Clc09G03290 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G03290
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	RNA helicase
Location	ClcChr09: 2551037 .. 2553795 (-)
RNA-Seq Expression	Clc09G03290
Synteny	Clc09G03290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAATAGCCCACCGCCTGCGGAGGGACGGTGTGACAGTCAGAACTTCCGAAGACGCCCAAGATTGCGTTGCTTGTTTCCTCCGACTAGGGCGGCCGCCGGTTTTCTGAAGGGAGACCCTTCCGCCAATCAAACTCGCTCTGTGTCTCAATACTTTTCTTTGGTTTTAATTATCTGTGTCACTTTTTCGGTTTGGTTCTTGTTCGAATCCCGACAACGAAGAACTAGAGGACTGATCTGCTCCCCGTGTAAAAGGTTCGAGTAAGTTTTAGCTTATTTTGCCTTTTGATAATCTTTGTGGGTTCTTATTATTGACTTATTTGTCAACGAAGTTATTCGTTCTATGTCTTTTTCTCTAAATCCGTCTCCGGGAGGTTCGAACTGAAATGGGGTTGTATTTCAGAGACCCTAATCGGAATCTATCATTGAAGAATCTAATTCGAGGGGGCTTTTCTTGTTCGTAATTGGTTTCTGCATTTGGGGTTTGTTGTTTGGTTAATTGTAGTTGATATCTGCGTGTAACATGAAATGTAATGGTTTCTAGGGTTAGTTGCTAAGTGTCTAGGGATTGGATTTCTGATGGTCTTTTGATAATTTTTGGGCGCAGAGAGAGGATTCTATGATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGATGATTACGTTGAATATGTTCCTGTGGCGAAGCGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGGAAGGGCAAGGCTTCTGCCCTTGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACAGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCTATAAGGAGGATGCCGAAAAAGGCCTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGGATTGTGCAACCTACTCCCATTCAGGTGCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACGGGTTCAGGAAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACATATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGGTATCCAGAACTAAGGCCTTTACTTTGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAACCTTGACAATTGCAGGTAAAAGAATTATTCCAGTTTGTATTACATCTTTGGGTTAAACTCTATGAACAGATAGTTGAAATAGACTAACATCTGGTGGCAATTAGCAAAGTAGTTTATTGAAATACTTATATATTTTGTAGAATCGTTATTTCTATGGCAAATAAATACATGCTTGCTTGCCTCCTCTATTTAAACTCTTTCCCTTCAAGTATCTTGTAGATAAATTGCTGTTAAACTTCGATTTGTTTCCCATGACTTCTTAGTTGATACCAATTGATAGTTGTCTTGATCTGACCTTCAGTAGTTCTTCCCCTCTTTGCGCTGGGATTAATGATACCACTTCTGCTATTGTTACAGGTATCTTACTTTAGATGAGGCTGATAGACTAGTGGATCTGGGATTTGAAGACGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTATTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCTAGAAGTGCCCTGGTAAAGCCTGTAACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGACGTCATTCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACACCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCATGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTAGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATTTCTTCCTTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTATGTCCATAGGATTGGACGAACAGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAACAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTATTGGCCGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGTGGTGTCAAAGGTTGCGCTTATTGTGGTGGACTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCCGGCGGATATAGAGGAGAAATTTGA

mRNA sequence

ATGCGAATAGCCCACCGCCTGCGGAGGGACGGTGTGACAGTCAGAACTTCCGAAGACGCCCAAGATTGCGTTGCTTGTTTCCTCCGACTAGGGCGGCCGCCGAGAGAGGATTCTATGATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGATGATTACGTTGAATATGTTCCTGTGGCGAAGCGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGGAAGGGCAAGGCTTCTGCCCTTGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACAGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCTATAAGGAGGATGCCGAAAAAGGCCTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGGATTGTGCAACCTACTCCCATTCAGGTGCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACGGGTTCAGGAAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACATATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGGTATCCAGAACTAAGGCCTTTACTTTGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGACTAGTGGATCTGGGATTTGAAGACGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTATTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCTAGAAGTGCCCTGGTAAAGCCTGTAACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGACGTCATTCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACACCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCATGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTAGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATTTCTTCCTTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTATGTCCATAGGATTGGACGAACAGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAACAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTATTGGCCGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGTGGTGTCAAAGGTTGCGCTTATTGTGGTGGACTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCCGGCGGATATAGAGGAGAAATTTGA

Coding sequence (CDS)

ATGCGAATAGCCCACCGCCTGCGGAGGGACGGTGTGACAGTCAGAACTTCCGAAGACGCCCAAGATTGCGTTGCTTGTTTCCTCCGACTAGGGCGGCCGCCGAGAGAGGATTCTATGATGGATGTACAAATGAAGGACGAAAAGAGCTTGGAAGAAGAAGATGATTACGTTGAATATGTTCCTGTGGCGAAGCGTAGAGCAATGGAAGCTCAAAAGATTCTTATGCGGAAGGGCAAGGCTTCTGCCCTTGAGGAAGAGTTGGAGAAATCAAGACTTGCTGAAGCCAAGCCTAGTCTCCTTGTAAAAGCATCTCAGATGAAGCGTGACCAACCAGAAGTTAGTCCAACAGAGCAGATTGTTCAGCAAGAGAAGGAGATGATCGAGCACTTATCTGATCGTAAAACTCTAATGTCAGTTCGTGAACTAGCAAAAGGAATTACATACACAGAGCCATTATTAACTGGATGGAAGCCACCATTGCCTATAAGGAGGATGCCGAAAAAGGCCTGTGATTTGATTCGCAAACAGTGGCACATAATAGTTGATGGTGATGAGATTCCACCGCCTATTAAAAACTTCAAGGACATGAGACTCCCTGAACCAGTTTTGAAGAAATTGAAAGAAAAAGGGATTGTGCAACCTACTCCCATTCAGGTGCAAGGTCTACCTGTGATTTTATCTGGCAGAGATATGATTGGGATTGCATTTACGGGTTCAGGAAAGACCCTAGTTTTTGTTCTTCCTTTGATAATGATTGCATTACAAGAAGAGGTCATGATGCCCATTGTTTCAGGAGAAGGACCTTTTGGTTTGATTATTTGTCCTTCAAGGGAGCTTGCTAGACAGACATATGAAGTGGTGGAACAGTTTTTAATTCCCATGAAGGAGGCTGGGTATCCAGAACTAAGGCCTTTACTTTGTATAGGTGGAGTGGATATGAGATCACAGATAGAGGTTGTGAAGAAGGGTGTTCATATTGTTGTTGCAACCCCTGGGAGGTTGAAGGATATGTTGGCAAAAAAGAAAATGAACCTTGACAATTGCAGGTATCTTACTTTAGATGAGGCTGATAGACTAGTGGATCTGGGATTTGAAGACGATATTAGGGAAGTTTTTGATCATTTTAAGGCTCAACGCCAAACTCTATTATTTTCTGCCACAATGCCTACCAAAATTCAAAATTTTGCTAGAAGTGCCCTGGTAAAGCCTGTAACTGTTAACGTGGGAAGAGCTGGAGCTGCAAACCTTGACGTCATTCAGGAGGTCGAGTATGTGAAACAAGAGGCAAAAATTGTTTACTTGCTCGAGTGTCTGCAGAAAACACCACCTCCAGTGTTGATATTCTGTGAGAATAAAGCCGATGTCGATGACATTCATGAGTATCTACTCTTGAAAGGTGTTGAAGCAGTAGCAATTCATGGAGGAAAAGATCAGGAAGAGAGAGAGTATGCTATTTCTTCCTTTAAGGCGAGCAAGAAAGATGTATTGGTTGCTACTGATGTTGCATCAAAGGGTTTAGATTTTCCAGACATTCAACATGTTATCAACTACGATATGCCAGCTGAAATTGAGAACTATGTCCATAGGATTGGACGAACAGGACGATGTGGTAAGACAGGAATTGCAACAACATTCATAAACAAGAATCAAAGCGAAACAACTCTCCTTGATTTAAAGCACCTTCTGCAAGAAGCAAAACAGAGGATTCCACCAGTATTGGCCGAGCTGAATGACCCTATGGAGGACGTGGAAGCGATCACCAATGCAAGTGGTGTCAAAGGTTGCGCTTATTGTGGTGGACTTGGTCACCGTATCCGTGACTGCCCCAAGTTAGAGCACCAGAAAAGCATGGCAATTGCAAGTTCAAGAAGAGATTATTTTGGATCCGGCGGATATAGAGGAGAAATTTGA

Protein sequence

MRIAHRLRRDGVTVRTSEDAQDCVACFLRLGRPPREDSMMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI

Homology

[Close]

BLAST of Clc09G03290 vs. NCBI nr
Match: KAG6593383.1 (DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1172.5 bits (3032), Expect = 0.0e+00
Identity = 596/604 (98.68%), Postives = 601/604 (99.50%), Query Frame = 0


Query: 33  PPREDSMMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRL 92
           P R DSMMDV MKDEKS+EEE+DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRL
Sbjct: 67  PSRGDSMMDVVMKDEKSMEEEEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRL 126

Query: 93  AEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPL 152
           AEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPL
Sbjct: 127 AEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPL 186

Query: 153 LTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIV 212
           LTGWKPPLPIRRMP+KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIV
Sbjct: 187 LTGWKPPLPIRRMPRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIV 246

Query: 213 QPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLI 272
           QPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLI
Sbjct: 247 QPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLI 306

Query: 273 ICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPG 332
           ICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIE+VKKGVHIVVATPG
Sbjct: 307 ICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEIVKKGVHIVVATPG 366

Query: 333 RLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKI 392
           RLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKI
Sbjct: 367 RLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKI 426

Query: 393 QNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENK 452
           QNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENK
Sbjct: 427 QNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENK 486

Query: 453 ADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQ 512
           ADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQ
Sbjct: 487 ADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQ 546

Query: 513 HVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPV 572
           HVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPV
Sbjct: 547 HVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPV 606

Query: 573 LAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGY 632
           LAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGY
Sbjct: 607 LAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGY 666

Query: 633 RGEI 637
           RGEI
Sbjct: 667 RGEI 670

[Close]

BLAST of Clc09G03290 vs. NCBI nr
Match: XP_008461142.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >XP_008461143.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >KAA0058735.1 DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo var. makuwa])

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0


Query: 40  MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 99
           MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 100 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 159
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 160 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 219
           LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 220 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 279
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 280 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 339
           ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 340 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 399
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 400 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 459
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 460 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 519
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 520 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 579
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 580 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Clc09G03290 vs. NCBI nr
Match: XP_038885065.1 (DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida] >XP_038885066.1 DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida] >XP_038885067.1 DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida])

HSP 1 Score: 1171.0 bits (3028), Expect = 0.0e+00
Identity = 596/598 (99.67%), Postives = 597/598 (99.83%), Query Frame = 0


Query: 39  MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 98
           MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILM KGKASALEEELEKSRLAEAKPS
Sbjct: 1   MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMHKGKASALEEELEKSRLAEAKPS 60

Query: 99  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 158
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 159 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 218
           PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 219 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 278
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 279 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 338
           LARQTYEVVEQFL+PMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLLPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 300

Query: 339 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 398
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 399 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 458
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 459 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 518
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 519 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 578
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 579 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Clc09G03290 vs. NCBI nr
Match: XP_004135864.1 (DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus] >KAE8646435.1 hypothetical protein Csa_015670 [Cucumis sativus])

HSP 1 Score: 1170.2 bits (3026), Expect = 0.0e+00
Identity = 596/597 (99.83%), Postives = 597/597 (100.00%), Query Frame = 0


Query: 40  MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 99
           MDVQMKDEKSLEEED+YVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 100 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 159
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 160 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 219
           LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 220 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 279
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 280 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 339
           ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 340 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 399
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 400 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 459
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 460 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 519
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 520 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 579
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 580 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Clc09G03290 vs. NCBI nr
Match: XP_023004285.1 (DEAD-box ATP-dependent RNA helicase 35 [Cucurbita maxima] >XP_023004286.1 DEAD-box ATP-dependent RNA helicase 35 [Cucurbita maxima] >XP_023514207.1 DEAD-box ATP-dependent RNA helicase 35 [Cucurbita pepo subsp. pepo] >KAG7025731.1 DEAD-box ATP-dependent RNA helicase 35 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 597/598 (99.83%), Query Frame = 0


Query: 39  MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 98
           MMDV MKDEKS+EEE+DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MMDVVMKDEKSMEEEEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 99  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 158
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 159 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 218
           PLPIRRMP+KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 219 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 278
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 279 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 338
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIE+VKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEIVKKGVHIVVATPGRLKDML 300

Query: 339 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 398
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 399 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 458
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 459 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 518
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 519 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 578
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 579 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot
Match: Q9LU46 (DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 PE=2 SV=1)

HSP 1 Score: 1036.6 bits (2679), Expect = 1.2e-301
Identity = 521/590 (88.31%), Postives = 555/590 (94.07%), Query Frame = 0


Query: 47  EKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 106
           E  +EE D Y+EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 107 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMP 166
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+M 
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 167 KKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 226
            K  DLIRKQWHIIV+GD+IPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 227 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 286
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 287 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 346
           VEQF+ P+ EAGYP LR LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 347 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 406
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 407 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 466
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 467 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 526
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 527 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 586
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 587 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot
Match: Q0E3X4 (DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0150100 PE=2 SV=2)

HSP 1 Score: 974.5 bits (2518), Expect = 5.6e-283
Identity = 487/610 (79.84%), Postives = 544/610 (89.18%), Query Frame = 0


Query: 51  EEEDDYVEYVPVAKRRAMEAQKI-LMRKGK-----ASALEEELE---------------- 110
           ++ED+Y EY+PVAKRRAMEA ++  +R  K     +SA E   +                
Sbjct: 18  DDEDNYEEYIPVAKRRAMEADRLRRLRLSKPAPPSSSAAEAASDLPPPPPPPPNQPSAGG 77

Query: 111 --KSRLAEAKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGI 170
                 A AKPSLLVKA+Q+KR  PEV+ TEQ++ QEKEMIEHLSDRKTLMSVRELAKGI
Sbjct: 78  GGGGLEASAKPSLLVKATQLKRAAPEVTHTEQLIMQEKEMIEHLSDRKTLMSVRELAKGI 137

Query: 171 TYTEPLLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKL 230
           TY++PL TGWKPPL +RRMP+   D +R++WHI+VDGD++PPP ++F+D+RLPEP+L+KL
Sbjct: 138 TYSDPLKTGWKPPLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKL 197

Query: 231 KEKGIVQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGE 290
           +EKGIVQPTPIQVQGLPV+LSGRDMIGIAFTGSGKTLVFVLPLIM+ALQEE+MMPIV GE
Sbjct: 198 REKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGE 257

Query: 291 GPFGLIICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHI 350
           GPFG+IICPSRELA+QTY+V+EQFL+P+KEAGYPE+RPLLCIGGVDMR+Q++VVKKGVHI
Sbjct: 258 GPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGVHI 317

Query: 351 VVATPGRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 410
           VVATPGRLKD+LAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA
Sbjct: 318 VVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSA 377

Query: 411 TMPTKIQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVL 470
           TMP KIQNFA+SALVKPV VNVGRAGAANLDVIQEVEYVK++A+I+YLLECLQKTPPPVL
Sbjct: 378 TMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARIIYLLECLQKTPPPVL 437

Query: 471 IFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGL 530
           +FCENKADVD IHEYLLLKGVEAVAIHGGKDQEERE AI  FK  KKDVLVATDVASKGL
Sbjct: 438 VFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKGL 497

Query: 531 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAK 590
           DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLL+EAK
Sbjct: 498 DFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQTETTLLDLKHLLKEAK 557

Query: 591 QRIPPVLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDY 637
           QRIPPVLAELNDP+ED E +   SGVKGCAYCGGLGHR+ DCPKLEHQKSMAIA SRRDY
Sbjct: 558 QRIPPVLAELNDPLEDEETMAKESGVKGCAYCGGLGHRVTDCPKLEHQKSMAIAGSRRDY 617

[Close]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot
Match: Q5Z6G5 (DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0697200 PE=3 SV=1)

HSP 1 Score: 897.5 bits (2318), Expect = 8.7e-260
Identity = 452/599 (75.46%), Postives = 520/599 (86.81%), Query Frame = 0


Query: 52  EEDDYVEYVPVAKRRAMEAQKILMRKGK-------ASALEEELEKSRLAEA------KPS 111
           +E+DY EYVPVAKRRAMEA++ L R  K       A A      +S  + A      K S
Sbjct: 22  DEEDYEEYVPVAKRRAMEAER-LRRATKPPTTNAVAVAAPPPPPRSTSSPAVGEVAVKTS 81

Query: 112 LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 171
           LLVKA+++KR+ PEV+P E+++QQE+EMIEHLSDRK LM V E+AKGI+Y+EP+ TGW+P
Sbjct: 82  LLVKATKLKREAPEVTPAERLLQQEREMIEHLSDRKALMPVGEIAKGISYSEPITTGWRP 141

Query: 172 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 231
           PL +RRMP+   D +R+ WHI+VDGD++PPP ++F D+RLPEP+L+ L+ KGI +PTPIQ
Sbjct: 142 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 201

Query: 232 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 291
           VQGLPV LSGRDMIGIAFTGSGKTLVFVLPLIM ALQEE++MPIV GEGPFGLI+CPSRE
Sbjct: 202 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRE 261

Query: 292 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 351
           LARQT+EV+E FL P+ EAGYPE+RPLLCIGGVDMR+Q+EVVKKGVHIVVATPGRLKD+L
Sbjct: 262 LARQTHEVIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVATPGRLKDLL 321

Query: 352 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 411
           +KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNFA+S
Sbjct: 322 SKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKS 381

Query: 412 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 471
           ALVKP+ VNVGRAGAANLDVIQEVEYVK+EA+I+YLLECLQKTPPPVL+FCE+KADVD I
Sbjct: 382 ALVKPIIVNVGRAGAANLDVIQEVEYVKEEARIIYLLECLQKTPPPVLVFCEHKADVDYI 441

Query: 472 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 531
            E+LLLKGVEAVAIHGGKD EER+ A  SFKAS+KDVLVATDVASKGLD PDIQHVINYD
Sbjct: 442 QEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYD 501

Query: 532 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 591
           MPAEIENYVHRIGRTGR GKTG+ATTFINKNQ+ETTLLDLK LL E+KQR+PP+LA+L+D
Sbjct: 502 MPAEIENYVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADLDD 561

Query: 592 PMEDVE-AITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           P ED + AI   SGVKGCA+CGGLGHRI  CPK + Q S+ +A +R DYFG GGYRGEI
Sbjct: 562 PQEDDKVAIAQQSGVKGCAFCGGLGHRIEACPKQQLQNSVTLARARSDYFGGGGYRGEI 619

[Close]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot
Match: Q9SZB4 (Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 GN=RH43 PE=3 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 4.9e-255
Identity = 445/587 (75.81%), Postives = 488/587 (83.13%), Query Frame = 0


Query: 50  LEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 109
           +E +D YVEYVPV +R A   +K++   GK                              
Sbjct: 1   MEVDDGYVEYVPVEERLAQMKRKVVEEPGKG----------------------------- 60

Query: 110 QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKA 169
                           M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL +R+M  K 
Sbjct: 61  ----------------MMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQ 120

Query: 170 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 229
            DLIRKQWHI V+G++IPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQGLPV+LSGR
Sbjct: 121 MDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGR 180

Query: 230 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 289
           DMIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+QTY+VVEQ
Sbjct: 181 DMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQ 240

Query: 290 FLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 349
           F+  + E GYP LR LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR
Sbjct: 241 FVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACR 300

Query: 350 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 409
            LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALVKPVTVNVG
Sbjct: 301 LLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVG 360

Query: 410 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 469
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 361 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEA 420

Query: 470 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 529
           VAIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP EIENYVHR
Sbjct: 421 VAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHR 480

Query: 530 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 589
           IGRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME+ E I NA
Sbjct: 481 IGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANA 540

Query: 590 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           SGVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 541 SGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot
Match: Q91VN6 (Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX=10090 GN=Ddx41 PE=1 SV=2)

HSP 1 Score: 694.9 bits (1792), Expect = 8.5e-199
Identity = 355/596 (59.56%), Postives = 457/596 (76.68%), Query Frame = 0


Query: 45  KDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRL-----------A 104
           + E   E+++DYV YVP+ +RR +  QK+L R+ K +  EE+ +                
Sbjct: 22  RSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATEEEQQDSGSEPRGDEDDIPLGP 81

Query: 105 EAKPSLLVKASQMKR--DQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEP 164
           ++  SLL +   +K   +  + S  E+ +++E++++E +++ + LMSV+E+AKGITY +P
Sbjct: 82  QSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDP 141

Query: 165 LLTGWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGI 224
           + T W PP  +  M ++  + +RK++HI+V+GD IPPPIK+FK+M+ P  +L+ LK+KGI
Sbjct: 142 IKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGI 201

Query: 225 VQPTPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGL 284
           + PTPIQ+QG+P ILSGRDMIGIAFTGSGKTLVF LP+IM  L++E  +P    EGP+GL
Sbjct: 202 LHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGL 261

Query: 285 IICPSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATP 344
           IICPSRELARQT+ ++E +   ++E   P LR  LCIGG+ ++ Q+E ++ GVH++VATP
Sbjct: 262 IICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATP 321

Query: 345 GRLKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTK 404
           GRL D+L KK ++LD CRYL LDEADR++D+GFE DIR +F +FK QRQTLLFSATMP K
Sbjct: 322 GRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKK 381

Query: 405 IQNFARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCEN 464
           IQNFA+SALVKPVT+NVGRAGAA+LDVIQEVEYVK+EAK+VYLLECLQKTPPPVLIF E 
Sbjct: 382 IQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEK 441

Query: 465 KADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDI 524
           KADVD IHEYLLLKGVEAVAIHGGKDQEER  AI +F+  KKDVLVATDVASKGLDFP I
Sbjct: 442 KADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAI 501

Query: 525 QHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPP 584
           QHVINYDMP EIENYVHRIGRTGR G TGIATTFINK   E+ L+DLK LL EAKQ++PP
Sbjct: 502 QHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPP 561

Query: 585 VLAELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIAS-SRRDY 627
           VL  L+      E++ +  G +GCA+CGGLGHRI DCPKLE  ++  +++  R+DY
Sbjct: 562 VLQVLHC---GDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDY 614

[Close]

BLAST of Clc09G03290 vs. ExPASy TrEMBL
Match: A0A0A0K6A2 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G432260 PE=3 SV=1)

HSP 1 Score: 1174.1 bits (3036), Expect = 0.0e+00
Identity = 599/602 (99.50%), Postives = 600/602 (99.67%), Query Frame = 0


Query: 35  REDSMMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAE 94
           RE S MDVQMKDEKSLEEED+YVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAE
Sbjct: 116 REGSTMDVQMKDEKSLEEEDEYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAE 175

Query: 95  AKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLT 154
           AKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLT
Sbjct: 176 AKPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLT 235

Query: 155 GWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQP 214
           GWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQP
Sbjct: 236 GWKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQP 295

Query: 215 TPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIIC 274
           TPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIIC
Sbjct: 296 TPIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIIC 355

Query: 275 PSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRL 334
           PSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRL
Sbjct: 356 PSRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRL 415

Query: 335 KDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQN 394
           KDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQN
Sbjct: 416 KDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQN 475

Query: 395 FARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKAD 454
           FARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKAD
Sbjct: 476 FARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKAD 535

Query: 455 VDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHV 514
           VDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHV
Sbjct: 536 VDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHV 595

Query: 515 INYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 574
           INYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA
Sbjct: 596 INYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 655

Query: 575 ELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRG 634
           ELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRG
Sbjct: 656 ELNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRG 715

Query: 635 EI 637
           EI
Sbjct: 716 EI 717

[Close]

BLAST of Clc09G03290 vs. ExPASy TrEMBL
Match: A0A1S3CDK5 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103499818 PE=3 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0


Query: 40  MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 99
           MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 100 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 159
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 160 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 219
           LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 220 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 279
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 280 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 339
           ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 340 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 399
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 400 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 459
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 460 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 519
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 520 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 579
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 580 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Clc09G03290 vs. ExPASy TrEMBL
Match: A0A5A7UYT9 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002050 PE=3 SV=1)

HSP 1 Score: 1171.8 bits (3030), Expect = 0.0e+00
Identity = 597/597 (100.00%), Postives = 597/597 (100.00%), Query Frame = 0


Query: 40  MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 99
           MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL
Sbjct: 1   MDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSL 60

Query: 100 LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 159
           LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP
Sbjct: 61  LVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPP 120

Query: 160 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 219
           LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV
Sbjct: 121 LPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQV 180

Query: 220 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 279
           QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL
Sbjct: 181 QGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSREL 240

Query: 280 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 339
           ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA
Sbjct: 241 ARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLA 300

Query: 340 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 399
           KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA
Sbjct: 301 KKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSA 360

Query: 400 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 459
           LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH
Sbjct: 361 LVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIH 420

Query: 460 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 519
           EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM
Sbjct: 421 EYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDM 480

Query: 520 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 579
           PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP
Sbjct: 481 PAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDP 540

Query: 580 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 MEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 597

[Close]

BLAST of Clc09G03290 vs. ExPASy TrEMBL
Match: A0A6J1KU58 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111497657 PE=3 SV=1)

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 597/598 (99.83%), Query Frame = 0


Query: 39  MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 98
           MMDV MKDEKS+EEE+DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MMDVVMKDEKSMEEEEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 99  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 158
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 159 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 218
           PLPIRRMP+KACDLIRKQWHIIVDGD+IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPRKACDLIRKQWHIIVDGDDIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 219 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 278
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 279 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 338
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIE+VKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEIVKKGVHIVVATPGRLKDML 300

Query: 339 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 398
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 399 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 458
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 459 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 518
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 519 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 578
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 579 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Clc09G03290 vs. ExPASy TrEMBL
Match: A0A6J1H714 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111461026 PE=3 SV=1)

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 592/598 (99.00%), Postives = 596/598 (99.67%), Query Frame = 0


Query: 39  MMDVQMKDEKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 98
           MMDV MKDEKS+EEE+DYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS
Sbjct: 1   MMDVVMKDEKSMEEEEDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPS 60

Query: 99  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 158
           LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP
Sbjct: 61  LLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKP 120

Query: 159 PLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 218
           PLPIRRMP+KACDLIRKQWHIIVDGD IPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ
Sbjct: 121 PLPIRRMPRKACDLIRKQWHIIVDGDNIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQ 180

Query: 219 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 278
           VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE
Sbjct: 181 VQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRE 240

Query: 279 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDML 338
           LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIE+VKKGVHIVVATPGRLKDML
Sbjct: 241 LARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEIVKKGVHIVVATPGRLKDML 300

Query: 339 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 398
           AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS
Sbjct: 301 AKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARS 360

Query: 399 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 458
           ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI
Sbjct: 361 ALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDI 420

Query: 459 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 518
           HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD
Sbjct: 421 HEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYD 480

Query: 519 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 578
           MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND
Sbjct: 481 MPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELND 540

Query: 579 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI
Sbjct: 541 PMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 598

[Close]

BLAST of Clc09G03290 vs. TAIR 10
Match: AT5G51280.1 (DEAD-box protein abstrakt, putative )

HSP 1 Score: 1036.6 bits (2679), Expect = 8.5e-303
Identity = 521/590 (88.31%), Postives = 555/590 (94.07%), Query Frame = 0


Query: 47  EKSLEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQM 106
           E  +EE D Y+EYV VA+RRA+ AQKIL RKGKAS LEEE +K +LAEAKPSLLV+A+Q+
Sbjct: 2   ESIMEEADSYIEYVSVAERRAIAAQKILQRKGKASELEEEADKEKLAEAKPSLLVQATQL 61

Query: 107 KRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMP 166
           KRD PEVS TEQI+ QEKEM+EHLSD+KTLMSVRELAKGITYTEPLLTGWKPPL IR+M 
Sbjct: 62  KRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVRELAKGITYTEPLLTGWKPPLHIRKMS 121

Query: 167 KKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVIL 226
            K  DLIRKQWHIIV+GD+IPPPIKNFKDM+ P PVL  LKEKGIVQPTPIQVQGLPVIL
Sbjct: 122 SKQRDLIRKQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVIL 181

Query: 227 SGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEV 286
           +GRDMIGIAFTGSGKTLVFVLP+IMIALQEE+MMPI +GEGP GLI+CPSRELARQTYEV
Sbjct: 182 AGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEV 241

Query: 287 VEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLD 346
           VEQF+ P+ EAGYP LR LLCIGG+DMRSQ+EVVK+GVHIVVATPGRLKDMLAKKKM+LD
Sbjct: 242 VEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLD 301

Query: 347 NCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTV 406
            CRYLTLDEADRLVDLGFEDDIREVFDHFK+QRQTLLFSATMPTKIQ FARSALVKPVTV
Sbjct: 302 ACRYLTLDEADRLVDLGFEDDIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTV 361

Query: 407 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKG 466
           NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKG
Sbjct: 362 NVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADVDDIHEYLLLKG 421

Query: 467 VEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 526
           VEAVAIHGGKDQE+REYAISSFKA KKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY
Sbjct: 422 VEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENY 481

Query: 527 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAI 586
           VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPME+ E I
Sbjct: 482 VHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEEAETI 541

Query: 587 TNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
            NASGVKGCAYCGGLGHRIRDCPKLEHQKS+AI++SR+DYFGSGGYRGEI
Sbjct: 542 ANASGVKGCAYCGGLGHRIRDCPKLEHQKSVAISNSRKDYFGSGGYRGEI 591

[Close]

BLAST of Clc09G03290 vs. TAIR 10
Match: AT4G33370.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 881.7 bits (2277), Expect = 3.5e-256
Identity = 445/587 (75.81%), Postives = 488/587 (83.13%), Query Frame = 0


Query: 50  LEEEDDYVEYVPVAKRRAMEAQKILMRKGKASALEEELEKSRLAEAKPSLLVKASQMKRD 109
           +E +D YVEYVPV +R A   +K++   GK                              
Sbjct: 1   MEVDDGYVEYVPVEERLAQMKRKVVEEPGKG----------------------------- 60

Query: 110 QPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTGWKPPLPIRRMPKKA 169
                           M+EHLSD+K LMSV ELA+GITYTEPL T WKPPL +R+M  K 
Sbjct: 61  ----------------MMEHLSDKKKLMSVGELARGITYTEPLSTWWKPPLHVRKMSTKQ 120

Query: 170 CDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGR 229
            DLIRKQWHI V+G++IPPPIKNF DM+ P P+L+ LK+KGI+ PTPIQVQGLPV+LSGR
Sbjct: 121 MDLIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGR 180

Query: 230 DMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQ 289
           DMIGIAFTGSGKTLVFVLP+I++ALQEE+MMPI +GEGP  L+ICPSRELA+QTY+VVEQ
Sbjct: 181 DMIGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQ 240

Query: 290 FLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCR 349
           F+  + E GYP LR LLCIGGVDMRSQ++VVKKGVHIVVATPGRLKD+LAKKKM+LD CR
Sbjct: 241 FVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACR 300

Query: 350 YLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVG 409
            LTLDEADRLVDLGFEDDIR VFDHFK+QRQTLLFSATMP KIQ FA SALVKPVTVNVG
Sbjct: 301 LLTLDEADRLVDLGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVG 360

Query: 410 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEA 469
           RAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADVDDIHEYLLLKGVEA
Sbjct: 361 RAGAANLDVIQEVEYVKQEAKIVYLLECLQKTTPPVLIFCENKADVDDIHEYLLLKGVEA 420

Query: 470 VAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHR 529
           VAIHGGKDQE+R+YAIS FKA KKDVLVATDVASKGLDFPDIQHVINYDMP EIENYVHR
Sbjct: 421 VAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHR 480

Query: 530 IGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 589
           IGRTGRCGKTGIATTFINKNQSE TLLDLKHLLQEAKQRIPPVLAELN PME+ E I NA
Sbjct: 481 IGRTGRCGKTGIATTFINKNQSEITLLDLKHLLQEAKQRIPPVLAELNGPMEETETIANA 540

Query: 590 SGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGEI 637
           SGVKGCAYCGGLGHRI  CPK EHQKS+AI+SSR+D+FGS GYRGE+
Sbjct: 541 SGVKGCAYCGGLGHRILQCPKFEHQKSVAISSSRKDHFGSDGYRGEV 542

[Close]

BLAST of Clc09G03290 vs. TAIR 10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 302.4 bits (773), Expect = 8.8e-82
Identity = 162/406 (39.90%), Postives = 246/406 (60.59%), Query Frame = 0


Query: 174 RKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 233
           RK   I V+G +IP P+K+F+D+  P+ VL+++K+ G  +PTPIQ QG P+ + GRD+IG
Sbjct: 82  RKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIG 141

Query: 234 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 293
           IA TGSGKTL ++LP I+    + +   +  G+GP  L++ P+RELA Q  +   +F   
Sbjct: 142 IAETGSGKTLSYLLPAIVHVNAQPM---LAHGDGPIVLVLAPTRELAVQIQQEASKF--- 201

Query: 294 MKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 353
                  +++     GGV    Q+  ++KGV IV+ATPGRL DM+     NL    YL L
Sbjct: 202 ---GSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVL 261

Query: 354 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAG- 413
           DEADR++D+GF+  IR++  H +  RQTL +SAT P +++  ++  L  P  V +G +  
Sbjct: 262 DEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDL 321

Query: 414 AANLDVIQEVEYVKQEAKIVYLLECLQ--KTPPPVLIFCENKADVDDIHEYLLLKGVEAV 473
            AN  + Q V+ + +  K   L++ L+       +L+F + K   D I   L + G  A+
Sbjct: 322 KANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPAL 381

Query: 474 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 533
           +IHG K Q ER++ +S F++ K  ++ ATDVA++GLD  D+++VINYD P  +E+YVHRI
Sbjct: 382 SIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 441

Query: 534 GRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 577
           GRTGR G  G A TF     +     +L ++LQEA Q++ P LA +
Sbjct: 442 GRTGRAGAKGTAYTFFTVANARFA-KELTNILQEAGQKVSPELASM 477

[Close]

BLAST of Clc09G03290 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 295.0 bits (754), Expect = 1.4e-79
Identity = 174/425 (40.94%), Postives = 245/425 (57.65%), Query Frame = 0


Query: 174 RKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQGLPVILSGRDMIG 233
           R++  I V G ++  P+K F+D      ++  +K++   +PT IQ Q LP++LSGRD+IG
Sbjct: 211 RQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIG 270

Query: 234 IAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICPSRELARQTYEVVEQFLIP 293
           IA TGSGKT  FVLP+I+  + +  +      EGP G+I  P+RELA Q +   ++F   
Sbjct: 271 IAKTGSGKTAAFVLPMIVHIMDQPELQ---RDEGPIGVICAPTRELAHQIFLEAKKF--- 330

Query: 294 MKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAKKKMNLDNCRYLTL 353
            K  G   LR     GG+    Q + +K G  IVVATPGRL DML  K + +    YL L
Sbjct: 331 SKAYG---LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVL 390

Query: 354 DEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSALVKPVTVNVGRAGA 413
           DEADR+ DLGFE  +R +    +  RQTLLFSATMP K++  AR  L  P+ V VG  G 
Sbjct: 391 DEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM 450

Query: 414 ANLDVIQEVEYVKQEA-KIVYLLECL--QKTPPPVLIFCENKADVDDIHEYLLLKGVEAV 473
           AN D+ Q V  +  +A K+ +LLE L        VL+F   KA VD+I   L L   +  
Sbjct: 451 ANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVA 510

Query: 474 AIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 533
           A+HG KDQ  R   +  FK+    VL+ATDVA++GLD   ++ V+NYD+  +++ +VHRI
Sbjct: 511 ALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRI 570

Query: 534 GRTGRCG-KTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAELNDPMEDVEAITNA 593
           GRTGR G + G+A T + + ++     +L + L  A Q +PP L +L   M+D    +  
Sbjct: 571 GRTGRAGDRDGVAYTLVTQREARFA-GELVNSLVAAGQNVPPELTDL--AMKDGRFKSKR 623

Query: 594 SGVKG 595
            G KG
Sbjct: 631 DGRKG 623

[Close]

BLAST of Clc09G03290 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 293.1 bits (749), Expect = 5.3e-79
Identity = 169/419 (40.33%), Postives = 247/419 (58.95%), Query Frame = 0


Query: 162 IRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPTPIQVQG 221
           ++ M ++   + R +  I V+G ++P P+K F+D   P+ +L+ + + G  +PTPIQ QG
Sbjct: 136 VQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQG 195

Query: 222 LPVILSGRDMIGIAFTGSGKTLVFVLP-LIMIALQEEVMMPIVSGEGPFGLIICPSRELA 281
            P+ L GRD+IGIA TGSGKTL ++LP L+ ++ Q      +   +GP  LI+ P+RELA
Sbjct: 196 WPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPR----LGQDDGPIVLILAPTRELA 255

Query: 282 RQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLKDMLAK 341
            Q  E   +F +    +G   +R     GG     QI  +++GV IV+ATPGRL DML  
Sbjct: 256 VQIQEESRKFGL---RSG---VRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEC 315

Query: 342 KKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNFARSAL 401
           +  NL    YL LDEADR++D+GFE  IR++    +  RQTLL+SAT P +++  AR  L
Sbjct: 316 QHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQFL 375

Query: 402 VKPVTVNVGRAG-AANLDVIQEVEYVKQEAKIVYLLECLQK--TPPPVLIFCENKADVDD 461
             P    +G     AN  + Q +E V    K   LL  L++      +LIF E K   D 
Sbjct: 376 RDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETKRGCDQ 435

Query: 462 IHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVINY 521
           +   L + G  A+AIHG K Q ER+  ++ FK+ +  ++ ATDVA++GLD  DI+ V+NY
Sbjct: 436 VTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNY 495

Query: 522 DMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 577
           D P  +E+Y+HRIGRTGR G  G+A TF   + ++    +L  +LQEA Q +PP L+ L
Sbjct: 496 DFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA-RELVKILQEAGQVVPPTLSAL 543

The following BLAST results are available for this feature:

BLAST of Clc09G03290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593383.1	0.0e+00	98.68	DEAD-box ATP-dependent RNA helicase 35, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_008461142.1	0.0e+00	100.00	PREDICTED: DEAD-box ATP-dependent RNA helicase 35 [Cucumis melo] >XP_008461143.1...	[more]
XP_038885065.1	0.0e+00	99.67	DEAD-box ATP-dependent RNA helicase 35 [Benincasa hispida] >XP_038885066.1 DEAD-...	[more]
XP_004135864.1	0.0e+00	99.83	DEAD-box ATP-dependent RNA helicase 35 [Cucumis sativus] >KAE8646435.1 hypotheti...	[more]
XP_023004285.1	0.0e+00	99.00	DEAD-box ATP-dependent RNA helicase 35 [Cucurbita maxima] >XP_023004286.1 DEAD-b...	[more]

BLAST of Clc09G03290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU46	1.2e-301	88.31	DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana OX=3702 GN=RH35 P...	[more]
Q0E3X4	5.6e-283	79.84	DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q5Z6G5	8.7e-260	75.46	DEAD-box ATP-dependent RNA helicase 35B OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q9SZB4	4.9e-255	75.81	Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q91VN6	8.5e-199	59.56	Probable ATP-dependent RNA helicase DDX41 OS=Mus musculus OX=10090 GN=Ddx41 PE=1...	[more]

BLAST of Clc09G03290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6A2	0.0e+00	99.50	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_7G432260 PE=3 SV=1	[more]
A0A1S3CDK5	0.0e+00	100.00	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103499818 PE=3 SV=1	[more]
A0A5A7UYT9	0.0e+00	100.00	RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002050 ...	[more]
A0A6J1KU58	0.0e+00	99.00	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111497657 PE=3 SV=1	[more]
A0A6J1H714	0.0e+00	99.00	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111461026 PE=3 SV=1	[more]

BLAST of Clc09G03290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G51280.1	8.5e-303	88.31	DEAD-box protein abstrakt, putative	[more]
AT4G33370.1	3.5e-256	75.81	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	8.8e-82	39.90	DEA(D/H)-box RNA helicase family protein	[more]
AT2G47330.1	1.4e-79	40.94	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	5.3e-79	40.33	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 548..568
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 57..616
None	No IPR available	PANTHER	PTHR47958:SF79	BNAA06G38640D PROTEIN	coord: 57..616
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 418..546 e-value: 1.06544E-55 score: 183.092
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 210..421 e-value: 6.6E-57 score: 205.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 222..406 score: 30.308105
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 456..537 e-value: 5.5E-33 score: 125.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 430..537 e-value: 4.3E-30 score: 104.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 417..577 score: 23.096851
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 594..610 e-value: 0.0053 score: 25.3
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 594..610 e-value: 2.2E-4 score: 21.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 595..610 score: 9.108787
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 416..578 e-value: 2.1E-55 score: 188.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 160..410 e-value: 7.6E-80 score: 269.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 267..552
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 215..394 e-value: 1.2E-48 score: 165.2
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 191..219 score: 10.800855
IPR044113	DDX41, DEAD-box helicase domain	CDD	cd17951	DEADc_DDX41	coord: 202..407 e-value: 5.43936E-138 score: 399.406
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 594..615

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G03290.2	Clc09G03290.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding