Clc09G02075 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G02075
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c-type biogenesis protein
LocationClcChr09: 1705371 .. 1712850 (-)
RNA-Seq ExpressionClc09G02075
SyntenyClc09G02075
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATCTTGTGGTGGTGGCCGAGGCAAGAAAGCACCAACGCCTTATCTTTCAAGAGGTTCGTCAATCCGAGGCCAGGAATTCCCAATAATCCCAAAATTTCGACTTAATTTTTGATTTGGGAGTCTAAATTTTTCGCTCGAAGTTGATTGATCTCGCCTTCTACTCACCAATCATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAGTAAGTTCATCACTCTAATAGAAATCCAATCATCCATAGTTGATTCCTTATTATTTCAATCTGTCATCCGTTTGAACTTCCTGCGTTCAAATTGATGTCCGTTGGATCGTGTTTATTGAGCTGTATTTCTCGATGTTTATTGTGCATTTGTTTGAATTTTGAACTAAAGTGGTTATTTCAATGCGACGGTGAAAGCAATTTTTGTAGGAGTTTAGGTCTTAGTGAGAGGTGCAGTTTGTGGTTGGACTGGAAAATGGTGCTTGTTACTCTTTTAAGACATGGCCTTAAGGTTATGGAGATGGAGAGGGTATCAGTTTATAGGTTTGGAACTTTAGGATCTTCAAATTTAGAGAGTTTGCATAATTGACTAGTGATGTTGAAGATTTAAACATCTGTATTGGTAGATAATCGTCATCAACCTCTGGAAGCATCACATTCCTTGCATCATTTCTTCATAGAATCAACCATTGCAACTTCCTTCCAGACTTGAATTCAGCATTAGTATTTTCTAGTCATTAAACAAGAGGGCTAACCAGTGCACCTCACGTGTAGTAGCCTAGAAAATTTGAGAGTGCTAGCTTGTTTCCACACACTAACATTCACATTTTACCACACAACTCACTTGCATAGTTTGAGTGGTTCACAATTTTTTTAGGTCTATTTACAATAACTGTGTATATCTATGGGGGTAGGAGTTTCTCGTCGTGGCCTCCGGTGGTTGGGCACTCCTTAGGTAGCTTCGACTATGAAAATTGTATAAATCACCATAGATTGGTCTAGTGGTCTATCATGACCCATGTAAATAATAAAAGAGTTTGAAAGGAATGAGTTTAGGCCATAGTGGTCACTTGCCTAAGATTTAGTATTGAACAAGTTTTCCTAACAACAAAATGTAGTTTGGTCAAACGATTGTCTTGCAAGAATAGTGGTTTGTGCAAGTTGGCCCAGACACTCATGGATGTAAAAACGAAAAAAAAGTTATTGTGAATTGTTTGTAAATTTGCATCTAAATTTTTATAGCTTCTTTATATTTTTTTATATGAACATTTCAAGGTTATGCTTAAAAACTAGAAAATATAATTCCCTGATTCCTAGCCATGTATGGTAGACAATATTTTGGAAGGACACCTTTGTTTAATTGTGTCGGAGTTTTCCATATCTCGTTCATCATACTACCCCTTGTTAGTAAATAATTTATCAAATATTGCAGACAGACATTCTGGCAGTGTTGTTGTAAAGGCTGTTGGAGGCAGCTCTGAGTCTTCTACTTCCCTCGATATTATTAAGTCTGTTCGAAATGTTGTAAGCACTTAATTCTCTGTCCCTCTTTATGTAAGCCTTTTTTATGCTTTGAAGCATCTTCATTTTGGGGGGGGGGGGGGGGGGGGGGTGGTTCTACAGTTTTAAATTTTCCTGACCTATATATGGGTGATGAAAGTTTCCTTTGTTTGAAATTTACAAGTGATGTTTGCTTTTCTGAGGGAAGAGTACTAGAAAAGAGGGTGAGTTTCTTTCCTCCAAATGTATTAGTTGTTCTCTTTCGTTATATTCTGTGGATGACAAATTTTACCTTAGTGCTGTAAGTATTTATATTTGGTTAAAATACCATTTTAGTTTATGGACTTCGCTTAAATAATAATAATCAAAATAATTACCAACTTGAGCATAATTTAACTAGTTAAGGTATATGTTCTTGTGGAGGAGGTCCAAAGTTCAAATCCCCTCTAAAAATAATGTGAATATGTTTCTAAAATCTATAGAGGGAATGTTGATTAAAACTAATTTTTTAAAGAAAAGTCAACAATAGACAAATATACTATTTTTAAGATTTATTGAAGGTATACAACCTAAATTTAGACGTAAGAAAGTAGAAAAACTAAAATAGAATAAAATTGTATTTTAACTTTATATTTTTCTGGTTAACTTGGAACAGTGGGATCAGCCTGAAGATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGTAATTTAAAAACAATGACCCATTTGGACAAATGAGAGACAACATAATCACACAGCACGTGGAATTTTCAACCGTGTCAGTGATTCCTCATGTTTTGTTCCTTTCATCTTCAACTCATGAACTTGTTTATTCTGATTTGCTTGTAGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGGTGAGTAACAAGATATATATCAACAACTTCTCTACTGCCTTTGGCAATTGTGAACTCTGAAACCATGGTTTTCTCTCCTTACAACTTCCATTACTGACCAGTGCTTTTGTTTTCCTCTATCAATTCCAGTGGTTCGTGTATCGCTACCTCCTGTTCAAGCCAAACCGGTGAGCAAAATCGATTAGGATTTTTTTTCATTTAATTTTGTTGAGGATCTCATATCAGAAAAATCAAAAGACGTCACACTTTTAATAAGATAGCTAAGACTCTTAATAAGGTAGATGGGTTACTCATTTCATTGCTAATTGGTTTCGAGATGGAACTCCATATTATCTAATAGGTTCGCATATGAAGTCTTCTCGATCCTGTATATTCGACATTTTTGCTGTCTTTAGCTTGTTGTTGTGAAATGACATTTTGTTGTAGCAAACAACCTTCAACTGACTTGTCTTTTTCACTGCAGGGAAGAGCTTCTGCAGATAATCAACAAGTCAATAGTTGATGTATTTGGACAGTAAATTGTTCTTGGTTGTAGAAGGCCTGAGTTGGACCAATCTTCATTATATTCCTTCTTTGTTACAAAGTGGTGAGTAAAGATGGTTGGGTTGGCCGCTGGGTCGAGTTGTATTCAACAGTCAAGTGTGAATTTTTTAAATCAAACTTGGTGTTTGATTCATCAATGCATTGCAATCCCAAATCTCCAATCTCTATAGTCTATACTCATCGCTTTCTGGTTCAAAATTTCTTTTATTTGATATTATTTCATAGTTTCTTGATATTATAATACCGATAAGATAAGGCCCTAGTTTATGGGTGTTGGATCTAAGGTTTGACATCATTTTGTGCCTTGTAGACTGTAAGGTATGGATATGTTAATCATATAATTCAATTAACCAAGAGGAAATCGTGAAAAATAATTATGAAAAAAATCTTAACCATTAATGTTTAGTACAACTAATCATTTATTGTCAACCTGACCATAATTTAACTGAAATGAATTTATATTATCTCTCGATCGTTGAGGCATTTTTTAATTTATAAAAATTCACTTTCTAATTTTTTTCTATAACCATTGTTTTTCTTATTCTTTTATCAAATAATTTAGATTTTAAAAAATTAAGTTGTAACTTAAACAAATACACTTTTAATAAAAGTGATTGTCTTATAATAAATTTTAAGGATTAGAAGTATTTTTGAATGGATGATTCAAAATAAATGACCAAAATGTCATTTTACCTAAAATTTAAAATTAAGGATTTGTAACTTTTGCTTCTCGCACGGTTATTCTTTAGCAAATGATATTTTGGATGTGAAAGTTGTTTAACTATTCAAAAATCAATAAATTTAGATATGAAATATTAATGTAACATAATTGAAATAGTAAGTTTATTATTATTGTTCAAATTATCTTAAATGATAAAATTGGTGTGAAAGTTTTTTTTCTACATGTGAAAACAACCCTAATTATTAGTAATTTAATATTAAATCACCAAACATTACTTACTTTCTTTTCTTGGCGCTTCCTACGTCGATTCTTCAACTGAAGCCAGTTCTCCGTCAATCGCAGTCGCCACTCGCGCCGGTGAGCACCCGGCAGCAAATGATTAATTACGTTTCTCATCTTCAGCAACAGATTGACTTGATCTCTGGATCTTCGGGGGAACCTGAGGTTTAATCTCTATCTTTGATAACTATCCGACCACCGCCCCTTTCATTTTACTGCCGCCGGCGAGACAGTTGACGATTCGAAAACCCTTTTGTCTATTGCTGTATATCGTTTCGGTTTTCTTTCGCTTAATTGTTTGTTGGGGGCCATTTTCTGGTTTTGAATTTTGCATTCTCGATATTTTCGTTCGAATTGCTATTAGTGTCTGCATTTGTTGCCCTAATGTGTGTGTGCGTGCGCGCGCGCATTTAGGCACGAAGTTTCCGAATCTGGGGAAGTCTAGGACTGAACCAGTTGGTCGGTTTATATTAAAAAGAGGCAGAATTAATGTTATTTTACCTGTTTATATTTTAAAAATCTTACAAGATTATTTACTCTACACAAATCAATGACAACGTCACAACGGTAATGAAGTTCAGAATACTATATATAAAAAAGGATAAACTCGATTATTAATTATTGTTTTTGGGAGTTCATGCTATTTACGCTAAATTCTTGAACCTTTGAGCAACCTGGTTAATTAAATTCGGTACAAAATTCCTTTCACTTTTTTTCGATTCCATTAATCCTATTGAGAATTCATAGTATTTCTTTATGAGAAAGAATAACCGGGGCTAGATTCATAATGTTTACTTCTTCATCTTTGTAGTTTGATAACATTGTAACTGGAATTTGATCTGCTATTTTCTTTCTGACTTGCTCGATGTTTATGAGGTTTTCAGCTGAAGAAGGTTTAAACTTTTAAGCTTGATTTATCTTTAACTTGTATTTCGCATTCAAATGATTTCTTGGTATTTTCTTGCAGTTGCTGTGCAGTCTGGTCAGAGCCGAGGTGTCACAGTGTCTAAAATGGAGAGTGATGAGGATGCTGTGAAAAAAACGCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGCATTGAGTGTGGCAGTCAGTCCATTGAAGATTCACAAGCAGATATTGCCATTCTCCTCAGAAAGGTACCGTTTCTTTTAGATAAACTCCAAGCTAAACAAGTTAACTAAGAGCTGAAAAATTGGGAAACTCTGGAAAAGAATAATACAGAAGTTCTAGATCCTTCTCTCTTGGGCTCCCTTTTTTCAGTTTAAAGTTGGAAACAAAATATTAATGATGAAAAGCAGAAAAAAGGGATTACCAGAAAGTGATGAAAGTTGTTACCAAATCTCCTCATAGGATTGCAGCACATAGAGATTATAATAATAATTCAGCTTAACAAGTAAAGAGAACAGGAGGCAGTCATTGAAGTTCCAATGATTCTTCTCAAACCAAATACTTCAAATAACTGGCAAAACCATCTCAATCCAAAATCTTTTAGCCTTTTGATGTGGGGAATTGCCAGTAATATTTTGAGCCAGAAATCCTCCACCCTTTGTGGCAAGTACCAATGGAGGTTGAAAGTTACACAAAAGATGGTTATGTAAAGAGGCAATGTAGCATTTGGTGGTTCATTATTTCATTATTTTATTTCCATAAACTACTTAAAGGAATTGGAATTTTTTTGGGGGATTTCATTAGTCCTGTAGAGTTGGTGTTTTGATGCATGAAATCTTCCTTTGGGTTAGTAGATTACCTCCAAAATAACTATCTATGCTGGCAGCCCCTTGGAAAATTTTCTTAATGAACTCCATTGGATCACAGTGCCTCTTATCGCATAATGATGGACTTAAAAGACTTATTTCCCAGATCATGAACCTTCGCTACATGATGATTTCTCACAGATTTGATTAGTTTCCTATCTTCTGCCAATAATTCTTGGATCAATATTGTCTTGCGATAAATTTGCTTGATATTGGCTGTATTTGTTATATCACCAATAGTTGATTCGTGATGAGATTCGGTCTGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACGATCCTTTATACCCCAAAGTTCGACCTTCAAACTGCAGCGATATGGCTATCACCGGTCAGTTAATATTAGTAAGAAAGTCAAGATTAAGTAAATATATCTGCCTATTTCTTCTAATTCTAGTTTTAAATATGTTACTCTGATATAGGTGTTATTGGCTAGTGCTGCCGCAGGAGTATGGGCTTATAGTAAGCACAAGCAAAAGTCCAACGTTCACATCATGGCTTTAAATTTAGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTTCTCTCACCTCCACCTCCTCAGAGAACCTTGTCCTCATGGTGGAGGAGTTGGCATAGGCAATGAGGCAACTACTCTCTATTGCTAGCTCGAATAATGCTTCAAAGAGTTTCAGAGTATTTTGAAGATATATAAATTAGATTACAAATATGAAAATCAGCATTGAGTGAGGTTTATTTGGTTTTCTCCAGTGAATCGTTGCAATTTTGCGTATTGTACTCAACAATCAATTTATGACTAGTTTTAGATACTCACCTAGTTAGGTTCGTTGGCTTTTCTGGAAGAAACAAGCATAATTGCTGAGAGGAAGTCGGGTGGGCTGCTATCTCCACTATCCAACACATATCCGCTCAGTCAATGATCAACACAGGCACCAAAGTGTTTTGATGGTTATCTTAATCTAAGAAACCATGTAAACGCAATTATGCGTGTACTTTTTACAGTTTGGGGAGAAGAGATTACTGCAAGTTGTCCCTCCCCACCCTCCATGATGCTGACTTCAATTTATAACAATGAAGTTTTGTTAACATAGCTCTTCAACTTGGTTTTATTTCTTTTGTTTTTATGGTTGGTGAGTGGAATAATAGGGATGGAATTGGGAAGACTTCAACATTGGAAAACTCCTTACAACCTCAATGCAACTGCAAGCAAGGTACAACAGTTACAAAACACAACATTTCATATTCATCTTCAAGTAGATATTTCTTTGCTAATATCATATGGATTTTAGTTATGGTGAAAATAAGCAATCCGATCAACTTGAATTTGCAGGTCCAGACATGTATCCAGCTGCAGTTAACCCTTATCCTAGTTATGGTGAAAATGCAGAGTCTAATCACGTTGAATTCTCAGGTGCAACCAATGCATCAAGCTAACTTCTCTGTTGGCCTACTTACAAGTTATGGTGAAAATACTCAATCTCCTCAACCCAACTACTCTGTTCCAACAACCAACTATCAAGCTAGCCAAATGTCAGTACTGGTGCAAATATACATTTTGCTCCAGGTCCAAACACATATCAAATAAATACAGTCCAAGGGACTGTTTGGAGCACTGGATCATTTGATGGCCATGAAGATGAGAGAAATGGTTAG

mRNA sequence

CAAATCTTGTGGTGGTGGCCGAGGCAAGAAAGCACCAACGCCTTATCTTTCAAGAGGTTCGTCAATCCGAGGCCAGGAATTCCCAATAATCCCAAAATTTCGACTTAATTTTTGATTTGGGAGTCTAAATTTTTCGCTCGAAGTTGATTGATCTCGCCTTCTACTCACCAATCATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGTCGCCACTCGCGCCGGTGAGCACCCGGCAGCAAATGATTAATTACGTTTCTCATCTTCAGCAACAGATTGACTTGATCTCTGGATCTTCGGGGGAACCTGAGTCTGGTCAGAGCCGAGGTGTCACAGTGTCTAAAATGGAGAGTGATGAGGATGCTGTGAAAAAAACGCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGCATTGAGTGTGGCAGTCAGTCCATTGAAGATTCACAAGCAGATATTGCCATTCTCCTCAGAAAGTTGATTCGTGATGAGATTCGGTCTGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACGATCCTTTATACCCCAAAGTTCGACCTTCAAACTGCAGCGATATGGCTATCACCGGTGTTATTGGCTAGTGCTGCCGCAGGAGTATGGGCTTATAGTAAGCACAAGCAAAAGTCCAACGTTCACATCATGGCTTTAAATTTAGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTTCTCTCACCTCCACCTCCTCAGAGAACCTTGTCCTCATGGTGGAGGACTCTTCAACTTGGTTTTATTTCTTTTGTTTTTATGGTTGGTGAGTGGAATAATAGGGATGGAATTGGGAAGACTTCAACATTGGAAAACTCCTTACAACCTCAATGCAACTGCAAGCAAGGTCCAGACATGTATCCAGCTGCAGTTAACCCTTATCCTAGTTATGGTGAAAATGCAGAGTCTAATCACGTTGAATTCTCAGGTCCAAACACATATCAAATAAATACAGTCCAAGGGACTGTTTGGAGCACTGGATCATTTGATGGCCATGAAGATGAGAGAAATGGTTAG

Coding sequence (CDS)

ATGGCTTCCATTGCTGCTACTCTACCTCCGGCTCCGCCATTGTTGACACCTCGCAAAATCTTTACCCTTCTGAACACTTCTCAGAAGCTCACTGTCTTCCCCATTTCAAATCGACTGGCGCTTATTGGCCTGGGATTTGCAGCTGTAGCAGCTGCATGGACAGCAACAAATCTTGTTACGGCCATTGATAAGCTACCACTACTTCCAGGTGCATTAGAATTCATAGGAGCACTGGTTTCTTGGTCGCCACTCGCGCCGGTGAGCACCCGGCAGCAAATGATTAATTACGTTTCTCATCTTCAGCAACAGATTGACTTGATCTCTGGATCTTCGGGGGAACCTGAGTCTGGTCAGAGCCGAGGTGTCACAGTGTCTAAAATGGAGAGTGATGAGGATGCTGTGAAAAAAACGCAGCTGGTGGAAGCCCGAGCAAGAAATATTAGTCACAATGTTAGGTGCATTGAGTGTGGCAGTCAGTCCATTGAAGATTCACAAGCAGATATTGCCATTCTCCTCAGAAAGTTGATTCGTGATGAGATTCGGTCTGGGAAAACGGACAAGGAGATCTATAAAAAGCTTGAGAATGATTATGGGGAGACGATCCTTTATACCCCAAAGTTCGACCTTCAAACTGCAGCGATATGGCTATCACCGGTGTTATTGGCTAGTGCTGCCGCAGGAGTATGGGCTTATAGTAAGCACAAGCAAAAGTCCAACGTTCACATCATGGCTTTAAATTTAGTCAGGGGTGTTCCATTGACCCCTAAAGAGAAGCAAACCATGTTAGATCTTCTCTCACCTCCACCTCCTCAGAGAACCTTGTCCTCATGGTGGAGGACTCTTCAACTTGGTTTTATTTCTTTTGTTTTTATGGTTGGTGAGTGGAATAATAGGGATGGAATTGGGAAGACTTCAACATTGGAAAACTCCTTACAACCTCAATGCAACTGCAAGCAAGGTCCAGACATGTATCCAGCTGCAGTTAACCCTTATCCTAGTTATGGTGAAAATGCAGAGTCTAATCACGTTGAATTCTCAGGTCCAAACACATATCAAATAAATACAGTCCAAGGGACTGTTTGGAGCACTGGATCATTTGATGGCCATGAAGATGAGAGAAATGGTTAG

Protein sequence

MASIAATLPPAPPLLTPRKIFTLLNTSQKLTVFPISNRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVSWSPLAPVSTRQQMINYVSHLQQQIDLISGSSGEPESGQSRGVTVSKMESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALNLVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRTLQLGFISFVFMVGEWNNRDGIGKTSTLENSLQPQCNCKQGPDMYPAAVNPYPSYGENAESNHVEFSGPNTYQINTVQGTVWSTGSFDGHEDERNG
Homology
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BLAST of Clc09G02075 vs. NCBI nr
Match: XP_038904619.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904620.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida] >XP_038904621.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-75
Identity = 145/153 (94.77%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME+DEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   METDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKLENDYGET+LYTPKFDLQTAA+WLSPVL+A AAAGVWAYSKHKQ+SNVHIMALN
Sbjct: 61  KEIYKKLENDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKHKQRSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWR 280
           LVRGVPLTPKEKQTMLDLLSPPP QRT SSWWR
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTSSSWWR 153

[Close]
BLAST of Clc09G02075 vs. NCBI nr
Match: XP_008452301.1 (PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_008452302.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >XP_016901245.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo] >KAA0046887.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa] >TYK03260.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-73
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKLENDYGETILYTPKFDLQTA +WLSPVL+A AA GVWAYSKHKQ+SNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRT 281
           LVRGVPLTPKEKQTMLDLLSPPP QRT SSWWR+
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRS 154

[Close]
BLAST of Clc09G02075 vs. NCBI nr
Match: XP_022152937.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia])

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-73
Identity = 140/154 (90.91%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           MES++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIY+KLE+DYGET+LYTPKFDLQTAA+WLSPVL+A AAAGVWAY+KHKQK+NVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRT 281
           LVRGVPLTPKEKQTMLDLL+PPPPQRT SSWWR+
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRS 154

[Close]
BLAST of Clc09G02075 vs. NCBI nr
Match: XP_004149299.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >KGN56203.1 hypothetical protein Csa_010849 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 7.0e-73
Identity = 140/153 (91.50%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME+DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   METDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           K+IYKKLENDYGETILYTPKFDLQTA +WLSPV++A AA GVWAYSKHKQ+SNVHIMALN
Sbjct: 61  KDIYKKLENDYGETILYTPKFDLQTAGLWLSPVIVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWR 280
           LVRGVPLTPKEKQTMLDLLSPPP QRT SSWWR
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWR 153

[Close]
BLAST of Clc09G02075 vs. NCBI nr
Match: XP_022953979.1 (cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953980.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953981.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953983.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022953984.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata] >XP_022992421.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992422.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992423.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992424.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_022992425.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X1 [Cucurbita maxima] >XP_023549463.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549464.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549465.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >XP_023549466.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita pepo subsp. pepo] >KAG7014070.1 Cytochrome c-type biogenesis CcmH-like mitochondrial protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.4 bits (729), Expect = 7.0e-73
Identity = 141/153 (92.16%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           MESD DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEI+KKLENDYGETILYTPKFDLQTAA+WLSPVL+A AAAGVWAYSK+KQKSNVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWR 280
           +VRGVPLTP+EKQTMLDLLSPPPPQR  S WWR
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWR 153

[Close]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match: B8AFK5 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. indica OX=39946 GN=CCMH PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-63
Identity = 119/152 (78.29%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           M ++ED VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+D
Sbjct: 1   MATEED-VKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKL+ DYGETILYTPKFDLQTAAIWLSPV++   AAGVWAY KH+Q++NVHIMALN
Sbjct: 61  KEIYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYKKHRQRTNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWW 279
           LVRGVPLTP+EK+TMLD+L+PPPP    + WW
Sbjct: 121 LVRGVPLTPREKETMLDVLTPPPP---ANKWW 148

[Close]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match: Q6K7S7 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa subsp. japonica OX=39947 GN=CCMH PE=2 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-63
Identity = 119/152 (78.29%), Postives = 138/152 (90.79%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           M ++ED VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGK+D
Sbjct: 1   MATEED-VKQRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKL+ DYGETILYTPKFDLQTAAIWLSPV++   AAGVWAY KH+Q++NVHIMALN
Sbjct: 61  KEIYKKLQADYGETILYTPKFDLQTAAIWLSPVIVGGVAAGVWAYQKHRQRTNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWW 279
           LVRGVPLTP+EK+TMLD+L+PPPP    + WW
Sbjct: 121 LVRGVPLTPREKETMLDVLTPPPP---ANKWW 148

[Close]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match: Q9XI46 (Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMH PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.4e-52
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIY KLE+++GET+LY PKFDLQTAA+WL+PV++A   A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSP--PPPQRTLSSWWRTL 282
           L+RGVPLTPKE+ T+LD+L P  PPPQ  +S   R L
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRWL 157

[Close]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match: P45405 (Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=ccmH PE=3 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 9.1e-15
Identity = 46/136 (33.82%), Postives = 74/136 (54.41%), Query Frame = 0 

Query: 132 DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYK 191
           D +      E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G ++ ++  
Sbjct: 25  DEIMSDPAKETRARDLSRELRCMVCQNQSIDDSDAPLARDLRLLVRERIAAGDSNSQVLD 84

Query: 192 KLENDYGETILYTPKFDLQTAAIW-LSPVLLASAAAGVWAYSKHKQKSNVHIMALNLVRG 251
            L   YGE +L  P+F+ QT  +W L P+LL      +W   + + +S   + A      
Sbjct: 85  FLVARYGEFVLLKPRFERQTLLLWLLGPLLLTGGGLALWLQIRRRSRSGADLPA------ 144

Query: 252 VPLTPKEKQTMLDLLS 267
            PLTP E+  +  L+S
Sbjct: 145 PPLTPDEEARLAALMS 154

[Close]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match: P45406 (Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX=266834 GN=ccmH PE=3 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 3.8e-13
Identity = 44/136 (32.35%), Postives = 75/136 (55.15%), Query Frame = 0 

Query: 132 DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTDKEIYK 191
           D V     +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G +D+ +  
Sbjct: 24  DEVLADPALEARARAISAQLRCMVCQNQSIDDSNAELAKDLRLLVRERLKNGDSDEAVIS 83

Query: 192 KLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALNLVRGV 251
            + + YGE +L  P+ + +T  +W  P +L  A       +  ++ +         V G 
Sbjct: 84  YVVSRYGEFVLLNPRLEAKTLVLWGMPAILLVAGIITLVVAARRRGAR--------VPGA 143

Query: 252 PLTPKEKQTMLDLLSP 268
           PL+ +EK+ +  LL P
Sbjct: 144 PLSDEEKERLDRLLRP 151

[Close]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match: A0A1S4DZT6 (Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 5.2e-74
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKLENDYGETILYTPKFDLQTA +WLSPVL+A AA GVWAYSKHKQ+SNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRT 281
           LVRGVPLTPKEKQTMLDLLSPPP QRT SSWWR+
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRS 154

[Close]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match: A0A5A7TY95 (Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00810 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 5.2e-74
Identity = 143/154 (92.86%), Postives = 148/154 (96.10%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME DEDA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD
Sbjct: 1   MEIDEDALKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIYKKLENDYGETILYTPKFDLQTA +WLSPVL+A AA GVWAYSKHKQ+SNVHIMALN
Sbjct: 61  KEIYKKLENDYGETILYTPKFDLQTAGLWLSPVLVAGAAVGVWAYSKHKQRSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRT 281
           LVRGVPLTPKEKQTMLDLLSPPP QRT SSWWR+
Sbjct: 121 LVRGVPLTPKEKQTMLDLLSPPPSQRTPSSWWRS 154

[Close]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match: A0A6J1DHL6 (Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020546 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 5.2e-74
Identity = 140/154 (90.91%), Postives = 152/154 (98.70%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           MES++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIY+KLE+DYGET+LYTPKFDLQTAA+WLSPVL+A AAAGVWAY+KHKQK+NVHIMALN
Sbjct: 61  KEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQKTNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWRT 281
           LVRGVPLTPKEKQTMLDLL+PPPPQRT SSWWR+
Sbjct: 121 LVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRS 154

[Close]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match: A0A6J1JTI4 (Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 141/153 (92.16%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           MESD DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEI+KKLENDYGETILYTPKFDLQTAA+WLSPVL+A AAAGVWAYSK+KQKSNVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWR 280
           +VRGVPLTP+EKQTMLDLLSPPPPQR  S WWR
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWR 153

[Close]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match: A0A6J1GPV4 (Cytochrome c-type biogenesis protein OS=Cucurbita moschata OX=3662 GN=LOC111456378 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 3.4e-73
Identity = 141/153 (92.16%), Postives = 148/153 (96.73%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           MESD DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+D
Sbjct: 1   MESDADAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEI+KKLENDYGETILYTPKFDLQTAA+WLSPVL+A AAAGVWAYSK+KQKSNVHIMALN
Sbjct: 61  KEIFKKLENDYGETILYTPKFDLQTAALWLSPVLVAGAAAGVWAYSKYKQKSNVHIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSPPPPQRTLSSWWR 280
           +VRGVPLTP+EKQTMLDLLSPPPPQR  S WWR
Sbjct: 121 IVRGVPLTPREKQTMLDLLSPPPPQRAASLWWR 153

[Close]
BLAST of Clc09G02075 vs. TAIR 10
Match: AT1G15220.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-53
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIY KLE+++GET+LY PKFDLQTAA+WL+PV++A   A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSP--PPPQRTLSSWWRTL 282
           L+RGVPLTPKE+ T+LD+L P  PPPQ  +S   R L
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRWL 157

[Close]
BLAST of Clc09G02075 vs. TAIR 10
Match: AT1G15220.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 206.5 bits (524), Expect = 3.9e-53
Identity = 104/157 (66.24%), Postives = 127/157 (80.89%), Query Frame = 0 

Query: 127 MESDEDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKTD 186
           ME  ++  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GKTD
Sbjct: 1   MEKTDEERKKAQMLDARARNISHNVRCTECGSQSIEDSQADIAILLRQLIRNEIGAGKTD 60

Query: 187 KEIYKKLENDYGETILYTPKFDLQTAAIWLSPVLLASAAAGVWAYSKHKQKSNVHIMALN 246
           KEIY KLE+++GET+LY PKFDLQTAA+WL+PV++A   A    Y KH+ + NV IMALN
Sbjct: 61  KEIYSKLEDEFGETVLYAPKFDLQTAALWLTPVIIAGGTAAGIVYQKHRLRKNVDIMALN 120

Query: 247 LVRGVPLTPKEKQTMLDLLSP--PPPQRTLSSWWRTL 282
           L+RGVPLTPKE+ T+LD+L P  PPPQ  +S   R L
Sbjct: 121 LIRGVPLTPKERVTILDVLIPPSPPPQGVVSRLRRWL 157

[Close]
BLAST of Clc09G02075 vs. TAIR 10
Match: AT1G52220.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 9.3e-07
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 37  NRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVS 81
           +RL LIGLGFA + A W + NL+TAIDKLP++    E +G L S
Sbjct: 82  DRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFS 125

[Close]
BLAST of Clc09G02075 vs. TAIR 10
Match: AT1G52220.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 9.3e-07
Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0 

Query: 37  NRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIGALVS 81
           +RL LIGLGFA + A W + NL+TAIDKLP++    E +G L S
Sbjct: 81  DRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFS 124

[Close]
BLAST of Clc09G02075 vs. TAIR 10
Match: AT2G46820.1 (photosystem I P subunit )

HSP 1 Score: 43.1 bits (100), Expect = 5.6e-04
Identity = 18/42 (42.86%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 35  ISNRLALIGLGFAAVAAAWTATNLVTAIDKLPLLPGALEFIG 77
           + ++ A+  L FA V A W +  +++AID+LPL+PG LE +G
Sbjct: 97  VDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVG 138

The following BLAST results are available for this feature:
BLAST of Clc09G02075 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038904619.13.4e-7594.77cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]... [more]
XP_008452301.11.1e-7392.86PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis... [more]
XP_022152937.11.1e-7390.91cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charanti... [more]
XP_004149299.17.0e-7391.50cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus] >... [more]
XP_022953979.17.0e-7392.16cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata... [more]
BLAST of Clc09G02075 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8AFK52.4e-6378.29Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub... [more]
Q6K7S72.4e-6378.29Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Oryza sativa sub... [more]
Q9XI465.4e-5266.24Cytochrome c-type biogenesis CcmH-like mitochondrial protein OS=Arabidopsis thal... [more]
P454059.1e-1533.82Cytochrome c-type biogenesis protein CcmH OS=Bradyrhizobium diazoefficiens (stra... [more]
P454063.8e-1332.35Cytochrome c-type biogenesis protein CcmH OS=Rhizobium meliloti (strain 1021) OX... [more]
BLAST of Clc09G02075 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4DZT65.2e-7492.86Cytochrome c-type biogenesis protein OS=Cucumis melo OX=3656 GN=LOC103493367 PE=... [more]
A0A5A7TY955.2e-7492.86Cytochrome c-type biogenesis protein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A6J1DHL65.2e-7490.91Cytochrome c-type biogenesis protein OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A6J1JTI43.4e-7392.16Cytochrome c-type biogenesis protein OS=Cucurbita maxima OX=3661 GN=LOC111488733... [more]
A0A6J1GPV43.4e-7392.16Cytochrome c-type biogenesis protein OS=Cucurbita moschata OX=3662 GN=LOC1114563... [more]
BLAST of Clc09G02075 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G15220.13.9e-5366.24cytochrome c biogenesis protein family [more]
AT1G15220.23.9e-5366.24cytochrome c biogenesis protein family [more]
AT1G52220.19.3e-0754.55FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT1G52220.29.3e-0754.55FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G46820.15.6e-0442.86photosystem I P subunit [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005616CcmH/CycL/Ccl2/NrfF familyPFAMPF03918CcmHcoord: 127..262
e-value: 8.6E-29
score: 99.6
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 36..104
e-value: 3.7E-9
score: 36.3
IPR038297CcmH/CycL/Ccl2/NrfF domain superfamilyGENE3D1.10.8.640Cytochrome C biogenesis proteincoord: 125..208
e-value: 4.1E-20
score: 73.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..127
NoneNo IPR availablePANTHERPTHR47601FAMILY NOT NAMEDcoord: 127..281
NoneNo IPR availableCDDcd16378CcmH_Ncoord: 140..205
e-value: 4.31479E-25
score: 94.903

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G02075.1Clc09G02075.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0032991 protein-containing complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity