Clc09G00250 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G00250
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Profilin
Location	ClcChr09: 239752 .. 241219 (-)
RNA-Seq Expression	Clc09G00250
Synteny	Clc09G00250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGGTGATCGCCGTTTTCGATTACGGTTTGTTGTTTATTTGATTCTGTTTTGTTAACAGAAATTTGATCGGATCTGGCCTCATAATGAGCGTTTTGTCTTGTTTTGTTTTATATCGTAATTTCGAATCGCAAGAGGCAAGGAGTGAAACTAGAATTAGAATTAGATGCAGAGTGGCGAGCTCTGTTGTTTGATTTGATTAATTTGAATGGAGATGGAAGCTCGTACGATTAATTCTTCGATGGATTCGTATTAATTATCTGTTGGAGTGATATATATGGATTAAGAGGAATATATGACTTTATTTTTCTTCTTTTCTCGTTGAATTAAACTGATTGGTATCATAATGTCTTCGTTTAAGATCACGAATTCATCGAGCGCAAGGGTTCAATGTTAACGCAAGTTTCTGATTAATAATTTCGTGAAGAATTCCATTCTATCGATGTGATCACTAGTCTTTGAATCGTCATGCCGTATGATTTCATTTTGTTTAGCTAATACCATCTTAGCTCGCTATTATCATTGTGCTCACTACTATGCCGAATAATTTCATTTCGTTTGAATTGAGTTTTGTATCTACTTTTGTCATTATCTTCCAGATTTACACTTTTTCCTATTGATTTTTTTGGTTTTTTTTTTTTTTTTTCTCTTACCAAATACTATTGTTTACAATTGGTGTGTTGTATTAATTAAATTAAATTAGGTTTCATAAATTTTCCATCATTGTTCTAATGAAAGAAAATTGTATGATAAATACTTAAAATTAATAAACTGAAAAACAATGTTGAAGGGTAGTAGTAGTGAGCATTAGATGCAAGTAAAAGTTGTAAAAATAATGTTGGTTTTGGAAAAGATTGGTGAAAAAGAAAATGGTTAGAGGTTAAGGAAAAAGGATTGAAATGTGGTAATGAGTAATGAATGGATGAATGGATGAATGGATGAATGAATGAATGAATGAATGCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGTTGTTCCTAAATCCTAATTAATTCTCTATTTCTTTGCTTTGTTTGTACGTGTGTTATCTCTTAAATTAATACCAAACCAACATGCTTCCATGGATATGATGATAATAATTAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG

mRNA sequence

ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG

Coding sequence (CDS)

ATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG

Protein sequence

MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL

Homology

[Close]

BLAST of Clc09G00250 vs. NCBI nr
Match: XP_022953195.1 (profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >XP_023548906.1 profilin-3 [Cucurbita pepo subsp. pepo] >KAG6575500.1 hypothetical protein SDJN03_26139, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014040.1 hypothetical protein SDJN02_24211, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.2 bits (666), Expect = 4.9e-66
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA+I+GIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. NCBI nr
Match: XP_038899187.1 (profilin-3 [Benincasa hispida])

HSP 1 Score: 260.8 bits (665), Expect = 6.5e-66
Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQSSSFPQFKA EISAIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSSSFPQFKANEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+VVRGKKGAGGITVKKTEKAVIIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. NCBI nr
Match: XP_022150558.1 (profilin-3 [Momordica charantia])

HSP 1 Score: 259.6 bits (662), Expect = 1.4e-65
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFP FK +EISAIMKDLDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           A TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA+IIGIYDEPLTPGQCNMVVE
Sbjct: 61  ALTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKALIIGIYDEPLTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. NCBI nr
Match: XP_022964432.1 (profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 121/131 (92.37%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKAVIIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. NCBI nr
Match: KAG6593495.1 (hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025842.1 hypothetical protein SDJN02_12340 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 120/131 (91.60%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKAVIIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot
Match: Q9M7N0 (Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 5.7e-65
Identity = 112/131 (85.50%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVD+HLMC+I+G+HLT+AAIIGHDGSVWAQSSSFPQFK EE++AIMKD DEPGSL
Sbjct: 1   MSWQTYVDEHLMCDIDGHHLTAAAIIGHDGSVWAQSSSFPQFKPEEVAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A+IIGIYDEPLTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYL+EQ +
Sbjct: 121 RLGDYLLEQGM 131

[Close]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot
Match: Q9LEI8 (Profilin-6 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-64
Identity = 110/131 (83.97%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFPQFK++E++A+MKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A+IIGIYDEPLTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYL++Q L
Sbjct: 121 RLGDYLLDQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot
Match: A4GFC2 (Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.8e-64
Identity = 110/131 (83.97%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+IEG HLT+AA+IGHDGSVWAQS++FPQFK EE++AI+KD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGQHLTAAAVIGHDGSVWAQSATFPQFKPEEVAAIIKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+V+RGKKGAGGITVKKT +A+I GIYDEPLTPGQCN++VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGAGGITVKKTGQALIFGIYDEPLTPGQCNIIVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYL+EQ L
Sbjct: 121 RLGDYLLEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot
Match: Q9M7M9 (Profilin-4 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.3e-64
Identity = 110/131 (83.97%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFPQFK++E++AIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSSFPQFKSDEVAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLG TKYMVIQGEPG+V+RGKKG+GGITVKKT +A+IIGIYDEPLTPGQCNM+VE
Sbjct: 61  APTGLHLGSTKYMVIQGEPGAVIRGKKGSGGITVKKTSQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYL+EQ +
Sbjct: 121 RLGDYLLEQGM 131

[Close]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot
Match: Q9M7M8 (Profilin-5 OS=Hevea brasiliensis OX=3981 PE=1 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 8.2e-64
Identity = 109/131 (83.21%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSS FPQFK++E++A+MKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIDGHRLTAAAIIGHDGSVWAQSSGFPQFKSDEVAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A+IIGIYDEPLTPGQCNM+VE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALIIGIYDEPLTPGQCNMIVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYL+EQ +
Sbjct: 121 RLGDYLLEQGM 131

[Close]

BLAST of Clc09G00250 vs. ExPASy TrEMBL
Match: A0A6J1JVP5 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA+I+GIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy TrEMBL
Match: A0A6J1GNZ3 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 122/131 (93.13%), Postives = 128/131 (97.71%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFPQFK EEISAIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSASFPQFKPEEISAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA+I+GIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLGGTKYMVIQGEPGAVVRGKKGAGGVTVKKTEKAMIVGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy TrEMBL
Match: A0A6J1D9R4 (Profilin OS=Momordica charantia OX=3673 GN=LOC111018668 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.0e-66
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFP FK +EISAIMKDLDEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           A TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA+IIGIYDEPLTPGQCNMVVE
Sbjct: 61  ALTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKALIIGIYDEPLTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy TrEMBL
Match: A0A6J1HHT1 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.5e-65
Identity = 121/131 (92.37%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFPQFK EEI+A+MKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDASVWAQSASFPQFKPEEIAAVMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKAVIIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. ExPASy TrEMBL
Match: A0A6J1KMJ4 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 120/131 (91.60%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC+IEGNHL+SAAIIGHD SVWAQS+SFPQFK EEI+AIMKD DEPGSL
Sbjct: 1   MSWQTYVDDHLMCDIEGNHLSSAAIIGHDASVWAQSASFPQFKPEEIAAIMKDFDEPGSL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKAVIIGIYDEP+TPGQCNMVVE
Sbjct: 61  APTGLHLAGTKYMVIQGEPGAVVRGKKGAGGITVKKTEKAVIIGIYDEPVTPGQCNMVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIEQ L
Sbjct: 121 RLGDYLIEQGL 131

[Close]

BLAST of Clc09G00250 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 221.5 bits (563), Expect = 4.0e-58
Identity = 99/134 (73.88%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEP 60
           MSWQTYVD+HLMC++   +G+HLT+AAI+GHDGSVWAQS++FPQFK +E S IMKD DEP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNM 120
           G LAPTGL + G KYMVIQGEPG+V+RGKKGAGGIT+KKT ++ + GIY+EP+TPGQCNM
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQAL 132
           VVERLGDYL+EQ L
Sbjct: 121 VVERLGDYLLEQGL 134

[Close]

BLAST of Clc09G00250 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 218.0 bits (554), Expect = 4.5e-57
Identity = 98/134 (73.13%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEP 60
           MSWQ YVD+HLMC++   +G+HLT+AAIIGHDGSVWAQS++FPQFK +EI+ IMKD DEP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNM 120
           G LAPTG+ L G KYMVIQGEP +V+RGKKGAGGIT+KKT ++++ G+Y+EP+TPGQCNM
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120

Query: 121 VVERLGDYLIEQAL 132
           VVERLGDYLIEQ L
Sbjct: 121 VVERLGDYLIEQGL 134

[Close]

BLAST of Clc09G00250 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 214.2 bits (544), Expect = 6.5e-56
Identity = 95/131 (72.52%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQ+YVDDHLMC++EGNHLT+AAI+G DGSVWAQS+ FPQ K +EI  I KD +EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGL LGG KYMVIQGE G+V+RGKKG GG+T+KKT +A++ G YDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESEL 131

[Close]

BLAST of Clc09G00250 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-55
Identity = 96/131 (73.28%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQ+YVDDHLMCE+EGNHLT AAI G DGSVWAQSS+FPQ K  EI+ I KD +E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGL LGG KYMV+QGE G+V+RGKKG GG+T+KKT +A++ GIYDEP+T GQCN+VVE
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVVE 120

Query: 121 RLGDYLIEQAL 132
           RLGDYLIE  L
Sbjct: 121 RLGDYLIESGL 131

[Close]

BLAST of Clc09G00250 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 211.5 bits (537), Expect = 4.2e-55
Identity = 95/131 (72.52%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSL 60
           MSWQTYVDDHLMC++ GN LT+AAI+G DGSVWAQS++FPQ K EEI  I  D   PG+L
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVE 120
           APTGL LGG KYMVIQGEP +V+RGKKGAGG+T+KKT  A++ GIYDEP+TPGQCNMVVE
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVE 157

Query: 121 RLGDYLIEQAL 132
            LG+YLIE  L
Sbjct: 158 NLGEYLIESGL 168

The following BLAST results are available for this feature:

BLAST of Clc09G00250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953195.1	4.9e-66	93.13	profilin-3 [Cucurbita moschata] >XP_022992440.1 profilin-3 [Cucurbita maxima] >X...	[more]
XP_038899187.1	6.5e-66	94.66	profilin-3 [Benincasa hispida]	[more]
XP_022150558.1	1.4e-65	95.42	profilin-3 [Momordica charantia]	[more]
XP_022964432.1	9.3e-65	92.37	profilin-3-like [Cucurbita moschata] >XP_023514928.1 profilin-3-like [Cucurbita ...	[more]
KAG6593495.1	2.1e-64	91.60	hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Clc09G00250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N0	5.7e-65	85.50	Profilin-3 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
Q9LEI8	3.7e-64	83.97	Profilin-6 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
A4GFC2	4.8e-64	83.97	Profilin-4 OS=Olea europaea OX=4146 PE=1 SV=1	[more]
Q9M7M9	6.3e-64	83.97	Profilin-4 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]
Q9M7M8	8.2e-64	83.21	Profilin-5 OS=Hevea brasiliensis OX=3981 PE=1 SV=1	[more]

BLAST of Clc09G00250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVP5	2.4e-66	93.13	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111488743 PE=3 SV=1	[more]
A0A6J1GNZ3	2.4e-66	93.13	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111455809 PE=3 SV=1	[more]
A0A6J1D9R4	7.0e-66	95.42	Profilin OS=Momordica charantia OX=3673 GN=LOC111018668 PE=3 SV=1	[more]
A0A6J1HHT1	4.5e-65	92.37	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111464458 PE=3 SV=1	[more]
A0A6J1KMJ4	2.2e-64	91.60	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111494668 PE=3 SV=1	[more]

BLAST of Clc09G00250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29340.1	4.0e-58	73.88	profilin 4	[more]
AT2G19770.1	4.5e-57	73.13	profilin 5	[more]
AT2G19760.1	6.5e-56	72.52	profilin 1	[more]
AT4G29350.1	1.9e-55	73.28	profilin 2	[more]
AT5G56600.1	4.2e-55	72.52	profilin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 104..117 score: 88.83 coord: 27..40 score: 83.25 coord: 52..66 score: 76.61 coord: 1..14 score: 87.66 coord: 84..99 score: 75.0 coord: 117..130 score: 80.0 coord: 71..80 score: 96.73
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 21..30 score: 71.5 coord: 100..113 score: 60.0 coord: 40..60 score: 51.55 coord: 3..12 score: 76.25 coord: 64..78 score: 72.5 coord: 113..130 score: 71.25
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..131 e-value: 1.2E-58 score: 210.9
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..129 e-value: 5.5E-43 score: 146.2
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..131
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..129 e-value: 6.97442E-56 score: 168.658
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..130 e-value: 5.5E-56 score: 190.3
None	No IPR available	PANTHER	PTHR11604:SF29	PROFILIN	coord: 1..131
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G00250.1	Clc09G00250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding