Clc09G02360 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G02360
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein SYS1 homolog
Location	ClcChr09: 1870534 .. 1874186 (+)
RNA-Seq Expression	Clc09G02360
Synteny	Clc09G02360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAAAAAGGTAAAATGAATTCAAACTTGGCAAATGAATGTCTCAATTGAATTAAGAAATTATAAACAAACAAAACTACAAGGACCAACATTCATTACTAAAAAAATGGGTCTCTTTTTAGTAAAATATGTTTTAAAAATATTACTTCATAAGTAGAAAAAGTGAAGATTTAAATGCAACTTCTTCTATTATACAGACATGAAGGTGGGAAATTAGAACTTCCATTTGTCAGCCATGCAAATTTAGGGCTTCGCATTCTTAAAAGATAAAATAATAATAATAAAAAAAGAAAATTAATTGGGTTTAGTAGTAAGGTTTCAAAATATACTTTTTAATATTTGAGTTTGTTAGAAGGACAATTGTAAAGTGAATATGCGGCCCAATTTAGTAAAATAGCAAAATAATTTTTTTGTAAAGAAAAATATTTGTAACATCTCAAATATTAATTAGATAACTGGTGGCGTTGCACAAAAATGCACCTCCAATCTAATATATAAATATTTTCTTTTCATAATATTATATTTAGAAGGTTAGTAAGTGATTCATTATTACTTTAAATGTTGACGTGACGTTTTAAATTCACGTAATAAGTAAAAAAAAAAAAAATCTTTTTCTCTCCTCTTTCTACTCTATTTTTCTCATTTTTACTAATAAATATTTTTATTTAAAATATTATGTTAACATTTAAACAATAAAAAATACTCAATAAATTTCTAAATATATTCTAAAAAATTCGAAGACTGAAATTACCTTTTGACACCTTAATTTTTTAGTACTAAAGAGTCCTACCACATTTTATTGTACTAAAAAATAAAAATGCAATATATTTTTTTAGTAATAAATGTAAAATGCAATATTAAAATTGACATATTTTTTATTCAAATGCATAACTGAAAAAAATGTGGGGATCGGGGCTGTAATTTTAATTTAAACTAATAATCAATTAATTATATAATATAATTTAATTATGGAAGTAATGAAAGCTTCGATTTTACATTACAACTGTAGCGCATCTCTACGGAAGAAAATTTCTCACAAGAGGCACAGGCACAGGCACGGACACAACCGAAAATATCAGAAGAAAAAGGGGAAAGAACTTCGCCCGGAAACCTGAATTTTGCCGCCGGGGGATTCGATTTGTCTCATCTCGATCTCAAGATTGACTCTTTTATATGTTTCAGACTTGATCTAATTCTTATTTTCTGGTTAGACGGCATTGCGATGCGTTCGTTGTATTAGCGAATTGGGATTTATTCGATTGCTAGGGTTGGATTCTTGAATTGGGATTTGTTTCTCTTTGATTTGAATGTCTCTTTAGATATATATTGTTCTGATTTTAGTATGGGTGGATATAGGATTTGCTTGATTTAGATCCAATGAAACAAGATCGTTAAATTCTCGTGCCAGAGATAGCGGGAGGATTCTTGAAGAGAAATGGGCATCTCTTGAGTTTCATTGTCAATTTGAGAGTGTGTAAGGGGATAGCTTAGAGAAGTCTGTAACTGTTGGGAAATCATTTTTTTTTTTCACACCACGAGTTTGTAATTCGTATTTCAATTATACTGAAAGAAGTTGGATTCTGTTCAGTTTAGGTTAGAGTATACTAATTGAGAAGCTAGAACCGACTGACTTCTGGAGTCATGTTCTATGGTGCAGTTGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGCTTGTATTACCTCACTCTTGGTATATTGCTTGCGACTCTAGTTGGGACTCGCGTTTCTCGGATCAGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGGTAAGAATTTTGTTTTAGCTTTTATCCCCCACCATATTTGGGATTATATTTACAATGCATGGTTATGAATAATTGACAAATCTCAAACATGTTTGTTTGCCCTGTTCTAATTTATTAAAAGTTAGAACTACTTTAGCCGCATGTTAATATACAACATTATACTTGGTTTAGACAAGTTGTATTTGATGCGGCCTTTGTTACATTATTTGGAATTATTTAGATTGATCACCTTCGATGATATTGTTTTGATTGTTAACCATGAAAATGGTTTGTTTTGAATGTAATATTAATGTTTGTGTTTTTATCTCTGCATTATGTAATGAGGCAATTTTTGTTGGATACTATAATCGCACCTATCTCTTTGGTGTCCGAAGTTTTTTTTTCTTAGTAGTTTACAGTATCCCATTGTAGCTCCTTTAGCAAATCATGTGAATTTCAAATGTCCATGTATTTGTACTAGCTACTTGTCTTGCGAACTTTCCCACCACCCCCCCGCCCCTTCCCCGACTTCCCATCTCCTGAATCCCTTTTAGTCTGTTTGGAGAAATATATTGTTTTTCCCTTTTTAGATGTTTCTACTACTATCACAGAAATCCACATCTTTAACATTTTTGCTTTGTTAGGTCTGCTTGCCATAAATTCTATTTCAAATTGCTGATGATGAAACATAAATGTTGAAACTCTATGGAATGAGAAAGCGAGTTGTTTAGAATATGCAGGCAATGGATATTTCAATTTTTGGGCAGATACCGGCAGTTTTCCTCCGTTGGATTTTTTTGTTTAGAATGTGTGGGAGATGGATTGGGGGCTGGGGTGGTTGAAGGATAACAACATAGTTTTGGAGCACTACCGACTAGTAAATATTGTTTCTGTTAAATGTTATCCTCAGAGGCACTCTCTAGTAATGTTTCCTTTTTCTGATGTTTGATACACTTGAAACAGTTTCATAGTAGCCAGTTTTGAATCAAAATTTCTTTTTTCATATTGTTTAGACAAAACTAGTGTCAGCTTCTCTCACCATCACATTTTTCTTGTCATGCAGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATCACGTGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTACTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAGTAAGATTTCTTTCCTCAAGGAATGAACAAATGTCCTTTGACATTCATACTGCTTAAAATTCACAATTTATAGTACCCTTTTTTTTTTGTTGTTGTTGATAGAAATAGTACTAACATGACTGCCAAAACAAAACATGCCAGTACAAATTTTTTTTATTCATGTTAGCCTATTATTTTACTCCTATTAGGAACCAAGGTAGTATAGGCTACCTTTGTCCCGCATTGGTTAGAATGAGATGACCAATGTGGTATTTAAGTGGCTTGAGTCTCCCACCTCAATAGTTGGCTTTTGGAGTGTAGTTCTCCAAGGTGCTTAAGTACCTAACAACTCCATTCTATGCTCGGCTTTGCAGTTGAGTTGACATGTCTGATTTGTACATCAAAGGCTTACCGTTTAATTTTGAGAAAAAAAACTTGTCCTCTTGTTTAAGATTACTGTGAATGTTTAAACACTGACTGAGAATTGGGTGTAGTTGTGTACCATAATGCAAGTCTATTTTTGTGCAGATGTCTGA

mRNA sequence

ATGCAGCGCATCTCTACGGAAGAAAATTTCTCACAAGAGGCACAGGCACAGGCACGGACACAACCGAAAATATCAGAAGAAAAAGGGGAAAGAACTTCGCCCGGAAACCTGAATTTTGCCGCCGGGGGATTCGATTTGTCTCATCTCGATCTCAAGATTGACTCTTTTATATGTTTCAGACTTGATCTAATTCTTATTTTCTGTTGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGCTTGTATTACCTCACTCTTGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATCACGTGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTACTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Coding sequence (CDS)

ATGCAGCGCATCTCTACGGAAGAAAATTTCTCACAAGAGGCACAGGCACAGGCACGGACACAACCGAAAATATCAGAAGAAAAAGGGGAAAGAACTTCGCCCGGAAACCTGAATTTTGCCGCCGGGGGATTCGATTTGTCTCATCTCGATCTCAAGATTGACTCTTTTATATGTTTCAGACTTGATCTAATTCTTATTTTCTGTTGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCCTTCAATGCTTGTATTACCTCACTCTTGCCTTGTTTACTTCTTTGATTATGCTACAATAACTGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTGCTGGAGCAGGTTATCTGGTTTATTTGATTGAAAGAGCAAAGAAGTGCTTAGATTTTGCGGCCACACTCTATATATTCCACCTTTTCATTTGTATCATTTATGGAGGGTGGCCTTCCTCAATCACGTGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTACTGGGTGAATATCTGTGCATCAAACGTGAACTGCGAGAAATTCCTATAACACGATTGCGTTCAAATGTCTGA

Protein sequence

MQRISTEENFSQEAQAQARTQPKISEEKGERTSPGNLNFAAGGFDLSHLDLKIDSFICFRLDLILIFCCMGPLAHCCPNCLPSMLVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV

Homology

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BLAST of Clc09G02360 vs. NCBI nr
Match: XP_038898906.1 (protein SYS1 homolog [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 4.7e-52
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDFAATLYIFHLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           IIYGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. NCBI nr
Match: XP_008462142.1 (PREDICTED: protein SYS1 homolog [Cucumis melo])

HSP 1 Score: 214.9 bits (546), Expect = 6.2e-52
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDFAATLYIFHLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I+YGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. NCBI nr
Match: XP_011659561.1 (protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_016132 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-51
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATI+VSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDFAATLYIFHLFIC
Sbjct: 45  LVYFFDYATISVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           IIYGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. NCBI nr
Match: KAG6575548.1 (Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-51
Identity = 126/186 (67.74%), Postives = 136/186 (73.12%), Query Frame = 0


Query: 26  EEKGERTSPGNLNFAAGGFDLSHLDLKIDSFICFRLDLILIF---------CCMGPLAHC 85
           EEKGE T  G LNFAAG    + + L       F    IL++          C+  L + 
Sbjct: 41  EEKGEETLSGILNFAAGRHCDAFVVLANSDLFGF-WGWILVWDPWLIVAQIVCLQCLYYL 100

Query: 86  CPNCLPSMLV---LPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERA 145
               L + LV   +    LVYFFDYATITVSTATGWCVIASFLLSALAGA YLVYLIERA
Sbjct: 101 TLGILIATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAVYLVYLIERA 160

Query: 146 KKCLDFAATLYIFHLFICIIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPIT 200
           KKCLDFAATLYI HLFICI+YGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPIT
Sbjct: 161 KKCLDFAATLYILHLFICIVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPIT 220

[Close]

BLAST of Clc09G02360 vs. NCBI nr
Match: XP_022143685.1 (protein SYS1 homolog [Momordica charantia])

HSP 1 Score: 212.6 bits (540), Expect = 3.1e-51
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDF+ATLYI HLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           IIYGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. ExPASy Swiss-Prot
Match: Q55E69 (Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.6e-18
Identity = 41/103 (39.81%), Postives = 70/103 (67.96%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           L   F+Y +I   + +G  V+ +FL+++L G+  L Y++ER+KKCLD +AT+   H  I 
Sbjct: 45  LEQMFEYQSINTHSQSGRVVMTAFLINSLFGSFCLKYIVERSKKCLDHSATVTFIHFIIV 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITR 195
            I  G+P ++ WW +   G+V+M+++GEYLC+++EL +IP+ R
Sbjct: 105 WIVSGFPKTVVWWAIQLIGMVIMAMIGEYLCMRKELMDIPLQR 147

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BLAST of Clc09G02360 vs. ExPASy Swiss-Prot
Match: A7S6Y0 (Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.1e-17
Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = 0


Query: 95  FFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFICIIY 154
           FF Y  + +S+  G  ++ +F L++L GA  L ++++RAK+CLDF  T +I HL  C IY
Sbjct: 50  FFAYKELDISSLKGKLLMIAFCLNSLTGAMALWFIVKRAKQCLDFTTTAHIVHLVFCCIY 109

Query: 155 GGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPIT 194
            G+P S TWW++N   L +M+++GE++C+K EL+ I ++
Sbjct: 110 AGFPFSWTWWLLNIICLALMAVIGEFVCMKTELKAIKVS 148

[Close]

BLAST of Clc09G02360 vs. ExPASy Swiss-Prot
Match: Q78S06 (Protein SYS1 homolog OS=Mus musculus OX=10090 GN=Sys1 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-16
Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 0


Query: 81  LPSMLVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFA 140
           L   LV     L   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF 
Sbjct: 36  LVDALVRSSPSLDQMFDAEILGFSTPPGRLSMMSFVLNALTCALGLLYFIRRGKQCLDFT 95

Query: 141 ATLYIFHLFICIIYGG-WPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRL-RSN 200
            T++ FHL  C +Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP++   +SN
Sbjct: 96  VTVHFFHLLGCWLYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLSSAPKSN 155

[Close]

BLAST of Clc09G02360 vs. ExPASy Swiss-Prot
Match: Q8N2H4 (Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-16
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 85  LVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLY 144
           LV     L   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF  T++
Sbjct: 40  LVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVH 99

Query: 145 IFHLFICIIYGG-WPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRL-RSNV 200
            FHL  C  Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 100 FFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of Clc09G02360 vs. ExPASy Swiss-Prot
Match: A4K2N5 (Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-16
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 0


Query: 85  LVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLY 144
           LV     L   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF  T++
Sbjct: 40  LVRSSPSLDQMFDAEILGFSTPPGRLSMMSFILNALTCALGLLYFIRRGKQCLDFTVTVH 99

Query: 145 IFHLFICIIYGG-WPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRL-RSNV 200
            FHL  C  Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP+    +SNV
Sbjct: 100 FFHLLGCWFYSSRFPSALTWWLVQAVCIALMAVIGEYLCMRTELKEIPLNSAPKSNV 156

[Close]

BLAST of Clc09G02360 vs. ExPASy TrEMBL
Match: A0A1S3CGS5 (Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 3.0e-52
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDFAATLYIFHLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I+YGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. ExPASy TrEMBL
Match: A0A0A0KC23 (Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.7e-52
Identity = 105/108 (97.22%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATI+VSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDFAATLYIFHLFIC
Sbjct: 45  LVYFFDYATISVSTATGWCVIASFLLSAIAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           IIYGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. ExPASy TrEMBL
Match: A0A6J1CPG7 (Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-51
Identity = 105/108 (97.22%), Postives = 107/108 (99.07%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDF+ATLYI HLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           IIYGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. ExPASy TrEMBL
Match: A0A6J1GPI7 (Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 9.6e-51
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFLLSALAGA YLVYLIERAKKCLDFAATLYI HLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLLSALAGAVYLVYLIERAKKCLDFAATLYILHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I+YGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. ExPASy TrEMBL
Match: A0A6J1JZ66 (Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.6e-50
Identity = 103/108 (95.37%), Postives = 106/108 (98.15%), Query Frame = 0


Query: 92  LVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLYIFHLFIC 151
           LVYFFDYATITVSTATGWCVIASFL+SALAGA YLVYLIERAKKCLDFAATLYI HLFIC
Sbjct: 45  LVYFFDYATITVSTATGWCVIASFLISALAGAVYLVYLIERAKKCLDFAATLYILHLFIC 104

Query: 152 IIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I+YGGWPSS+TWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV
Sbjct: 105 IVYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 152

[Close]

BLAST of Clc09G02360 vs. TAIR 10
Match: AT1G79990.1 (structural molecules )

HSP 1 Score: 175.3 bits (443), Expect = 5.1e-44
Identity = 83/114 (72.81%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 85  LVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLY 144
           L +P   LVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDF+ATLY
Sbjct: 38  LRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLY 97

Query: 145 IFHLFICIIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSN 199
           I HLF CI+YGGWPSS+ WWVVNGTGL VM+LL EYLCIKRE REIP+ R  SN
Sbjct: 98  IIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSN 151

[Close]

BLAST of Clc09G02360 vs. TAIR 10
Match: AT1G79990.2 (structural molecules )

HSP 1 Score: 174.5 bits (441), Expect = 8.6e-44
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 85  LVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLY 144
           L +P   LVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDF+ATLY
Sbjct: 38  LRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLY 97

Query: 145 IFHLFICIIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I HLF CI+YGGWPSS+ WWVVNGTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 98  IIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

[Close]

BLAST of Clc09G02360 vs. TAIR 10
Match: AT1G79990.4 (structural molecules )

HSP 1 Score: 174.5 bits (441), Expect = 8.6e-44
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 85  LVLPHSCLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFAATLY 144
           L +P   LVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDF+ATLY
Sbjct: 38  LRVPRLSLVYFFDYATLTTSTFTGWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLY 97

Query: 145 IFHLFICIIYGGWPSSITWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSNV 200
           I HLF CI+YGGWPSS+ WWVVNGTGL VM+LL EYLCIKRE REIP+ R  S V
Sbjct: 98  IIHLFFCIMYGGWPSSMAWWVVNGTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152

The following BLAST results are available for this feature:

BLAST of Clc09G02360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898906.1	4.7e-52	98.15	protein SYS1 homolog [Benincasa hispida]	[more]
XP_008462142.1	6.2e-52	97.22	PREDICTED: protein SYS1 homolog [Cucumis melo]	[more]
XP_011659561.1	1.4e-51	97.22	protein SYS1 homolog [Cucumis sativus] >KGN45351.1 hypothetical protein Csa_0161...	[more]
KAG6575548.1	1.8e-51	67.74	Protein SYS1-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022143685.1	3.1e-51	97.22	protein SYS1 homolog [Momordica charantia]	[more]

BLAST of Clc09G02360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55E69	4.6e-18	39.81	Protein SYS1 homolog OS=Dictyostelium discoideum OX=44689 GN=sys1 PE=3 SV=1	[more]
A7S6Y0	5.1e-17	41.41	Protein SYS1 homolog OS=Nematostella vectensis OX=45351 GN=sys1 PE=3 SV=1	[more]
Q78S06	2.0e-16	41.32	Protein SYS1 homolog OS=Mus musculus OX=10090 GN=Sys1 PE=2 SV=1	[more]
Q8N2H4	3.3e-16	41.88	Protein SYS1 homolog OS=Homo sapiens OX=9606 GN=SYS1 PE=1 SV=1	[more]
A4K2N5	3.3e-16	41.88	Protein SYS1 homolog OS=Papio anubis OX=9555 GN=SYS1 PE=3 SV=1	[more]

BLAST of Clc09G02360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGS5	3.0e-52	97.22	Protein SYS1 homolog OS=Cucumis melo OX=3656 GN=LOC103500569 PE=3 SV=1	[more]
A0A0A0KC23	6.7e-52	97.22	Protein SYS1 homolog OS=Cucumis sativus OX=3659 GN=Csa_7G446680 PE=3 SV=1	[more]
A0A6J1CPG7	1.5e-51	97.22	Protein SYS1 homolog OS=Momordica charantia OX=3673 GN=LOC111013526 PE=3 SV=1	[more]
A0A6J1GPI7	9.6e-51	96.30	Protein SYS1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111455962 PE=3 SV=1	[more]
A0A6J1JZ66	1.6e-50	95.37	Protein SYS1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488736 PE=3 SV=1	[more]

BLAST of Clc09G02360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79990.1	5.1e-44	72.81	structural molecules	[more]
AT1G79990.2	8.6e-44	72.17	structural molecules	[more]
AT1G79990.4	8.6e-44	72.17	structural molecules	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019185	Integral membrane protein SYS1-related	PFAM	PF09801	SYS1	coord: 85..191 e-value: 1.7E-32 score: 112.5
IPR019185	Integral membrane protein SYS1-related	PANTHER	PTHR12952	SYS1	coord: 91..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR12952:SF3	PROTEIN SYS1 HOMOLOG	coord: 91..198

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G02360.1	Clc09G02360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006895	Golgi to endosome transport
biological_process	GO:0043001	Golgi to plasma membrane protein transport
biological_process	GO:0034067	protein localization to Golgi apparatus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0005802	trans-Golgi network