Clc09G04625 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTAAATCTGCTGTGTTTTGATATGCTATCCCATGAGTATATTGTAGGTCACATGTATATGGGACTCGACAATCTATTTGCTAAATGAATTATCTCTTTCATTTTAAAATCTATAGTTCTTATTGTGTGTGTACATCAAACATTAGAGCTCATGGTGGTCGATTGTCTCAATTTATTTCGGTTGCATTTAAAATGGTCTGAACGATTATTTGTCTAGGGAACTCACAAGTTTGATTCGCTGCTACTTTTCCTTGGTTACCATCTCCGATATTTTACTAGATTGTCTGTTGGTGGATGAAGGTTTGGATTGATATTGATTGAAGTTGTGACAGTGAATTTACTGGCATTAGATTCAGTGGTCTGGTAATCTGTTATTCGAATTCTATGTCATTGTGAATCTCCTGTTTTGTTTGGGTCTTAGGCTGAACAGTCACAGGTTAGAAGCCTTCGTTGATATTTCAAATGAAATATTTGAGTTAAGAATGTAAAATTTTGGGATGCATTATGTGTATTTCTATTGATTTTTTGATTTCCACAAAAACCTGAGGTTGCATTGGCATTTTCACCAACCAGGTGCTTTCTATCTGTTTCACCTGCACATAAAAGCACAAATTTTGCCAGATACCCATAAAAAAATACAGATAAAACCCAGAATATATAGATAGAAAGAGAAACGAAAAATTGCACATTGCATTGCAAGTGGGTATTGGGTTAGGAAGATAGTGTAAGAAAGCATGAGTTACTCTCAATATAAGCAACACTAGAGTATACGTTCTTCATCTCAACTTAACTTGAGAATTTATCTGTAGTCAAAGATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATGTAAATTTTTTTCTTGCATCCTGATCTCTACATCTTTCAAGTTGTTTTTGTGTTGAAGACGGTTGGAATGTCTTGAATCTGATATTGCTTTATGTTTTCTGTTCATCTTTGATTGTTGATTTCTTAACAAAGATTCATGAGAAACTTGGTTTTGTTTTTGGGTTTCTATTGCAGGTTTCTAGTAGTTGGAAGATGGTGGGACTGTGCGAAAATGATGAATAAAAATGTTATAGCTGGATATATGTTTAAGTAAGAATAAATGTTTGTTTCAACTTTGGGATGAGAATAACTTTGGTTGTTTTCTAACTGAGATTCTTAGAGGTGCTTCATTTGGACTCTTTGGTTGCAGGATGAGTTTGATGAGTCATGTGATATATAGATGTGGAGTTGAGATTTCTATTCATAATTTGACATGTTATTAGATAATATATAATTTCTTATCTTTATTACACCTTGCATTGATCTTAGATGTTATGACGAGCAATGAAGGTACGTCAGTACTAGAAGTTTTTTCCTCATTAACGTGATTGAATTGTGATTAGACGAATTATGAATCATTTCATTGAAATTGATTTATACAATCTTGATATGTGGAGGTGAGGATGATTGCCAAATACTATGTATATACTCTTAAAACAGTATCTTGA ATGGTTTGTGACAGTGAATTTACTGGCATTAGATTCAGTGGTCTGTCAAAGATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATTATCTTGA ATGGTTTGTGACAGTGAATTTACTGGCATTAGATTCAGTGGTCTGTCAAAGATGAAACAGGCAAAGTTTAAGACCCTGCAATTTCTAGTGTTCATGATGGCCATTGCATGCTTTCTGGGGCAAGGTAAAGCCAAGTTCTGTTCTAACAGTCTGATTTCCTCTCTTGTTCAACTAATTCCTTGCAGGCCTGCACTGTCTCCATTCCACCCCATCCCACCAAGTCTTCTCTGCTGCAATGCCATCAAAACTCTGGGCCAGTCCTGTCTTTGTGCACTGTTGGATGCCCCCCCGGTTTCTGGTGTTGATTACAACTTGGCCATGTCTCTGCCTCAGAAGTGCGCTACAAATTTCGACCCATTATCTTGA MVCDSEFTGIRFSGLSKMKQAKFKTLQFLVFMMAIACFLGQGKAKFCSNSLISSLVQLIPCRPALSPFHPIPPSLLCCNAIKTLGQSCLCALLDAPPVSGVDYNLAMSLPQKCATNFDPLS Homology
BLAST of Clc09G04625 vs. NCBI nr
Match: XP_038900004.1 (non-specific lipid-transfer protein P5-like [Benincasa hispida]) HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
BLAST of Clc09G04625 vs. NCBI nr
Match: XP_008461263.1 (PREDICTED: protein LIM1-like [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43 Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Clc09G04625 vs. NCBI nr
Match: KGN45155.1 (hypothetical protein Csa_016316 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43 Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0
BLAST of Clc09G04625 vs. NCBI nr
Match: XP_023514059.1 (putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38 Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 0
BLAST of Clc09G04625 vs. NCBI nr
Match: KAG7025667.1 (hypothetical protein SDJN02_12165, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167.5 bits (423), Expect = 6.9e-38 Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Clc09G04625 vs. ExPASy TrEMBL
Match: A0A1S3CEQ8 (protein LIM1-like OS=Cucumis melo OX=3656 GN=LOC103499902 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 9.0e-44 Identity = 88/102 (86.27%), Postives = 97/102 (95.10%), Query Frame = 0
BLAST of Clc09G04625 vs. ExPASy TrEMBL
Match: A0A0A0K635 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428920 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43 Identity = 88/102 (86.27%), Postives = 95/102 (93.14%), Query Frame = 0
BLAST of Clc09G04625 vs. ExPASy TrEMBL
Match: A0A6J1KX32 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111497920 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.3e-38 Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Clc09G04625 vs. ExPASy TrEMBL
Match: A5AEY0 (AAI domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_043972 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 5.3e-28 Identity = 61/108 (56.48%), Postives = 79/108 (73.15%), Query Frame = 0
BLAST of Clc09G04625 vs. ExPASy TrEMBL
Match: A0A7J7CQM1 (Protein M7-like OS=Tripterygium wilfordii OX=458696 GN=HS088_TW14G00555 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.9e-26 Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0
BLAST of Clc09G04625 vs. TAIR 10
Match: AT3G52130.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 101.7 bits (252), Expect = 4.3e-22 Identity = 41/73 (56.16%), Postives = 58/73 (79.45%), Query Frame = 0
BLAST of Clc09G04625 vs. TAIR 10
Match: AT3G07450.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 6.2e-21 Identity = 46/102 (45.10%), Postives = 68/102 (66.67%), Query Frame = 0
BLAST of Clc09G04625 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 55.8 bits (133), Expect = 2.7e-08 Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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