Clc09G01280 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G01280
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Acyl carrier protein
Location	ClcChr09: 1063137 .. 1068225 (+)
RNA-Seq Expression	Clc09G01280
Synteny	Clc09G01280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGCCAAGAAAATGTTTATTTATTTCAAATCTCATCCACTAATTGATTGCAGGTTAACCTTAATTAATGTGAGTATCAGGGAGACTGTTTTGTCATATAAAGTCAGGGTATGATTTCTCCTGGTCCCTTCTGTTTTCATTTTTTTAATTATATTTTGTTTGAATTAATTGATGACAAGTGCATATCTGCAAATTCAGAATCTGGGTCTGACCACAATTTGGCATTTTTATCTATTAATTACCAAAAAAGAGAAGTGGGAAGGAACGGTCACTCATTCCAAATGGATTTACTTCATCATTTTCCTCTAATTAACAGTGTTTTTATATTGAGAAACTATTTCCCCTTCCTTCCAATATGAGGAAAACTAAAAGTAGATGATGATGAATTTAAATGGGTAAACAGACTTGACTGCCAATGACTAGGCTTTGAACATCTTGATCAAGTTAATTTATGAGAGAAAATGATAAATTAGGATACAGATAAGTAAACTAGTAGAGACTAACATTTCCAAAGATGAGAAAAATAGTTACCTAATTCTGCATCTCATCATCTAGTTGCTGCTATCGCTGTTACTGTTGTTGTTGTTGCTACAATGATGATTACCAGCAGCAACAACTCTTCTCCCATGTTTGAGCTGCGAGATTTCCAATTGAGTCTTCATAAAGAATTGCATTCTTTGCAATTCCAGATCCTTAGCAAATTTCATCCTCTGCTTCTCCATTTCTACCACTTGTTGCAGCTTCGAACTCTCTGCTTGTTCATACGCCTCACCAAATTTCAGAATTGCTTGTGTTAATTCACTCACAGCATTTTTCCATCCCTTTTCTCTCGATCCATTCCTTCCCTTCTCCGTCTTCCCCACCTGCCCCAAATTCGGATTCACCACCTCTTTCTGAACCCTTACATTTTTCCTCTGAAAATTTCCTTGCCGATAACTATCACTCGAAGTTGGGGATGTTTCTCTGTCGGAGCCCGAGGAATCGGAATCAGTAGTTCGAGGCCGTTTGTGGTACTGGATCTTCTGAGCTTTTGGCCCCTTTGGTTGTTGTTGATGACTGTGATTATGGTGAGCCTGATACGGAATTAACGATCGATTCACTACAGGAATTCCTAGAGGAACTTTCTGGTTCTGCTGCAGAGGCGGATTTACAGCGGTGGCTACACCGGCGCTAGAAGCAGAATTCTTCGAAGCCGGACCGATCAATTGATCCAATCTATCATAAAATGGCCACTTACTGGGGCCTCCACCAGCAGTAATCTTAGCCTTCTCAGTCTTATACTTCTTCTTGACCGTATCAATCCGATTCTTGCACTGAATATCAGTCCTTGGTATTTTCGTATAATCCTCTCTACTGCTCACAATATCAGCAACCTCTTTCCAATGCTTCTGCTTCAAATTCCCTCTACTCAGTTCCAAATACCTCTCTCCCCAAGCATCAATCAGCACAGACGTCGCGCCTTCGCTCCAGCAATCCTCTCTTCCGCCTCCGCCGCTTCCTCCGCCGCCGCCGCCCTTGGACTGCTGATTCGGCAGAGCCAAGGTTATCATGTTCTGAGAAGAAGGCGGAGGAGGAGGCGCCGCCGCAACCGTCACCGTAATCCGGCCGTTGGAAATCGGCGAAGCCGGAGATCCACTTCCCGGCGACGGATAGGACTGAATCTCATCGTCTTCCTTCATGGAATCCGGTCCAATCTTGAACAAAAAATCGCCGATGCGAAAATGTTACGCACCGATCTGGCAACTAGATGGAAAGAACGTGATGTTGGTTCACCGGCGCATGCGAATCGGTCCGGTGCCTTCATGAGCCGGAGAAATGCCGCGATCTGAAACGCAAAGGTCCGATCCGAGAGAGAGAAAAAAGGGTTAGGGTTAGGGTTTGGGGTTGACCGGCGAAAATGGTATAATTTCTGTAGAGAAAAATGGGAAGTTTAATTTGGTTGACGGAAAAAACAGGGAGAGGGGGAACTGACGGCGTCGGTGAGGGAGTAATTTGGGAAGGGGACACGTGGCAGGACATTCGAAAGGGATGGTTGACGTGGCGAAAGGTAATTGGTGGTGATTTGTACCGGGAGTTTTTGTAACCGGAGTGACCGTGATGACGCTGCCGGCATAGCCTCGGGTAGGTAGTCCATCGCTGTTTATATATATGCGGTACAATTTTAATTTACCTAAAACTCCAATAATGTCTGTTTAATTACCATTTTACCCTCTCTACCGGCTCACCGTCCCCGGAACAGAATAGACATACAATTTTTTTCGTTTTAACTTATCTTTTTCCTCCAAATTATTGCTATTCAAATTTATTTGTTTTGTTGTTGAGTTTGAGTTAATGCCTATTTTAGCCTCCATCTAGGCCGTTTCTACCTTCTAGTAATTATTCTGTTTTCCAAAATTTATCTCATAAACAAATTACCACTTTGGGAAAAAATACTAATGGAATATTTGTAGTTTTAATAAATTTTAAATTTTTCTTTTTTCGAAGTTGGTTAAATAATAATTATAATTTTCAAGTAAAGACTGTTAATAGATAACAATTTTTTAAAAAAAGTTCAACAATAAACAATAAACTAGCCGTTAAGACTATATTTAAGATTTATTAAAATTTAAGTAATAAAATTGAATAATTAAAAGTATATGGACTAAAATTGAACCAAAATATAAAGGTTAGCTTGCTATTTTTTATTATTATTTTAATTTCAGCATGAACACACTTGTAAGTTACACCTATGCACTTGTTTCATTACCTATTTATAAAAATATTTTTAAAGTTTAGTCAAAATCTTTAATATATATATATATATATATATATATATATATATATATATATACCCCTCTACATATATAGTTTTTTAAGAAAATAAGGCATAGTAACGTTGAAAATTATAAAGAACAATATTACCATTGGGACTTAGTTTTTGTTGTTATTATACTCATTATTCTTTTGAGTTTAGAGGTGGAAGTAGAAATTCAAATATGAGACCTCAAAAATTAATGATATATATCTAATCCAATTGAACTATATTAAGGTGACTTTTTTTTATAATCATTTAACAAATAGGTGATATGAGTTTGAGTAGAAACATTACCATACTTATCCATAACACATAAAAGTGTATTTACTAGGACAACAAAAAAAATCATCAATAAAGTGCAATATTTTAACGAGCGTATTTTCGAAAAATATAAAATACTTATAATTTTGTTAAAGTTCAATGTTTAAGCAAAAGGATTGAGAGGTCCGCTAAGAAGAGAGAACCATAGTGCCATCCGCCAAAATTGACAACCAAACAAAGCCTTCGTTATCATCGGATCTTTCTCAATTCATTTTATTTAATATATATATATATTTTAAAAATGACTTATTATTATTATTATTATTATAAATATCTCTCCCCCTCCCTCCCCTCTGTCTACTTCATTCCTCACTTTTTAAGCTTCCAATTCAAATCATTAAACACATAGCCTCCCCTCCCATCAATCTCATTTCCATCATGTCGTCCTTCGCTTCGTTGCCACTTCCCACAATGCTTCCCTGCAATTCTTTGACAAGAAATAATAGTAGCCTATCTGCAAGAGTAAGTCTCTTTATCAAAACTAAACACAAGTTTTCATTTTTAAAATTTGACGGGTGAAGATTTGAACATGTGATTGTATCTAGTAGAGTTATGATAAATAGTGAAAATTTATGTGATAAATGTTGTGAAGTTGAAATTGTGCAGGATTGTACTTTGTTTTGTGGGCAGATGCTGTTCCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCACTTCCCACATCCTTCAAATCAAAGATTTCTTGCTCCATTGTACCGTTCTAAAACTCAACTTTTATTTCTTAGCCTAAATTATACAAAGCATCCACGTATACATATCTACTGCTTTATGATGATTGTATTTGCCTGTCTTACTTTCTAAACTATCATTTTCACTTTTTAAACATCAAATCAAATTCTAAAAATAAAGACAAGTTTCATTTATTTTTTAGAACATATGTATGTATAAATAAATAAATAAATAAAAAGTTGAAAACAAAATAAAGAAATGAAGTAGATAGAGGAATGTAATAGGGACTACAAACTAGGACCCAAAACCTTCTAGAATCCATATGTGAACTTGGGATTGTAACTCATTACAAATCCTTTACATTTGAGCCTCCCAAACCGGCCCTACTTGTTTTTCATTGTATTAGTAACACATAATTAGAATTTTATGTCTTAAAAGTATGCCCACGATATTTGCAAAGTTTTCACTTTTAGGTCAGCGTATTGAAATGCAATCCCAATATTTTTAAGAAAATAATTGACCAAACAATAATTCAATAAACTTATTTTGAATTAATGAATCTAGGAACAAAATAATTGAATCCGGATAATTTACTAAACAAGTCCCTGCTTTTATTTTCTCCTTTTATATCGATGGAGAATCCATCCTAAAAATTCTAACTAAAAGATTAAAAAAAATGGGTTGGTTTTAATTAAGGGTGGAAATTAAGATGAGTGTGATGTAAAAAATGTGCAGGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTAGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTGAGTGAACTCAAAAATTTAAACCTAACAGCACACAATTACAAGACAACCTAAAACTATAAACCCATTACTAACATTAAAGGAACACTTACAGGTCGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCAGAGGGCATCTCTACCGTTCAAGACGCTGCTGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAGTTAAACCAAACAGCAACATATCTATTCATGCCTTCAAATCTCAATATTTTGAATTAGATCAGTTTGTTATGGTTTTGTGTTCATCTTTATTTCAAGTAAGTTGTAATTTGTGGCGCAAAACTGAGTCAAAGTGACATGAAAACCAAAGAAAGAAGAGTTGCAAATCTGAATGAAATAATACTATACATTATATATACATA

mRNA sequence

AAAAATGCCAAGAAAATGTTTATTTATTTCAAATCTCATCCACTAATTGATTGCAGGTTAACCTTAATTAATGTGAGTATCAGGGAGACTGTTTTGTCATATAAAGTCAGGGATTGTACTTTGTTTTGTGGGCAGATGCTGTTCCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCACTTCCCACATCCTTCAAATCAAAGATTTCTTGCTCCATTGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTAGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTCGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCAGAGGGCATCTCTACCGTTCAAGACGCTGCTGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAGTTAAACCAAACAGCAACATATCTATTCATGCCTTCAAATCTCAATATTTTGAATTAGATCAGTTTGTTATGGTTTTGTGTTCATCTTTATTTCAAGTAAGTTGTAATTTGTGGCGCAAAACTGAGTCAAAGTGACATGAAAACCAAAGAAAGAAGAGTTGCAAATCTGAATGAAATAATACTATACATTATATATACATA

Coding sequence (CDS)

ATGTTTATTTATTTCAAATCTCATCCACTAATTGATTGCAGGTTAACCTTAATTAATGTGAGTATCAGGGAGACTGTTTTGTCATATAAAGTCAGGGATTGTACTTTGTTTTGTGGGCAGATGCTGTTCCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCACTTCCCACATCCTTCAAATCAAAGATTTCTTGCTCCATTGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTAGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTCGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCAGAGGGCATCTCTACCGTTCAAGACGCTGCTGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAGTTAA

Protein sequence

MFIYFKSHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS

Homology

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BLAST of Clc09G01280 vs. NCBI nr
Match: KAE8646494.1 (hypothetical protein Csa_016687 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 6.4e-49
Identity = 115/152 (75.66%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 5   FKSHPLIDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPT 64
           F S PL        ++  + TVL    S   RD +LFCG+ +FP+MK+AKAAKGAS L  
Sbjct: 5   FASSPLPTTFTCTSSMRNKSTVLYSRNSLSARDGSLFCGERVFPSMKVAKAAKGASSLSK 64

Query: 65  SFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEK 124
           SF+SKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEE+
Sbjct: 65  SFRSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEER 124

Query: 125 FGVSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           FGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Sbjct: 125 FGVSIGEGGAEGISTVQDAADLIEKVKASSAS 156

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BLAST of Clc09G01280 vs. NCBI nr
Match: XP_038897463.1 (acyl carrier protein-like [Benincasa hispida])

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-47
Identity = 116/151 (76.82%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 5   FKSHPL---IDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTS 64
           F S PL   + C  +  N S    + S   RD TL CGQ LF NM++AKA+KGAS LPT 
Sbjct: 4   FVSLPLLTTLPCTPSTRNKSTILHLSSLSARDGTLLCGQRLFSNMRMAKASKGASALPT- 63

Query: 65  FKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKF 124
           FKS ISCS+AQPETL+VVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKF
Sbjct: 64  FKSNISCSLAQPETLQVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKF 123

Query: 125 GVSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           GVSIGEGGAEGISTVQDA DLIEKVKASSAS
Sbjct: 124 GVSIGEGGAEGISTVQDAVDLIEKVKASSAS 153

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BLAST of Clc09G01280 vs. NCBI nr
Match: XP_008462262.1 (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.0e-46
Identity = 115/155 (74.19%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 5   FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASP 64
           F S PL   + C  ++ N   + T L    +   +D +LF G+ +FP+MK+AKAAKGAS 
Sbjct: 5   FASSPLPMTLQCTSSMRN---KSTTLYLHNNLSAKDGSLFRGERVFPSMKMAKAAKGASL 64

Query: 65  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL 124
           L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL
Sbjct: 65  LSKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL 124

Query: 125 EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Sbjct: 125 EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 156

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BLAST of Clc09G01280 vs. NCBI nr
Match: KAA0059374.1 (acyl carrier protein 1 [Cucumis melo var. makuwa] >TYK03952.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 196.1 bits (497), Expect = 2.3e-46
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 32  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQ 91
           +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQ
Sbjct: 36  KDGSLFRGERVFPSMKMAKAAKGASLLSKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQ 95

Query: 92  SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA 151
           SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA
Sbjct: 96  SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA 155

Query: 152 S 153
           S
Sbjct: 156 S 156

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BLAST of Clc09G01280 vs. NCBI nr
Match: XP_023514490.1 (acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.9 bits (468), Expect = 5.2e-43
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 0


Query: 35  TLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAV 94
           +LFC Q +FP++++AK A+G   LPT FKS ISCS+AQPET++VVQEIIAKQLSLEQSAV
Sbjct: 36  SLFCEQRVFPSIQMAKPARGLYQLPTYFKSNISCSLAQPETMQVVQEIIAKQLSLEQSAV 95

Query: 95  IPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           IPQTKFS+LGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK SSAS
Sbjct: 96  IPQTKFSELGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 153

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BLAST of Clc09G01280 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17
Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = 0


Query: 53  KGASPLPTSFKSK--ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLD 112
           KG S  P   +S   + C  A+PET+E V  I+ KQL+L + SAV  ++KF+ LGADSLD
Sbjct: 34  KGKSFAPLRMRSARFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLD 93

Query: 113 TVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 147
           TVEI+M LEE+FG+++ E  A+ I+TVQDAADLIEK+
Sbjct: 94  TVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKL 130

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BLAST of Clc09G01280 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 3.9e-17
Identity = 57/117 (48.72%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 31  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL- 90
           +R  +L   +  FP++K +K         +SF  ++SC  A+PET+  V  I+ KQL+L 
Sbjct: 28  LRSVSLPVSRKSFPSLKSSK---------SSFALRVSCQ-AKPETVAKVCGIVKKQLALP 87

Query: 91  EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 147
           + S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 88  DDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKL 134

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BLAST of Clc09G01280 vs. ExPASy Swiss-Prot
Match: P07088 (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris OX=3711 GN=Acl1.1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.3e-16
Identity = 49/90 (54.44%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 58  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMA 117
           +PT F   ISC+ A+PET+E V +I+ KQLSL +   V+ +TKF+DLGADSLDTVEI+M 
Sbjct: 43  IPTRF--SISCA-AKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMG 102

Query: 118 LEEKFGVSIGEGGAEGISTVQDAADLIEKV 147
           LEE+F + + E  A+ I+TV++AA+LIE++
Sbjct: 103 LEEEFDIEMAEEKAQKIATVEEAAELIEEL 129

[Close]

BLAST of Clc09G01280 vs. ExPASy Swiss-Prot
Match: P52412 (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-16
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 61  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEE 120
           SF  +++C  A+PET+  V  I+ KQL+L + S V   +KFS LGADSLDTVEI+M LEE
Sbjct: 46  SFSLRVNCQ-AKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEE 105

Query: 121 KFGVSIGEGGAEGISTVQDAADLIEKV 147
           +FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 106 EFGISVEEESAQSIQTVQDAADLIEKL 131

[Close]

BLAST of Clc09G01280 vs. ExPASy Swiss-Prot
Match: P52413 (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.3e-16
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 0


Query: 31  VRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL- 90
           +R  +L     +FP+++ ++        P SF+    C  A+ ET+  V EI+ KQL+L 
Sbjct: 32  LRSVSLPISGKIFPSLRSSRG-------PLSFR---VCCQAKQETVTRVCEIVKKQLALP 91

Query: 91  EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 147
           E S V   +KFS LGADSLDTVEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 92  EDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKL 138

[Close]

BLAST of Clc09G01280 vs. ExPASy TrEMBL
Match: A0A0A0K6W2 (Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G448710 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.2e-48
Identity = 108/125 (86.40%), Postives = 116/125 (92.80%), Query Frame = 0


Query: 28  SYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQL 87
           S   RD +LFCG+ +FP+MK+AKAAKGAS L  SF+SKI CS+AQPETLEVVQEIIAKQL
Sbjct: 13  SLSARDGSLFCGERVFPSMKVAKAAKGASSLSKSFRSKICCSVAQPETLEVVQEIIAKQL 72

Query: 88  SLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVK 147
           SLEQSAVIPQTKFSDLGADSLDTVEIMMALEE+FGVSIGEGGAEGISTVQDAADLIEKVK
Sbjct: 73  SLEQSAVIPQTKFSDLGADSLDTVEIMMALEERFGVSIGEGGAEGISTVQDAADLIEKVK 132

Query: 148 ASSAS 153
           ASSAS
Sbjct: 133 ASSAS 137

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BLAST of Clc09G01280 vs. ExPASy TrEMBL
Match: A0A1S3CGK8 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.9e-47
Identity = 115/155 (74.19%), Postives = 127/155 (81.94%), Query Frame = 0


Query: 5   FKSHPL---IDCRLTLINVSIRETVL----SYKVRDCTLFCGQMLFPNMKIAKAAKGASP 64
           F S PL   + C  ++ N   + T L    +   +D +LF G+ +FP+MK+AKAAKGAS 
Sbjct: 5   FASSPLPMTLQCTSSMRN---KSTTLYLHNNLSAKDGSLFRGERVFPSMKMAKAAKGASL 64

Query: 65  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL 124
           L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL
Sbjct: 65  LSKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMAL 124

Query: 125 EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS
Sbjct: 125 EEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 156

[Close]

BLAST of Clc09G01280 vs. ExPASy TrEMBL
Match: A0A5A7UWB3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001490 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 107/121 (88.43%), Postives = 114/121 (94.21%), Query Frame = 0


Query: 32  RDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSLEQ 91
           +D +LF G+ +FP+MK+AKAAKGAS L  SFKSKI CS+AQPETLEVVQEIIAKQLSLEQ
Sbjct: 36  KDGSLFRGERVFPSMKMAKAAKGASLLSKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQ 95

Query: 92  SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA 151
           SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA
Sbjct: 96  SAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA 155

Query: 152 S 153
           S
Sbjct: 156 S 156

[Close]

BLAST of Clc09G01280 vs. ExPASy TrEMBL
Match: A0A6J1HII2 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.4e-41
Identity = 102/146 (69.86%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 7   SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKI 66
           S PL+    TL + ++  +  +++ R+ +LF  + +FP+++ AKAA+G   LPT FKS I
Sbjct: 6   SSPLL---TTLASTTLTSSCTAWRSRN-SLF-ARRVFPSIRRAKAARGLYQLPTYFKSNI 65

Query: 67  SCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVSIG 126
           SCS+AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGADSLDTVEIMMALEEKFGVSIG
Sbjct: 66  SCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTVEIMMALEEKFGVSIG 125

Query: 127 EGGAEGISTVQDAADLIEKVKASSAS 153
           EGGAEGISTVQDAADLIEKVK SSAS
Sbjct: 126 EGGAEGISTVQDAADLIEKVKTSSAS 146

[Close]

BLAST of Clc09G01280 vs. ExPASy TrEMBL
Match: A0A6J1HKE0 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.3e-39
Identity = 102/150 (68.00%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 7   SHPLIDCRLTLINVSIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPTSFKSKI 66
           S PL+    TL + ++  +  +++ R+ +LF  + +FP+++ AKAA+G   LPT FKS I
Sbjct: 6   SSPLL---TTLASTTLTSSCTAWRSRN-SLF-ARRVFPSIRRAKAARGLYQLPTYFKSNI 65

Query: 67  SCSIAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIMMALEEKFG 126
           SCS+AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGADSLDT    VEIMMALEEKFG
Sbjct: 66  SCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTEYSQVEIMMALEEKFG 125

Query: 127 VSIGEGGAEGISTVQDAADLIEKVKASSAS 153
           VSIGEGGAEGISTVQDAADLIEKVK SSAS
Sbjct: 126 VSIGEGGAEGISTVQDAADLIEKVKTSSAS 150

[Close]

BLAST of Clc09G01280 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 55/126 (43.65%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 21  SIRETVLSYKVRDCTLFCGQMLFPNMKIAKAAKGASPLPT-SFKSKISCSIAQPETLEVV 80
           S+  T LS+K    T+   Q+L           G     T S + +ISC+ A+ ET++ V
Sbjct: 3   SLSTTSLSFKAPSTTI--SQVLRKASSSQSVTFGRFTSSTKSLRLQISCA-AKAETVQKV 62

Query: 81  QEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQD 140
            +I+ +QL+L     +  ++KFS LGADSLDTVEI+MALEEKF +S+ E  A+ I+T+Q+
Sbjct: 63  SDIVKEQLALAADVPLTAESKFSALGADSLDTVEIVMALEEKFNISVEESDAQNITTIQE 122

Query: 141 AADLIE 145
           AADLIE
Sbjct: 123 AADLIE 125

[Close]

BLAST of Clc09G01280 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 46/82 (56.10%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 66  ISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEEKFGVS 125
           +SC++ Q ET+E V EI+ KQLSL +   V   TKF++LGADSLDTVEI+M LEE+FG++
Sbjct: 53  VSCAVKQ-ETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDTVEIVMGLEEEFGIT 112

Query: 126 IGEGGAEGISTVQDAADLIEKV 147
           + E  A+ I+TVQ AA+LIE++
Sbjct: 113 MAEERAKEIATVQQAAELIEEL 133

[Close]

BLAST of Clc09G01280 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 0


Query: 61  SFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMALEE 120
           S +  +SC+ A+ ET+E V  I+ KQLSL     V+ +TKF+DLGADSLDTVEI+M LEE
Sbjct: 47  SRRLSVSCA-AKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTVEIVMGLEE 106

Query: 121 KFGVSIGEGGAEGISTVQDAADLIEKV 147
           +F + + E  A+ I+TV+ AA+LIE++
Sbjct: 107 EFNIQMAEEKAQKIATVEQAAELIEEL 132

[Close]

BLAST of Clc09G01280 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 43  FPNMKIAKAAKGASPLPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFS 102
           F N + +  +     LPT  +  +SC+ A+PET++ V  ++ KQLSL E   +   TKF+
Sbjct: 29  FSNGRRSSLSFNLRQLPT--RLTVSCA-AKPETVDKVCAVVRKQLSLKEADEITAATKFA 88

Query: 103 DLGADSLDTVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 147
            LGADSLDTVEI+M LEE+FG+ + E  A+ I+TV+ AA LIE++
Sbjct: 89  ALGADSLDTVEIVMGLEEEFGIEMAEEKAQSIATVEQAAALIEEL 130

[Close]

BLAST of Clc09G01280 vs. TAIR 10
Match: AT1G54630.1 (acyl carrier protein 3 )

HSP 1 Score: 73.2 bits (178), Expect = 2.1e-13
Identity = 46/95 (48.42%), Postives = 65/95 (68.42%), Query Frame = 0


Query: 58  LPTSFKSKISCSIAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTVEIMMA 117
           LPT  +  + C+ A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDTVEI+M 
Sbjct: 44  LPT--RLTVYCA-AKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMG 103

Query: 118 LEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA 152
           LEE+FG+ + E  A+ I+TV+ AA LIE++    A
Sbjct: 104 LEEEFGIEMAEEKAQSIATVEQAAALIEELLLEKA 135

The following BLAST results are available for this feature:

BLAST of Clc09G01280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646494.1	6.4e-49	75.66	hypothetical protein Csa_016687 [Cucumis sativus]	[more]
XP_038897463.1	1.6e-47	76.82	acyl carrier protein-like [Benincasa hispida]	[more]
XP_008462262.1	1.0e-46	74.19	PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo]	[more]
KAA0059374.1	2.3e-46	88.43	acyl carrier protein 1 [Cucumis melo var. makuwa] >TYK03952.1 acyl carrier prote...	[more]
XP_023514490.1	5.2e-43	83.05	acyl carrier protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc09G01280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93092	1.0e-17	54.64	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52411	3.9e-17	48.72	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P07088	3.3e-16	54.44	Acyl carrier protein SF2, chloroplastic OS=Brassica campestris OX=3711 GN=Acl1.1...	[more]
P52412	4.3e-16	57.47	Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.2 PE=...	[more]
P52413	4.3e-16	47.86	Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.3 PE=...	[more]

BLAST of Clc09G01280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6W2	1.2e-48	86.40	Acyl carrier protein OS=Cucumis sativus OX=3659 GN=Csa_7G448710 PE=3 SV=1	[more]
A0A1S3CGK8	4.9e-47	74.19	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1	[more]
A0A5A7UWB3	1.1e-46	88.43	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347...	[more]
A0A6J1HII2	2.4e-41	69.86	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1	[more]
A0A6J1HKE0	1.3e-39	68.00	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1	[more]

BLAST of Clc09G01280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25050.1	5.8e-16	43.65	acyl carrier protein 4	[more]
AT5G27200.1	5.8e-16	56.10	acyl carrier protein 5	[more]
AT3G05020.1	3.8e-15	51.72	acyl carrier protein 1	[more]
AT1G54580.1	1.9e-14	45.71	acyl carrier protein 2	[more]
AT1G54630.1	2.1e-13	48.42	acyl carrier protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 69..147 e-value: 7.7E-24 score: 85.8
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 72..146
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 78..143 e-value: 2.2E-12 score: 47.1
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 73..147 score: 20.184206
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 74..145 e-value: 1.6E-24 score: 83.6
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 74..147 score: 17.471636
None	No IPR available	PANTHER	PTHR46153:SF2	ACYL CARRIER PROTEIN	coord: 39..150
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 39..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G01280.1	Clc09G01280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
molecular_function	GO:0000036	acyl carrier activity