Clc09G00630 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGGTACCATTCCAAAACTCATAACCCATTTCCCCAATTCTTCATTTCTTCGAAGTTTAGTTGAAAAATGGTTGCTACAAGAAGCGATCCGATTCAATAATTCATTTCAATTATTGAGGTTCTATTATATAATGTATGATCAATCGGCTTTTCGCTTTTTTTCCGTCTGCAAACAGCCCAGGTCAAACAATTTCAAGAACAGCACAAAGTCAGAGACGCTTCTTCTTCTTCACCGGCGCCACCAGCATCATCGAACATGGCATCCCCGTCTTCTTCTCCTTCAGCGCCGCAGCCTCCGAAGGAATCATTTGCTAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTCGGAGGTGATTTTCCTCTCCCTATGATGTGTTTATTAGTTTCTGGTTGTTGTGTTAATGTGTTTGGTCCAGAGCGGTAAATGTCAAAACGGATAATTGGGTTTTTTGATTTTATTGTGGTTACTCGGTTGTTCATGGAGTTTTTGTATTTAGGACTGGTACTCTCTACTGAAATTTATGGTGGAACAGTTTCTTTTGATTGTTATATCCCGTTCTCCTTTCTGGTACTTGTAAATTTGGATCTCCCAACTAAGCCATGTAGATATCTCTGTTCGGAGGAATTCTGTATGGTTTGTTGTTTTGCCATTACCGTCAGATAGAGTTGGGAATGAACAGTTTCATGTGTGATTCTAGAATATATGTAAGCATGAAATAACTCGAGATCCATCAGAAACTAAAACCGAGTGTTTTCAATAATTTGTTTGCTGATTTTGTTGAATACTCTATTCAATTGAAGTATGGTCTGCTATGACAATTGACAAATTAGCACAATAGTACTTTTCAGGTGTATTGGTTAATCTAAACCGTGTCATGGAACCATAAATGGGTTAATTAGAGTTGCTTTTTTGGTTGAACTTGATATATATTGGTGAGTGTAAAGAGGTTGGTATTGGGGTTGTCTTCAATCCAGCAATCTTTTTATCTTCCAGTAGCGCAAATAAAGCCACATTCATTGTCAATGTCCTTATCTAGCTTTTGGACAGAGGGAAAGGCAATAACCAAATGTAGGGTCTTTAGATGGGGAGGGATGATTTGATCTCATATTACCAATGACACTATCTTTTCTTTCCCTAGGAAGGCAAGGCGTCTTTGTTGATCTCTCGAAAAGAAAACCCTTAGAGAACCATTCTTATAGTTTTCTATCCAACATTTTGCCTTAGAATCCCAAGAGATAAGAGCTCTATCCATGGTGTCAATCATCTTTATAGTAAACACTTCAGGTGGGCTATTATGATTTGTTTTCATCCCTCTCCAGCAATTATATAATCTGGTATTAGACTAAAAATTGAAAGTTTAGACATCAATTAGGCTCTATTTAAAGTCAAGGAATTTATTATACTTAAAATGGATAGTTTCAGGATCTATTAGACATTTTTGAAATTTAGGAATCTATTAGAGGCAAATTATGAAAATCTGGGGACTGGACTTGTAATTTAACCTTAAATTATTGATTAATAATTAAAACCAAAACATTAAAAACCAGATTTTTATTAAGAACATGAAAGGATAGACCGGGCAATACAAGAAAAACAATCCAAACCATGTGGAGTCAAAATAAAAGGCATAGACGAGATCCTTTTAAACAGCAGAACTAAAAGTTTCCTCCAACCTCTTCATAATGAGATAATTTTCTTGCCAAAAGGCCGAACAGTAGACTGCCTAAAAGGCTCTAGTACGGAGTTTTTCATGTCCTTCCTCCTCCAGCTCTTTTTTCAACAAATCTAATAGCATGATAGGTTCCATTCTTCATCTTTTTAATTTCTTTTCGTGATATGCCAACTCCCACAAAAAGAAGCCAATATTGTATTTACAATTCATTTATACCCCTATCATCCCACACAAACTTCGGTACATTTCAGCCAGAGGAAGTTCATCTCTTGCCCAAACATCCGCCCAAAAGTTGAATCGATCTACCATTACCCATTTCAATCTTTGAATTACTTAGTAAGCATTCTTCATTTTTTTGCAATATGGCAAGAGAATGCTGGGCATGGCAGTATATTTGTTTGACATTAGTTGGTGTTTTCCTCTGTCATGAGGAGATGGTGATTCAACCATTAGAGAGTCCTAGCCTAAGAGGTTACGAGCATTTTGTGGAACGATGTAGTGCATGCAATCCTTTGGAGGTTATGGCTTGAAAGGGACCAAAGGATGTTCCAAGGGACGGAGTTGAGCAGGGACAACCTATGTGACAGCATTAAGTTTTATCCTCCCTTTTGGTGGATCCATAACAATTTTTTCTTTTGTAACTATGATCTTTTGCAAATTATTGCCAATTGGGAAGCCTTTTTGTAATCCCCTGGCTCTTTTGGAGATATCTCATCTCCCATCTTTTGTATATGCCCTTTTGATCTAATAAATTCTCAGTTTAATTTTAAAAAATATAAGGGAAAAAAAAAAGGAGAAAAGAAACAATATTTTTCATTTCTAAAATATTCCTCCATAAACTTCTCCATCTCCCCTACTCATTTGAAAAGTGAAGCAATATTCCTCATTCCTTCCGCATATTTACTGCAAAAGACCTTGTGCCAAAACTGATCTAACTCATATTTTTGTATAATTATATCTTTTATTGTCTTAGGTTTTCTTGTCTCTCAACATGGTCCTGAGTCCTTACATACATACATGCACAAATTTTGAAAAGTTTATATCCACTCTTGCCAATACAAATAAGGTTTTAGACGACATGAGAATTGAATAATAGTCCTCCTTAGACATAATTTAGCGTCTTAAGTTAGATATTATGATATCCACGTATTAATACTTGGTAGTCATGTTTTTCTTCTCATTTCCCTTTGAGGATGACAAACATTTGTTATCACAAAAGCCCTTACCTAAAGGAGCCAAGCTCCGCTATTTTCTCCTCCACCAGCTGTAGGTTGAGTGCCCTTCGCAAGGAAATATAGAATAGCAAAAACATTCTATTAGGTTTTTGATTCACCTTTTTTGTGGTTTGGAGGGTTGGGGGATGGAAATTTATTATCTTGCAATTGTTTGGATTCAGTAGTTGTCATTGTTTTAGGAACATTTACTTGCTTTTGCATGAACTGAGATAACTCTTTTAACTGCGTAGCTTATCTGTTTATGAGAACAAAGAAGCAAGATGAACATGTAGCTGATGAAGAAGCTGCCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCAAAGGATCGTGAAGAGAAGAAACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATCCCTAATTTTTAA ATGAGCGAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGCCCAGGTCAAACAATTTCAAGAACAGCACAAAGTCAGAGACGCTTCTTCTTCTTCACCGGCGCCACCAGCATCATCGAACATGGCATCCCCGTCTTCTTCTCCTTCAGCGCCGCAGCCTCCGAAGGAATCATTTGCTAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTCGGAGCTTATCTGTTTATGAGAACAAAGAAGCAAGATGAACATGTAGCTGATGAAGAAGCTGCCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCAAAGGATCGTGAAGAGAAGAAACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATCCCTAATTTTTAA ATGAGCGAAGAAGAACCTCCCAAGCTCTACGCCAACAAACCCAAGAAAGCCCAGGTCAAACAATTTCAAGAACAGCACAAAGTCAGAGACGCTTCTTCTTCTTCACCGGCGCCACCAGCATCATCGAACATGGCATCCCCGTCTTCTTCTCCTTCAGCGCCGCAGCCTCCGAAGGAATCATTTGCTAGGCGATATAAGTTCTTATGGCCCATGCTTTTGACTGTCAACCTTGCTGTCGGAGCTTATCTGTTTATGAGAACAAAGAAGCAAGATGAACATGTAGCTGATGAAGAAGCTGCCCCGGATTCAGCCAAAATCACCAAGATTGCTGCTCCTGTTGTTGAGGAATCATTGGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAGCGTGAACTTTTCAAGTGGATTTTGGAAGAGAAGCGCAAGATAAAGCCAAAGGATCGTGAAGAGAAGAAACGCATTGATGAAGAGAAAGCAATTCTCAAAGAGTTCATCCGAGCAAAATCTATCCCTAATTTTTAA MSEEEPPKLYANKPKKAQVKQFQEQHKVRDASSSSPAPPASSNMASPSSSPSAPQPPKESFARRYKFLWPMLLTVNLAVGAYLFMRTKKQDEHVADEEAAPDSAKITKIAAPVVEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKRIDEEKAILKEFIRAKSIPNF Homology
BLAST of Clc09G00630 vs. NCBI nr
Match: XP_038898399.1 (uncharacterized protein LOC120086050 [Benincasa hispida]) HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76 Identity = 169/187 (90.37%), Postives = 172/187 (91.98%), Query Frame = 0
BLAST of Clc09G00630 vs. NCBI nr
Match: XP_022992414.1 (uncharacterized protein LOC111488728 isoform X1 [Cucurbita maxima]) HSP 1 Score: 296.6 bits (758), Expect = 1.5e-76 Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 0
BLAST of Clc09G00630 vs. NCBI nr
Match: XP_022954191.1 (uncharacterized protein LOC111456527 isoform X1 [Cucurbita moschata]) HSP 1 Score: 294.7 bits (753), Expect = 5.6e-76 Identity = 167/184 (90.76%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of Clc09G00630 vs. NCBI nr
Match: XP_023548106.1 (uncharacterized protein LOC111806841 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 293.9 bits (751), Expect = 9.6e-76 Identity = 167/184 (90.76%), Postives = 169/184 (91.85%), Query Frame = 0
BLAST of Clc09G00630 vs. NCBI nr
Match: KAG6575480.1 (hypothetical protein SDJN03_26119, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014023.1 hypothetical protein SDJN02_24194 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75 Identity = 166/182 (91.21%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of Clc09G00630 vs. ExPASy TrEMBL
Match: A0A6J1JXH4 (uncharacterized protein LOC111488728 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488728 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 7.2e-77 Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 0
BLAST of Clc09G00630 vs. ExPASy TrEMBL
Match: A0A6J1GQ86 (uncharacterized protein LOC111456527 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456527 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.7e-76 Identity = 167/184 (90.76%), Postives = 170/184 (92.39%), Query Frame = 0
BLAST of Clc09G00630 vs. ExPASy TrEMBL
Match: A0A0A0KAZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451380 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74 Identity = 160/181 (88.40%), Postives = 166/181 (91.71%), Query Frame = 0
BLAST of Clc09G00630 vs. ExPASy TrEMBL
Match: E5GCA6 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.7e-74 Identity = 162/182 (89.01%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Clc09G00630 vs. ExPASy TrEMBL
Match: A0A1S3CGT4 (uncharacterized protein LOC103500733 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500733 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.7e-74 Identity = 162/182 (89.01%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Clc09G00630 vs. TAIR 10
Match: AT1G55160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 165.2 bits (417), Expect = 4.8e-41 Identity = 107/189 (56.61%), Postives = 130/189 (68.78%), Query Frame = 0
BLAST of Clc09G00630 vs. TAIR 10
Match: AT1G55160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-37 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 0
BLAST of Clc09G00630 vs. TAIR 10
Match: AT1G55160.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 151.8 bits (382), Expect = 5.5e-37 Identity = 107/214 (50.00%), Postives = 131/214 (61.21%), Query Frame = 0
BLAST of Clc09G00630 vs. TAIR 10
Match: AT2G19530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55160.2); Has 461 Blast hits to 346 proteins in 80 species: Archae - 0; Bacteria - 16; Metazoa - 89; Fungi - 28; Plants - 57; Viruses - 0; Other Eukaryotes - 271 (source: NCBI BLink). ) HSP 1 Score: 89.4 bits (220), Expect = 3.3e-18 Identity = 70/180 (38.89%), Postives = 92/180 (51.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|