Clc09G02050 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G02050
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Isochorismatase domain-containing protein
Location	ClcChr09: 1674683 .. 1676993 (+)
RNA-Seq Expression	Clc09G02050
Synteny	Clc09G02050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAATTTTGAGTTGGATAATGGGGAATAGATTGTTCGAATTGTTGGATGATTTGAACCCGAATCGTTTCAATAATTTAATCCTATTCGTGATATGATGCGCATAAGATTAAAAAAATAATAAAAAAAATAAAAATAAATTCAAACAGTTGGGAGAGTAAATTTTGGTGAAGCTTACAGTTATCCGGTCGGATTAGTTCATCTGTCGTCGATTCTTCTTCATTGTCAAGCCGTCGCGTTTTCCCCACAATTCCATCATCTTTCACTATCTGCTACTTTTTAGCCATGGCGGACCAGTGGAAACACACTGCTCTTCTTGTTATCGACATGCAGGTTTTTCCCCTAATTTCCTTCCTAATTCAATCCTCTTCTCTGCTCTCACAATCAAACTCTTTCTTCCAATTCTTCCTTACAGAAAGATTTCTTTGACGAACAATCCGTCTTCGCTGTACCAGGAGCCAGCACCATAATTCCAAGCGTCTCCGATGCTGTCGAAATCGCAAGAAAGCGCGGCATGTTCATCGTTTGGGTCCGTTACTTGAAAACGAAAAAGCCCTAATCCTCTGTTTGAATACACTCATAATTTGGATGGATTTCAAAAATTGAATTGAATTAGTGTTTGTTTTGCCCTAGGTTGTTCGAGAGCATGATCCTGAAGGACGAGATGTTGAACGCTTTCGCCGCCATCACTACGGCAGCGGGAAGTCGAATCCGGTGGCGAAGGGAAGCAAAGGGGCAGAATTAGTAGAAGGGCTTGAAGTGAAAGAAGGAGAATACAAATTGGTGAAAACAAGGTTCAGTGCCTTCTTTAATACTAATTTGCATTCTCTTCTACAAGGGCAGGGTATTACTGCTTTGGTTGTCTCAGGTAACATTCTATATATACATATCTTCTGTTAACTCTATTCCAATATGAATTTGTAGATTAAATGGTTGAATTGATGCATATTGTATTATCAATTCCAGGTGTTCAAACCCCAAACTGTATCAGACAGACTGTTTTTGATGCTGTATCTTTGGATTATCATTCTATCACTCTTCTTTATGATGCAACAGCAGCTGCGACTCCCAAAATTCATCATGGTATCTCAAATTTCCTCCTTTATATCCTTTCAGCTTAAATTTTTTAGTTTAGTAGTGTTTTGTAATGTCATTTACTCCTAAATTGATATTGATATTCACTTGTTGGACCTTCTAGTGTGTTGAGTATTGGTATGAATTTAAATTTAGCTAACCCATCAGCTTGAGTTTTTGAGTTGATTACTAATAAGTAATAACAATACTTTGATGGATAGACATTTGTGGTTAGTTGTGACAGTTATGAAACAAATCAGTAAATACATCTCTTACTTCACCTTACAGTATCTATAGTAGAGAGTAATTGTGAGAGATTTGTACTAACCTTGATGTGTTTCTCCTCTGAGATTTCTGAATAAAATTCCTCTGCTGCTCCTTTGAAAGTGGATGTAAGTAAGCCTTTACGGTTGAACCACTATAATTTTGATTGTCTTCTTCTTCTCGTTTTCAAGAAATAACAACATTTAGATTGGGTGTGATTTTGATATTGATTGATGAGGGAATTTTCTGTATCTGTTCTGTATCAGATAATATCACTGACATGGAGAAAGTGGGTGTTGTGGTCATGAGAGTTGATAAATGGGGGAAGTCTGATTCTAATGTTTGAACCCAAGTCTTATACATCTTGGTGCTGCTGGTAATTTTTATCTACTGCAATGAATCCATGGTTTGATCTTCAACCATGCTTCTTGAAATAATCTCTCTCTCTTACTCTCTCACTTAAGAACTTTGATTTTTTCTTCTGTATAATAAAAGAGAACAAGCTTGCATTTCCATGAAAGAGAAGGATATTTATTATATATTTATTTATTATTATTATTATTTATTTATTTATTATTTTTTTTTTTTTGCAGTGGAAGAAATGAAAATAAGTCTTGTACACCAACCAGATCTCCTTTAGTTTCCAGAGAGAATAGCTGGAGAGGAAGGTGTGATTATTTTCATTTTTTCTTTTAGTTCAATTGGGGATTAGAGTTTCTAACTATAAACTTAGTGATTATTAACACATTAATAATCACGTTTGTACGCTAATTATGCTATTCTTGATTTGGCGAGGAAATTAGTATGTTTTTCATATTTTGGTAATATAAATCACTACAAATCAGGATCAAAGGCTTTGTATTTAATATCATTTATGCTTTTAAAACTTGTTTTTAGTACAATAAATGTGAGCATAAGAACTTGAAATTCCTATTTTAAGAAAATTAACGCGCATGCCATTTATTGCCGTCCT

mRNA sequence

TTTAAATTTTGAGTTGGATAATGGGGAATAGATTGTTCGAATTGTTGGATGATTTGAACCCGAATCGTTTCAATAATTTAATCCTATTCGTGATATGATGCGCATAAGATTAAAAAAATAATAAAAAAAATAAAAATAAATTCAAACAGTTGGGAGAGTAAATTTTGGTGAAGCTTACAGTTATCCGGTCGGATTAGTTCATCTGTCGTCGATTCTTCTTCATTGTCAAGCCGTCGCGTTTTCCCCACAATTCCATCATCTTTCACTATCTGCTACTTTTTAGCCATGGCGGACCAGTGGAAACACACTGCTCTTCTTGTTATCGACATGCAGAAAGATTTCTTTGACGAACAATCCGTCTTCGCTGTACCAGGAGCCAGCACCATAATTCCAAGCGTCTCCGATGCTGTCGAAATCGCAAGAAAGCGCGGCATGTTCATCGTTTGGGTTGTTCGAGAGCATGATCCTGAAGGACGAGATGTTGAACGCTTTCGCCGCCATCACTACGGCAGCGGGAAGTCGAATCCGGTGGCGAAGGGAAGCAAAGGGGCAGAATTAGTAGAAGGGCTTGAAGTGAAAGAAGGAGAATACAAATTGGTGAAAACAAGGTTCAGTGCCTTCTTTAATACTAATTTGCATTCTCTTCTACAAGGGCAGGGTATTACTGCTTTGGTTGTCTCAGGTGTTCAAACCCCAAACTGTATCAGACAGACTGTTTTTGATGCTGTATCTTTGGATTATCATTCTATCACTCTTCTTTATGATGCAACAGCAGCTGCGACTCCCAAAATTCATCATGATAATATCACTGACATGGAGAAAGTGGGTGTTGTGGTCATGAGAGTTGATAAATGGGGGAAGTCTGATTCTAATGTTTGAACCCAAGTCTTATACATCTTGGTGCTGCTGTGGAAGAAATGAAAATAAGTCTTGTACACCAACCAGATCTCCTTTAGTTTCCAGAGAGAATAGCTGGAGAGGAAGGTGTGATTATTTTCATTTTTTCTTTTAGTTCAATTGGGGATTAGAGTTTCTAACTATAAACTTAGTGATTATTAACACATTAATAATCACGTTTGTACGCTAATTATGCTATTCTTGATTTGGCGAGGAAATTAGTATGTTTTTCATATTTTGGTAATATAAATCACTACAAATCAGGATCAAAGGCTTTGTATTTAATATCATTTATGCTTTTAAAACTTGTTTTTAGTACAATAAATGTGAGCATAAGAACTTGAAATTCCTATTTTAAGAAAATTAACGCGCATGCCATTTATTGCCGTCCT

Coding sequence (CDS)

ATGGCGGACCAGTGGAAACACACTGCTCTTCTTGTTATCGACATGCAGAAAGATTTCTTTGACGAACAATCCGTCTTCGCTGTACCAGGAGCCAGCACCATAATTCCAAGCGTCTCCGATGCTGTCGAAATCGCAAGAAAGCGCGGCATGTTCATCGTTTGGGTTGTTCGAGAGCATGATCCTGAAGGACGAGATGTTGAACGCTTTCGCCGCCATCACTACGGCAGCGGGAAGTCGAATCCGGTGGCGAAGGGAAGCAAAGGGGCAGAATTAGTAGAAGGGCTTGAAGTGAAAGAAGGAGAATACAAATTGGTGAAAACAAGGTTCAGTGCCTTCTTTAATACTAATTTGCATTCTCTTCTACAAGGGCAGGGTATTACTGCTTTGGTTGTCTCAGGTGTTCAAACCCCAAACTGTATCAGACAGACTGTTTTTGATGCTGTATCTTTGGATTATCATTCTATCACTCTTCTTTATGATGCAACAGCAGCTGCGACTCCCAAAATTCATCATGATAATATCACTGACATGGAGAAAGTGGGTGTTGTGGTCATGAGAGTTGATAAATGGGGGAAGTCTGATTCTAATGTTTGA

Protein sequence

MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHDPEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSLLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKVGVVVMRVDKWGKSDSNV

Homology

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BLAST of Clc09G02050 vs. NCBI nr
Match: XP_038898995.1 (probable inactive nicotinamidase At3g16190 [Benincasa hispida])

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-91
Identity = 170/191 (89.01%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQ KHTALLVIDMQKDF DEQSVFAVPGA+TI+PSV + VEIAR RG+FIVWVVREHD
Sbjct: 1   MADQLKHTALLVIDMQKDFLDEQSVFAVPGATTILPSVINTVEIARNRGLFIVWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
           P+GRDVERFRRH+YGSGK NPV+KGSKGAELVEGLE+KEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  PQGRDVERFRRHYYGSGKPNPVSKGSKGAELVEGLEMKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVVSGVQTPNCIRQTVFDAV+LDYHSITLL DATAAATPKIHH NITDME V
Sbjct: 121 LQGMGITDLVVSGVQTPNCIRQTVFDAVALDYHSITLLSDATAAATPKIHHGNITDMENV 180

Query: 181 GVVVMRVDKWG 192
           GVVVMRVD+WG
Sbjct: 181 GVVVMRVDEWG 191

[Close]

BLAST of Clc09G02050 vs. NCBI nr
Match: XP_008465520.1 (PREDICTED: probable inactive nicotinamidase At3g16190 isoform X1 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 4.3e-90
Identity = 167/195 (85.64%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQWK TALLVIDMQ+DF DE SVFAVPGASTIIPSVS AVEIAR RG+FI+WVVREHD
Sbjct: 1   MADQWKRTALLVIDMQRDFIDEHSVFAVPGASTIIPSVSTAVEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP+ KGSKGAELV+GLE+KEGEYKLVKTRFSAFFNTNL SL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPLVKGSKGAELVQGLEIKEGEYKLVKTRFSAFFNTNLRSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTVFDAV+LDYHSITLLYDATAAATPK+HHDNITDM  V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKVHHDNITDMVNV 180

Query: 181 GVVVMRVDKWGKSDS 196
           GV V RVD+WG+SDS
Sbjct: 181 GVEVKRVDEWGESDS 195

[Close]

BLAST of Clc09G02050 vs. NCBI nr
Match: XP_004141764.1 (probable inactive nicotinamidase At3g16190 [Cucumis sativus] >KGN45388.1 hypothetical protein Csa_015610 [Cucumis sativus])

HSP 1 Score: 341.3 bits (874), Expect = 5.7e-90
Identity = 166/192 (86.46%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           M DQWK TALLVIDMQ DFFDE S FAVPGASTIIPSVS+A+EIAR RG+FI+WVVREHD
Sbjct: 1   MTDQWKRTALLVIDMQTDFFDEHSAFAVPGASTIIPSVSNAIEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP  KGSKGAELVEGLE+KEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPSVKGSKGAELVEGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTVFDAV+LDYHSITLLYDATAAATPKIHHDN TDME V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKIHHDNTTDMENV 180

Query: 181 GVVVMRVDKWGK 193
           GVVV RVD+WG+
Sbjct: 181 GVVVKRVDQWGE 192

[Close]

BLAST of Clc09G02050 vs. NCBI nr
Match: KAA0059313.1 (putative inactive nicotinamidase [Cucumis melo var. makuwa])

HSP 1 Score: 340.5 bits (872), Expect = 9.7e-90
Identity = 166/195 (85.13%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQWK TALLVIDMQ+DF DE SVFAVPGASTIIPSVS AVEIAR RG+FI+WVVREHD
Sbjct: 1   MADQWKRTALLVIDMQRDFIDEHSVFAVPGASTIIPSVSTAVEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP+ KGSKGAELV+GLE+KEGEYKLVKTRFSAFFNTNL SL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPLVKGSKGAELVQGLEIKEGEYKLVKTRFSAFFNTNLRSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTV+DAV+LDYHSITLLYDATAAATPK+HHDNITDM  V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVYDAVALDYHSITLLYDATAAATPKVHHDNITDMVNV 180

Query: 181 GVVVMRVDKWGKSDS 196
           GV V RVD+WG+SDS
Sbjct: 181 GVEVKRVDEWGESDS 195

[Close]

BLAST of Clc09G02050 vs. NCBI nr
Match: XP_022154038.1 (probable inactive nicotinamidase At3g16190 [Momordica charantia])

HSP 1 Score: 336.7 bits (862), Expect = 1.4e-88
Identity = 163/194 (84.02%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MA+QW HTALLVIDMQ+DFFDE+SV A+PGA  I+PSV DAVEIARKR M IVWVVREHD
Sbjct: 1   MANQWNHTALLVIDMQRDFFDERSVIAIPGAYAIVPSVVDAVEIARKRRMLIVWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
           PEGRDVERFRRH YGSGK NPVAKGS+GAELV+GLE+KEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  PEGRDVERFRRHFYGSGKQNPVAKGSRGAELVDGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQ +GI  LVV+GVQTPNCIRQTVFDAV+LDYHSITLL+DATAAATPK HHDNI DME V
Sbjct: 121 LQREGINNLVVAGVQTPNCIRQTVFDAVALDYHSITLLHDATAAATPKTHHDNIADMENV 180

Query: 181 GVVVMRVDKWGKSD 195
           GVV  RVD+WG+SD
Sbjct: 181 GVVAKRVDQWGESD 194

[Close]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot
Match: Q93Z51 (Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana OX=3702 GN=At3g16190 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 7.2e-64
Identity = 117/193 (60.62%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MA++W++TALLVIDMQ DF +E +V  V G  +I+P+V   VE+AR+RG+ ++WVVREHD
Sbjct: 1   MAERWRNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEV-KEGEYKLVKTRFSAFFNTNLHS 120
            +GRDVE FRRH+Y S K  PV KG+ GAELV+GL + +E +YK+VKTRFSAFF+TNLHS
Sbjct: 61  RQGRDVELFRRHNYSSEKVGPVIKGTVGAELVDGLMINEEDDYKIVKTRFSAFFSTNLHS 120

Query: 121 LLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEK 180
            LQ  G+T LV++GVQTPNCIRQTVFDAV+LDY ++T++ DATAAATP+IH  NI DM+ 
Sbjct: 121 FLQTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIHTANILDMKN 180

Query: 181 VGVVVMRVDKWGK 193
           +GV    + +W +
Sbjct: 181 IGVKTPTLHEWSE 193

[Close]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot
Match: B7NLB5 (Ureidoacrylate amidohydrolase RutB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) OX=585057 GN=rutB PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-14
Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 6   KHTALLVIDMQKDF-----FDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 65
           + TAL+V+DMQ  +     + + + F V     +I ++  AV  AR  GM I+W     D
Sbjct: 16  QQTALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWD 75

Query: 66  PE--------------GRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVK 125
            +                 ++  R+     GK   +AKGS   +LV+ L  + G+  L K
Sbjct: 76  AQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKL--LAKGSWDYQLVDELVPQPGDIVLPK 135

Query: 126 TRFSAFFNTNLHSLLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAAT 169
            R+S+FFNT L S+L+ +GI  LV +G+ T  C+  T+ D   L+Y  + +L DAT  A 
Sbjct: 136 PRYSSFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGV-VLEDATHQAG 194

[Close]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot
Match: D5VGV1 (Ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) OX=509190 GN=rutB PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 57/182 (31.32%), Postives = 93/182 (51.10%), Query Frame = 0


Query: 6   KHTALLVIDMQKDF-----FDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 65
           K TA++VIDMQ  +     + + + F + GA+ +I  +   +E+AR  GM +++     D
Sbjct: 27  KTTAVIVIDMQNAYASPGGYLDLAGFDISGAAKVIHEIKGVLEVARSAGMQVIYFQNGWD 86

Query: 66  PE--------------GRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVK 125
            +                 ++  R      GK   +A+G    ELV+ L+ + G+ +L K
Sbjct: 87  DQYVEAGGPGSPNWWKSNALKTMRAKPELQGKL--LARGQWDYELVDELKPQPGDIQLHK 146

Query: 126 TRFSAFFNTNLHSLLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAAT 169
           TR+S FFN+ L S+L+ +GI  LV  G+ T  C+  T+ D   L+Y   T+L DAT  A 
Sbjct: 147 TRYSGFFNSQLDSVLRARGIRHLVFVGIATNVCVESTLRDGFFLEYFG-TVLEDATHQAG 205

[Close]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot
Match: B7MTF4 (Ureidoacrylate amidohydrolase RutB OS=Escherichia coli O81 (strain ED1a) OX=585397 GN=rutB PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 58/182 (31.87%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 6   KHTALLVIDMQKDF-----FDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 65
           + TAL+V+DMQ  +     + + + F V     +I ++  AV  AR  GM I+W     D
Sbjct: 16  QQTALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWD 75

Query: 66  PE--------------GRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVK 125
            +                 ++  R+     GK   +AKGS   +LV+ L  + G+  L K
Sbjct: 76  EQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKL--LAKGSWDYQLVDELVPQPGDIVLPK 135

Query: 126 TRFSAFFNTNLHSLLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAAT 169
            R+S FFNT L S+L+ +GI  LV +G+ T  C+  T+ D   L+Y  + +L DAT  A 
Sbjct: 136 PRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGV-VLEDATHQAG 194

[Close]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot
Match: C4ZQD9 (Ureidoacrylate amidohydrolase RutB OS=Escherichia coli (strain K12 / MC4100 / BW2952) OX=595496 GN=rutB PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14
Identity = 58/182 (31.87%), Postives = 90/182 (49.45%), Query Frame = 0


Query: 6   KHTALLVIDMQKDF-----FDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 65
           + +AL+V+DMQ  +     + + + F V     +I ++  AV  AR  GM I+W     D
Sbjct: 16  QQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWD 75

Query: 66  PE--------------GRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVK 125
            +                 ++  R+     GK   +AKGS   +LV+ L  + G+  L K
Sbjct: 76  EQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKL--LAKGSWDYQLVDELVPQPGDIVLPK 135

Query: 126 TRFSAFFNTNLHSLLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAAT 169
            R+S FFNT L S+L+ +GI  LV +G+ T  C+  T+ D   L+Y  + +L DAT  A 
Sbjct: 136 PRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGV-VLEDATHQAG 194

[Close]

BLAST of Clc09G02050 vs. ExPASy TrEMBL
Match: A0A1S3CP26 (probable inactive nicotinamidase At3g16190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503139 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.1e-90
Identity = 167/195 (85.64%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQWK TALLVIDMQ+DF DE SVFAVPGASTIIPSVS AVEIAR RG+FI+WVVREHD
Sbjct: 1   MADQWKRTALLVIDMQRDFIDEHSVFAVPGASTIIPSVSTAVEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP+ KGSKGAELV+GLE+KEGEYKLVKTRFSAFFNTNL SL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPLVKGSKGAELVQGLEIKEGEYKLVKTRFSAFFNTNLRSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTVFDAV+LDYHSITLLYDATAAATPK+HHDNITDM  V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKVHHDNITDMVNV 180

Query: 181 GVVVMRVDKWGKSDS 196
           GV V RVD+WG+SDS
Sbjct: 181 GVEVKRVDEWGESDS 195

[Close]

BLAST of Clc09G02050 vs. ExPASy TrEMBL
Match: A0A0A0K7E5 (Isochorismatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G447030 PE=3 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.7e-90
Identity = 166/192 (86.46%), Postives = 176/192 (91.67%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           M DQWK TALLVIDMQ DFFDE S FAVPGASTIIPSVS+A+EIAR RG+FI+WVVREHD
Sbjct: 1   MTDQWKRTALLVIDMQTDFFDEHSAFAVPGASTIIPSVSNAIEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP  KGSKGAELVEGLE+KEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPSVKGSKGAELVEGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTVFDAV+LDYHSITLLYDATAAATPKIHHDN TDME V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVFDAVALDYHSITLLYDATAAATPKIHHDNTTDMENV 180

Query: 181 GVVVMRVDKWGK 193
           GVVV RVD+WG+
Sbjct: 181 GVVVKRVDQWGE 192

[Close]

BLAST of Clc09G02050 vs. ExPASy TrEMBL
Match: A0A5A7UTR3 (Putative inactive nicotinamidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00370 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.7e-90
Identity = 166/195 (85.13%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQWK TALLVIDMQ+DF DE SVFAVPGASTIIPSVS AVEIAR RG+FI+WVVREHD
Sbjct: 1   MADQWKRTALLVIDMQRDFIDEHSVFAVPGASTIIPSVSTAVEIARNRGLFIIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
            EGRDVERFRRH+YG+GK NP+ KGSKGAELV+GLE+KEGEYKLVKTRFSAFFNTNL SL
Sbjct: 61  GEGRDVERFRRHYYGNGKPNPLVKGSKGAELVQGLEIKEGEYKLVKTRFSAFFNTNLRSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV GVQTPNCIRQTV+DAV+LDYHSITLLYDATAAATPK+HHDNITDM  V
Sbjct: 121 LQGAGITDLVVCGVQTPNCIRQTVYDAVALDYHSITLLYDATAAATPKVHHDNITDMVNV 180

Query: 181 GVVVMRVDKWGKSDS 196
           GV V RVD+WG+SDS
Sbjct: 181 GVEVKRVDEWGESDS 195

[Close]

BLAST of Clc09G02050 vs. ExPASy TrEMBL
Match: A0A6J1DJ62 (probable inactive nicotinamidase At3g16190 OS=Momordica charantia OX=3673 GN=LOC111021389 PE=3 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 6.7e-89
Identity = 163/194 (84.02%), Postives = 177/194 (91.24%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MA+QW HTALLVIDMQ+DFFDE+SV A+PGA  I+PSV DAVEIARKR M IVWVVREHD
Sbjct: 1   MANQWNHTALLVIDMQRDFFDERSVIAIPGAYAIVPSVVDAVEIARKRRMLIVWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
           PEGRDVERFRRH YGSGK NPVAKGS+GAELV+GLE+KEGEYKLVKTRFSAFFNTNLHSL
Sbjct: 61  PEGRDVERFRRHFYGSGKQNPVAKGSRGAELVDGLEIKEGEYKLVKTRFSAFFNTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQ +GI  LVV+GVQTPNCIRQTVFDAV+LDYHSITLL+DATAAATPK HHDNI DME V
Sbjct: 121 LQREGINNLVVAGVQTPNCIRQTVFDAVALDYHSITLLHDATAAATPKTHHDNIADMENV 180

Query: 181 GVVVMRVDKWGKSD 195
           GVV  RVD+WG+SD
Sbjct: 181 GVVAKRVDQWGESD 194

[Close]

BLAST of Clc09G02050 vs. ExPASy TrEMBL
Match: A0A6J1GPU8 (probable inactive nicotinamidase At3g16190 OS=Cucurbita moschata OX=3662 GN=LOC111456377 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 6.3e-87
Identity = 160/195 (82.05%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MADQW HTALLVIDMQKDF DE S FA+PGA  I+PSV  AVEIARKRG+F++WVVREHD
Sbjct: 1   MADQWNHTALLVIDMQKDFIDEGSPFAIPGARAILPSVYRAVEIARKRGVFVIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEVKEGEYKLVKTRFSAFFNTNLHSL 120
           PEGRDVERFRRH+YG+GK  P AKGS+GAELVEGLE+KEGEYKLVKTRFSAFF+TNLHSL
Sbjct: 61  PEGRDVERFRRHYYGNGKLKPAAKGSRGAELVEGLEMKEGEYKLVKTRFSAFFDTNLHSL 120

Query: 121 LQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEKV 180
           LQG GIT LVV+GVQTPNCIRQTVFD VSLDYHSITLL DATAAATPKIH DNITDM+ V
Sbjct: 121 LQGMGITHLVVAGVQTPNCIRQTVFDGVSLDYHSITLLSDATAAATPKIHQDNITDMKNV 180

Query: 181 GVVVMRVDKWGKSDS 196
           GVV  +VD+WG SD+
Sbjct: 181 GVVASKVDEWGHSDA 195

[Close]

BLAST of Clc09G02050 vs. TAIR 10
Match: AT3G16190.1 (Isochorismatase family protein )

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-65
Identity = 117/193 (60.62%), Postives = 154/193 (79.79%), Query Frame = 0


Query: 1   MADQWKHTALLVIDMQKDFFDEQSVFAVPGASTIIPSVSDAVEIARKRGMFIVWVVREHD 60
           MA++W++TALLVIDMQ DF +E +V  V G  +I+P+V   VE+AR+RG+ ++WVVREHD
Sbjct: 1   MAERWRNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREHD 60

Query: 61  PEGRDVERFRRHHYGSGKSNPVAKGSKGAELVEGLEV-KEGEYKLVKTRFSAFFNTNLHS 120
            +GRDVE FRRH+Y S K  PV KG+ GAELV+GL + +E +YK+VKTRFSAFF+TNLHS
Sbjct: 61  RQGRDVELFRRHNYSSEKVGPVIKGTVGAELVDGLMINEEDDYKIVKTRFSAFFSTNLHS 120

Query: 121 LLQGQGITALVVSGVQTPNCIRQTVFDAVSLDYHSITLLYDATAAATPKIHHDNITDMEK 180
            LQ  G+T LV++GVQTPNCIRQTVFDAV+LDY ++T++ DATAAATP+IH  NI DM+ 
Sbjct: 121 FLQTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIHTANILDMKN 180

Query: 181 VGVVVMRVDKWGK 193
           +GV    + +W +
Sbjct: 181 IGVKTPTLHEWSE 193

The following BLAST results are available for this feature:

BLAST of Clc09G02050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898995.1	5.1e-91	89.01	probable inactive nicotinamidase At3g16190 [Benincasa hispida]	[more]
XP_008465520.1	4.3e-90	85.64	PREDICTED: probable inactive nicotinamidase At3g16190 isoform X1 [Cucumis melo]	[more]
XP_004141764.1	5.7e-90	86.46	probable inactive nicotinamidase At3g16190 [Cucumis sativus] >KGN45388.1 hypothe...	[more]
KAA0059313.1	9.7e-90	85.13	putative inactive nicotinamidase [Cucumis melo var. makuwa]	[more]
XP_022154038.1	1.4e-88	84.02	probable inactive nicotinamidase At3g16190 [Momordica charantia]	[more]

BLAST of Clc09G02050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Z51	7.2e-64	60.62	Probable inactive nicotinamidase At3g16190 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
B7NLB5	1.8e-14	31.87	Ureidoacrylate amidohydrolase RutB OS=Escherichia coli O7:K1 (strain IAI39 / ExP...	[more]
D5VGV1	2.4e-14	31.32	Ureidoacrylate amidohydrolase RutB OS=Caulobacter segnis (strain ATCC 21756 / DS...	[more]
B7MTF4	2.4e-14	31.87	Ureidoacrylate amidohydrolase RutB OS=Escherichia coli O81 (strain ED1a) OX=5853...	[more]
C4ZQD9	2.4e-14	31.87	Ureidoacrylate amidohydrolase RutB OS=Escherichia coli (strain K12 / MC4100 / BW...	[more]

BLAST of Clc09G02050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CP26	2.1e-90	85.64	probable inactive nicotinamidase At3g16190 isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0K7E5	2.7e-90	86.46	Isochorismatase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G44...	[more]
A0A5A7UTR3	4.7e-90	85.13	Putative inactive nicotinamidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A6J1DJ62	6.7e-89	84.02	probable inactive nicotinamidase At3g16190 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1GPU8	6.3e-87	82.05	probable inactive nicotinamidase At3g16190 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of Clc09G02050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16190.1	5.1e-65	60.62	Isochorismatase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000868	Isochorismatase-like	PFAM	PF00857	Isochorismatase	coord: 8..187 e-value: 4.0E-39 score: 134.6
IPR036380	Isochorismatase-like superfamily	GENE3D	3.40.50.850		coord: 2..195 e-value: 8.5E-53 score: 181.2
IPR036380	Isochorismatase-like superfamily	SUPERFAMILY	52499	Isochorismatase-like hydrolases	coord: 5..190
None	No IPR available	PANTHER	PTHR47044	OS02G0276400 PROTEIN	coord: 1..192
None	No IPR available	CDD	cd00431	cysteine_hydrolases	coord: 9..178 e-value: 7.11731E-43 score: 139.326

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G02050.1	Clc09G02050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane