Clc09G03340 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G03340
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionserine-rich protein-related
LocationClcChr09: 2575948 .. 2578648 (-)
RNA-Seq ExpressionClc09G03340
SyntenyClc09G03340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATATTCGATATGTCCCTAAGTCTCTTATGATCATCGATCCTGATTCCTATACTCCACAGGAAATTGCAATTGGTCCATGCCATCACTGGCCCCAAGAGTTGTACGAGATGGAGAGGTGCAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGTCTCAAGTTTCACGATCTCGTTTACAAATTCACCAAGTACGAGCCAAGGACCCGGGCCAGCTACCACAAATACCTCAATTTCAACGGTGAAACATTTTCGAAGAAAAGAGTATAAACTACATTTTTCTCTATTATTATTTATTTTTTCTTTTAATTTGCTATGTTTATTATTTTTTCTCTTTTAATTTGCTATTTCTACTTTCTCATTATAGTTAAACAACACTGTAGACTATTTTCTATTTTAAAATTGAAATTTATCGAACAATTTGTCTCATTTTAAAGATCATCATTCTAAAAACACAATTGACTGGACTTTTTTACACTATCATAAAGTAGCATAAAATGGAGTATTCTAGGTGGTTTCGTATCTAAACCAATTTCCAAGGGCAAATTTACCAAAGACCGTCTCAACTTTAATGCGTTTTTATACTAGTATAAATCAAAGCCATTCTATTTACCAAAATGACCATTTGACACAGTGGTAGATGTTCTCATCTCCCTTGATTAATTTAGGTTCAAATTCTTCTTCACTTAATTCAATTTTATATCTATTAAATTAATTAATTTCAAAAAGAAAATGGTATATGTCAAGAACGTAATAGACATGAAATTAAAAGTTTAGAGGTCTAGAGTTTAACTTTAATTTCTCACCCTCACAGTTGTTGGATTGGGAAAATAAATAAATAAATTTAGAGGTCTATGTGACATTTTTAAAGTTTAGTGATGATATAAGACACAAAATTAAAAGTTTATAGACTAAATTTGTAATTTTCTTTTTTACATATTTGAATATTTTTCCAATACATCTTTTTTTTAGAATATTTTTATGAAGCATTAAACTAAGCCCTAAAACAAAATTTTTATTTGACATTGTCAATCTTTCATGTCAAATAGGAGTTCAAATAACCCAAATTACTCCACTCAAATCGTCTCAATTGGGTTAGTTTTTATTTTTTGGTTTGGTATCAATTGATCTTTTTAAACTAGAAATTTGGGTTGGTTCTCGTTTTTAAACTTTTGGTCTGGTGGACCTGACCCACCTTTAAAGAATGGTGGATGTTGCAATATATCATTAAATAAAAAACTCATATTTTAAATGTAATTTATACATGAATTATATCATCAAATAACCTATTTTGATGTTGGCTTCTTTCAATAGTTTATCATTTTTTTTGTAAAAGAAATATTTTAAAGTTTTAGTCAAACATTAAAATGGAAAACAATTATTCTAATCTTAAAAATAGATTCAACATGAAGTAAATAACTAAAAATTCAATTGTCATATTTTTATGTTTTCCTTCCAATGTGTCTTTTACCTTGGGCGTTCCAAATTCAAAACCAAGGGCAGTAGAGCAACACTCTATGGGCAAGTACACAAAAAGACCAAAAAGCCATTCCAGCATTACCCACACAATACGCAAGAAGACAAGGACACATTAGGAAAAAAATTAAATGAAGGTTAAATTATAGAAAATACCCTACACCTTAAACTTTGCTCTTTATTTATACTCCTATACTTTCAAAAGTTTTAATATTATCCTCGAGTAGAAATTCTTAAAAAAAATAAATTCTTGAAAATTGGCACCTAAATGGTGTTGTAGTGACCTATATTTTAGTATTAGTGGGACATTATTCCAAGTCCCCATTAAAGTCTAAATTTCTAAAGGATTTCTAATACGAAGGTAGTTTTAAAACATTTATAAAAAGTTAAGGGGTAGTATTGCAACTGAGGGTTTTTTTTTTTTTTTTTTTGTTAAAGTACCATTTTGGTTCCTATATTTGAATTTTGTTCAATTTACTTTTCAAATGTACTTTCTATAAATCCTAAATTTAGTTATTCAAGTTAATTTTCATCGAAATTGATTAAATAATCATAATAGAATTCATGCAAAAAAAAAAATGCGATATATGAATATATTTTTAACATCTATAATAAAAATGTTTATTAAAAATAAAAAGTAATGACAAATTCACAATAATCTACTACTATGAATTGAATTCAAGATTGATTGAAAACACTAAAATTAAACATTTAAAAGTAAGATACAAATCAAACAAAATATAAAAATCAAAATGATATTTTTAAATTTTTTAATAATTTAGTCTTTAAAAAATCTTAAATTACATATTTACCCCTCCAAGGAAGCTTAAGTCCGACGGAAAAAGAGTTTCCATTAAATAAAAACGCCGAAAAAGCGATCACTCAATTCTCACATGCAGATGCAGTTGCAACTTCCCCGTCTCCAATGGCTACCAAAACCGCTTCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAAGGCCTCCGACAAAACAATGCCGCCGCCTGGAAGCCAATCGAAGGCGGGGACCACGGATCATCTCGTTAAGGCTTTTCTGATGCAGATCGTAAAGCCGTCGAGTCACGATCTCCAGAGACGGAGGAATTTCCAGCCTAAACCTTCCCGATTCTGCAATGTCGTCGCTTCGGATCATCGATTGGCTGTTTCTTGA

mRNA sequence

ATGCATATTCGATATGTCCCTAAGTCTCTTATGATCATCGATCCTGATTCCTATACTCCACAGGAAATTGCAATTGGTCCATGCCATCACTGGCCCCAAGAGTTGTACGAGATGGAGAGGTGCAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGTCTCAAGTTTCACGATCTCGTTTACAAATTCACCAAAAATTTGGGTTGGTTCTCGTTTTTAAACTTTTGGTCTGGTGGACCTGACCCACCTTTAAAGAATGGAAGCTTAAGTCCGACGGAAAAAGAGTTTCCATTAAATAAAAACGCCGAAAAAGCGATCACTCAATTCTCACATGCAGATGCAGTTGCAACTTCCCCGTCTCCAATGGCTACCAAAACCGCTTCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAAGGCCTCCGACAAAACAATGCCGCCGCCTGGAAGCCAATCGAAGGCGGGGACCACGGATCATCTCGTTAAGGCTTTTCTGATGCAGATCGTAAAGCCGTCGAGTCACGATCTCCAGAGACGGAGGAATTTCCAGCCTAAACCTTCCCGATTCTGCAATGTCGTCGCTTCGGATCATCGATTGGCTGTTTCTTGA

Coding sequence (CDS)

ATGCATATTCGATATGTCCCTAAGTCTCTTATGATCATCGATCCTGATTCCTATACTCCACAGGAAATTGCAATTGGTCCATGCCATCACTGGCCCCAAGAGTTGTACGAGATGGAGAGGTGCAAGATTGCTGCAGCCAAAAGAGCTCAAAAACAGCTCCAAAGTCTCAAGTTTCACGATCTCGTTTACAAATTCACCAAAAATTTGGGTTGGTTCTCGTTTTTAAACTTTTGGTCTGGTGGACCTGACCCACCTTTAAAGAATGGAAGCTTAAGTCCGACGGAAAAAGAGTTTCCATTAAATAAAAACGCCGAAAAAGCGATCACTCAATTCTCACATGCAGATGCAGTTGCAACTTCCCCGTCTCCAATGGCTACCAAAACCGCTTCCTCTTCCCGCCTCTGTCTCTGTGCTCCGACCACCCATCCCGGCTCTTTCCGCTGCAGCCTCCACCGCCGTCCCTCGAAGGCCTCCGACAAAACAATGCCGCCGCCTGGAAGCCAATCGAAGGCGGGGACCACGGATCATCTCGTTAAGGCTTTTCTGATGCAGATCGTAAAGCCGTCGAGTCACGATCTCCAGAGACGGAGGAATTTCCAGCCTAAACCTTCCCGATTCTGCAATGTCGTCGCTTCGGATCATCGATTGGCTGTTTCTTGA

Protein sequence

MHIRYVPKSLMIIDPDSYTPQEIAIGPCHHWPQELYEMERCKIAAAKRAQKQLQSLKFHDLVYKFTKNLGWFSFLNFWSGGPDPPLKNGSLSPTEKEFPLNKNAEKAITQFSHADAVATSPSPMATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTMPPPGSQSKAGTTDHLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVASDHRLAVS
Homology
BLAST of Clc09G03340 vs. NCBI nr
Match: KAA0058731.1 (uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa])

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-31
Identity = 83/104 (79.81%), Postives = 87/104 (83.65%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT---MPPP-GSQSKAG--TTDH- 183
           MA KTASSSRLCLCAPTTHPGSFRCSLHRRPS +S KT   +PPP GSQSKA   TTDH 
Sbjct: 1   MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY 60

Query: 184 LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
            +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D RLAVS
Sbjct: 61  FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

BLAST of Clc09G03340 vs. NCBI nr
Match: KAG7014157.1 (hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-31
Identity = 80/103 (77.67%), Postives = 82/103 (79.61%), Query Frame = 0

Query: 121 PSPMATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTMPPPGSQSKAGTTDH---- 180
           PSPMA KTASSSRLCLCAPT+HPGSFRCSLHRRP KASDKT    GSQSKA T       
Sbjct: 101 PSPMANKTASSSRLCLCAPTSHPGSFRCSLHRRPRKASDKTTLSRGSQSKAATATSTATG 160

Query: 181 LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVVASDHRLAVS 220
           L K FLMQ +KPSSHDL RRRNFQPKPSRFCN  ASDHRL VS
Sbjct: 161 LFKVFLMQAIKPSSHDL-RRRNFQPKPSRFCN-AASDHRLEVS 201

BLAST of Clc09G03340 vs. NCBI nr
Match: XP_008461151.1 (PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo])

HSP 1 Score: 145.6 bits (366), Expect = 5.1e-31
Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT---MPPP-GSQSKAG--TTDH- 183
           M  KTASSSRLCLCAPTTHPGSFRCSLHRRPS +S KT   +PPP GSQSKA   TTDH 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY 60

Query: 184 LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
            +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D RLAVS
Sbjct: 61  FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

BLAST of Clc09G03340 vs. NCBI nr
Match: KGN45240.1 (hypothetical protein Csa_016736 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 3.3e-30
Identity = 82/105 (78.10%), Postives = 88/105 (83.81%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT--MPPP---GSQSKAG--TTD- 183
           M  KTASSSRLCLCAPTTHPGSFRCSLHRR S +S KT  +PPP   GSQSKA   TTD 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60

Query: 184 HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
           HL+KAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV ASD RLAVS
Sbjct: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

BLAST of Clc09G03340 vs. NCBI nr
Match: KAG6593379.1 (hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-30
Identity = 76/99 (76.77%), Postives = 83/99 (83.84%), Query Frame = 0

Query: 124 MATKTA-SSSRLCLCAPTTHPGSFRCSLHRRPSKASDK--TMPPPGSQSKAGTTDHLVKA 183
           MA KTA SS RLCLCAPTTHPGSFRCSLHRR  KAS+K   +PPPG+QSKA +   LVKA
Sbjct: 1   MANKTAPSSRRLCLCAPTTHPGSFRCSLHRRMRKASNKMPPLPPPGNQSKAVSATDLVKA 60

Query: 184 FLMQIVKPSSHDLQRRRNFQPKPSRFCNVVASDHRLAVS 220
           FLMQ++KPSS DLQRRRNFQPKPSRFCN  ASD+ LAVS
Sbjct: 61  FLMQVIKPSSQDLQRRRNFQPKPSRFCN-AASDYGLAVS 98

BLAST of Clc09G03340 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.9e-10
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 6   VPKSLMIIDPDSYTPQEIAIGPCHHWPQELYEMERCKIAAAKRAQKQLQSLKFHDLVYK 65
           VPK+LM   PDSYTP  ++IGP H    EL+EMER K+  A++ + Q  S +FHDLV K
Sbjct: 48  VPKALMCSHPDSYTPHRVSIGPYHCLKPELHEMERYKLMIARKIRNQYNSFRFHDLVEK 106

BLAST of Clc09G03340 vs. ExPASy TrEMBL
Match: A0A5A7UZ19 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002010 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.5e-32
Identity = 83/104 (79.81%), Postives = 87/104 (83.65%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT---MPPP-GSQSKAG--TTDH- 183
           MA KTASSSRLCLCAPTTHPGSFRCSLHRRPS +S KT   +PPP GSQSKA   TTDH 
Sbjct: 1   MANKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY 60

Query: 184 LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
            +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D RLAVS
Sbjct: 61  FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

BLAST of Clc09G03340 vs. ExPASy TrEMBL
Match: A0A1S3CEH6 (uncharacterized protein LOC103499822 OS=Cucumis melo OX=3656 GN=LOC103499822 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.5e-31
Identity = 82/104 (78.85%), Postives = 86/104 (82.69%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT---MPPP-GSQSKAG--TTDH- 183
           M  KTASSSRLCLCAPTTHPGSFRCSLHRRPS +S KT   +PPP GSQSKA   TTDH 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRPSNSSHKTPQPLPPPHGSQSKAATTTTDHY 60

Query: 184 LVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
            +KAFLMQIVKPSSH LQRR NFQPKPSRFCN+V A D RLAVS
Sbjct: 61  FLKAFLMQIVKPSSHGLQRRGNFQPKPSRFCNIVSAPDPRLAVS 104

BLAST of Clc09G03340 vs. ExPASy TrEMBL
Match: A0A0A0K698 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432210 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 82/105 (78.10%), Postives = 88/105 (83.81%), Query Frame = 0

Query: 124 MATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKT--MPPP---GSQSKAG--TTD- 183
           M  KTASSSRLCLCAPTTHPGSFRCSLHRR S +S KT  +PPP   GSQSKA   TTD 
Sbjct: 1   MPNKTASSSRLCLCAPTTHPGSFRCSLHRRLSNSSHKTPPLPPPSPRGSQSKAAATTTDH 60

Query: 184 HLVKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNVV-ASDHRLAVS 220
           HL+KAFLMQIVKPSSHDLQRR +F+PKPSRFC+VV ASD RLAVS
Sbjct: 61  HLLKAFLMQIVKPSSHDLQRRGSFEPKPSRFCSVVSASDPRLAVS 105

BLAST of Clc09G03340 vs. ExPASy TrEMBL
Match: A0A6J1DD51 (uncharacterized protein LOC111019381 OS=Momordica charantia OX=3673 GN=LOC111019381 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.3e-27
Identity = 68/90 (75.56%), Postives = 71/90 (78.89%), Query Frame = 0

Query: 124 MATKT----ASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTMPPPGSQSKAGTTDHLVK 183
           MATKT    AS+SRLCLCAPTTHPGSFRCSLHRRP KASDK+     S         LVK
Sbjct: 1   MATKTAPSSASASRLCLCAPTTHPGSFRCSLHRRPRKASDKSKAAAASGGVDWNKTDLVK 60

Query: 184 AFLMQIVKPSSHDLQRRRNFQPKPSRFCNV 210
           AFLMQI+KPSSHDLQRRRNFQPKPSRFCNV
Sbjct: 61  AFLMQIIKPSSHDLQRRRNFQPKPSRFCNV 90

BLAST of Clc09G03340 vs. ExPASy TrEMBL
Match: A0A1S3CDL4 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103499824 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-22
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0

Query: 6   VPKSLMIIDPDSYTPQEIAIGPCHHWPQELYEMERCKIAAAKRAQKQLQSLKFHDLVYKF 65
           VPKSLM+IDPDSYTPQE+AIGP HHW QELYEMER KIAAAKRAQKQLQSLKFHDLV K 
Sbjct: 55  VPKSLMVIDPDSYTPQEVAIGPYHHWRQELYEMERYKIAAAKRAQKQLQSLKFHDLVEKL 114

Query: 66  TKN 69
           TK+
Sbjct: 115 TKH 117

BLAST of Clc09G03340 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 67.0 bits (162), Expect = 2.1e-11
Identity = 47/149 (31.54%), Postives = 68/149 (45.64%), Query Frame = 0

Query: 86  LKNGSLSPTEKEFPLNKNAEKAITQFSHADAVATSPSPMATKTASSSRLCLCAPTTHPGS 145
           L + S+SPT K   ++KN        SH   +              SR C+C+PTTHPGS
Sbjct: 93  LDSRSISPTNKSISVSKNQPP-----SHNHKI--------------SRRCMCSPTTHPGS 152

Query: 146 FRCSLHRRPSKASDKTMPPPGSQSKAGTTDHL---------------------VKAFLMQ 205
           FRCSLH+  +        P G  + + TT+ L                     V+  L  
Sbjct: 153 FRCSLHKNVAN-------PHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWVRRALTT 212

Query: 206 IVKPSSHDLQRRRNFQPKPSRFCNVVASD 214
           +++PSSH L+RR  +QP+PSR   +  +D
Sbjct: 213 LIRPSSHHLKRRAAYQPRPSRLSIMAKAD 215

BLAST of Clc09G03340 vs. TAIR 10
Match: AT3G02645.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-11
Identity = 31/59 (52.54%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 6   VPKSLMIIDPDSYTPQEIAIGPCHHWPQELYEMERCKIAAAKRAQKQLQSLKFHDLVYK 65
           VPK+LM   PDSYTP  ++IGP H    EL+EMER K+  A++ + Q  S +FHDLV K
Sbjct: 48  VPKALMCSHPDSYTPHRVSIGPYHCLKPELHEMERYKLMIARKIRNQYNSFRFHDLVEK 106

BLAST of Clc09G03340 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 37/115 (32.17%), Postives = 57/115 (49.57%), Query Frame = 0

Query: 116 AVATSPSPMATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTMPPPGSQSKAGTTD 175
           AV+++      K   S R C+C+PTTHPGSFRCSLH+  +        P G  + + TT+
Sbjct: 107 AVSSNKPSNHHKIPDSRRRCMCSPTTHPGSFRCSLHKNVAN-------PHGQGTASYTTN 166

Query: 176 HL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV 210
            L                     V+  L  +++PSSH L+RR  ++P+ SR  ++
Sbjct: 167 GLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASM 214

BLAST of Clc09G03340 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 58.2 bits (139), Expect = 9.9e-09
Identity = 37/115 (32.17%), Postives = 57/115 (49.57%), Query Frame = 0

Query: 116 AVATSPSPMATKTASSSRLCLCAPTTHPGSFRCSLHRRPSKASDKTMPPPGSQSKAGTTD 175
           AV+++      K   S R C+C+PTTHPGSFRCSLH+  +        P G  + + TT+
Sbjct: 107 AVSSNKPSNHHKIPDSRRRCMCSPTTHPGSFRCSLHKNVAN-------PHGQGTASYTTN 166

Query: 176 HL---------------------VKAFLMQIVKPSSHDLQRRRNFQPKPSRFCNV 210
            L                     V+  L  +++PSSH L+RR  ++P+ SR  ++
Sbjct: 167 GLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHQLKRRSAYEPRRSRLASM 214

BLAST of Clc09G03340 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07
Identity = 42/139 (30.22%), Postives = 57/139 (41.01%), Query Frame = 0

Query: 99  PLNKNAEKAITQFSHADAVATSPSPMATKTAS---SSRLCLCAPTTHPGSFRCSLHRRPS 158
           P NKN    +  +S      + P P     +S   + R CLC+PTTHPGSFRCS HRR  
Sbjct: 36  PCNKNLNLRLKFYS----PGSIPKPSVVTVSSNHQTKRKCLCSPTTHPGSFRCSFHRRLE 95

Query: 159 KASDKTMPPP--------------------------GSQSKAGT--TDHLVKAFLMQIVK 207
               KT+                              S +K G+   +   ++    + K
Sbjct: 96  HEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRRSLAANLAK 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0058731.11.3e-3179.81uncharacterized protein E6C27_scaffold339G002010 [Cucumis melo var. makuwa][more]
KAG7014157.11.7e-3177.67hypothetical protein SDJN02_24331, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_008461151.15.1e-3178.85PREDICTED: uncharacterized protein LOC103499822 [Cucumis melo][more]
KGN45240.13.3e-3078.10hypothetical protein Csa_016736 [Cucumis sativus][more]
KAG6593379.17.3e-3076.77hypothetical protein SDJN03_12855, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
P0C8973.9e-1052.54Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ... [more]
Match NameE-valueIdentityDescription
A0A5A7UZ196.5e-3279.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3CEH62.5e-3178.85uncharacterized protein LOC103499822 OS=Cucumis melo OX=3656 GN=LOC103499822 PE=... [more]
A0A0A0K6981.6e-3078.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432210 PE=4 SV=1[more]
A0A6J1DD516.3e-2775.56uncharacterized protein LOC111019381 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A1S3CDL42.7e-2287.30putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103499824 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G11090.12.1e-1131.54serine-rich protein-related [more]
AT3G02645.12.8e-1152.54Plant protein of unknown function (DUF247) [more]
AT5G25280.19.9e-0932.17serine-rich protein-related [more]
AT5G25280.29.9e-0932.17serine-rich protein-related [more]
AT5G20370.14.2e-0730.22serine-rich protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 4..64
e-value: 2.9E-10
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..172
NoneNo IPR availablePANTHERPTHR33132:SF63SUBFAMILY NOT NAMEDcoord: 126..212
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 126..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G03340.2Clc09G03340.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane