Clc09G02700 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G02700
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description(6-4)DNA photolyase
LocationClcChr09: 2210720 .. 2213052 (+)
RNA-Seq ExpressionClc09G02700
SyntenyClc09G02700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTTCTTCTGGAAAATCTGAACCTAATCGCCGGAAGGCCGCCGCGCCAAAGTGGTGGTCGCCGATCTTCGGCTGGTCATCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAACAGTCGGTTCAGAATGCCGATCTGGAGCTCGACGGTGGAAGAACCAGATCCAGATTCGCGCCTGGATGCTTCACGGAGGAGAAGGCGAAACTGCTCCGAATGAAAACGCTGGAGAGCTCCACTTTTCACGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTGTCGGACCGAAGCAAGAAATAGATCTACGAAGTTTGGCGCAGTGAGGTATTGTATTGTGTTTTTGGAAATCTGTATCTGTACTGCCTTTTTCTGTAAATCGTCGTAACGAAGAATTTGGGGATGTAAATCCTCCTTTCCTAATAAATTTACCTCTTCTTCTGCCTTTTAGATCATTTAGATTACTGAAAATTCATAACCTACTGCAACTATTTTCCGTCTGATTATTGATTGACAACGATTGATTTGACATTGTTTTCTCATTATAATCAGTTTGTATGCATCATAGAGACTAGTGTAGAGGAATCAAACATCTTGATGTTGACCGCCTAGAAATCTACGCTGGCTGTTGTTAATTTTACAACTAAATAATGATGAGTGCAGTGATTATCTAAATCTTTCTCTATTGATTTCTTCTTGGTGTCAATGGAGTTGAGAAAGATTTTGAGGAGATGTTTGAGTAATCATCTTGAGTGGATAATTTAGATAATTTTTTAATGGATCTTCACTGTTTAAGTTGGACTATCTATAATTGAATCCAGACGAATTTTCTGTACTATGAAGGATTTGTTTTGGATTGAACAAATCATTGTTTAATTGGGGAGAAATTATTACAATGGTTGTTCCTTTGTGGAGAGATAACAAATCTCTATTGGTTTTCATTTAATTTTTACAAAATCTGATGGATTTTGAAAACTTTCATGAATTTCATTGAAATGGGCTTTGTTAAGAAATCGAAAAGTCATTCAGTTCATCGGATTATGATTCAATTGATCTTAAAATAAATCATCATGACGTTTATTAATTATTATTTCTTATTTTGGATAAGGTTATTTAATTTAATCTTATTTTTCGTTGGTTAGGTTTAATTTTTCTCAATGATATTCGGTATTTGGAAATAGTTGAATAAACAAAATATTATCCTTTTTATTTTTAAACAATTTTTCAATAAATTCAAAAATTTACTATTGAAATTGCTATCACTTTAATTTGAATATTTTAAAATTTACTAGAGTTTGTGTTTCAATAAAGCGTAAACTATTTAAACTAAAATACCATTTTATTTTCTTGAAATGAAAGGCTGGAATTTCGGTCTATTATTTTAATCTGCATATTAATTCTCGAAAAATAGAAGAGCTGTATATTGTACATTGTTTAAAAGAATAATTATTTAATGATGTCTATTGGAGGGTGCTGTTTTATCTAATCCAATATTTATTTACTTCAATAACAAAAATAATGATTTTTTAGATTAACTAATTTGGGCAGTTCTTTTCAAATTAGGTCACAATGAGGTGTACTTCAACCATAAATAAATAGATAATCACAAGCAAAGGAATCTCGATGGCTCACGAACACAAGTGATGATAAAATAAGCAAAAATCCTTTCTTTTAGGTATGATTAAATGTTAGGTTAAGAAATGGTTGTCATTATTATAATCATTATTTCGATTAAAAAAAAAAAGTCAGCTTCATAAAAGTGAAAACACCAATTTTAAATCAATCAAGGAAAAAAAAAATAGAGGATGAACTGAAATTGAGAATTTTTTTTAGTTTGAGGATTTTATTTAGAATCAATTGCTCTGTTCATTCACCTTGAATTAAATAGGCAAAGCAGATATTCATATGTATAAATAACAAACAAGAATATTACAACAAATTTGTGCTACATGAAGTATAGGCATTTGGACTTGCGCTACATGAAGTATGCCTTGTGCTACATGAAGTACAGACATTTGGACAAGGTCTAACCATTTGAGAATATTCAAAACCTTTCAGAAGCTCATTAGGTCTAACCATTTGAGAATATTCAAAACCTTTCAGAAGCTCATTTTGGGATTTGCCACAGATCAGCTTCCAGAAGCTCATTTGGGATTTGCCAGATCAGCTCCACATCAATTAATTTGCCACAGATTAGCTTCCAGAAGCTCATTTTGGGATTTGCCAGATCAGGTTCACATCAACTGCCAATTGGTGATAAGTCATTAAATTGA

mRNA sequence

ATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTTCTTCTGGAAAATCTGAACCTAATCGCCGGAAGGCCGCCGCGCCAAAGTGGTGGTCGCCGATCTTCGGCTGGTCATCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAACAGTCGGTTCAGAATGCCGATCTGGAGCTCGACGGTGGAAGAACCAGATCCAGATTCGCGCCTGGATGCTTCACGGAGGAGAAGGCGAAACTGCTCCGAATGAAAACGCTGGAGAGCTCCACTTTTCACGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTATCAGCTTCCAGAAGCTCATTTGGGATTTGCCAGATCAGCTCCACATCAATTAATTTGCCACAGATTAGCTTCCAGAAGCTCATTTTGGGATTTGCCAGATCAGGTTCACATCAACTGCCAATTGGTGATAAGTCATTAAATTGA

Coding sequence (CDS)

ATGGCGACCAATCTTGCCGTTTTCCATCCCGCTCCGATCAGAGCTTCTTCTTCTTCTTCTGGAAAATCTGAACCTAATCGCCGGAAGGCCGCCGCGCCAAAGTGGTGGTCGCCGATCTTCGGCTGGTCATCCGAACCGGACTACGTCGTTTCTTCCGCCGCGGAACAGTCGGTTCAGAATGCCGATCTGGAGCTCGACGGTGGAAGAACCAGATCCAGATTCGCGCCTGGATGCTTCACGGAGGAGAAGGCGAAACTGCTCCGAATGAAAACGCTGGAGAGCTCCACTTTTCACGACATTATGTACCATTCGGCGATCGCGTCGCGTCTCGCTTCCGATTTATCAGCTTCCAGAAGCTCATTTGGGATTTGCCAGATCAGCTCCACATCAATTAATTTGCCACAGATTAGCTTCCAGAAGCTCATTTTGGGATTTGCCAGATCAGGTTCACATCAACTGCCAATTGGTGATAAGTCATTAAATTGA

Protein sequence

MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQNADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSASRSSFGICQISSTSINLPQISFQKLILGFARSGSHQLPIGDKSLN
Homology
[Close]
BLAST of Clc09G02700 vs. NCBI nr
Match: XP_038898524.1 (uncharacterized protein LOC120086132 [Benincasa hispida])

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-50
Identity = 107/115 (93.04%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNLAVFHPAPIRA  SSSGKSEPNRRKA APKWWSPIFGWSSEPDYV+SSAAEQSV N
Sbjct: 1   MATNLAVFHPAPIRA--SSSGKSEPNRRKATAPKWWSPIFGWSSEPDYVLSSAAEQSVLN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           A+ EL+GGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  AEPELEGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. NCBI nr
Match: XP_008461069.1 (PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo] >KAA0058783.1 uncharacterized protein E6C27_scaffold339G002570 [Cucumis melo var. makuwa] >TYK10577.1 uncharacterized protein E5676_scaffold459G002310 [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-49
Identity = 108/117 (92.31%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSS-SSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAE-QSV 60
           MATN AVFHP PIRASSS SSGKS+PNRR AA PKWWSPIFGWSSEPDYVVSSAAE QSV
Sbjct: 1   MATNFAVFHPPPIRASSSASSGKSQPNRRNAAGPKWWSPIFGWSSEPDYVVSSAAEVQSV 60

Query: 61  QNADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           QNAD ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  QNADPELDGGRTGSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 117

[Close]
BLAST of Clc09G02700 vs. NCBI nr
Match: XP_023004861.1 (uncharacterized protein LOC111498038 [Cucurbita maxima])

HSP 1 Score: 201.1 bits (510), Expect = 7.5e-48
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNL VFH APIRA  SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDY+ SSAA+Q VQN
Sbjct: 1   MATNLPVFHVAPIRA--SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           AD ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  ADPELDGGRAKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. NCBI nr
Match: XP_022960101.1 (uncharacterized protein LOC111460952 [Cucurbita moschata] >KAG6593414.1 hypothetical protein SDJN03_12890, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025762.1 hypothetical protein SDJN02_12260, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201.1 bits (510), Expect = 7.5e-48
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNL VFH APIRA  SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDY+ SSAA+Q VQN
Sbjct: 1   MATNLPVFHAAPIRA--SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           AD ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  ADPELDGGRPKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. NCBI nr
Match: XP_023514525.1 (uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-47
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNL VFH APIRA  SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDY+ SSAA+Q VQN
Sbjct: 1   MATNLPVFHVAPIRA--SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQLVQN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           AD ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  ADPELDGGRPKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match: A0A5D3CF29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002310 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.6e-50
Identity = 108/117 (92.31%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSS-SSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAE-QSV 60
           MATN AVFHP PIRASSS SSGKS+PNRR AA PKWWSPIFGWSSEPDYVVSSAAE QSV
Sbjct: 1   MATNFAVFHPPPIRASSSASSGKSQPNRRNAAGPKWWSPIFGWSSEPDYVVSSAAEVQSV 60

Query: 61  QNADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           QNAD ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  QNADPELDGGRTGSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 117

[Close]
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match: A0A1S3CEC0 (uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 8.6e-50
Identity = 108/117 (92.31%), Postives = 109/117 (93.16%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSS-SSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAE-QSV 60
           MATN AVFHP PIRASSS SSGKS+PNRR AA PKWWSPIFGWSSEPDYVVSSAAE QSV
Sbjct: 1   MATNFAVFHPPPIRASSSASSGKSQPNRRNAAGPKWWSPIFGWSSEPDYVVSSAAEVQSV 60

Query: 61  QNADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           QNAD ELDGGRT SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  QNADPELDGGRTGSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 117

[Close]
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match: A0A6J1KTB2 (uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.6e-48
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNL VFH APIRA  SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDY+ SSAA+Q VQN
Sbjct: 1   MATNLPVFHVAPIRA--SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           AD ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  ADPELDGGRAKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match: A0A6J1H6P9 (uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC111460952 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 3.6e-48
Identity = 102/115 (88.70%), Postives = 106/115 (92.17%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQN 60
           MATNL VFH APIRA  SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDY+ SSAA+Q VQN
Sbjct: 1   MATNLPVFHAAPIRA--SSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYIGSSAADQPVQN 60

Query: 61  ADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
           AD ELDGGR +S+F PGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS
Sbjct: 61  ADPELDGGRPKSKFLPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 113

[Close]
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match: A0A0A0K8X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.2e-46
Identity = 104/121 (85.95%), Postives = 106/121 (87.60%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRA-----SSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAE 60
           MATN AVFHPAPI A     SSSSSGK +PNR  AAAPKWWSPIFGWSSEPDYVVSSAAE
Sbjct: 1   MATNFAVFHPAPITASSSSSSSSSSGKYQPNRPNAAAPKWWSPIFGWSSEPDYVVSSAAE 60

Query: 61  -QSVQNADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDL 116
            QS+QNAD EL GGR RSRFAPGCFTEEKAKLLRMKT ESSTFHDIMYHSAIASRLASDL
Sbjct: 61  VQSIQNADPELHGGRIRSRFAPGCFTEEKAKLLRMKTRESSTFHDIMYHSAIASRLASDL 120

[Close]
BLAST of Clc09G02700 vs. TAIR 10
Match: AT1G52720.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.3e-21
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 0 

Query: 12  PIRASSSSSGKSEPNRRKAAAPKWWSPIFGWSSEPDYVVSSAAEQSVQNADLELDGGRTR 71
           P   +SS SG   P++ +  +  WW+P+FG  S+PDY+   ++  +V     ++ G  + 
Sbjct: 11  PTIRASSGSGSLNPDQNRKKSAAWWAPLFGLPSDPDYLNIESSCSTVNPDKTDISG--SG 70

Query: 72  SRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLS 116
            +F  GCFTEEKAK LR KT E+STFHD+MYHSAIASRLASD++
Sbjct: 71  QKFRRGCFTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDIT 112

[Close]
BLAST of Clc09G02700 vs. TAIR 10
Match: AT3G15630.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52720.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.1 bits (240), Expect = 1.4e-20
Identity = 58/119 (48.74%), Postives = 75/119 (63.03%), Query Frame = 0 

Query: 1   MATNLAVFHPAPIRASSSSSGKSEPNRRK-AAAPKWWSPIFGWSSEPDYVVSSAAEQSVQ 60
           MAT ++    + IRASS    +S+P R+K  ++  WW+P+FG SSEPDYV         +
Sbjct: 1   MATIISCSALSSIRASS----ESDPARKKPVSSVSWWAPLFGMSSEPDYV--------NK 60

Query: 61  NADLELDGGRTRSRFAPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSASR 119
             +LE D  +   R    C TEEKAK LR KT E+STFHD+MYHSAIASRLASD+   +
Sbjct: 61  TVNLESDLDKAEKRSLRCCLTEEKAKQLRRKTAEASTFHDVMYHSAIASRLASDVRVKK 107

The following BLAST results are available for this feature:
BLAST of Clc09G02700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038898524.11.2e-5093.04uncharacterized protein LOC120086132 [Benincasa hispida][more]
XP_008461069.11.8e-4992.31PREDICTED: uncharacterized protein LOC103499770 [Cucumis melo] >KAA0058783.1 unc... [more]
XP_023004861.17.5e-4888.70uncharacterized protein LOC111498038 [Cucurbita maxima][more]
XP_022960101.17.5e-4888.70uncharacterized protein LOC111460952 [Cucurbita moschata] >KAG6593414.1 hypothet... [more]
XP_023514525.11.3e-4788.70uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo][more]
BLAST of Clc09G02700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc09G02700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CF298.6e-5092.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CEC08.6e-5092.31uncharacterized protein LOC103499770 OS=Cucumis melo OX=3656 GN=LOC103499770 PE=... [more]
A0A6J1KTB23.6e-4888.70uncharacterized protein LOC111498038 OS=Cucurbita maxima OX=3661 GN=LOC111498038... [more]
A0A6J1H6P93.6e-4888.70uncharacterized protein LOC111460952 OS=Cucurbita moschata OX=3662 GN=LOC1114609... [more]
A0A0A0K8X01.2e-4685.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433380 PE=4 SV=1[more]
BLAST of Clc09G02700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G52720.11.3e-2148.08unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G15630.11.4e-2048.74unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availablePANTHERPTHR34198OS01G0175100 PROTEINcoord: 1..117
NoneNo IPR availablePANTHERPTHR34198:SF12BNAA05G35680D PROTEINcoord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G02700.2Clc09G02700.2mRNA