Clc09G03930 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G03930
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr09: 3047647 .. 3050006 (+)
RNA-Seq ExpressionClc09G03930
SyntenyClc09G03930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGGTCGTACGTGGCGGGTTCTTATTGGCCAGGAGTTTCTGACTAGAATCTCGACCGTACAAAGCCACCACCGTCCTTTGGAAGTATCCTCGTCCCGTTGTCCAATTTTAGTGTTTCTTTTGTGAGTTTTATGCATTATTATTTTTCTTTTTCTTCTACTTAATATATATATATTTTTCCTTTTCCCAATCTTGTTTTATTATAATGGTGGAGCAACTTTATCTCGATGTGATTGAACTTATATTTAACTTTTTTTTTCTTCAAATTTTATATTTAAATGTGATATGAAAATGATTTTAGTAATACCACATGTCACTTATTGAATTGGAATATGTAAATAAAGGTGTATAACAAAGTAGAAACGATAATGAAAGATGCAATTAACTGTATCGTTTTTCTTTTTTATCTTGAATTTTGTCTTTTTATCATTCAATTTAAAATTTTTGTTATTGGATTAAATCTCTAAAAGAAAATTATTGTTTTCTGGGCGTAAGTTGAATTGAAGAGATTTTTTTCTATTCACATTATGGAAAAAAATTGCTAGAAAAAAAGATGTTTGTTCTTATCTACAACCTGACAAAGGTTGAATTTTAATACATCCACAATTCAATTTTTTTTTTTTCATATTTAGTGTGTATATTTAAAATAAAAATTCAAGCATTCAATTCGTTATTGATGCTAATTTTATTATATTTAGATCAAAATTTTAATTCACAATCAATAAAAGGAATTAGTTATTTTAACGTGTTGTTTGAATATCTCTTTTAAAATGTAGTAAGATTATATTAAATGCTCATCAACAATTATTGAACATTCAATTTGTATGTGTTGCTTGAATTCCTTCCATGATTATTCAATAATTGAAACTACTCATTGAAGTTGAATAATTCTTTTGATTAAGGGAGAATATATTTTTTTGCTTTAAGGAAAAAGGTACAATAATACTAACCTACCCAACAATAAGGATAAACATCAAACCTTTTGATGAAGAAGTACATTTTTAATTAGTCTAGTTATATTAGAAGGAAACCTCTGTACTTTTTTTTTTTTTTTTTTGGACAATACGTGGGAGGGGAGAATCAAGACTTTGAGGTTGATAATATAAGCACTATGTCAGTTATGCTATGTTCATTTTAGCATACATCATCTCTTCCTTCCATTGTTCACACTACCATTTTTTTCCCTACATAATTGATTTCATTGTTACTACACATGTTTTTTAAAAATTAAATATCAACGTAAGCAATAGTGAAAAAAAATGACACTAGATACCACCAGTCATTACTAAATAATACCTTTTACTTGCTAAAAAGTACACTCTAAAATTGGAAAATTTTCAAGTAATACCGAGAGTCATCTCATACTCATTTTGTTTCACTAAGGGGTTGTTTTGCCCACACCTATTAAATCGATGTAAACAACTCAACTTCAGTAGTAAACACTATTGAAGGTTGCACATATATTGAGTAATTTTATATATCTTCATCTTTTTTTATATTTTTAATATTTATTAAGAAACTTCATCTTTCTCATCATCTCTAATTTCACATTTATTGATTATATCTACATTTTCCTCTTTCTTCACATTTCATGTTCATCAAGAAATTTCATCTTATAACTCTACACTCAAGTACAAGTTTTTCTAACTTCAAATTACTTATTAACTCTATTCAATGGGCCAAACAATCCTTGAAATTTTTTCTTTATAAATATTAATAGACTCATAGTAATGTCATGTAATAGTTTCTAATAGTTTCATTTACATGCTGATGCGACATACAATAGACGCAGAGAGGTAAGTAAAGTCTATCAAAAAGTCAATAAAACCTGGACGAAGGCAAATATTTAATTCCAAAATGAAATATGAGAGAGAGAGATAAAGTAAGGAATAAAAATCCAATTTTCCATTTCCCACTTATATATAAAGCCTTTGTAGCCACATAAATTTTCCCACTAAACCAACAAAACAAGTCCTACATATAACCAAAACACACACCACTTTTTCTTCCTAAATCCCCTCAGAAGCTCTCAAAGCCCCCGCCCATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGTTTCTTCTTCCTCATCCTCCTCATGTTCTTATCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATTGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATACCGAGAATGGCCGCCTGCCGCCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTCGGGTTTTTGTTAG

mRNA sequence

ATGGCCGGTCGTACGTGGCGGGTTCTTATTGGCCAGGAGTTTCTGACTAGAATCTCGACCGTACAAAGCCACCACCGTCCTTTGGAAGTATCCTCGTCCCGTTGTCCAATTTTAGTGTTTCTTTTAAGCTCTCAAAGCCCCCGCCCATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGTTTCTTCTTCCTCATCCTCCTCATGTTCTTATCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATTGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATACCGAGAATGGCCGCCTGCCGCCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTCGGGTTTTTGTTAG

Coding sequence (CDS)

ATGGCCGGTCGTACGTGGCGGGTTCTTATTGGCCAGGAGTTTCTGACTAGAATCTCGACCGTACAAAGCCACCACCGTCCTTTGGAAGTATCCTCGTCCCGTTGTCCAATTTTAGTGTTTCTTTTAAGCTCTCAAAGCCCCCGCCCATGGCTGCCAACGGAGGCTCCTCCGCCGCAAATTCCCACTCTCAGCCCACTTTTCCCCTTCATCTCTGTTTCTTCTTCCTCATCCTCCTCATGTTCTTATCCTTCTCTTGGTACTCCAACTACGAGTCCGCCGTCGAAGGCGTTTTCGATCAACTCAAGCTCCTCCTCATTGTCTCGCCGCTCCTCCTCCTCCTCCTCGTCCACTGGCTCTCCAATACCGAGAATGGCCGCCTGCCGCCCCTCATCCCCCTACCGGAAAAAGACTCGCTCCACCGCGCTGGAGGGACACCGTGGGGAGTCGGGTTTTTGTTAG

Protein sequence

MAGRTWRVLIGQEFLTRISTVQSHHRPLEVSSSRCPILVFLLSSQSPRPWLPTEAPPPQIPTLSPLFPFISVSSSSSSSCSYPSLGTPTTSPPSKAFSINSSSSSLSRRSSSSSSSTGSPIPRMAACRPSSPYRKKTRSTALEGHRGESGFC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G03930.1Clc09G03930.1mRNA