Clc09G04450 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G04450
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	E3 ubiquitin ligase BIG BROTHER
Location	ClcChr09: 3557341 .. 3561085 (-)
RNA-Seq Expression	Clc09G04450
Synteny	Clc09G04450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAACCAGCTTAAAAACCTTCATTTGCACGGAGATGGAAAAATGGATTATAGCCAGAAAACAAATTGAAGAACAAAGAAAGAAAGGGAACACAAACCCATAACCCCATTTCCTTTCATTTTCTCATCTCTCTCTGCTAAAACTCTGCCAGAAATCAAGAGTTTTGAAGAGAGAGGCATAGAAGAAAAAGAAAAAAAAAAAAAAAAAAGGAATTCTAGAGAGAGAGTTAAAGGTCCATCCTCCATTTCTCAAGCTTCCCTTCTACTGCATTTCTCAAGCTTGTTTGTTTGTTAAGTTTTAGAAGAAGAATCCTTTTCTATTTTCTACATTTTTTTTTGTTCTACTTCTGTTTTTCTCTGTTTTATTGCGAATATTATGAAGATTCTAATGAATACTGGGATCTGTACCTGTTTATTTTTTGCTCATTTGTCTGCATTTATCTGATTCTTAGGATTCTCTAACGTCTTTTCTGCTCATTTGTCTACATTTGTCCAATTCCTCAGGTTTTTCCTCTGTCAGAGTGTGAAGAGGTTTCTTGGGGGAGTTTCTGTTTGGCTATCCAGAAAGAAAAATCATAGGATTTTGCCTTGCTTTTTCATTTTGGAGACAAAAGAAGTTAAATGTAAGTTTTTCTTTTGGTTTTGTGTAATGTTAATGTTAGTTTTTGTTTTTGTTTGAGTGTTTTAGGGCCTGTTTCCTATTTCATTGGAATAGAAAATTTCAAATCTGCAATTTCCTTAGCTTTCTCACCTTTTCCCCTAAGTTTTCTTGGCAACCAAACATATGTTTGTGGATAAGTTCATTCTATGGAAAGAACATTACATATTGCTTGAAATTTCCAAAGCTTTGACAATGTAGGTTTTAAGTTCATTTCATATTTCCTTTTGTTTGATATTTTCTTTTCTATTTGGTGTTTTTGCAAATTCTACTGTTGGTTGCTGCTTAAGATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGTAATAATGTGGCCATGAAAAACCGATATAATTTGTCATTACACTAACTTGAGTTTTGTCAGTTGAGAGAACAATAAGTACTGGAAATGTACGGTAATTTGTGTCTCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGTAAGTGTTGACAAATCTGATACTCAGTCTGTTTATTTCATACTTTTGAAAGCCAACATTGAGTTTGTCACTATCATATTGTCGAGTTGAATCGTTGAAATTGTTTGAGAAACATAATATTTGTGCATCTTATCAGCATCTTTTTACTTTTTTTTTTTTCCTGTTTTGTAGGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTATGATGCTTTCTCCTTGATTTTGCGATATGCCTCCTTTTCTGTTATGACCATCATCTACTTAATGCCTCGAATGAACTGTGCTTAATCAAAAAGTTGTTTGGGATCGTTTTTCTTATTCGTTACATAATGAATTAGGGTATAATCTTATCATCATCAAAGGTTGTAGTATGTTCATTTATCATTCTGAAGTTATGTGGGTGATGAATTTATTTTCTTCTCAAGTTATAGTTTCTCGTGCCAAAATGTCTCTCTTTCTAATCAGTTTTGTGGCCGACGAAGTTTCTTTGTTTTCACACTATGAAATTAGCTACTGTTTTGGTTTATAGCTCATTGAATCCGTCTTATTTTGTTTGTCTCTTCAGGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGTATGGTTTCAACTCTATCATTTAGAAACCAGATTTGTTCAAGAACATGCTGTTTTAAGAAACGTTCTGTAGATCTTCAATTGATTGCCCTATAGAAGTTGAGGGTTTACCGAGCATGTGATTATTTGGCTCAATTATCAACAAACCCGTAGTTTCTTATGGCCACATGAACTATGGTTGGTTGTCAAATAAATGGGATCCATTGAAGTTTACTAGAAGAGCACAAAGGGAGTCTTTAGCCATGACCGTGGATCATCTTATATGGTTTTACAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGGTATGGTTTTTTGACATATGTTGCATTTGGCTATCTTGCACTGTTAGTCTGCTTTACTTGGTGGATATAAGAACATTCCTGTCAAGAAAACATTGAATGATCTATCAAATAATCGGTTCAGTTGATATTTAGACAACAATCTCTGCGAACTGAGATGTACAACGTTGTCATTACACTATGCTTGTTTCTGATGTGTCTACTCTGAAAGTCATATGGATCTATTTTTGCTGCCATAATACACAAGTTAAAACAGTCGGTACTTTCCCGTACGGTGTTTATGTAGCAATGTCAAACTCGAATCTCTAAAAAGTTTTACAAATAAAATAGTCATATGAGATACACTCCTTAGAGTATGATCATGTTCTTGGAGTTGTCTCAAGTTACTGACTATAGATCTCGGTAAAAGAAGGTGTTTACATCTCGGTTCTTCTTGGTAAGGTGCTTACTCTTGGAGCTTCAGTATTTGATTGTACTTGTTTTGTTTTGTTCTTTTTTTTTTTTACTGCAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTTAGTTATTTTCTTGGCTTTCTCATGTATTTATACTTGCACGATTTCTGATCTAACTTGGTATATCATCACGCCACATCATCTTCGTGTTTATCAGATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGACAGTAGATTGTGGAAGCTCTAACATTTTGTTCCTCCTTGTTTATCTTTTCACATTTTTGCCTTCTCACTTTCATTTCTCTCCCCCACCATTTTGTACATCTCTACTTAACTAAGTGAATTAAGTACTCTAATCCTTAATCTCTCTCCCCACACTTGCCTTATGCTCAAGAGAAAGAAAGAAAAGTGTACCCCTCTTTTAACTTTTCAACTGCTTAGCTTGAAGATTTAAGTCTAGCTATTTTCTTAGATTAAGATTAACTTATTTTGTAGTCATTTTTCGAATTGAGGGCCGTGTCGAACTGCATTGAATAAGGATGTTCGTAGGTTGGGGTGAGTTAGATTAGGTTAGTATTGACATTTTGGACCTAACCCAATTGTTCGAGTTACATATTTGTTCGATCTAAGTGACTTTTATTAATAGTAGACCATGAGTTCATCTGGTCATTTACTTCAAGTTTTGTAAAAGAAATAGTGAATGATAATGAGCATCTATTTACTTATTTTCA

mRNA sequence

CATCAACCAGCTTAAAAACCTTCATTTGCACGGAGATGGAAAAATGGATTATAGCCAGAAAACAAATTGAAGAACAAAGAAAGAAAGGGAACACAAACCCATAACCCCATTTCCTTTCATTTTCTCATCTCTCTCTGCTAAAACTCTGCCAGAAATCAAGAGTTTTGAAGAGAGAGGCATAGAAGAAAAAGAAAAAAAAAAAAAAAAAAGGAATTCTAGAGAGAGAGTTAAAGGTTTTTCCTCTGTCAGAGTGTGAAGAGGTTTCTTGGGGGAGTTTCTGTTTGGCTATCCAGAAAGAAAAATCATAGGATTTTGCCTTGCTTTTTCATTTTGGAGACAAAAGAAGTTAAATATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTTAGTTATTTTCTTGGCTTTCTCATATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGACAGTAGATTGTGGAAGCTCTAACATTTTGTTCCTCCTTGTTTATCTTTTCACATTTTTGCCTTCTCACTTTCATTTCTCTCCCCCACCATTTTGTACATCTCTACTTAACTAAGTGAATTAAGTACTCTAATCCTTAATCTCTCTCCCCACACTTGCCTTATGCTCAAGAGAAAGAAAGAAAAGTGTACCCCTCTTTTAACTTTTCAACTGCTTAGCTTGAAGATTTAAGTCTAGCTATTTTCTTAGATTAAGATTAACTTATTTTGTAGTCATTTTTCGAATTGAGGGCCGTGTCGAACTGCATTGAATAAGGATGTTCGTAGGTTGGGGTGAGTTAGATTAGGTTAGTATTGACATTTTGGACCTAACCCAATTGTTCGAGTTACATATTTGTTCGATCTAAGTGACTTTTATTAATAGTAGACCATGAGTTCATCTGGTCATTTACTTCAAGTTTTGTAAAAGAAATAGTGAATGATAATGAGCATCTATTTACTTATTTTCA

Coding sequence (CDS)

ATGAATGAGGATAGACAAATGGAAGTACATTATGTTGACACCGGGTTCCCTTACACGGTTACGGAGAGCTTCATGGATTTCTTTGAAGGGCTTCACCAACATCAAGTGCCTGCTTATGGCAATGCCGTGCCATTGCTCGATCAGGGAAATGCTTACTGGTCAATGAATATGCAATGTTACAAATTTGGAGTATCTGATCATGGGAATACGTATTATGGCCATTCGCATTCGGAGAGTCACCATTTACCACCTTCATTGGATGTTGGTGAAAGGGAATGGGAGTATCCTACTTCAGTGGTGAATGTCGAAATTCCCGAACCAACATATGCGCCATCCGTGGAGGAGGATGTAGTAGATGCTCATTCTATACCAGAAGAATGCGATTTAAGCCATCAGGAGGAGACCAGTACTTCTCAAGTTACATGGCAAGATGAGATTGATCCTGACCACATGACCTATGAGGAACTGTTGGACTTGGGTGAATCAGTTGGAACTGAAAGTCGGGGTCTTTCTGAAGAACAAATAAGTTTGCTTCCGACTGCACGATGCAAGTTAACGAGTTTTTTCTCGAGGAAAAAGCCTGAGGAGAGATGCGTTATTTGCCAAATGAGGTACAAGAGAGGGGACAAACAAATAAAATTACCCTGCAAGCATTTCTACCACAACAAATGCATAACCAAATGGCTCACCATCAACAAAGTTAGTTATTTTCTTGGCTTTCTCATATATGTCCGATCTGCAACATCGAGGTGTTCGGAGACGAAAGCACGAATGCATTGGGCAGCGATAACTGACAGTAGATTGTGGAAGCTCTAA

Protein sequence

MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKVSYFLGFLIYVRSATSRCSETKARMHWAAITDSRLWKL

Homology

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BLAST of Clc09G04450 vs. NCBI nr
Match: XP_038899262.1 (E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899264.1 E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida])

HSP 1 Score: 478.0 bits (1229), Expect = 5.3e-131
Identity = 227/234 (97.01%), Postives = 230/234 (98.29%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQMEVHY+DTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTSV NVEIPEPTYAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSVANVEIPEPTYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           AR KLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARFKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

[Close]

BLAST of Clc09G04450 vs. NCBI nr
Match: XP_008461282.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_008461283.1 PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo])

HSP 1 Score: 468.4 bits (1204), Expect = 4.2e-128
Identity = 221/234 (94.44%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

[Close]

BLAST of Clc09G04450 vs. NCBI nr
Match: XP_011659453.1 (E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >KAE8646405.1 hypothetical protein Csa_015770 [Cucumis sativus])

HSP 1 Score: 467.2 bits (1201), Expect = 9.4e-128
Identity = 220/234 (94.02%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS +NVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

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BLAST of Clc09G04450 vs. NCBI nr
Match: TYK10442.1 (E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 466.1 bits (1198), Expect = 2.1e-127
Identity = 220/234 (94.02%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

[Close]

BLAST of Clc09G04450 vs. NCBI nr
Match: XP_008461284.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124
Identity = 215/228 (94.30%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 227

[Close]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot
Match: Q8L649 (E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE=1 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.3e-57
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 1   MNEDRQ--MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVV 120
            YKFG S   N  +  S+  + HL   + +G   W+Y   V   + PE T A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV+WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INKV
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKV 233

[Close]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot
Match: Q9LT17 (E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.1e-21
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 132 QEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 191
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 192 KKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
               E CVIC++ Y+  +  I LPCKH YH++CI  WL INKV
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKV 324

[Close]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot
Match: O49500 (E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.7e-10
Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRY 205
           +D D+M+YEELL LGE +G  S GLSEE I  +       +S     +  E C +CQ  Y
Sbjct: 567 LDVDNMSYEELLALGERIGDVSTGLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEY 626

Query: 206 KRGDKQIKLPCKHFYHNKCITKWLTINKV 235
             GD    L C H +H  C+ +WL +  +
Sbjct: 627 AEGDDLGTLGCGHEFHTACVKQWLMLKNL 655

[Close]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot
Match: Q7XTV7 (Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 1.1e-09
Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSRKKPEERCVICQMRY 205
           +D D+M+YEELL L E +G  S GLSEE+++ L   R   +        EE C ICQ  Y
Sbjct: 568 LDIDNMSYEELLALEERIGNVSTGLSEEEVTKLLKQRKFSSWRLEASVEEEPCCICQEEY 627

Query: 206 KRGDKQIKLPCKHFYHNKCITKWLTI 232
             GD    L C H +H  C+ +WL +
Sbjct: 628 VDGDDLGTLDCGHDFHVGCVRQWLVV 653

[Close]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot
Match: Q9ZQF9 (E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.2e-09
Identity = 39/93 (41.94%), Postives = 49/93 (52.69%), Query Frame = 0


Query: 146 IDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT----SFFSRKKPEERCVIC 205
           +D D+M+YEELL LGE +G  S GLSEE I L    + K T    S     +  E C IC
Sbjct: 601 LDVDNMSYEELLALGERIGDVSTGLSEEVI-LKAMKQHKHTSSSPSSVELHQNIEPCCIC 660

Query: 206 QMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           Q  Y  GD    L C H +H  CI +W+ I  +
Sbjct: 661 QEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNL 692

[Close]

BLAST of Clc09G04450 vs. ExPASy TrEMBL
Match: A0A1S3CED1 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128
Identity = 221/234 (94.44%), Postives = 229/234 (97.86%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

[Close]

BLAST of Clc09G04450 vs. ExPASy TrEMBL
Match: A0A5D3CGQ8 (E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00890 PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 1.0e-127
Identity = 220/234 (94.02%), Postives = 228/234 (97.44%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSDHGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDA
Sbjct: 61  KFGVSDHGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDA 120

Query: 121 HSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180
           HSIPEECDLSH+EETSTSQV WQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT
Sbjct: 121 HSIPEECDLSHREETSTSQVIWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPT 180

Query: 181 ARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ARCKLTSFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 ARCKLTSFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 233

[Close]

BLAST of Clc09G04450 vs. ExPASy TrEMBL
Match: A0A1S3CES7 (E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499919 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 1.1e-124
Identity = 215/228 (94.30%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS VNVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAVNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 227

[Close]

BLAST of Clc09G04450 vs. ExPASy TrEMBL
Match: A0A0A0K8C4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.3e-124
Identity = 214/228 (93.86%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 7   MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 66
           ME+HY+DTGFPYT TESFMDFF+GLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD
Sbjct: 1   MELHYMDTGFPYTNTESFMDFFQGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCYKFGVSD 60

Query: 67  HGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDAHSIPEE 126
           HGNTYYGHS  ESHHLPPS+DVGEREWEYPTS +NVEIPEP+YAPSVEEDVVDAHSIPEE
Sbjct: 61  HGNTYYGHS-EESHHLPPSMDVGEREWEYPTSAMNVEIPEPSYAPSVEEDVVDAHSIPEE 120

Query: 127 CDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 186
           CDLSH+EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT
Sbjct: 121 CDLSHREETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLT 180

Query: 187 SFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           SFFSRKK +ERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 SFFSRKKLDERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 227

[Close]

BLAST of Clc09G04450 vs. ExPASy TrEMBL
Match: A0A6J1D3R4 (E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 6.0e-120
Identity = 214/236 (90.68%), Postives = 220/236 (93.22%), Query Frame = 0


Query: 1   MNEDRQMEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQCY 60
           MNEDRQMEVHY+DTGFPYT TESFMDFFEGLH HQVPAYGNA PLLDQGNAYWSMNMQCY
Sbjct: 1   MNEDRQMEVHYIDTGFPYTTTESFMDFFEGLHHHQVPAYGNAGPLLDQGNAYWSMNMQCY 60

Query: 61  KFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVVDA 120
           KFGVSD GNTYYGHS  ESHHLPPS+D+GER WEYP S V VE PEPTYAPSVEEDVVDA
Sbjct: 61  KFGVSDPGNTYYGHS-EESHHLPPSMDIGERGWEYP-STVTVENPEPTYAPSVEEDVVDA 120

Query: 121 HSIP-EECDLSHQ-EETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           H IP EECD SHQ EETSTSQV WQDEIDPDHMTYEELLDLGESVGT+SRGLSEEQISLL
Sbjct: 121 HFIPEEECDFSHQEEETSTSQVVWQDEIDPDHMTYEELLDLGESVGTQSRGLSEEQISLL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           PTA+CKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINK+
Sbjct: 181 PTAKCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKI 234

[Close]

BLAST of Clc09G04450 vs. TAIR 10
Match: AT3G63530.1 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.8e-58
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 1   MNEDRQ--MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVV 120
            YKFG S   N  +  S+  + HL   + +G   W+Y   V   + PE T A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV+WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INKV
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKV 233

[Close]

BLAST of Clc09G04450 vs. TAIR 10
Match: AT3G63530.2 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.8e-58
Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 0


Query: 1   MNEDRQ--MEVHYVDTGFPYTVTESFMDFFEGLHQHQVPAYGNAVPLLDQGNAYWSMNMQ 60
           MN D +   + HY +TGFPY  T S+MDF+ G  Q  +  Y +A  +  Q N YW+MN  
Sbjct: 1   MNGDNRPVEDAHYTETGFPYAATGSYMDFYGGAAQGPL-NYDHAATMHPQDNLYWTMNTN 60

Query: 61  CYKFGVSDHGNTYYGHSHSESHHLPPSLDVGEREWEYPTSVVNVEIPEPTYAPSVEEDVV 120
            YKFG S   N  +  S+  + HL   + +G   W+Y   V   + PE T A SV+    
Sbjct: 61  AYKFGFSGSDNASFYGSYDMNDHL-SRMSIGRTNWDYHPMVNVADDPENTVARSVQIGDT 120

Query: 121 DAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLL 180
           D HS  EEC ++++ +  + QV+WQD+IDPD MTYEEL++LGE+VGTESRGLS+E I  L
Sbjct: 121 DEHSEAEEC-IANEHDPDSPQVSWQDDIDPDTMTYEELVELGEAVGTESRGLSQELIETL 180

Query: 181 PTARCKLTSFFSRKKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           PT + K  S FSRK+  ERCVICQ++YK G++Q+ LPCKH YH++CI+KWL+INKV
Sbjct: 181 PTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKV 233

[Close]

BLAST of Clc09G04450 vs. TAIR 10
Match: AT3G19910.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 4.3e-22
Identity = 53/103 (51.46%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 132 QEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTARCKLTSFFSR 191
           ++E+ TSQ  W DE+DPD ++YEELL LG+ VGTESRGLS + I+ LP+ R K     ++
Sbjct: 225 EDESHTSQDAW-DEMDPDELSYEELLALGDIVGTESRGLSADTIASLPSKRYKEGD--NQ 284

Query: 192 KKPEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
               E CVIC++ Y+  +  I LPCKH YH++CI  WL INKV
Sbjct: 285 NGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKV 324

[Close]

BLAST of Clc09G04450 vs. TAIR 10
Match: AT5G52140.1 (RING/U-box superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17
Identity = 49/113 (43.36%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 130 SHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSEEQISLLPTAR--CKLTS 189
           +H   + +   T  +  DP++MTYEEL +LG+SVG   +GLS+E+IS L T +   K  S
Sbjct: 158 THSPSSISHNPTDDENNDPENMTYEELTELGDSVGDVGKGLSQERISRLRTHKYGTKTKS 217

Query: 190 FF---SRKK---PEERCVICQMRYKRGDKQIKLPCKHFYHNKCITKWLTINKV 235
           ++    +KK    + +C IC M Y +GDK   LPCKH YH  CI++WL  NKV
Sbjct: 218 WYCLHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKV 270

[Close]

BLAST of Clc09G04450 vs. TAIR 10
Match: AT3G47180.1 (RING/U-box superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 7.2e-17
Identity = 50/124 (40.32%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 113 VEEDVVDAHSIPEECDLSHQEETSTSQVTWQDEIDPDHMTYEELLDLGESVGTESRGLSE 172
           V+ED ++     +E + + +EE    +   +DEIDPD ++YEEL+ LG+ +G E+RGL+ 
Sbjct: 81  VDEDEINEFLEDQESNSNLEEEDDFLEE--EDEIDPDQLSYEELIALGDFIGVENRGLTP 140

Query: 173 EQISLLPTARCKLTSFFSRKKPE-ERCVICQMRYKRGDKQIKL-PCKHFYHNKCITKWLT 232
            +IS    A    T  FS  K E +RCV+CQM ++  +  + L PC H YH++CITKWL 
Sbjct: 141 IEISTCLNAS---TYVFSHNKNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLE 199

Query: 233 INKV 235
             K+
Sbjct: 201 TKKI 199

The following BLAST results are available for this feature:

BLAST of Clc09G04450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899262.1	5.3e-131	97.01	E3 ubiquitin-protein ligase BIG BROTHER [Benincasa hispida] >XP_038899263.1 E3 u...	[more]
XP_008461282.1	4.2e-128	94.44	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo] >XP_0084612...	[more]
XP_011659453.1	9.4e-128	94.02	E3 ubiquitin-protein ligase BIG BROTHER [Cucumis sativus] >XP_011659454.1 E3 ubi...	[more]
TYK10442.1	2.1e-127	94.02	E3 ubiquitin ligase BIG BROTHER isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008461284.1	2.2e-124	94.30	PREDICTED: E3 ubiquitin ligase BIG BROTHER isoform X2 [Cucumis melo]	[more]

BLAST of Clc09G04450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L649	5.3e-57	48.73	E3 ubiquitin-protein ligase BIG BROTHER OS=Arabidopsis thaliana OX=3702 GN=BB PE...	[more]
Q9LT17	6.1e-21	51.46	E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana OX=3702 GN=BBR P...	[more]
O49500	3.7e-10	38.20	E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV...	[more]
Q7XTV7	1.1e-09	40.70	Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9ZQF9	9.2e-09	41.94	E3 ubiquitin-protein ligase MBR1 OS=Arabidopsis thaliana OX=3702 GN=MBR1 PE=1 SV...	[more]

BLAST of Clc09G04450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CED1	2.0e-128	94.44	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A5D3CGQ8	1.0e-127	94.02	E3 ubiquitin ligase BIG BROTHER isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CES7	1.1e-124	94.30	E3 ubiquitin ligase BIG BROTHER isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034999...	[more]
A0A0A0K8C4	2.3e-124	93.86	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428220 P...	[more]
A0A6J1D3R4	6.0e-120	90.68	E3 ubiquitin ligase BIG BROTHER OS=Momordica charantia OX=3673 GN=LOC111017324 P...	[more]

BLAST of Clc09G04450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63530.1	3.8e-58	48.73	RING/U-box superfamily protein	[more]
AT3G63530.2	3.8e-58	48.73	RING/U-box superfamily protein	[more]
AT3G19910.1	4.3e-22	51.46	RING/U-box superfamily protein	[more]
AT5G52140.1	1.1e-17	43.36	RING/U-box superfamily protein	[more]
AT3G47180.1	7.2e-17	40.32	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 197..232 e-value: 8.3E-9 score: 35.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 198..255 score: 8.683004
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 160..236 e-value: 1.6E-13 score: 52.1
IPR033276	E3 ubiquitin-protein ligase BIG BROTHER	PANTHER	PTHR46400	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..235
None	No IPR available	PANTHER	PTHR46400:SF3	E3 UBIQUITIN-PROTEIN LIGASE BIG BROTHER	coord: 1..235
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 194..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G04450.2	Clc09G04450.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048437	floral organ development
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0046621	negative regulation of organ growth
biological_process	GO:1900057	positive regulation of leaf senescence
biological_process	GO:0051865	protein autoubiquitination
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity