Clc09G01960 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G01960
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptioncytochrome c oxidase assembly protein COX19-like
LocationClcChr09: 1621989 .. 1624835 (+)
RNA-Seq ExpressionClc09G01960
SyntenyClc09G01960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAAATTTGTCCCTTTCGTTTAAAGCAGCAGCATTTCACGCCGCTGCCCGCTGCAAAGCTTCCTCTGTGATCTTCCCGGCCGGTTTCAGGGTAGTTCATCTCGACCCACTAGTGTATCACCGGTGCCGGTCGTTCAAGCTAGTTTCGACTTGACGGTCCGTATGAGACGAATGAAAATTTCTTTTTCGAGCTATCGGGAGTTTCCACAATGAGTGCAGGTACTCTATGAATCCCGTGGGCAGGAGAGTGGGCATGATTTTTTTTTTTCTTCTTTCTTTTTTTGTGGTTGAATTTATGTTAGTTGAGGAATAGAGGGATTGGAATGGTTGAGCGAGTTAAGATTATCGATTGTTGTCGGTAAATTTATAAGGTCCGGATCAGGGATCGATTCTTTTAGGAGCTGGTGTTTTAGCCTTTTCTCGGAGCTCAAACTCATTTGGAAAATGAATAGATTTGAAGGTAGCTGCATACGCTGCAGAATCTCACCTCTAAATGGGGAGTTTCTATCAATTATTTAAATCCTGGTTTTGAGCAATTTGTTTGTAGGAGAGCTACAATGTGCTATTGCATAGTTTTAATTCCTGTGTGTTCTACCTATCAGATGGGTGGAACTTTGAAAATTAACACTTCGAAGTTAGGTGGGTTGATCGTGGTTTTTGAATTTTGTTTGTTTTACATGTCTACTAGTAGAACAGATTCTTCGATGTAAAAAGACTTGAATTATTTTCTTGATGACTAAGGGAAATGAATTGAGAGGGAGAATGCATGTTTTTTCTTCTTCTTTTTCTTTTTCGCGTACTATCAGTCGTGCAGAAAGTTGTCAGTTGCTTATACACGTTCACCAGGTTTTTAAGGTACACAAAAATGGCTGGTAACTATCATTCTGTTCATTCATTTCATTTTTAGTGGGGCTGTGAACTACTGCGATATACTTCCTTTTTTTAGTTTAACTTTGTATCTCAGGCAATGATTGTCATCATTCGCACTTACACCTTTATTTGAAGTTTTCTGATCTGTGAAAGAACTGTTTAAAAAATGATTGTTGCATGCAAGTTACGTTTACCTTTGTGAGTAATATGCATATTACTTGGAATTAGTGAACTCGGGAAGACTAGTTTGCTCATCTTCGGCATAGTCTTTCTTCTTTCAGTTTTACTGGATATTGGCAGTTAGTTGTCTCAGATGATACACAATTGGTACAGTAGAAGTTGAATCGATTTGTAAGGCAATCAATTAGAATGTGATTTGGATTGTAAATTCGGTGGATTGTGTTTTACCGTATTTGAAAAAATCATGATAACCATTTCTTATACTAAACATGGGTATTAAATGAAAATGGAGAAGTGAGATTCCAAATCTTGGAACAAGGAGTACGAACATTTCTAGTAATTATTCTATTCCTCACGTGATATGAATATGTTGAAGCACCCAACTCATTAGAGCCTGTGGTGACTTCCTTTGAGACTTGAACGGGAATGTCATGGCCATAGAATAGTCAAGGATGGTTTCTTAGAAACACTTGATTGAAGAAGAAATAGTCGCTGGCACTGCCTGGAGCCAATAATTTTTTGATTCACAAATTACAATTTTATAGACGTGCATTGAATGGATATATTTTCTTTTTCAGCTAATTTGATTTGGTGAGAGCTATTGTGATCTTTATGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCGGTGCCCCCAGAGAAAGGAGTCTTCCCTTTGGACCATATGCACCTCTGCGACCTGGTAACTTTTAGCAATATAGTCGTTACTAGGATATATGATTTTTGGGATATTTTCTCGAGGTATCTTTCTGTTCAAGTTCATTGCTTGTTTTATGATGCATGAACTTTATTACAGGAGAAGAAAGAATACCTCAATTGTCTCAAAACCTCTGGTCACCAATCTGAAAAGTGCAGGCACTTATCAAAAAAATACCTTGAATGCCGTATGGAGAAGTAAGACTCTTGACTTTTTATATGTATAACAAAAGTTGCTTGGCTTTCTCTAGATTCTTAAACTTTTGTTGCTGAGAACCTGGGTTATTTATTATAATTGTATTGGCCATCCTTCATTCCTTAAGTTTTACAGACCATGACTCCACTATTGGCTGAAATGGCGCTTTAATAAATATATAATAACAAACCTTCCCACCAAATACCAATTCTAGTAGAACAGAAGTGTTATTATTGTGATATACTGATATAATCTCAAGTTGCATTTTGATACTTTACGTGGCTCTAAGAAAAGAAAGTAGGTGCACGGTTAAGTATTTAAAAGCTTTTATCATCAGCAAATGAGTTTAGAATCAGTTGAAGTTAATACGATGCCCATCGATCCTGTTTCTTTGGAGATTTTTTTTCCCTTTTAATAGTGACGGTATGAACCAAATGGGTGGGTAACTGGAAATAGAGTGTATTCTTCATTTCTTTTCCTCTTATATTATGACAAATAAGGGGGACGCCACTCAGTGTGATATATCAAAATTATTTATTGAGCTACAATATCATAGTGTTGCACTGAGGGTTTTAACTCCTATCACCAAATGCCATGCAGATTGGTGGAAGTTTTTCTCTGCTACTTATCCAGTTTCTGATTCACCAACTTTGTTTCCTATTTTACATGGCTCAGCCGTATGAGTATGGTTATTAATGACATTTCATTGGAATCTTGCAGGAATTTAATGGCAAAGCAAGACATGACGGAGCTAGGATTTGGAAATTTGAGTCAGGCCAGTTTGTCTGGTGATAAATTGGATCAAGTCTAAATTGTTCTTCCATAAATAACCGTGATCGAAGTTTTTAGTTAGTCACAAGGTCAAGTTATCATTAACC

mRNA sequence

ATGCCAAATTTGTCCCTTTCGTTTAAAGCAGCAGCATTTCACGCCGCTGCCCGCTGCAAAGCTTCCTCTGTGATCTTCCCGGCCGGTTTCAGGTTTCGACTTGACGGTCCGTATGAGACGAATGAAAATTTCTTTTTCGAGCTATCGGGAGTTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCGGTGCCCCCAGAGAAAGGAGTCTTCCCTTTGGACCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTCAAAACCTCTGGTCACCAATCTGAAAAGTGCAGGCACTTATCAAAAAAATACCTTGAATGCCGTATGGAGAAGAATTTAATGGCAAAGCAAGACATGACGGAGCTAGGATTTGGAAATTTGAGTCAGGCCAGTTTGTCTGGTGATAAATTGGATCAAGTCTAAATTGTTCTTCCATAAATAACCGTGATCGAAGTTTTTAGTTAGTCACAAGGTCAAGTTATCATTAACC

Coding sequence (CDS)

ATGCCAAATTTGTCCCTTTCGTTTAAAGCAGCAGCATTTCACGCCGCTGCCCGCTGCAAAGCTTCCTCTGTGATCTTCCCGGCCGGTTTCAGGTTTCGACTTGACGGTCCGTATGAGACGAATGAAAATTTCTTTTTCGAGCTATCGGGAGTTTCCACAATGAGTGCAGGTGGTTCATTTGGAGGGAATAGAGGACTGAGACCGGTGCCCCCAGAGAAAGGAGTCTTCCCTTTGGACCATATGCACCTCTGCGACCTGGAGAAGAAAGAATACCTCAATTGTCTCAAAACCTCTGGTCACCAATCTGAAAAGTGCAGGCACTTATCAAAAAAATACCTTGAATGCCGTATGGAGAAGAATTTAATGGCAAAGCAAGACATGACGGAGCTAGGATTTGGAAATTTGAGTCAGGCCAGTTTGTCTGGTGATAAATTGGATCAAGTCTAA

Protein sequence

MPNLSLSFKAAAFHAAARCKASSVIFPAGFRFRLDGPYETNENFFFELSGVSTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV
Homology
[Close]
BLAST of Clc09G01960 vs. NCBI nr
Match: KAG6593473.1 (hypothetical protein SDJN03_12949, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-45
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           +CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Sbjct: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. NCBI nr
Match: XP_038899996.1 (cytochrome c oxidase assembly protein COX19-like [Benincasa hispida])

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-45
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYL+CLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLHCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           ECRMEKNLMAKQDMTELGFG LSQASLSGDKL+QV
Sbjct: 61  ECRMEKNLMAKQDMTELGFGYLSQASLSGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. NCBI nr
Match: XP_022964209.1 (cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata] >XP_023513825.1 cytochrome c oxidase assembly protein COX19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-45
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           +CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Sbjct: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. NCBI nr
Match: XP_004141761.1 (cytochrome c oxidase assembly protein COX19 [Cucumis sativus] >KAE8646473.1 hypothetical protein Csa_016084 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-45
Identity = 90/95 (94.74%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSK+YL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKRYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           ECRMEKNLMAKQDMTELGFGNLSQA+LSGDKL+Q+
Sbjct: 61  ECRMEKNLMAKQDMTELGFGNLSQANLSGDKLEQL 95

[Close]
BLAST of Clc09G01960 vs. NCBI nr
Match: KAG7025816.1 (COX19-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 2.4e-45
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           +CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Sbjct: 61  QCRMEKNLMAKQDMEELGFGNLSQPSLSGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match: A8E4L1 (Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15
Identity = 37/82 (45.12%), Postives = 58/82 (70.73%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MS   +F G++  +P PP+KG FPLDH   C   K++++ CL+ +  ++  CR+ SK+YL
Sbjct: 1   MSTAMNF-GSKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNL 136
           ECRME+ LMA++ + +LGFG+L
Sbjct: 61  ECRMERQLMAQEPLEKLGFGDL 81

[Close]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match: Q49B96 (Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-14
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MS   +F G +  +P PP+KG FPLDH+  C   K++++ CL  +  ++  CR  SK+YL
Sbjct: 1   MSTAMNF-GTKSFQPRPPDKGSFPLDHLGECKSFKEKFMKCLHNNNFENALCRKESKEYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDK 145
           ECRME+ LM ++ + +LGFG+L+       K
Sbjct: 61  ECRMERKLMLQEPLEKLGFGDLTSGKSEAKK 90

[Close]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match: O14056 (Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox19 PE=3 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 8.8e-14
Identity = 42/90 (46.67%), Postives = 51/90 (56.67%), Query Frame = 0 

Query: 59  SFGGNRGLRPV----PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLE 118
           SFG   G  P+    PPE+G FPLDH   C    K+YL C+K      E+CR L+KKYL+
Sbjct: 2   SFGAAGGSLPMTTREPPERGSFPLDHFGECTHVMKQYLECIKVKRENQEECRLLAKKYLQ 61

Query: 119 CRMEKNLMAKQDMTELGF---GNLSQASLS 142
           CRM+  L  K DM  LGF    N +  SLS
Sbjct: 62  CRMDTGLFGKDDMKNLGFHGDENATSTSLS 91

[Close]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match: P0CT19 (Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) OX=1143189 GN=COX19 PE=3 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13
Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 0 

Query: 54  MSA-GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCL-KTSGHQSEKCRHLSKK 113
           MSA GG  GG    +P+PP++G FPLDH   C      YL C+ K  G    +CR  +K 
Sbjct: 1   MSAFGGPGGGQINQKPIPPQRGSFPLDHDGECKHVMTSYLACMKKVRGVNDNECREFAKS 60

Query: 114 YLECRMEKNLMAKQDMTELGFGNLSQASLSGD 144
           YL CRM+ NLMA+ +   LGF ++  +S  GD
Sbjct: 61  YLACRMDHNLMARDEFKNLGFQDVKDSSNKGD 92

[Close]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match: Q4P821 (Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=COX19 PE=3 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.0e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 0 

Query: 70  PPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYLECRMEKNLMAKQDMTE 129
           PPE+G FPLDH   C    +EY+NC+K + + + KCRHLS+ YL+CRM+K LM + +M  
Sbjct: 16  PPERGSFPLDHDGECKSVMQEYMNCIKYNRNDNGKCRHLSRAYLQCRMDKGLMEQDNMDN 75

Query: 130 LGF 133
           LGF
Sbjct: 76  LGF 78

[Close]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match: A0A6J1HMG5 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464297 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 9.1e-46
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           +CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Sbjct: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match: A0A6J1KFT4 (cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494670 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.4e-45
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           +CRMEKNLMAKQDM ELGFGNLSQ SL GDKL+QV
Sbjct: 61  QCRMEKNLMAKQDMAELGFGNLSQPSLPGDKLEQV 95

[Close]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match: A0A5A7UTU4 (Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00460 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.4e-45
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           ECRMEKNLMAKQDMTELGFG++SQA+LSGDKL+Q+
Sbjct: 61  ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match: A0A1S3CGW0 (cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC103500603 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 3.4e-45
Identity = 89/95 (93.68%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGH+SEKCRHLSKKYL
Sbjct: 1   MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHKSEKCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           ECRMEKNLMAKQDMTELGFG++SQA+LSGDKL+Q+
Sbjct: 61  ECRMEKNLMAKQDMTELGFGSVSQANLSGDKLEQL 95

[Close]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match: A0A6J1HK56 (cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464297 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-44
Identity = 90/98 (91.84%), Postives = 92/98 (93.88%), Query Frame = 0 

Query: 51  VSTMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSK 110
           VS    GGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSK
Sbjct: 7   VSFSLQGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSK 66

Query: 111 KYLECRMEKNLMAKQDMTELGFGNLSQASLSGDKLDQV 149
           KYL+CRMEKNLMAKQDM ELGFGNLSQ SLSGDKL+QV
Sbjct: 67  KYLQCRMEKNLMAKQDMAELGFGNLSQPSLSGDKLEQV 104

[Close]
BLAST of Clc09G01960 vs. TAIR 10
Match: AT1G69750.1 (cytochrome c oxidase 19-2 )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1   MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDK 145
           +CRM KNLMAKQDM ELGF  + +   + DK
Sbjct: 61  QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]
BLAST of Clc09G01960 vs. TAIR 10
Match: AT1G66590.1 (cytochrome c oxidase 19-1 )

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 66/91 (72.53%), Postives = 77/91 (84.62%), Query Frame = 0 

Query: 54  MSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEKCRHLSKKYL 113
           MS GG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+CRHLSKKYL
Sbjct: 1   MSTGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQCRHLSKKYL 60

Query: 114 ECRMEKNLMAKQDMTELGFGNLSQASLSGDK 145
           +CRM KNLMAKQDM ELGF  + +   + DK
Sbjct: 61  QCRMAKNLMAKQDMAELGFSGVKELDSTEDK 91

[Close]
BLAST of Clc09G01960 vs. TAIR 10
Match: AT1G66590.2 (cytochrome c oxidase 19-1 )

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-36
Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = 0 

Query: 46  FELSGVS-TMSAGGSFGGNRGLRPVPPEKGVFPLDHMHLCDLEKKEYLNCLKTSGHQSEK 105
           F+L+  S +  AGG+FGGNRGLRP+PPEKG+FPLDH+H CD EKKEYL CLK+S H+SE+
Sbjct: 7   FDLNRYSCSWGAGGAFGGNRGLRPIPPEKGIFPLDHLHECDAEKKEYLGCLKSSAHKSEQ 66

Query: 106 CRHLSKKYLECRMEKNLMAKQDMTELGFGNLSQASLSGDK 145
           CRHLSKKYL+CRM KNLMAKQDM ELGF  + +   + DK
Sbjct: 67  CRHLSKKYLQCRMAKNLMAKQDMAELGFSGVKELDSTEDK 106

The following BLAST results are available for this feature:
BLAST of Clc09G01960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593473.11.9e-4595.79hypothetical protein SDJN03_12949, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038899996.11.9e-4596.84cytochrome c oxidase assembly protein COX19-like [Benincasa hispida][more]
XP_022964209.11.9e-4595.79cytochrome c oxidase assembly protein COX19-like isoform X2 [Cucurbita moschata]... [more]
XP_004141761.11.9e-4594.74cytochrome c oxidase assembly protein COX19 [Cucumis sativus] >KAE8646473.1 hypo... [more]
KAG7025816.12.4e-4595.79COX19-2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Clc09G01960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A8E4L16.1e-1545.12Cytochrome c oxidase assembly protein COX19 OS=Bos taurus OX=9913 GN=COX19 PE=3 ... [more]
Q49B964.0e-1440.66Cytochrome c oxidase assembly protein COX19 OS=Homo sapiens OX=9606 GN=COX19 PE=... [more]
O140568.8e-1446.67Cytochrome c oxidase assembly protein cox19, mitochondrial OS=Schizosaccharomyce... [more]
P0CT192.0e-1343.48Cytochrome c oxidase assembly protein COX19 OS=Magnaporthe oryzae (strain Y34) O... [more]
Q4P8212.0e-1352.38Cytochrome c oxidase assembly protein COX19 OS=Ustilago maydis (strain 521 / FGS... [more]
BLAST of Clc09G01960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HMG59.1e-4695.79cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita moschat... [more]
A0A6J1KFT43.4e-4594.74cytochrome c oxidase assembly protein COX19-like isoform X2 OS=Cucurbita maxima ... [more]
A0A5A7UTU43.4e-4593.68Cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo var. makuwa OX=... [more]
A0A1S3CGW03.4e-4593.68cytochrome c oxidase assembly protein COX19-like OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1HK561.3e-4491.84cytochrome c oxidase assembly protein COX19-like isoform X1 OS=Cucurbita moschat... [more]
BLAST of Clc09G01960 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G69750.11.7e-3672.53cytochrome c oxidase 19-2 [more]
AT1G66590.11.7e-3672.53cytochrome c oxidase 19-1 [more]
AT1G66590.22.9e-3668.00cytochrome c oxidase 19-1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010625CHCHPFAMPF06747CHCHcoord: 84..118
e-value: 5.8E-8
score: 32.7
NoneNo IPR availablePANTHERPTHR47565:SF4CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX19-LIKEcoord: 54..140
NoneNo IPR availablePANTHERPTHR47565CYTOCHROME C OXIDASE 19-1coord: 54..140
NoneNo IPR availablePROSITEPS51808CHCHcoord: 81..123
score: 13.774618

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G01960.2Clc09G01960.2mRNA