Clc09G01310 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAAAAAAAAAAAAGCCTTCCACGAAATTTCCTTGTCTGACTCTGTTTTGAAGGAAACCAAATGGCTGGTGAGAAACAGAAAAACGACGATCTGTATGCCGTTTTGGGGCTGAAGAAGGAATGCACTGAAGCCGAGCTTAAGAATGCGTATAAGAAATTGGCTCTGGTAATTTAATTAATTAGGGTTCCCATTCTTTAATCTCTCTATTTTTCTTTTTCTTCTAATTTAATGATTTTTCTTAAAACAATTTTCGTTCGATTCTTTGTTAGAGATGGCATCCGGATCGGTGTTCTGCTTCGGGAAATTCGAACTTCGTCGAAGAAGCTAAGAGGAAATTTCAAGCTATTCAGCAAGCCTATTCTGGTATTTTCACTTTTCCTTTTTCTTTTTTTCTATTCTAGGAATTTCGTAATTTACCAATTCCAACGATTTAAATAATTAGGCGTTTTAAATATTATTTTCACCTTCTCACTCTATTTAATTTCAATTCCAATTACTACTTTGATTTGTTTTTGTCTAATGTAGTTTTTTTTTATAGTTGATCGCTTTAGTAATGTTATTATTTTATTTTAAAATTTTTTTTATCACAATTTAGAGATGAAACTCACTCAATAATTTAAACTTGATGGTCCCTACAATTTACATTTAAATTTGAAATTATAGATAAGACAATGGATATTTTAACTTTAATTAATTAAACTAAAACTTTGGGGATCAAAATATGCCGAGGAATCAAGTTTAAAATAATATTATAAACTCAATAATAATAACTATTATTTATTTTCCGAGATTAGTGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTACTTTTGTAATTTCCTTGTTGCGAGGCGTTGGTTTGGTTTTTTACTGTGGTTAACATGGGTGTAGTTTTATCGGACGCGAACAAACGGCTGTTGTACGACGTTGGAGTTTATGACAGTGATGATGACGATGATAACGTAAGCTCCTCCACATGTTAACTACGGTGCTCCTTTGGTTTCTTTTTTTAAAATTTCGATTTTAATTTGATTTGTATTTGGTTAAGAAGTTTGAAATGAAAAATAAATAAATAAATAAATAAAAGATAGGAAAATTGTACGGTAGAAACTAATGAAGTGTTGTTTGGTTTTGGGGTTCCCCACGGAATTTTGGTCAGGGAATTGGTGGGGTTACCCCCAAATGTTAAGACTCTGTTTGGTTCACTTCATTTGCAGGGTATGGGAGACTTCTTGACCGAAATGGTTGCCATGATGGATCAAACTAAGCCTAACGTAAGTCCCTTCTCTTTTTCATTTAATATCTACAAGATTTCAACCACTAATTTCAAAAAAAAAAACACGAACAAAAGGAAAAATATATATATACCACTTGATGTCACTAAGATAGGTGTGGGTTGAGCTATGTTTTCTCTAACAGAAAGAAAAAAGAAAAAAAAAAAAGTTGTCTATTATGATAGTCTAAAAGACATTTTAACATATTTTTAGGGTTAAATAATTCAATTTCATCTTTTCCCTTTTTTCTACTTTGGATATTTATTATAACACCTCCTTAACTTAAGTTACCTCTAATTATTTTATAAAAAAAAAAAAAAGAAAAAATTGTCCTTGCAGTCGACAACACCTTTTTATTAACTTCAAGTACTTTTTTTTATAAAAGTTTTTTTTTTTTTTTTTCTTTTTGGTTCATGTGTTTTCTTTTTGGCTGACTTTTGTCTTTTTAAGAAAGTTAAAAGTTAGTTTATATAAGCATAACTTAACCAGTCTAAAATTTATACAGAATGAGAAAAAAAAAAAAAAAAAATAGAAAGTCAAAATGATGATTAGGAAAGGAGAGAGAGGAGTGAGAGAGAATCAAAATGGGCCGATGGTCCAACAAAAGTCGGCCCAGATTGTGGAGCGACTAACTTTTTAGTTAGGTGTCGTGTCATCAATCTCGTCACATGCGTGTTCAAATCCTAGGAAATCTTCCGGCGAGGGCCCCACAATGAGAAAAACGAACTAGTTCACCACAGAGATCCTCGTGGGGCCCACTTTTCTTTTTTTTCTTAATTTCTTTTTCTTTTTTCTGATTCTCTGCACTCGGGTGCACAGTTACAATGGAAATTGGAATTTGAATTGTGACCATTTTTATTGGGAAAATTAAAACGACAGGAAAACGGAGAAGAAAGCTTCGAGAAATTGCAAGAACTGTTCCAAGAAATGTTCAACGACGACATGGATGGTTTCGGACCAAATTCACCGACAAGTTATTTCTCGTCTTCGTCGTCCTCCTCGTCGTACTCCGAATGTTCGACTTCCAGCAACAAGCGAAATTCTTCGGATATGAACAACAACCTTAACTCATTCCAGGCTCACGTGCACAGCTTCTCCATGGGGGTTAGTACACACTACACAGTATACTACATTATTATTTTACTCCTAAATTTATTTTTTTTTAATTTTGGTTTAAATATCATTTTAGTTATTTTAGTTATGTACTTCCCACAACTTTCTATATTTTATAACAAAAATTTAAAATATAATATTAAACTTGTTTTCACTGGATAGTATCCATTAACTTAAAAGTTTTGGGTCCACAAATTGTCATATTAACCTTAAATAGACATTAAAATTTTGATTTTTTTTAAAAATTGTTTGTTTAAAAAAAAATATATATATATGTGTGTGTGTGTATCAAGGGAACTAAGAAACTTTACACAAACCCAAGTTGAATATAGGTTTATGGTGATTTTTTAGACTAAATTTGTGAATGGATAAAATTCAGAGAGGAGGGAAAGGAGGAGGAGAAGGGAGCAAAGGGAGGAATTGGCGGAGGAAACGGTAGAAGAAGAAAGGCAAAGGCAGACAACAGAGGAATTTGAGGAGGGACGACATGTCGTCTATCAAACGAACGACAATGAGAGGGTGATATCGGCATTATTGTCGTTCAGATTTTTCAGCGAAATAGTGCTGATGTTAATCAATTGGGGGCTGCCATTGCTCAAGCGAAAAAGGCAACAACATGGGCAGGGCAATGATAGATTATGACTTTTTTTTTCTTTTTTCCTTTTTCCCCGCAAACAACTATATTTCTTGTTTAGGTTAATAAATATTTATTATTATTATTATTA CAAAAAAAAAAAAAAAGCCTTCCACGAAATTTCCTTGTCTGACTCTGTTTTGAAGGAAACCAAATGGCTGGTGAGAAACAGAAAAACGACGATCTGTATGCCGTTTTGGGGCTGAAGAAGGAATGCACTGAAGCCGAGCTTAAGAATGCGTATAAGAAATTGGCTCTGAGATGGCATCCGGATCGGTGTTCTGCTTCGGGAAATTCGAACTTCGTCGAAGAAGCTAAGAGGAAATTTCAAGCTATTCAGCAAGCCTATTCTGTTTTATCGGACGCGAACAAACGGCTGTTGTACGACGTTGGAGTTTATGACAGTGATGATGACGATGATAACGGTATGGGAGACTTCTTGACCGAAATGGTTGCCATGATGGATCAAACTAAGCCTAACGAAAACGGAGAAGAAAGCTTCGAGAAATTGCAAGAACTGTTCCAAGAAATGTTCAACGACGACATGGATGGTTTCGGACCAAATTCACCGACAAGTTATTTCTCGTCTTCGTCGTCCTCCTCGTCGTACTCCGAATGTTCGACTTCCAGCAACAAGCGAAATTCTTCGGATATGAACAACAACCTTAACTCATTCCAGGCTCACGTGCACAGCTTCTCCATGGGGGTTAAGAGGAGGGAAAGGAGGAGGAGAAGGGAGCAAAGGGAGGAATTGGCGGAGGAAACGGTAGAAGAAGAAAGGCAAAGGCAGACAACAGAGGAATTTGAGGAGGGACGACATGTCGTCTATCAAACGAACGACAATGAGAGGGTGATATCGGCATTATTGTCGTTCAGATTTTTCAGCGAAATAGTGCTGATGTTAATCAATTGGGGGCTGCCATTGCTCAAGCGAAAAAGGCAACAACATGGGCAGGGCAATGATAGATTATGACTTTTTTTTTCTTTTTTCCTTTTTCCCCGCAAACAACTATATTTCTTGTTTAGGTTAATAAATATTTATTATTATTATTATTA ATGGCTGGTGAGAAACAGAAAAACGACGATCTGTATGCCGTTTTGGGGCTGAAGAAGGAATGCACTGAAGCCGAGCTTAAGAATGCGTATAAGAAATTGGCTCTGAGATGGCATCCGGATCGGTGTTCTGCTTCGGGAAATTCGAACTTCGTCGAAGAAGCTAAGAGGAAATTTCAAGCTATTCAGCAAGCCTATTCTGTTTTATCGGACGCGAACAAACGGCTGTTGTACGACGTTGGAGTTTATGACAGTGATGATGACGATGATAACGGTATGGGAGACTTCTTGACCGAAATGGTTGCCATGATGGATCAAACTAAGCCTAACGAAAACGGAGAAGAAAGCTTCGAGAAATTGCAAGAACTGTTCCAAGAAATGTTCAACGACGACATGGATGGTTTCGGACCAAATTCACCGACAAGTTATTTCTCGTCTTCGTCGTCCTCCTCGTCGTACTCCGAATGTTCGACTTCCAGCAACAAGCGAAATTCTTCGGATATGAACAACAACCTTAACTCATTCCAGGCTCACGTGCACAGCTTCTCCATGGGGGTTAAGAGGAGGGAAAGGAGGAGGAGAAGGGAGCAAAGGGAGGAATTGGCGGAGGAAACGGTAGAAGAAGAAAGGCAAAGGCAGACAACAGAGGAATTTGAGGAGGGACGACATGTCGTCTATCAAACGAACGACAATGAGAGGGTGATATCGGCATTATTGTCGTTCAGATTTTTCAGCGAAATAGTGCTGATGTTAATCAATTGGGGGCTGCCATTGCTCAAGCGAAAAAGGCAACAACATGGGCAGGGCAATGATAGATTATGA MAGEKQKNDDLYAVLGLKKECTEAELKNAYKKLALRWHPDRCSASGNSNFVEEAKRKFQAIQQAYSVLSDANKRLLYDVGVYDSDDDDDNGMGDFLTEMVAMMDQTKPNENGEESFEKLQELFQEMFNDDMDGFGPNSPTSYFSSSSSSSSYSECSTSSNKRNSSDMNNNLNSFQAHVHSFSMGVKRRERRRRREQREELAEETVEEERQRQTTEEFEEGRHVVYQTNDNERVISALLSFRFFSEIVLMLINWGLPLLKRKRQQHGQGNDRL Homology
BLAST of Clc09G01310 vs. NCBI nr
Match: XP_038898667.1 (dnaJ homolog subfamily B member 8-like isoform X1 [Benincasa hispida]) HSP 1 Score: 357.1 bits (915), Expect = 1.4e-94 Identity = 197/219 (89.95%), Postives = 205/219 (93.61%), Query Frame = 0
BLAST of Clc09G01310 vs. NCBI nr
Match: XP_038898668.1 (dnaJ homolog subfamily B member 6-like isoform X2 [Benincasa hispida]) HSP 1 Score: 340.9 bits (873), Expect = 1.0e-89 Identity = 180/185 (97.30%), Postives = 182/185 (98.38%), Query Frame = 0
BLAST of Clc09G01310 vs. NCBI nr
Match: XP_004141723.1 (dnaJ homolog subfamily B member 6 [Cucumis sativus] >KGN45458.1 hypothetical protein Csa_015622 [Cucumis sativus]) HSP 1 Score: 315.1 bits (806), Expect = 6.0e-82 Identity = 171/189 (90.48%), Postives = 178/189 (94.18%), Query Frame = 0
BLAST of Clc09G01310 vs. NCBI nr
Match: TYK03954.1 (dnaJ-like protein subfamily B member 6-like [Cucumis melo var. makuwa]) HSP 1 Score: 315.1 bits (806), Expect = 6.0e-82 Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of Clc09G01310 vs. NCBI nr
Match: XP_008462261.1 (PREDICTED: dnaJ homolog subfamily B member 6-like [Cucumis melo]) HSP 1 Score: 312.4 bits (799), Expect = 3.9e-81 Identity = 175/207 (84.54%), Postives = 182/207 (87.92%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy Swiss-Prot
Match: A5EYE5 (Chaperone protein DnaJ OS=Dichelobacter nodosus (strain VCS1703A) OX=246195 GN=dnaJ PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.9e-12 Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy Swiss-Prot
Match: A0A0P0VG31 (DnaJ protein P58IPK homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=P58A PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11 Identity = 44/97 (45.36%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy Swiss-Prot
Match: Q5JNB5 (DnaJ protein P58IPK homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=P58B PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.6e-11 Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy Swiss-Prot
Match: B2IBR5 (Chaperone protein DnaJ OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIMB 8712) OX=395963 GN=dnaJ PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy Swiss-Prot
Match: Q5F3Z5 (DnaJ homolog subfamily B member 6 OS=Gallus gallus OX=9031 GN=DNAJB6 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.4e-11 Identity = 33/69 (47.83%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy TrEMBL
Match: A0A5D3BY97 (DnaJ-like protein subfamily B member 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001510 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.9e-82 Identity = 171/202 (84.65%), Postives = 182/202 (90.10%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy TrEMBL
Match: A0A0A0K7N3 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448690 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 2.9e-82 Identity = 171/189 (90.48%), Postives = 178/189 (94.18%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy TrEMBL
Match: A0A1S3CGJ6 (dnaJ homolog subfamily B member 6-like OS=Cucumis melo OX=3656 GN=LOC103500662 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.9e-81 Identity = 175/207 (84.54%), Postives = 182/207 (87.92%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy TrEMBL
Match: A0A6J1DEM3 (dnaJ homolog subfamily B member 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111020332 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 5.9e-75 Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 0
BLAST of Clc09G01310 vs. ExPASy TrEMBL
Match: A0A6J1DFH3 (dnaJ homolog subfamily B member 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020332 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 1.3e-74 Identity = 159/193 (82.38%), Postives = 173/193 (89.64%), Query Frame = 0
BLAST of Clc09G01310 vs. TAIR 10
Match: AT3G14200.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 179.9 bits (455), Expect = 2.8e-45 Identity = 109/191 (57.07%), Postives = 139/191 (72.77%), Query Frame = 0
BLAST of Clc09G01310 vs. TAIR 10
Match: AT1G72416.4 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 139.8 bits (351), Expect = 3.2e-33 Identity = 84/166 (50.60%), Postives = 112/166 (67.47%), Query Frame = 0
BLAST of Clc09G01310 vs. TAIR 10
Match: AT1G72416.1 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 5.5e-33 Identity = 84/166 (50.60%), Postives = 111/166 (66.87%), Query Frame = 0
BLAST of Clc09G01310 vs. TAIR 10
Match: AT1G72416.3 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 139.0 bits (349), Expect = 5.5e-33 Identity = 84/166 (50.60%), Postives = 111/166 (66.87%), Query Frame = 0
BLAST of Clc09G01310 vs. TAIR 10
Match: AT1G72416.2 (Chaperone DnaJ-domain superfamily protein ) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32 Identity = 89/186 (47.85%), Postives = 119/186 (63.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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