein LOC111461253 [Cucurbita moschata]) HSP 1 Score: 411.4 bits (1056), Expect = 6.9e-111 Identity = 202/224 (90.18%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of Clc09G05080 vs. NCBI nr
Match: XP_023004647.1 (uncharacterized protein LOC111497878 [Cucurbita maxima]) HSP 1 Score: 409.1 bits (1050), Expect = 3.4e-110 Identity = 201/224 (89.73%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Clc09G05080 vs. ExPASy TrEMBL
Match: A0A1S3CEM7 (uncharacterized protein LOC103499992 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499992 PE=3 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 6.1e-113 Identity = 208/224 (92.86%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of Clc09G05080 vs. ExPASy TrEMBL
Match: A0A6J1H9D8 (uncharacterized protein LOC111461253 OS=Cucurbita moschata OX=3662 GN=LOC111461253 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 3.3e-111 Identity = 202/224 (90.18%), Postives = 212/224 (94.64%), Query Frame = 0
BLAST of Clc09G05080 vs. ExPASy TrEMBL
Match: A0A6J1KR05 (uncharacterized protein LOC111497878 OS=Cucurbita maxima OX=3661 GN=LOC111497878 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110 Identity = 201/224 (89.73%), Postives = 211/224 (94.20%), Query Frame = 0
BLAST of Clc09G05080 vs. ExPASy TrEMBL
Match: A0A0A0K6F1 (Polyketide_cyc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G414450 PE=3 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.4e-108 Identity = 203/224 (90.62%), Postives = 208/224 (92.86%), Query Frame = 0
BLAST of Clc09G05080 vs. ExPASy TrEMBL
Match: A0A6J1D2J2 (uncharacterized protein LOC111016984 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016984 PE=3 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.9e-106 Identity = 195/224 (87.05%), Postives = 207/224 (92.41%), Query Frame = 0
BLAST of Clc09G05080 vs. TAIR 10
Match: AT1G02475.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 240.7 bits (613), Expect = 1.5e-63 Identity = 131/229 (57.21%), Postives = 155/229 (67.69%), Query Frame = 0
BLAST of Clc09G05080 vs. TAIR 10
Match: AT4G01883.1 (Polyketide cyclase / dehydrase and lipid transport protein ) HSP 1 Score: 211.5 bits (537), Expect = 9.7e-55 Identity = 97/149 (65.10%), Postives = 121/149 (81.21%), Query Frame = 0
BLAST of Clc09G05080 vs. TAIR 10
Match: AT1G02470.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 195.3 bits (495), Expect = 7.2e-50 Identity = 101/206 (49.03%), Postives = 137/206 (66.50%), Query Frame = 0
BLAST of Clc09G05080 vs. TAIR 10
Match: AT1G02470.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48 Identity = 101/207 (48.79%), Postives = 137/207 (66.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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