Clc09G04720 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G04720
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box/WD-40 repeat-containing protein
Location	ClcChr09: 3728770 .. 3733305 (-)
RNA-Seq Expression	Clc09G04720
Synteny	Clc09G04720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCGAATGGGCCTCTTGAAGAACGTATCCATCAGCAGGTCCAAAGCCCACACAGATCCTTCTCCAAGTAGCTACCGGCCTCCTTCTCCAGACGTCGGCGTTTTGCTTCAATCCTTCTCCGTCCGTGAAACCGCCGCCGGTGATTGCCGGCATGACTCCTCCACCGGCCGCCGACAGGTCATCGAAGAGAAGACGGAGTGATGTTGATGCAAAACCAGTTCACTCCCTAAGCCACGACATCTTGTGCATAATTTTCTCGTTTCTTGACCTTTTCGACTTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGTACCGTTTTTCATTTTCTATCTCTGAAGAAAGGAGAGAACAAATAGCGTAGTGAATTTCTTTAATGTATTTGCAGTTTCTTTTTCCTGTTAATTTGATATCTCTAACGAAATTTTGAATGTGCTTGAAGGAATTATGCTATTTATAAGTCCGAGATATTGCGGACGTTTTGCTTGAGGTATCAGAAGCAGGAGACGAACTCCGCTAGTACTTCCGAAGTTTCATTTTCTTTGGAGAAACCATTGGTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTGGCATTGGAGGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGTAAGTTTTGGAAGATAGACATTGGTCATTTTTAATTTTTTTTTTCCCTTTTAATTACATACTGCTTGTGTTCATTAAACATACTTGTTATGGAGCATCTGAAGCTAGGAGTTTGATTGCTGAAGTATCAGATAAAATCGTTTCCTTATTTTACTGTCTTGGCACTTGTGTTTTCTTATCTACAGCTGAGGATTCTTTATCCTCAGACAATGTCAATTTTTCTAATCAACATACTTTTAGTGTTTCCCTTCAGTCGGAGATAAAATACTTTGATTAGGTGTTTCTCCATTGTTTTGTAGCTTTCTTCTTCTTCTTCCTCTCATTATTATTTTGGTATCAATATGAGCATAATTCGTAAATAATTTGAAATCCTCATGAAAATTTTGCATCACTGTGCAGATTTAATTTTTAATTTTTTAAGTTTTGCACTTTGCATAATAACACCTGTAACATGGATTTTTATTTAGGGCTGAACAGTGCCGAATGAAGATGGGCCTAATTCTTACAGGAGTGGGCGATAAAGTACAGCTTCTTACTCTAAGTATTTGATAGAATTTGGTTCAATTCATTTATTTGTCTCGTCCACCCAAGGGAAAAAAAGTGATAAAAATGTGTTAGAGAGAGAGATCAGCTTCAAGTGTGTGCGTGAGAGATACAGAGAGATGTAATTACTCTGAGCAATTCTGGTAGCTAATAGCTTGTTGCAATGCTGCACCAGTCACTTGGTTCTACTAACAGATTTTGCTGTACTTCCAGGTTATGAGACTTTGGTCGCCAGAGAACTTTAGATGTCTAGAAGAATATTCAATTCCTGAGAAAGTGCCATTAATCGATTTTGATTTTGATGTGGGCAAGGTAATATCAATGTATCTCTTGTAAATGTGTTGACATTCTTACTACTTTTAGAAAACTTTTGACAATACATGGTACACTACAGGAAAAAGGTGAGAGATCCTCTTATACATATATGCAACTCTTCCCTTTTCATCTTTTGAATCTTAAATCATTCAGCACTTTTCTGGCTGGAATCAAAAACTTTATTCTTTCCTAATAAAGAATTGATATTAAGTGAATGAAATCTAATTTCCCAAACCATTGTTCTAGATTGTTGGTTTGGTTGGCAGACAGTTGTGCATATGGAGCCGGAGTGGGAAAAGAAGTATATTTCCTTCGCGTGAATGTACTTTCGTGAAGGGGTTGTGTATGCGGTATATGGCTTTAACTTTCTTATGTTAAAATCATTTAATTTTCACTGAAGTATCATTGGCATTTACAACAATTATGAGCGCGCATTTATTGTCTAGAAGATTTATTTTCTTTCCCTGAAATAAATTGAAATAATTTACTGTTGAATAATGTAATTAAACAGGGTAGAAGAGGACGAAATCCTCTCTCGAAAAGAAAACTCATGCAATAACAAAAACATTGTACCATCTAATATAAATATAATTATAATTCTATTTTTATCCTTTTGCTTTTAGGAAATAAACTTGTTCAATATTTTCTATTCCACAATCATTTATAGGCTTAAAGTGCTTCTCAATTGGTTTTCAATTAATTTGTATGATGAGTCTTCCAAACCTGCTTCCAGTTACTTTGATGCAGAGGCTGTTGTGGGTTCTGAAGATGGAACAGCTCATGTATTTGACATGTACAGTAGGAGATGCTCTAGAATTATCAGGTAAAACGGGAGAAATATTTATGACATTACACCTTTCCTTCTATTGTCCTTTGGGCAGGGGCTACCAACAGACTAAGTTTAGGCAATGACTGAACAGACAAAAGTAGCTACCATTTAGAAGTTGACTTGGTGAAAATACTATGACATAATTTTGATATTGATTACTTTTCCGTTCCCCATGCACACGAACGCTGTTGCTGACATTTGCACACTAGGAAGTAGGAATGTTTAGATCTATATTTTATGCAAATTGAAGGCTAATGGAAAACGAATTTTCAGCATTTCTTATTGCGTGGGCGGTTTCATGTGAAATTTCCTAAATGGTTGACATACCATGTTCTATTTTGACTTCCGTATCAATTTTATTAATTTTTTTATTTTTATTTTTATTTTTATTGCAGGATGCTTCCTGGGCCCGTGACTTGCTTATGTGTGAGTGATGATCAGCTCATACTTGGTGGTTCCCTACTTGGGAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTCAGATCAAGAAATACCGTAGGTTATATCTGATGCCTTCAGTTCTGATTCTCCATGCATGTGGCAGTCTTACTCTTGGACGATTCTCTTCTCTTTATCTCCTCGTTTAAACTTTTGTTTGTGTCACAGACTTACTAGAAACAAAATATAACATGATAAATAGTCCTCTGAATTAGAGATAAGAAGTGAAGCATTTCAGGCAGTGTAACTTAACGTCTCAAGATTGGTCCCAAATGGTTTGCATTTAGCCGAATTAGCCAATTTAGCTTTCTTCTGAAGGCACCAACACATTTTGCTTTTCAATTGGATAACATTCCTAGCTTTCCTTGTGGTTTGTTCCCTTCATGTTTGCTGCAGGATGATTTTTGAAATAGGCTTCATCATGTGTAAAAAAAATTATTTCTTTTTTGATAAATTTGTGTTAAATGCAGTGTATATTTTATTACGATCTATCTTTGCAGGCATAAGGACTTTGTGTTACAACGATTCTACACATTTAGTGTTCGCGGGATCAACTGCCGGCCATGTCTATTGTTGGGACCTCAGGTAAGTAAAAAGAACTTCAGATGTAACTTCAGATGCCTGTCTGACCACCTATTTCAGCTTGCTGCTTGAACAATTAATGGATAATGCATATGGAAAACAATTTTCTGCTATGAACTTTGCAACTACTACACTTTAATTGTTAATCCCATGATGGTTAACTTAATGGTTGAATTTCCAATGCTGTTTGAATATTGAAACAAAATGAAATTATTCTTCTGAAATTAGGTATAATAATCCAGCCTTTCAGGAGGTTCTTTACTTCTATCCTTCAATTATGCTAAAGAGAAGAGAAGTTCTGATGCTACCATCCTTGCTGCCTATGATATTCTAATTTCAGATCACCTTATTTGTTTATTCACTACTTTAGTGCATGTTTGAGAATGATTTTGAAATTGTTAAATCACTTTTTGTCATTTTCACAATCACTCCAAAACATGTTTTGAATAATTCAAAATCAATTTTGATGATATAAAATCACATTTAAAACAGTAAAATAAAATATTAACTTGATTTTGAATATGGCAAAAGTGATTTTAACTATTTCAAAACCACTCCCAAGCATTCACTTAGTCACTGTCTTCATATTATATACTCATTGAGTTCTGCACATTTCTTAGGACTATGAAATCCTTATGGGAATCTCGAGTGAGCCCGAACGTCGTATATTCTTTGCAACATCTCCAAAATGACAGGTCAAGTTTGGCCGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGTTGTATTATGGATCGTAGATTGTTATCAACATACCGGAATGGTCTCGAAGTTGTCGAAGAAAGGATAGGGAAAAGATTGTCAGATGAGACTCCAATTGATGCCATAAACAGAAGGAATAGGCCTTCGATCACAAGCTTGGCCGTTGGAATGAATAAGATAGTCACAACGCACAATGATAAGTTCATTAGATTGTGGAAGTTTCAAAGCTAATTTTATTTCCTATGCTCTTTATTTAAAGTGTATATATATATTTGCATATTGCCGTACGAGATTTATGATGAGTAATTTCAAGTTCTGATCAGATACAACTTTCGCTTTCAAGTAAAACTTATAGATTTCAACTCAGTGGATGGGGATAAATTTTTTGAGTTCAT

mRNA sequence

GGCGAATGGGCCTCTTGAAGAACGTATCCATCAGCAGGTCCAAAGCCCACACAGATCCTTCTCCAAGTAGCTACCGGCCTCCTTCTCCAGACGTCGGCGTTTTGCTTCAATCCTTCTCCGTCCGTGAAACCGCCGCCGGTGATTGCCGGCATGACTCCTCCACCGGCCGCCGACAGGTCATCGAAGAGAAGACGGAGTGATGTTGATGCAAAACCAGTTCACTCCCTAAGCCACGACATCTTGTGCATAATTTTCTCGTTTCTTGACCTTTTCGACTTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGAATTATGCTATTTATAAGTCCGAGATATTGCGGACGTTTTGCTTGAGGTATCAGAAGCAGGAGACGAACTCCGCTAGTACTTCCGAAGTTTCATTTTCTTTGGAGAAACCATTGGTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTGGCATTGGAGGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGAGTTTGATTGCTGAAGTATCAGATAAAATCGTTTCCTTATTTTACTGTCTTGGCACTTGTGTTTTCTTATCTACAGCTGAGGATTCTTTATCCTCAGACAATGTTATGAGACTTTGGTCGCCAGAGAACTTTAGATGTCTAGAAGAATATTCAATTCCTGAGAAAGTGCCATTAATCGATTTTGATTTTGATGTGGGCAAGATTGTTGGTTTGGTTGGCAGACAGTTGTGCATATGGAGCCGGAGTGGGAAAAGAAGTATATTTCCTTCGCGTGAATGTACTTTCGTGAAGGGGTTGTGTATGCGGCTTAAAGTGCTTCTCAATTGGTTTTCAATTAATTTGTATGATGAGTCTTCCAAACCTGCTTCCAGTTACTTTGATGCAGAGGCTGTTGTGGGTTCTGAAGATGGAACAGCTCATGTATTTGACATGTACAGTAGGAGATGCTCTAGAATTATCAGGATGCTTCCTGGGCCCGTGACTTGCTTATGTGTGAGTGATGATCAGCTCATACTTGGTGGTTCCCTACTTGGGAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTCAGATCAAGAAATACCGTAGGCATAAGGACTTTGTGTTACAACGATTCTACACATTTAGTGTTCGCGGGATCAACTGCCGGCCATGTCTATTGTTGGGACCTCAGGACTATGAAATCCTTATGGGAATCTCGAGTGAGCCCGAACGTCGTATATTCTTTGCAACATCTCCAAAATGACAGGTCAAGTTTGGCCGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGTTGTATTATGGATCGTAGATTGTTATCAACATACCGGAATGGTCTCGAAGTTGTCGAAGAAAGGATAGGGAAAAGATTGTCAGATGAGACTCCAATTGATGCCATAAACAGAAGGAATAGGCCTTCGATCACAAGCTTGGCCGTTGGAATGAATAAGATAGTCACAACGCACAATGATAAGTTCATTAGATTGTGGAAGTTTCAAAGCTAATTTTATTTCCTATGCTCTTTATTTAAAGTGTATATATATATTTGCATATTGCCGTACGAGATTTATGATGAGTAATTTCAAGTTCTGATCAGATACAACTTTCGCTTTCAAGTAAAACTTATAGATTTCAACTCAGTGGATGGGGATAAATTTTTTGAGTTCAT

Coding sequence (CDS)

ATGACTCCTCCACCGGCCGCCGACAGGTCATCGAAGAGAAGACGGAGTGATGTTGATGCAAAACCAGTTCACTCCCTAAGCCACGACATCTTGTGCATAATTTTCTCGTTTCTTGACCTTTTCGACTTGGTTCGATGCTCAGTTGTTTGTAAATCCTGGAATTATGCTATTTATAAGTCCGAGATATTGCGGACGTTTTGCTTGAGGTATCAGAAGCAGGAGACGAACTCCGCTAGTACTTCCGAAGTTTCATTTTCTTTGGAGAAACCATTGGTGGAATGTTTAGAGGAAATAGCGATGGAACGACACAAGTTGGCATTGGAGGAAGGTCGTATTAGAGTTTCTCAATGGATTGGCCATTCAGTGAGGAGTTTGATTGCTGAAGTATCAGATAAAATCGTTTCCTTATTTTACTGTCTTGGCACTTGTGTTTTCTTATCTACAGCTGAGGATTCTTTATCCTCAGACAATGTTATGAGACTTTGGTCGCCAGAGAACTTTAGATGTCTAGAAGAATATTCAATTCCTGAGAAAGTGCCATTAATCGATTTTGATTTTGATGTGGGCAAGATTGTTGGTTTGGTTGGCAGACAGTTGTGCATATGGAGCCGGAGTGGGAAAAGAAGTATATTTCCTTCGCGTGAATGTACTTTCGTGAAGGGGTTGTGTATGCGGCTTAAAGTGCTTCTCAATTGGTTTTCAATTAATTTGTATGATGAGTCTTCCAAACCTGCTTCCAGTTACTTTGATGCAGAGGCTGTTGTGGGTTCTGAAGATGGAACAGCTCATGTATTTGACATGTACAGTAGGAGATGCTCTAGAATTATCAGGATGCTTCCTGGGCCCGTGACTTGCTTATGTGTGAGTGATGATCAGCTCATACTTGGTGGTTCCCTACTTGGGAACATTGGAGTATCGGGTCTTCGGTCTGATCAGCGGGTAGCAATGCTCAGATCAAGAAATACCGTAGGCATAAGGACTTTGTGTTACAACGATTCTACACATTTAGTGTTCGCGGGATCAACTGCCGGCCATGTCTATTGTTGGGACCTCAGGACTATGAAATCCTTATGGGAATCTCGAGTGAGCCCGAACGTCGTATATTCTTTGCAACATCTCCAAAATGACAGGTCAAGTTTGGCCGTTGGTGGAATAGATGGCATTCTACGTATTTTAGATCAGAATACAGGCACGGTGCGGTCGTGTTGTATTATGGATCGTAGATTGTTATCAACATACCGGAATGGTCTCGAAGTTGTCGAAGAAAGGATAGGGAAAAGATTGTCAGATGAGACTCCAATTGATGCCATAAACAGAAGGAATAGGCCTTCGATCACAAGCTTGGCCGTTGGAATGAATAAGATAGTCACAACGCACAATGATAAGTTCATTAGATTGTGGAAGTTTCAAAGCTAA

Protein sequence

MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKSEILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGHSVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVPLIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDESSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWESRVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVVEERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS

Homology

[Close]

BLAST of Clc09G04720 vs. NCBI nr
Match: XP_038899781.1 (F-box/WD-40 repeat-containing protein At3g52030 [Benincasa hispida])

HSP 1 Score: 775.4 bits (2001), Expect = 2.8e-220
Identity = 394/471 (83.65%), Postives = 411/471 (87.26%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           MTPPPAA+RSS RRRSD+DAKPVHSLS+DILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS
Sbjct: 1   MTPPPAAERSSTRRRSDIDAKPVHSLSYDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFC RYQKQE N+ASTSEVSFSLEKPL+ECLEEIAMERHKLAL+EGRIRVSQWIGH
Sbjct: 61  EILRTFCSRYQKQEMNTASTSEVSFSLEKPLLECLEEIAMERHKLALKEGRIRVSQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWSPE FRCLEEYSIPEKVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSPEKFRCLEEYSIPEKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           L+DFDFD+GKIVGLVGRQLCIWSRSG RSIFPSRECTFVKGLCMR               
Sbjct: 181 LVDFDFDMGKIVGLVGRQLCIWSRSGNRSIFPSRECTFVKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFDAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL
Sbjct: 241 -------YFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRVAMLRSRNTVGIR+LCYNDS+HLVFAGSTAGHVYCWDLR MKSLWES
Sbjct: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRSLCYNDSSHLVFAGSTAGHVYCWDLRMMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMD RLLST++N L  V
Sbjct: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDSRLLSTHQNSLGTV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKI TTHNDKFIRLWKFQS
Sbjct: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIATTHNDKFIRLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. NCBI nr
Match: KAA0058585.1 (F-box/WD-40 repeat-containing protein [Cucumis melo var. makuwa] >TYK10385.1 F-box/WD-40 repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 764.6 bits (1973), Expect = 5.0e-217
Identity = 389/471 (82.59%), Postives = 407/471 (86.41%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           MTPPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MTPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTS+VSFSLEKPL++CLEEIAMERHKLALE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWSPENFRCLEEYSIPEKVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSIPEKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           LIDFDFDVGKIVGLVG+QLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LIDFDFDVGKIVGLVGKQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFDAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRV MLRSRNTVGIRTLC NDS+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLRSDQRVVMLRSRNTVGIRTLCCNDSSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCC+MD RLLST++NGL  V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCMMDSRLLSTHQNGLGTV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPIDAI+RRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS
Sbjct: 421 EERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. NCBI nr
Match: XP_008461347.1 (PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 [Cucumis melo])

HSP 1 Score: 763.8 bits (1971), Expect = 8.5e-217
Identity = 388/471 (82.38%), Postives = 406/471 (86.20%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           M PPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MAPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTS+VSFSLEKPL++CLEEIAMERHKLALE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWSPENFRCLEEYSIPEKVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSIPEKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           LIDFDFDVGKIVGLVG+QLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LIDFDFDVGKIVGLVGKQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  Y DAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YLDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRV MLRSRNTVGIRTLCYNDS+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLRSDQRVVMLRSRNTVGIRTLCYNDSSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCC+MD RLLST++NGL  V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCMMDSRLLSTHQNGLGTV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPIDAI+RRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS
Sbjct: 421 EERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. NCBI nr
Match: XP_004135950.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucumis sativus] >KGN45091.1 hypothetical protein Csa_016799 [Cucumis sativus])

HSP 1 Score: 761.9 bits (1966), Expect = 3.2e-216
Identity = 384/471 (81.53%), Postives = 408/471 (86.62%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           MTPPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLGVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTSEVSFSLEKPL+ECLEEIAMERHKLALE+GRIRVSQWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR  + +   K+  +   +G              D VMRLWSPENFRCLEEYS+PEK+P
Sbjct: 121 SVR--VEQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSVPEKMP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           L+DFDFDVGKIVGL+GRQLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFDAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSG+RSDQRV MLRSRNTVGIRTLCYN S+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGVRSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCC+MD RLLST+++GL +V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSRLLSTHQDGLGIV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPID I+RRNRPSITSLAVGMNKIVTTHNDKFI+LWKFQS
Sbjct: 421 EERRGKRLSDETPIDTIDRRNRPSITSLAVGMNKIVTTHNDKFIKLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. NCBI nr
Match: XP_022149888.1 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Momordica charantia])

HSP 1 Score: 721.8 bits (1862), Expect = 3.7e-204
Identity = 367/471 (77.92%), Postives = 394/471 (83.65%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           M PPPAADRSS R+RS +D+K V SLSHD+LCIIFSFLDLFDLVRCSVVCKSWNYA++KS
Sbjct: 1   MAPPPAADRSSTRKRSGIDSKRVPSLSHDMLCIIFSFLDLFDLVRCSVVCKSWNYAVHKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EIL+ FC R+QKQ+ NS S+SE+SFS EKPL  CLEEIAMERHKLA EE  I+VS W GH
Sbjct: 61  EILQAFCSRHQKQQMNSGSSSEISFSSEKPLEVCLEEIAMERHKLAFEEAPIKVSHWTGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWS ENFRCLEEYSIP KVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSSENFRCLEEYSIPAKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           L+DFDFD GKIVGLVGRQ+CIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LVDFDFDEGKIVGLVGRQVCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFD EAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGS+L
Sbjct: 241 -------YFDPEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSVL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGL SDQRVAMLRSRNTVGIRTLCYN S+HLVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLFSDQRVAMLRSRNTVGIRTLCYNASSHLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPN+VYSL+HLQNDRSSLAVGGIDGILRIL+QNTGTVRSCCIMD RLLSTY+NGL VV
Sbjct: 361 RVSPNIVYSLRHLQNDRSSLAVGGIDGILRILEQNTGTVRSCCIMDSRLLSTYQNGLGVV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EERIGKR+S ETPIDAINRRNRP ITSLAVGMNKIVTTHNDKFIRLWKFQ+
Sbjct: 421 EERIGKRVSYETPIDAINRRNRPQITSLAVGMNKIVTTHNDKFIRLWKFQN 433

[Close]

BLAST of Clc09G04720 vs. ExPASy Swiss-Prot
Match: Q9SV01 (F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 GN=At3g52030 PE=4 SV=2)

HSP 1 Score: 400.6 bits (1028), Expect = 2.5e-110
Identity = 227/485 (46.80%), Postives = 293/485 (60.41%), Query Frame = 0


Query: 8   DRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKSEILRTFC 67
           D SS R+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I + ++L+  C
Sbjct: 8   DESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASC 67

Query: 68  LRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGHSVRSLIA 127
            +     ++S S+S    SL++P    +E+ AM+ HK+AL  GRI + +W  HS R  ++
Sbjct: 68  RKMHHLGSDSPSSST---SLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHR--VS 127

Query: 128 EVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVPLIDFDFD 187
           +   K   L   +G              D VMRLWS ++++C+EEYS+P+   LIDFDFD
Sbjct: 128 QCRMKKGLLLTGVG--------------DKVMRLWSLKSYKCMEEYSLPDASSLIDFDFD 187

Query: 188 VGK---------------------IVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRL 247
             K                     IVGLVG ++ IW R+G+RSIFPSR  TF KGLCMR 
Sbjct: 188 ESKKLEVVSLAWEYFDSVVVVVVEIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMR- 247

Query: 248 KVLLNWFSINLYDESSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCL 307
                                Y D EAVVG EDGTA VFDMYS+ CS+IIR   GP+TCL
Sbjct: 248 ---------------------YIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCL 307

Query: 308 CVSDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNTV-GIRTLCYNDSTHLVFAGSTAGH 367
            +SD+QL L GS LG + VS    DQ VA L+S  T  GI+T+C+N  T+L F G+T G+
Sbjct: 308 SLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGY 367

Query: 368 VYCWDLRTMKSLWESRVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIM 427
           V CWDLR M  LWE RVSPNVVYS+Q L+ND S +  GGIDG+LR++DQ +G V S  IM
Sbjct: 368 VSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIM 427

Query: 428 DRRLLST-YRNGLEVVEERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFI 470
           D +  +T  RN   V+E+R GKR+S +  ID I R+ RP I+ +A+GM K+VT HN K I
Sbjct: 428 DDKFSTTSTRNNQVVIEKRRGKRVSQDMEIDKIERKVRPQISCIAMGMKKMVTAHNGKCI 451

[Close]

BLAST of Clc09G04720 vs. ExPASy TrEMBL
Match: A0A5D3CFV2 (F-box/WD-40 repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00270 PE=4 SV=1)

HSP 1 Score: 764.6 bits (1973), Expect = 2.4e-217
Identity = 389/471 (82.59%), Postives = 407/471 (86.41%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           MTPPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MTPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTS+VSFSLEKPL++CLEEIAMERHKLALE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWSPENFRCLEEYSIPEKVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSIPEKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           LIDFDFDVGKIVGLVG+QLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LIDFDFDVGKIVGLVGKQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFDAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRV MLRSRNTVGIRTLC NDS+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLRSDQRVVMLRSRNTVGIRTLCCNDSSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCC+MD RLLST++NGL  V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCMMDSRLLSTHQNGLGTV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPIDAI+RRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS
Sbjct: 421 EERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. ExPASy TrEMBL
Match: A0A1S3CEH9 (F-box/WD-40 repeat-containing protein At3g52030 OS=Cucumis melo OX=3656 GN=LOC103499956 PE=4 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 4.1e-217
Identity = 388/471 (82.38%), Postives = 406/471 (86.20%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           M PPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MAPPPTADRSSMRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLAVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTS+VSFSLEKPL++CLEEIAMERHKLALE+GRIRV QWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSKVSFSLEKPLLDCLEEIAMERHKLALEKGRIRVYQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWSPENFRCLEEYSIPEKVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSIPEKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           LIDFDFDVGKIVGLVG+QLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LIDFDFDVGKIVGLVGKQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  Y DAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YLDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRV MLRSRNTVGIRTLCYNDS+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLRSDQRVVMLRSRNTVGIRTLCYNDSSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCC+MD RLLST++NGL  V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCMMDSRLLSTHQNGLGTV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPIDAI+RRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS
Sbjct: 421 EERRGKRLSDETPIDAIDRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. ExPASy TrEMBL
Match: A0A0A0KBD6 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420840 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.6e-216
Identity = 384/471 (81.53%), Postives = 408/471 (86.62%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           MTPPP ADRSS RRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRC  VCKSWNYAIYKS
Sbjct: 1   MTPPPTADRSSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLGVCKSWNYAIYKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EILRTFCLRYQKQE NSASTSEVSFSLEKPL+ECLEEIAMERHKLALE+GRIRVSQWIGH
Sbjct: 61  EILRTFCLRYQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR  + +   K+  +   +G              D VMRLWSPENFRCLEEYS+PEK+P
Sbjct: 121 SVR--VEQCRMKMGLILTGVG--------------DKVMRLWSPENFRCLEEYSVPEKMP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           L+DFDFDVGKIVGL+GRQLCIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LVDFDFDVGKIVGLIGRQLCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFDAEAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCV+DDQL+ GGSLL
Sbjct: 241 -------YFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVNDDQLMFGGSLL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSG+RSDQRV MLRSRNTVGIRTLCYN S+ LVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGVRSDQRVVMLRSRNTVGIRTLCYNASSRLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNV+YSLQHLQNDRSSLAVGGIDGILRILDQNTGTV+SCC+MD RLLST+++GL +V
Sbjct: 361 RVSPNVIYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVQSCCMMDSRLLSTHQDGLGIV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EER GKRLSDETPID I+RRNRPSITSLAVGMNKIVTTHNDKFI+LWKFQS
Sbjct: 421 EERRGKRLSDETPIDTIDRRNRPSITSLAVGMNKIVTTHNDKFIKLWKFQS 433

[Close]

BLAST of Clc09G04720 vs. ExPASy TrEMBL
Match: A0A6J1D7Z0 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018194 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.8e-204
Identity = 367/471 (77.92%), Postives = 394/471 (83.65%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           M PPPAADRSS R+RS +D+K V SLSHD+LCIIFSFLDLFDLVRCSVVCKSWNYA++KS
Sbjct: 1   MAPPPAADRSSTRKRSGIDSKRVPSLSHDMLCIIFSFLDLFDLVRCSVVCKSWNYAVHKS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           EIL+ FC R+QKQ+ NS S+SE+SFS EKPL  CLEEIAMERHKLA EE  I+VS W GH
Sbjct: 61  EILQAFCSRHQKQQMNSGSSSEISFSSEKPLEVCLEEIAMERHKLAFEEAPIKVSHWTGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWS ENFRCLEEYSIP KVP
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSSENFRCLEEYSIPAKVP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           L+DFDFD GKIVGLVGRQ+CIWSRSGKRSIFPSRECTF KGLCMR               
Sbjct: 181 LVDFDFDEGKIVGLVGRQVCIWSRSGKRSIFPSRECTFEKGLCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFD EAVVG EDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGS+L
Sbjct: 241 -------YFDPEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSVL 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGL SDQRVAMLRSRNTVGIRTLCYN S+HLVFAGSTAGHVYCWDLRTMKSLWES
Sbjct: 301 GNIGVSGLFSDQRVAMLRSRNTVGIRTLCYNASSHLVFAGSTAGHVYCWDLRTMKSLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPN+VYSL+HLQNDRSSLAVGGIDGILRIL+QNTGTVRSCCIMD RLLSTY+NGL VV
Sbjct: 361 RVSPNIVYSLRHLQNDRSSLAVGGIDGILRILEQNTGTVRSCCIMDSRLLSTYQNGLGVV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EERIGKR+S ETPIDAINRRNRP ITSLAVGMNKIVTTHNDKFIRLWKFQ+
Sbjct: 421 EERIGKRVSYETPIDAINRRNRPQITSLAVGMNKIVTTHNDKFIRLWKFQN 433

[Close]

BLAST of Clc09G04720 vs. ExPASy TrEMBL
Match: A0A6J1HB56 (F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461209 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 3.7e-202
Identity = 363/471 (77.07%), Postives = 395/471 (83.86%), Query Frame = 0


Query: 1   MTPPPAADRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKS 60
           M PP  ADRSS RRRS++DAKPV+SLSHDILCIIFSFLDLFDLVRCSVVCKSWN AI+ S
Sbjct: 1   MAPPTVADRSSARRRSNIDAKPVYSLSHDILCIIFSFLDLFDLVRCSVVCKSWNNAIFNS 60

Query: 61  EILRTFCLRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGH 120
           E+LRTFC+++QKQE  S+S+ EVS S EKPL+ECLEEIAMERHKLALEEGRIRVSQW+GH
Sbjct: 61  ELLRTFCMKHQKQEMESSSSFEVSASSEKPLLECLEEIAMERHKLALEEGRIRVSQWMGH 120

Query: 121 SVRSLIAEVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVP 180
           SVR+   +   K+  +   +G              D VMRLWS ENFRCLEEYSIPEK+P
Sbjct: 121 SVRA--EQCRMKMGLILTGVG--------------DKVMRLWSSENFRCLEEYSIPEKLP 180

Query: 181 LIDFDFDVGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDE 240
           LIDFDFD  KIVGLVGR LCIWSRSGKRSIFPSRECTFV+G CMR               
Sbjct: 181 LIDFDFDESKIVGLVGRNLCIWSRSGKRSIFPSRECTFVEGSCMR--------------- 240

Query: 241 SSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLL 300
                  YFD EAVVG  DGTAHVFDMYSRRCSRI+RMLPGPVTCLCV DDQLILGGSL 
Sbjct: 241 -------YFDPEAVVGCGDGTAHVFDMYSRRCSRIVRMLPGPVTCLCVGDDQLILGGSLH 300

Query: 301 GNIGVSGLRSDQRVAMLRSRNTVGIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWES 360
           GNIGVSGLRSDQRVAMLRSRNT+GI+T+CYN S+HLVFAGSTAGHVYCWDLRTMK LWES
Sbjct: 301 GNIGVSGLRSDQRVAMLRSRNTIGIKTMCYNASSHLVFAGSTAGHVYCWDLRTMKPLWES 360

Query: 361 RVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLSTYRNGLEVV 420
           RVSPNVVYSL+HLQNDRSSLAVGGIDGILRILDQNTGTVRS CIMD RLLSTY++G+ VV
Sbjct: 361 RVSPNVVYSLRHLQNDRSSLAVGGIDGILRILDQNTGTVRSGCIMDSRLLSTYQSGVGVV 420

Query: 421 EERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKFQS 472
           EERIG RLSDETPIDAI+RR+RP ITSLAVGMNKIVTTHNDKFIRLWKF++
Sbjct: 421 EERIGNRLSDETPIDAIHRRSRPPITSLAVGMNKIVTTHNDKFIRLWKFRN 433

[Close]

BLAST of Clc09G04720 vs. TAIR 10
Match: AT3G52030.2 (F-box family protein with WD40/YVTN repeat doamin )

HSP 1 Score: 412.9 bits (1060), Expect = 3.4e-115
Identity = 227/464 (48.92%), Postives = 293/464 (63.15%), Query Frame = 0


Query: 8   DRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKSEILRTFC 67
           D SS R+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I + ++L+  C
Sbjct: 8   DESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASC 67

Query: 68  LRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGHSVRSLIA 127
            +     ++S S+S    SL++P    +E+ AM+ HK+AL  GRI + +W  HS R  ++
Sbjct: 68  RKMHHLGSDSPSSST---SLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHR--VS 127

Query: 128 EVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVPLIDFDFD 187
           +   K   L   +G              D VMRLWS ++++C+EEYS+P+   LIDFDFD
Sbjct: 128 QCRMKKGLLLTGVG--------------DKVMRLWSLKSYKCMEEYSLPDASSLIDFDFD 187

Query: 188 VGKIVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRLKVLLNWFSINLYDESSKPASS 247
             KIVGLVG ++ IW R+G+RSIFPSR  TF KGLCMR                      
Sbjct: 188 ESKIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMR---------------------- 247

Query: 248 YFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCLCVSDDQLILGGSLLGNIGVSG 307
           Y D EAVVG EDGTA VFDMYS+ CS+IIR   GP+TCL +SD+QL L GS LG + VS 
Sbjct: 248 YIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCLSLSDNQLFLSGSSLGRVTVSD 307

Query: 308 LRSDQRVAMLRSRNTV-GIRTLCYNDSTHLVFAGSTAGHVYCWDLRTMKSLWESRVSPNV 367
              DQ VA L+S  T  GI+T+C+N  T+L F G+T G+V CWDLR M  LWE RVSPNV
Sbjct: 308 PLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGYVSCWDLRKMDRLWEKRVSPNV 367

Query: 368 VYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIMDRRLLST-YRNGLEVVEERIG 427
           VYS+Q L+ND S +  GGIDG+LR++DQ +G V S  IMD +  +T  RN   V+E+R G
Sbjct: 368 VYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIMDDKFSTTSTRNNQVVIEKRRG 427

Query: 428 KRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFIRLWKF 470
           KR+S +  ID I R+ RP I+ +A+GM K+VT HN K I +WKF
Sbjct: 428 KRVSQDMEIDKIERKVRPQISCIAMGMKKMVTAHNGKCISVWKF 430

[Close]

BLAST of Clc09G04720 vs. TAIR 10
Match: AT3G52030.1 (F-box family protein with WD40/YVTN repeat doamin )

HSP 1 Score: 400.6 bits (1028), Expect = 1.8e-111
Identity = 227/485 (46.80%), Postives = 293/485 (60.41%), Query Frame = 0


Query: 8   DRSSKRRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCSVVCKSWNYAIYKSEILRTFC 67
           D SS R+        + SL  DILCIIFSFLDLFDLV C+VVC SWN  I + ++L+  C
Sbjct: 8   DESSARKMRRKVPTSIESLDADILCIIFSFLDLFDLVHCTVVCNSWNAVIKRLKLLQASC 67

Query: 68  LRYQKQETNSASTSEVSFSLEKPLVECLEEIAMERHKLALEEGRIRVSQWIGHSVRSLIA 127
            +     ++S S+S    SL++P    +E+ AM+ HK+AL  GRI + +W  HS R  ++
Sbjct: 68  RKMHHLGSDSPSSST---SLDRPAEIDVEDFAMKHHKMALLRGRIEIERWEAHSHR--VS 127

Query: 128 EVSDKIVSLFYCLGTCVFLSTAEDSLSSDNVMRLWSPENFRCLEEYSIPEKVPLIDFDFD 187
           +   K   L   +G              D VMRLWS ++++C+EEYS+P+   LIDFDFD
Sbjct: 128 QCRMKKGLLLTGVG--------------DKVMRLWSLKSYKCMEEYSLPDASSLIDFDFD 187

Query: 188 VGK---------------------IVGLVGRQLCIWSRSGKRSIFPSRECTFVKGLCMRL 247
             K                     IVGLVG ++ IW R+G+RSIFPSR  TF KGLCMR 
Sbjct: 188 ESKKLEVVSLAWEYFDSVVVVVVEIVGLVGTRISIWRRNGQRSIFPSRAGTFPKGLCMR- 247

Query: 248 KVLLNWFSINLYDESSKPASSYFDAEAVVGSEDGTAHVFDMYSRRCSRIIRMLPGPVTCL 307
                                Y D EAVVG EDGTA VFDMYS+ CS+IIR   GP+TCL
Sbjct: 248 ---------------------YIDPEAVVGCEDGTARVFDMYSKTCSQIIRTQGGPITCL 307

Query: 308 CVSDDQLILGGSLLGNIGVSGLRSDQRVAMLRSRNTV-GIRTLCYNDSTHLVFAGSTAGH 367
            +SD+QL L GS LG + VS    DQ VA L+S  T  GI+T+C+N  T+L F G+T G+
Sbjct: 308 SLSDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGY 367

Query: 368 VYCWDLRTMKSLWESRVSPNVVYSLQHLQNDRSSLAVGGIDGILRILDQNTGTVRSCCIM 427
           V CWDLR M  LWE RVSPNVVYS+Q L+ND S +  GGIDG+LR++DQ +G V S  IM
Sbjct: 368 VSCWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIM 427

Query: 428 DRRLLST-YRNGLEVVEERIGKRLSDETPIDAINRRNRPSITSLAVGMNKIVTTHNDKFI 470
           D +  +T  RN   V+E+R GKR+S +  ID I R+ RP I+ +A+GM K+VT HN K I
Sbjct: 428 DDKFSTTSTRNNQVVIEKRRGKRVSQDMEIDKIERKVRPQISCIAMGMKKMVTAHNGKCI 451

The following BLAST results are available for this feature:

BLAST of Clc09G04720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899781.1	2.8e-220	83.65	F-box/WD-40 repeat-containing protein At3g52030 [Benincasa hispida]	[more]
KAA0058585.1	5.0e-217	82.59	F-box/WD-40 repeat-containing protein [Cucumis melo var. makuwa] >TYK10385.1 F-b...	[more]
XP_008461347.1	8.5e-217	82.38	PREDICTED: F-box/WD-40 repeat-containing protein At3g52030 [Cucumis melo]	[more]
XP_004135950.1	3.2e-216	81.53	F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Cucumis sativus] >KG...	[more]
XP_022149888.1	3.7e-204	77.92	F-box/WD-40 repeat-containing protein At3g52030 isoform X1 [Momordica charantia]	[more]

BLAST of Clc09G04720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SV01	2.5e-110	46.80	F-box/WD-40 repeat-containing protein At3g52030 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Clc09G04720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CFV2	2.4e-217	82.59	F-box/WD-40 repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CEH9	4.1e-217	82.38	F-box/WD-40 repeat-containing protein At3g52030 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KBD6	1.6e-216	81.53	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420840 PE=4 ...	[more]
A0A6J1D7Z0	1.8e-204	77.92	F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Momordica charanti...	[more]
A0A6J1HB56	3.7e-202	77.07	F-box/WD-40 repeat-containing protein At3g52030 isoform X1 OS=Cucurbita moschata...	[more]

BLAST of Clc09G04720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52030.2	3.4e-115	48.92	F-box family protein with WD40/YVTN repeat doamin	[more]
AT3G52030.1	1.8e-111	46.80	F-box family protein with WD40/YVTN repeat doamin	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 310..350 e-value: 0.41 score: 19.4 coord: 353..393 e-value: 15.0 score: 9.5 coord: 269..307 e-value: 38.0 score: 7.1 coord: 430..468 e-value: 41.0 score: 6.8
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 26..66 e-value: 1.3E-7 score: 41.2
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 24..67 e-value: 3.3E-8 score: 33.2
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 20..66 score: 9.232525
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 235..471 e-value: 1.2E-25 score: 91.9
None	No IPR available	GENE3D	1.20.1280.50		coord: 9..105 e-value: 1.3E-11 score: 46.3
None	No IPR available	PANTHER	PTHR22847:SF668	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 2..225
None	No IPR available	PANTHER	PTHR22847:SF668	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 240..470
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 240..470
None	No IPR available	PANTHER	PTHR22847	WD40 REPEAT PROTEIN	coord: 2..225
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 14..74
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 154..470

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G04720.2	Clc09G04720.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051568	histone H3-K4 methylation
cellular_component	GO:0048188	Set1C/COMPASS complex
molecular_function	GO:0042393	histone binding
molecular_function	GO:0005515	protein binding