Clc09G00120 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTTTACCCTTCCCTTCATTGTGTTGCAAAAAAACAAAGAAAAGAAAAAACATCTCAATTTTCCATCTCTCTCTCTCTCTCTCTCTCTCTCAAAAATCCAACAAAGAAAAGATTCAGAATCCAACTTCTAACCAATTCAAAATTACAGATCCAAAAATGGATAATAATCTTCCAGTGATAGCAAAAAAGGTTTGGAATTTGGTTCGTGTTGCTTATTTCCTTCTCCGTAAAGGCATCTCCAAGAGCAAACTCGTGCTCGACCTCAATCTCATGATGAAACGTGGCAAAATCGCCGGCAAAGCCATTAGCAATCTCATGTTTCACCACCACTACCACGGCGCCGCTTCCCCTACCTCCACCGCCCTTTCCGCCACTCAACTCCCCTTCCCCGTCGGTGCTGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCTTTCCCTACCCTCCACTTCCCTGGCTTCCACCTTGGCAATGGCAAACGCCGCCGTAACCAAAACCACAACTCCTTCTTCGCCTGTGCTCACGCGCCTGAAACACTTGACGACGATGCCGCTACCGTTAATGCCGTTAAGGCCGTTGTCGAGATTCTTAACAACCACGGAGCCGCGTCCTCACCATCCCCTGTCCCGGCTTCACCAGCTCTCCCAGGATTCGGCCGGACTCCGAGGAGAGTCCGCCAGCTCAGGATAACCGACTCGCCGTTCCCTCTACAAGACGCCAACGCGGATCCATTAGTGGACAAAGCGGCCGATGAATTTATCAGTAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACGGCCGAGGAGAACTGAATTCCGCCGCCGGCGACCGGCTACCGGCTATCTGAACAAGCTGATAATTATATATAGCTTTTTTAGGGGGTTAATTATGTGGCATTGTCGTTGTCTTTAATCACTACACATGTATTAGTTTTTGGAAAGAAAATGGAAATAAAGAGACGACGAGTTGTTTTGTTTTTTTT CCTCTTTACCCTTCCCTTCATTGTGTTGCAAAAAAACAAAGAAAAGAAAAAACATCTCAATTTTCCATCTCTCTCTCTCTCTCTCTCTCTCTCAAAAATCCAACAAAGAAAAGATTCAGAATCCAACTTCTAACCAATTCAAAATTACAGATCCAAAAATGGATAATAATCTTCCAGTGATAGCAAAAAAGGTTTGGAATTTGGTTCGTGTTGCTTATTTCCTTCTCCGTAAAGGCATCTCCAAGAGCAAACTCGTGCTCGACCTCAATCTCATGATGAAACGTGGCAAAATCGCCGGCAAAGCCATTAGCAATCTCATGTTTCACCACCACTACCACGGCGCCGCTTCCCCTACCTCCACCGCCCTTTCCGCCACTCAACTCCCCTTCCCCGTCGGTGCTGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCTTTCCCTACCCTCCACTTCCCTGGCTTCCACCTTGGCAATGGCAAACGCCGCCGTAACCAAAACCACAACTCCTTCTTCGCCTGTGCTCACGCGCCTGAAACACTTGACGACGATGCCGCTACCGTTAATGCCGTTAAGGCCGTTGTCGAGATTCTTAACAACCACGGAGCCGCGTCCTCACCATCCCCTGTCCCGGCTTCACCAGCTCTCCCAGGATTCGGCCGGACTCCGAGGAGAGTCCGCCAGCTCAGGATAACCGACTCGCCGTTCCCTCTACAAGACGCCAACGCGGATCCATTAGTGGACAAAGCGGCCGATGAATTTATCAGTAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACGGCCGAGGAGAACTGAATTCCGCCGCCGGCGACCGGCTACCGGCTATCTGAACAAGCTGATAATTATATATAGCTTTTTTAGGGGGTTAATTATGTGGCATTGTCGTTGTCTTTAATCACTACACATGTATTAGTTTTTGGAAAGAAAATGGAAATAAAGAGACGACGAGTTGTTTTGTTTTTTTT ATGGATAATAATCTTCCAGTGATAGCAAAAAAGGTTTGGAATTTGGTTCGTGTTGCTTATTTCCTTCTCCGTAAAGGCATCTCCAAGAGCAAACTCGTGCTCGACCTCAATCTCATGATGAAACGTGGCAAAATCGCCGGCAAAGCCATTAGCAATCTCATGTTTCACCACCACTACCACGGCGCCGCTTCCCCTACCTCCACCGCCCTTTCCGCCACTCAACTCCCCTTCCCCGTCGGTGCTGACGAGTACGAATTCAGCTGCAGCAATAGCCCCGCTTTCCCTACCCTCCACTTCCCTGGCTTCCACCTTGGCAATGGCAAACGCCGCCGTAACCAAAACCACAACTCCTTCTTCGCCTGTGCTCACGCGCCTGAAACACTTGACGACGATGCCGCTACCGTTAATGCCGTTAAGGCCGTTGTCGAGATTCTTAACAACCACGGAGCCGCGTCCTCACCATCCCCTGTCCCGGCTTCACCAGCTCTCCCAGGATTCGGCCGGACTCCGAGGAGAGTCCGCCAGCTCAGGATAACCGACTCGCCGTTCCCTCTACAAGACGCCAACGCGGATCCATTAGTGGACAAAGCGGCCGATGAATTTATCAGTAGGTTTTACAAGGAGCTCAGGCTCCAAAAAACGGCCGAGGAGAACTGA MDNNLPVIAKKVWNLVRVAYFLLRKGISKSKLVLDLNLMMKRGKIAGKAISNLMFHHHYHGAASPTSTALSATQLPFPVGADEYEFSCSNSPAFPTLHFPGFHLGNGKRRRNQNHNSFFACAHAPETLDDDAATVNAVKAVVEILNNHGAASSPSPVPASPALPGFGRTPRRVRQLRITDSPFPLQDANADPLVDKAADEFISRFYKELRLQKTAEEN Homology
BLAST of Clc09G00120 vs. NCBI nr
Match: XP_023000392.1 (uncharacterized protein LOC111494650 [Cucurbita maxima]) HSP 1 Score: 364.8 bits (935), Expect = 5.3e-97 Identity = 187/220 (85.00%), Postives = 197/220 (89.55%), Query Frame = 0
BLAST of Clc09G00120 vs. NCBI nr
Match: XP_023514516.1 (uncharacterized protein LOC111778773 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91 Identity = 179/215 (83.26%), Postives = 189/215 (87.91%), Query Frame = 0
BLAST of Clc09G00120 vs. NCBI nr
Match: XP_022964083.1 (uncharacterized protein LOC111464220 [Cucurbita moschata]) HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91 Identity = 180/213 (84.51%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of Clc09G00120 vs. NCBI nr
Match: XP_022953927.1 (uncharacterized protein LOC111456334 [Cucurbita moschata]) HSP 1 Score: 307.4 bits (786), Expect = 1.0e-79 Identity = 163/219 (74.43%), Postives = 178/219 (81.28%), Query Frame = 0
BLAST of Clc09G00120 vs. NCBI nr
Match: XP_023548437.1 (uncharacterized protein LOC111807092 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79 Identity = 163/219 (74.43%), Postives = 178/219 (81.28%), Query Frame = 0
BLAST of Clc09G00120 vs. ExPASy TrEMBL
Match: A0A6J1KDI8 (uncharacterized protein LOC111494650 OS=Cucurbita maxima OX=3661 GN=LOC111494650 PE=4 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97 Identity = 187/220 (85.00%), Postives = 197/220 (89.55%), Query Frame = 0
BLAST of Clc09G00120 vs. ExPASy TrEMBL
Match: A0A6J1HJS6 (uncharacterized protein LOC111464220 OS=Cucurbita moschata OX=3662 GN=LOC111464220 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 9.4e-92 Identity = 180/213 (84.51%), Postives = 188/213 (88.26%), Query Frame = 0
BLAST of Clc09G00120 vs. ExPASy TrEMBL
Match: A0A6J1GPL9 (uncharacterized protein LOC111456334 OS=Cucurbita moschata OX=3662 GN=LOC111456334 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 4.9e-80 Identity = 163/219 (74.43%), Postives = 178/219 (81.28%), Query Frame = 0
BLAST of Clc09G00120 vs. ExPASy TrEMBL
Match: A0A6J1JMV1 (uncharacterized protein LOC111488328 OS=Cucurbita maxima OX=3661 GN=LOC111488328 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 9.2e-79 Identity = 161/218 (73.85%), Postives = 176/218 (80.73%), Query Frame = 0
BLAST of Clc09G00120 vs. ExPASy TrEMBL
Match: A0A0A0K800 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452920 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 6.2e-67 Identity = 149/221 (67.42%), Postives = 166/221 (75.11%), Query Frame = 0
BLAST of Clc09G00120 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 163.7 bits (413), Expect = 1.7e-40 Identity = 103/221 (46.61%), Postives = 130/221 (58.82%), Query Frame = 0
BLAST of Clc09G00120 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34 Identity = 100/229 (43.67%), Postives = 132/229 (57.64%), Query Frame = 0
BLAST of Clc09G00120 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19 Identity = 77/220 (35.00%), Postives = 111/220 (50.45%), Query Frame = 0
BLAST of Clc09G00120 vs. TAIR 10
Match: AT4G32860.1 (unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 58/215 (26.98%), Postives = 93/215 (43.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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