Clc09G02890 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGTCTACAGAGATCTGTGGTATCCTTCCGCCGGCAGGGATCTTCCGGTGTAGTTTGGGACGACAAATTCATATCGGAGCTTAACAAGGCGGGGCAAGACAACGGAGAATCCAGCGCGGTTGCGGAGGTGAGGACCGGAAGAAATATTCCCCCGATCAAGACGATTGATCCCAGCGCAGGACGAGGATTCCGGAGTAGAGACACGGTGTCCCCAGCGGTGGAACCGCCGTCGCCTAGAGTTTCTGCTTGTGGACTCTGCAGCGCTTTTGGGAAATCGAGCGGTCAGAAACATAGAGCGCCGTTGGCCGGCAGGCGCCGATCACGGTAGGTTTTGAAAATTATATTTGTGGGAAAATTACCTTTTTATCCATAAGTATTCAGCAATAAATTAGGGCCAAGCGTATTTATTGTTGAAAATTTAAGGACTACCAAAGTAATTTGATTTTCCGAAAAAGACGGATGTAAATATGTTTGATCTTTTTTGGGGGGATGATCTTTAAATTTTTATTTTTAATTTAGGGTGAAAGATGTTTGTTTCTGTTTTAATTAGAGGTCTAGACTTTGTGGTTTTGTCAAATTTTGCTTTCTGTTTGGGTGCTTCTAATTGGAACAAGAAACTTTGATGTTTAGTCCTTAATTTCACAATACAATCATTCAAATGTAAAAATGTGTTGGGTTTTCTTGATTTTTTTAATTGACATTTTTTTGGGTAGTTTAATCAATTAGATTTAATTCAGTTTAGTTTACATCCAAATTTTAATTATATGGATGCAAAAGTATTGTTATAATTGCACCTTAAGAAAAAATTACCATTACTTTTGGCATAATTTCATATTTATTCAAGTTTAGGAAAAACTATTTAAGCTCCTAATAACCGCTAGATAGAAATTTGAAGTACTTGATCCCTTCTTTCAGGAGTGTTTGGAATACTTTTATATTGTGGCTCTACAATGTGATTTACTTTAATATGGCTAAAACATTCTTTTTTTTAACTTTCCTCTCAAACATCCAACCTTGGCATGTATACATGAGCTTTATTAAATATTTATGGTGTTTAAAAGTTTTCAATTTAGATTTGAGCTCACCTATACAAACAATAGTGTTTGATGACAACCATATACTAATGATGAAGTAATAAACTTGGAAGTATTCCAAGTATCGAATCTCACAAGACTAAATGTAAATTAAGTTCTTTTAAGGCCATGCAATCAATGTAGCCAAATGTAACCAATTGTGATTATATATTGATTAGATTAGATAATGATTAAAAATAGTAAATAAAGGGAGATAAGTAAGAATATCGTTTAGTTTCAACCTTAAGACAATAAGCCTTGGGCAATGCAGTTGCATCATAACTTGCTATGAAAAAACTATTCCTATTCAGTCTTTGTGTCAAGTTCTTTTAGGAGCCTAAATAGCTAATCCTATATTTCTATAGTTAGCTGAATCTTAGATTAATTTCATGCAATTTCTCCTATGGTGCACCTTATTTTCAAGGTTGCATAACAATCTTTTTTTTGGGCTTTTTGTCCCGTATTTTTTTTTAAAATCATTTTTCATCCTAACCTTCTAACAATTTTTAACTATAAATTCAACAAAAGAAATGTGCAAGTAGGAGGTATGATGAATTAACACTTTAAACTCCACAATCTTTAGGGTATCAACATAACGAAATCTCTTAACAAATTTAGTTCATGATAAAAGAAGAACGATATTCATTAAATCAGAAATCATGATTACAAGTTTATCCATTCAAAGAATGGAAAGATGAAAAGAAACTAAAAGAAACTAAAAGAAATTAAATGAGTATTAGAAAATATAGAAAAATAAACTTATTGGAACAATCTCTCACTCTTTCAAGCTTCCCATGCTGGATTCTCATTTCTCAAGGATGAATCCTCCCTCTCTATACTTGTTCTTACGGGATAGGGGGATCCTACCTCTAAGTTCTTTAGAGGAACTTTTGTTCTCGAAGAGTTCTAA ATGGCTGGTCTACAGAGATCTGTGGTATCCTTCCGCCGGCAGGGATCTTCCGGTGTAGTTTGGGACGACAAATTCATATCGGAGCTTAACAAGGCGGGGCAAGACAACGGAGAATCCAGCGCGGTTGCGGAGGTGAGGACCGGAAGAAATATTCCCCCGATCAAGACGATTGATCCCAGCGCAGGACGAGGATTCCGGAGTAGAGACACGGTGTCCCCAGCGGTGGAACCGCCGTCGCCTAGAGTTTCTGCTTGTGGACTCTGCAGCGCTTTTGGGAAATCGAGCGGTCAGAAACATAGAGCGCCGTTGGCCGGCAGGCGCCGATCACGGAGTGTTTGGAATACTTTTATATTGTGGCTCTACAATGTGATTTACTTTAATATGGCTAAAACATTCTTTTTTTTAACTTTCCTCTCAAACATCCAACCTTGGCATGGGGATCCTACCTCTAAGTTCTTTAGAGGAACTTTTGTTCTCGAAGAGTTCTAA ATGGCTGGTCTACAGAGATCTGTGGTATCCTTCCGCCGGCAGGGATCTTCCGGTGTAGTTTGGGACGACAAATTCATATCGGAGCTTAACAAGGCGGGGCAAGACAACGGAGAATCCAGCGCGGTTGCGGAGGTGAGGACCGGAAGAAATATTCCCCCGATCAAGACGATTGATCCCAGCGCAGGACGAGGATTCCGGAGTAGAGACACGGTGTCCCCAGCGGTGGAACCGCCGTCGCCTAGAGTTTCTGCTTGTGGACTCTGCAGCGCTTTTGGGAAATCGAGCGGTCAGAAACATAGAGCGCCGTTGGCCGGCAGGCGCCGATCACGGAGTGTTTGGAATACTTTTATATTGTGGCTCTACAATGTGATTTACTTTAATATGGCTAAAACATTCTTTTTTTTAACTTTCCTCTCAAACATCCAACCTTGGCATGGGGATCCTACCTCTAAGTTCTTTAGAGGAACTTTTGTTCTCGAAGAGTTCTAA MAGLQRSVVSFRRQGSSGVVWDDKFISELNKAGQDNGESSAVAEVRTGRNIPPIKTIDPSAGRGFRSRDTVSPAVEPPSPRVSACGLCSAFGKSSGQKHRAPLAGRRRSRSVWNTFILWLYNVIYFNMAKTFFFLTFLSNIQPWHGDPTSKFFRGTFVLEEF Homology
BLAST of Clc09G02890 vs. NCBI nr
Match: XP_031745110.1 (MAPK kinase substrate protein At1g80180 [Cucumis sativus] >KAE8646448.1 hypothetical protein Csa_015766 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 1.8e-41 Identity = 94/116 (81.03%), Postives = 102/116 (87.93%), Query Frame = 0
BLAST of Clc09G02890 vs. NCBI nr
Match: XP_008461094.1 (PREDICTED: uncharacterized protein At1g15400-like [Cucumis melo] >KAA0058767.1 uncharacterized protein E6C27_scaffold339G002400 [Cucumis melo var. makuwa] >TYK10561.1 uncharacterized protein E5676_scaffold459G002140 [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 1.5e-40 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of Clc09G02890 vs. NCBI nr
Match: XP_022991595.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita maxima]) HSP 1 Score: 168.7 bits (426), Expect = 4.1e-38 Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 0
BLAST of Clc09G02890 vs. NCBI nr
Match: XP_023549291.1 (MAPK kinase substrate protein At1g80180-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 164.5 bits (415), Expect = 7.8e-37 Identity = 89/117 (76.07%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Clc09G02890 vs. NCBI nr
Match: KAG6575586.1 (MAPK kinase substrate protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 162.5 bits (410), Expect = 3.0e-36 Identity = 88/117 (75.21%), Postives = 96/117 (82.05%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy Swiss-Prot
Match: Q9XI29 (Uncharacterized protein At1g15400 OS=Arabidopsis thaliana OX=3702 GN=At1g15400 PE=1 SV=2) HSP 1 Score: 88.2 bits (217), Expect = 9.3e-17 Identity = 60/140 (42.86%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy Swiss-Prot
Match: Q9SSC1 (MAPK kinase substrate protein At1g80180 OS=Arabidopsis thaliana OX=3702 GN=At1g80180 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.7e-16 Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy TrEMBL
Match: A0A5D3CFK2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002140 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 7.4e-41 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy TrEMBL
Match: A0A1S3CEE2 (uncharacterized protein At1g15400-like OS=Cucumis melo OX=3656 GN=LOC103499785 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 7.4e-41 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy TrEMBL
Match: A0A6J1JTD9 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111488162 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 2.0e-38 Identity = 89/116 (76.72%), Postives = 96/116 (82.76%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy TrEMBL
Match: A0A6J1KGD4 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita maxima OX=3661 GN=LOC111494889 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 2.8e-32 Identity = 79/118 (66.95%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of Clc09G02890 vs. ExPASy TrEMBL
Match: A0A6J1HM35 (MAPK kinase substrate protein At1g80180-like OS=Cucurbita moschata OX=3662 GN=LOC111464222 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30 Identity = 78/120 (65.00%), Postives = 92/120 (76.67%), Query Frame = 0
BLAST of Clc09G02890 vs. TAIR 10
Match: AT1G15400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-18 Identity = 60/140 (42.86%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Clc09G02890 vs. TAIR 10
Match: AT1G15400.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 16 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-18 Identity = 60/140 (42.86%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Clc09G02890 vs. TAIR 10
Match: AT1G15400.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 84 Blast hits to 84 proteins in 17 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 6.6e-18 Identity = 60/140 (42.86%), Postives = 77/140 (55.00%), Query Frame = 0
BLAST of Clc09G02890 vs. TAIR 10
Match: AT1G80180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15400.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 86.7 bits (213), Expect = 1.9e-17 Identity = 59/138 (42.75%), Postives = 78/138 (56.52%), Query Frame = 0
BLAST of Clc09G02890 vs. TAIR 10
Match: AT5G20100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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